Metagenome Family F063457

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063457
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	60 residues
Representative Sequence	VLVSYRLRTTGQVRGFAIVLPADADPHLVPTSAVIKCLADAAGVAPEEIELLDLWAER
Number of Associated Samples	80
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.87 %
% of genes near scaffold ends (potentially truncated)	20.93 %
% of genes from short scaffolds (< 2000 bps)	75.19 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.496 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (20.930 % of family members)
Environment Ontology (ENVO)	Unclassified (45.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.93% β-sheet: 20.93% Coil/Unstructured: 58.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.15.1.1: Ubiquitin-related	d1x1ma1	1x1m	0.63839
d.16.1.5: L-aminoacid/polyamine oxidase	d1seza2	1sez	0.6339
d.355.1.1: RplX-like	d2jxta1	2jxt	0.62252
d.12.1.3: Ribosomal protein S24e	d2v94a1	2v94	0.616
d.16.1.2: PHBH-like	d2voua2	2vou	0.61087

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00574	CLP_protease	12.40
PF16881	LIAS_N	7.75
PF00528	BPD_transp_1	7.75
PF00041	fn3	5.43
PF04392	ABC_sub_bind	4.65
PF01220	DHquinase_II	3.10
PF03724	META	2.33
PF01551	Peptidase_M23	2.33
PF03446	NAD_binding_2	1.55
PF12867	DinB_2	1.55
PF08123	DOT1	1.55
PF00296	Bac_luciferase	1.55
PF07076	DUF1344	1.55
PF04055	Radical_SAM	1.55
PF00346	Complex1_49kDa	0.78
PF00709	Adenylsucc_synt	0.78
PF01663	Phosphodiest	0.78
PF06779	MFS_4	0.78
PF00329	Complex1_30kDa	0.78
PF12911	OppC_N	0.78
PF02518	HATPase_c	0.78
PF01058	Oxidored_q6	0.78
PF00589	Phage_integrase	0.78
PF09900	DUF2127	0.78
PF13510	Fer2_4	0.78
PF00850	Hist_deacetyl	0.78
PF12695	Abhydrolase_5	0.78
PF10589	NADH_4Fe-4S	0.78
PF00496	SBP_bac_5	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	24.81
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	24.81
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	12.40
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.65
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	3.10
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	2.33
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.55
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.55
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.78
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.78
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.78
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.78
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.78
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.78
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.78
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.78
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.50 %
Unclassified	root	N/A	15.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.50 %
Unclassified	root	N/A	15.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.50 %
Unclassified	root	N/A	15.50 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	37.21 %
Unclassified	root	N/A	15.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.40 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.65 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	37.21 %
Unclassified	root	N/A	15.50 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.88 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	3.10 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	37.21 %
Unclassified	root	N/A	15.50 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.88 %
Candidatus Omnitrophus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus	3.10 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.55 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	22.48 %
Unclassified	root	N/A	15.50 %
Candidatus Omnitrophus fodinae	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	2.33 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.48 %
Unclassified	root	N/A	15.50 %
Desulfolunaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfolunaceae	2.33 %
Candidatus Omnitrophus fodinae	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	2.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.48 %
Unclassified	root	N/A	15.50 %
Desulfoluna	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfolunaceae → Desulfoluna	2.33 %
Candidatus Omnitrophus fodinae	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	2.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.48 %
Unclassified	root	N/A	15.50 %
Desulfoluna butyratoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfolunaceae → Desulfoluna → Desulfoluna butyratoxydans	2.33 %
Candidatus Omnitrophus fodinae	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	2.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100509089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1344	Open in IMG/M
3300000559\|F14TC_100633576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	635	Open in IMG/M
3300004268\|Ga0066398_10092557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300004268\|Ga0066398_10203131	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300004281\|Ga0066397_10031354	Not Available	864	Open in IMG/M
3300004281\|Ga0066397_10037858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	818	Open in IMG/M
3300004633\|Ga0066395_10450282	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300004633\|Ga0066395_10459024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300004633\|Ga0066395_10729951	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300005167\|Ga0066672_10254515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1131	Open in IMG/M
3300005172\|Ga0066683_10128282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1550	Open in IMG/M
3300005174\|Ga0066680_10645046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	657	Open in IMG/M
3300005186\|Ga0066676_10004383	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	6402	Open in IMG/M
3300005294\|Ga0065705_10210184	Not Available	1375	Open in IMG/M
3300005295\|Ga0065707_10172899	Not Available	1471	Open in IMG/M
3300005295\|Ga0065707_10985590	Not Available	522	Open in IMG/M
3300005330\|Ga0070690_100776784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300005332\|Ga0066388_100009674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7398	Open in IMG/M
3300005332\|Ga0066388_100202693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2605	Open in IMG/M
3300005332\|Ga0066388_100530307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1810	Open in IMG/M
3300005332\|Ga0066388_101062353	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300005332\|Ga0066388_101540415	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005332\|Ga0066388_102730057	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005332\|Ga0066388_104859738	Not Available	683	Open in IMG/M
3300005445\|Ga0070708_100071090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3132	Open in IMG/M
3300005445\|Ga0070708_100256392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1644	Open in IMG/M
3300005445\|Ga0070708_101245565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	695	Open in IMG/M
3300005446\|Ga0066686_10471001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfolunaceae → Desulfoluna → Desulfoluna butyratoxydans	857	Open in IMG/M
3300005447\|Ga0066689_10964451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfolunaceae → Desulfoluna → Desulfoluna butyratoxydans	526	Open in IMG/M
3300005468\|Ga0070707_100099222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2821	Open in IMG/M
3300005471\|Ga0070698_100043788	All Organisms → cellular organisms → Bacteria	4587	Open in IMG/M
3300005540\|Ga0066697_10492829	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005543\|Ga0070672_101784978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	553	Open in IMG/M
3300005553\|Ga0066695_10209243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1225	Open in IMG/M
3300005554\|Ga0066661_10748171	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	572	Open in IMG/M
3300005557\|Ga0066704_10351203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	989	Open in IMG/M
3300005713\|Ga0066905_100007234	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	4935	Open in IMG/M
3300005713\|Ga0066905_100048245	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300005713\|Ga0066905_100167426	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300005713\|Ga0066905_100483241	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005713\|Ga0066905_100491373	Not Available	1018	Open in IMG/M
3300005713\|Ga0066905_101995053	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005764\|Ga0066903_100981110	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1541	Open in IMG/M
3300005764\|Ga0066903_101174765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1422	Open in IMG/M
3300005983\|Ga0081540_1024642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3486	Open in IMG/M
3300006049\|Ga0075417_10009755	All Organisms → cellular organisms → Bacteria → Proteobacteria	3513	Open in IMG/M
3300006806\|Ga0079220_10902872	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300006847\|Ga0075431_100993381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300006854\|Ga0075425_100074584	All Organisms → cellular organisms → Bacteria → Proteobacteria	3826	Open in IMG/M
3300006854\|Ga0075425_100179893	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300006854\|Ga0075425_100599137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1268	Open in IMG/M
3300006854\|Ga0075425_101614337	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300006854\|Ga0075425_101743436	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006880\|Ga0075429_100349375	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300007255\|Ga0099791_10013026	All Organisms → cellular organisms → Bacteria	3507	Open in IMG/M
3300007255\|Ga0099791_10493814	Not Available	594	Open in IMG/M
3300009012\|Ga0066710_101789361	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300009100\|Ga0075418_12383059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	577	Open in IMG/M
3300009137\|Ga0066709_101793161	Not Available	862	Open in IMG/M
3300010046\|Ga0126384_11342189	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010047\|Ga0126382_11837333	Not Available	571	Open in IMG/M
3300010358\|Ga0126370_10005669	All Organisms → cellular organisms → Bacteria → Proteobacteria	6294	Open in IMG/M
3300010358\|Ga0126370_10691309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	895	Open in IMG/M
3300010360\|Ga0126372_10024709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3634	Open in IMG/M
3300010360\|Ga0126372_10027134	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3513	Open in IMG/M
3300010360\|Ga0126372_10177319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1744	Open in IMG/M
3300010360\|Ga0126372_10757263	All Organisms → cellular organisms → Bacteria → PVC group	956	Open in IMG/M
3300010362\|Ga0126377_10073200	All Organisms → cellular organisms → Bacteria	3055	Open in IMG/M
3300010362\|Ga0126377_12269340	Not Available	619	Open in IMG/M
3300010362\|Ga0126377_12474181	Not Available	595	Open in IMG/M
3300010362\|Ga0126377_12593164	Not Available	582	Open in IMG/M
3300010362\|Ga0126377_12647376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300010366\|Ga0126379_10480878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1310	Open in IMG/M
3300010398\|Ga0126383_10085145	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300010398\|Ga0126383_12162024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfolunaceae → Desulfoluna → Desulfoluna butyratoxydans	643	Open in IMG/M
3300010403\|Ga0134123_10035910	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus → Candidatus Omnitrophus fodinae	3642	Open in IMG/M
3300012203\|Ga0137399_10753327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	820	Open in IMG/M
3300012206\|Ga0137380_10964994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	730	Open in IMG/M
3300012922\|Ga0137394_10523157	Not Available	1007	Open in IMG/M
3300012925\|Ga0137419_10179096	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300012925\|Ga0137419_10514548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	952	Open in IMG/M
3300012930\|Ga0137407_10570537	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300012944\|Ga0137410_11919028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300012948\|Ga0126375_10386684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1006	Open in IMG/M
3300015052\|Ga0137411_1009194	Not Available	1060	Open in IMG/M
3300015241\|Ga0137418_10303081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1335	Open in IMG/M
3300015372\|Ga0132256_100271613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1771	Open in IMG/M
3300015373\|Ga0132257_100102438	All Organisms → cellular organisms → Bacteria → Proteobacteria	3297	Open in IMG/M
3300017966\|Ga0187776_10001049	All Organisms → cellular organisms → Bacteria	13563	Open in IMG/M
3300018468\|Ga0066662_12734241	Not Available	523	Open in IMG/M
3300019789\|Ga0137408_1097175	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300019789\|Ga0137408_1404270	All Organisms → cellular organisms → Bacteria	6719	Open in IMG/M
3300019789\|Ga0137408_1404271	All Organisms → cellular organisms → Bacteria	6751	Open in IMG/M
3300021560\|Ga0126371_11049951	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300021560\|Ga0126371_13626622	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300025910\|Ga0207684_10121496	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300025910\|Ga0207684_10225792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1616	Open in IMG/M
3300025910\|Ga0207684_10566425	Not Available	971	Open in IMG/M
3300025922\|Ga0207646_10843241	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300025940\|Ga0207691_11443067	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	564	Open in IMG/M
3300026075\|Ga0207708_10475702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1044	Open in IMG/M
3300026327\|Ga0209266_1047411	Not Available	2138	Open in IMG/M
3300026343\|Ga0209159_1115357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1144	Open in IMG/M
3300027654\|Ga0209799_1012533	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300027654\|Ga0209799_1048326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	950	Open in IMG/M
3300027873\|Ga0209814_10009145	All Organisms → cellular organisms → Bacteria → Proteobacteria	3882	Open in IMG/M
3300027874\|Ga0209465_10199094	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300027874\|Ga0209465_10444165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300027874\|Ga0209465_10678297	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300028293\|Ga0247662_1039330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300031564\|Ga0318573_10553667	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031720\|Ga0307469_10032506	All Organisms → cellular organisms → Bacteria	3051	Open in IMG/M
3300031720\|Ga0307469_10171770	Not Available	1654	Open in IMG/M
3300031720\|Ga0307469_10182333	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300031720\|Ga0307469_10227290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1481	Open in IMG/M
3300031740\|Ga0307468_100001605	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Omnitrophus	6613	Open in IMG/M
3300031820\|Ga0307473_10022843	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300031820\|Ga0307473_10446106	Not Available	860	Open in IMG/M
3300031820\|Ga0307473_10687573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	717	Open in IMG/M
3300031893\|Ga0318536_10042039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2182	Open in IMG/M
3300032060\|Ga0318505_10296106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300032064\|Ga0318510_10300766	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300032068\|Ga0318553_10270817	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300032174\|Ga0307470_10005888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4817	Open in IMG/M
3300032180\|Ga0307471_100093550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2698	Open in IMG/M
3300032180\|Ga0307471_100447764	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300032180\|Ga0307471_101203102	Not Available	922	Open in IMG/M
3300032770\|Ga0335085_10418140	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300033550\|Ga0247829_10917496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.37%
Host-Associated	Host-Associated	11.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.37%
Plants	Host-Associated → Plants	11.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.59%
Loam	Environmental → Terrestrial → Soil → Loam	30.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005090894	3300000364	Soil	VLVSYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVAPEEIELLDLWNER*
F14TC_1006335761	3300000559	Soil	VLVSYRLRTTGKVVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWGER*
Ga0066398_100925572	3300004268	Tropical Forest Soil	MLVSFRLRTTGQVRGFAIALPPGADPHLVPTSAVIKCISDAAGVPPEQVELLDLWNER*
Ga0066398_102031312	3300004268	Tropical Forest Soil	VLVSYRLRKTGQVRGFAIVLPANADPHLVPTSAVIKCVADASGVPPEEIELLDLWNER*
Ga0066397_100313541	3300004281	Tropical Forest Soil	VLASYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVPPDEI
Ga0066397_100378582	3300004281	Tropical Forest Soil	VLVSYRLRSTGRVLGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0066395_104502822	3300004633	Tropical Forest Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDER*
Ga0066395_104590242	3300004633	Tropical Forest Soil	VLASYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVPPDEIELLDLWNER*
Ga0066395_107299511	3300004633	Tropical Forest Soil	MLVSYRLRTTGQVRGFAIALPPGADPHLVPTSAVIKCISDAAGVPPEQVELLDLWNER*
Ga0066672_102545152	3300005167	Soil	VLVSYRLRTTGRIRGVAIALPVGADPHLVPTSDVIRCLADAAGVAPEEIELLDLWTERKAAAASRDT*
Ga0066683_101282823	3300005172	Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWNER*
Ga0066680_106450462	3300005174	Soil	VNVLVSYRLRTTGRIRGVAIALPVGADPHLVPTSDVIRCLADAAGVAPEEIELLDLWTERKAAAASRDT*
Ga0066676_100043835	3300005186	Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWDER*
Ga0065705_102101841	3300005294	Switchgrass Rhizosphere	VLVSYRLRSTGRVLGCPVALPADADLHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0065707_101728991	3300005295	Switchgrass Rhizosphere	VLVSYRLRSTGRVLGCPVALPADADLHLIPMSAVIKCLADYSGVPPEEIELLDVW
Ga0065707_109855902	3300005295	Switchgrass Rhizosphere	VLVSYRLRTTGKVRGFAIALPEGADPHLVPTSDVIRCLADEAGVAPEEIELLDLWAER*
Ga0070690_1007767841	3300005330	Switchgrass Rhizosphere	VLVSYRIRTTGQVRGYAIALPAGADPHLVPTSAVIKCLADESGVAPEEIELLDLWTEH*
Ga0066388_1000096743	3300005332	Tropical Forest Soil	VLVSYRLRSTGRVMGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0066388_1002026932	3300005332	Tropical Forest Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWGER*
Ga0066388_1005303073	3300005332	Tropical Forest Soil	MLVSYRLRTTGQIRGFAIALPTHADPHLIPRSAVIKCIADEAGVPPEQVELLDLWDEQTL
Ga0066388_1010623532	3300005332	Tropical Forest Soil	VLVSYRLRSTGRVVGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDLWDEK*
Ga0066388_1015404153	3300005332	Tropical Forest Soil	VLVSYRIKATGQVRGYAIALPAGADPHLVPTSAVIKCLADESGLAPEEIELLDLWTEQ*
Ga0066388_1027300572	3300005332	Tropical Forest Soil	VLVSYRLRTTGKVAGCSIALFPGADPHLVPISAVIAGLAKYAGVVPDEIELLDLWLER*
Ga0066388_1048597381	3300005332	Tropical Forest Soil	VLVSYRLRTTGKVVGCPVALPTDADPHLIPMSAVIKCLADYSGVLPEEIELLDVWKEKLAAIGRADQMIE*
Ga0070708_1000710906	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRTTGKVRGFAIALPAGADPHLVPTSDVIRCLAEVAGVAPEEIELLDLWAER*
Ga0070708_1002563923	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRATGKVRGFAIALPAGADPHLVPTSDVIRCLAEVAGVAPEEIELLDLWAER*
Ga0070708_1012455652	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTEGDVLVSYRLRTTGKVRGFAIALPAGADPHLVPTSDVIRCLADEAGVAPEEIELLDLWAET*
Ga0066686_104710012	3300005446	Soil	VLVSYRLRTTGKIVGCPVALPVDADLHLIPISAVIKCLADYSGVAPEEIELLDVWDER*
Ga0066689_109644512	3300005447	Soil	MKETVEVLVSYRLRTTGKIVGCPVALPADADRHLIPISAVIKCLADYSGVAPEEIELLDVWDER*
Ga0070707_1000992223	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRTTGKVRGFAIALPAGADPHLVPTSDVIRCLADEAGVAPEEIELLDLWAET*
Ga0070698_1000437883	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRTTGKVRGFAIALPAGIDPHLVPTSDVIRCLAEVAGVAPEEIELLDLWAER*
Ga0066697_104928293	3300005540	Soil	VLVSYRVRTTGHVRGFAIVLPADADPHLVPTSAVIKCLADASGVTPEEIELLDLWDEK*
Ga0070672_1017849781	3300005543	Miscanthus Rhizosphere	PAGIGETVEVLVSYRLRSTGRVLGCPVALPADADLHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0066695_102092431	3300005553	Soil	HPFRVKETVEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWNER*
Ga0066661_107481711	3300005554	Soil	VNVLVSYRLRTTGQVRGVVIALPVGADPHLVPTSDVIRCLADAAGVAPEEIELLDLWTER
Ga0066704_103512032	3300005557	Soil	VNVLVSYRLRTTGQIRGVAIALPAGADPHLVPTSDVIRGLADKVGVMPEEIELLDLWPER
Ga0066905_1000072346	3300005713	Tropical Forest Soil	VLVSYRLRTTGKVVGCPVALPTDADPHLIPMSSVIKCLADYSGVLPEEIELLDVWNEK*
Ga0066905_1000482453	3300005713	Tropical Forest Soil	VLVSYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLAEASGVAPEEIELLDLWNER*
Ga0066905_1001674263	3300005713	Tropical Forest Soil	YRLRATGQVRGFAIALPADADPHLVPTSAVIKCIADQAGVPPEQVELLDLWDER*
Ga0066905_1004832411	3300005713	Tropical Forest Soil	MLVSFRLRTTGQVRGFAIALPAGADPHLVPTSAVIKCIADQAGVTPEQVELLDLWDER*
Ga0066905_1004913731	3300005713	Tropical Forest Soil	VLVSYRLRSTGRVTGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0066905_1019950532	3300005713	Tropical Forest Soil	PQLGVPRARRREARRDQGILVDVLVSYRLRKTGQVRGFAIVLPANADPHLVPTSAVIKCVADASGVPPEEIELLDLWNER*
Ga0066903_1009811103	3300005764	Tropical Forest Soil	VLVSYRLRTTGKVVGCPVALPTDADPHLIPMTAVIKCLADYSGVLPEEIELLDVWKEKLAAIGRADQMIE*
Ga0066903_1011747652	3300005764	Tropical Forest Soil	VLVSYRLRSTGRVLGCPVALPEDADPHLIPMSAVIKCLAEYSGVPPEEIELLDVWGER*
Ga0081540_10246423	3300005983	Tabebuia Heterophylla Rhizosphere	VLVSFRLRTTGQVRGFALALAKGADAHLVPTSAVIKCLADASGVSPEEIELLDVWHEQ*
Ga0075417_100097553	3300006049	Populus Rhizosphere	VLVSFRLRTTGHVRGFALALAKGADAHLVPTSAVIKCLADASGVSPEEIELLDVWDEQ*
Ga0079220_109028722	3300006806	Agricultural Soil	VLVSYRIRTTGQVRGYPIALPAGADPHLVPTSAVIKCLADESGVAPEEIELLDLWTEH*
Ga0075431_1009933812	3300006847	Populus Rhizosphere	VLVSFRLRTTGHVRGFALALAEGADAHLVPTSAVIKCLADASGVSPEEIELLDVWDEQ*
Ga0075425_1000745846	3300006854	Populus Rhizosphere	VLVSYRIRTTGQVRGYAIALPAGADPHLVPTSAVIKCLADESGVAPEEIELLDLWTEQ*
Ga0075425_1001798934	3300006854	Populus Rhizosphere	VLVSYRIRATGQVRGYAIALPAGADPHLVPTSAVIKCLADESGVAPEEIELLDLWTEQ*
Ga0075425_1005991372	3300006854	Populus Rhizosphere	VLVSYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVAPEEIELLDMWNER*
Ga0075425_1016143371	3300006854	Populus Rhizosphere	VLVSYRLRTTGKVRGFAIALPAGADPHLVPTSDVIRCLADEAGVAPEEIELLDLWAAT*
Ga0075425_1017434362	3300006854	Populus Rhizosphere	VLVSYRLRTTGQVRGFALALPAGADAHLVPTSAVIKCLADAAGVAPEDIELLDLWDER*
Ga0075429_1003493753	3300006880	Populus Rhizosphere	VKEGDLLVSYRLRTTGKVRGFAIALPEGADPHLVPTSDVIRCLADEAGVAPEEIELLDLWAER*
Ga0099791_100130265	3300007255	Vadose Zone Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVTPEEIELLDVWDER*
Ga0099791_104938141	3300007255	Vadose Zone Soil	VLVSYRLRTTGQIRGFAIALPANADPHLVPTSAVIKCLADQAGVAPEEIELLDLWAER*
Ga0066710_1017893613	3300009012	Grasslands Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWDEK
Ga0075418_123830591	3300009100	Populus Rhizosphere	PAGIGETVEVLVSYRLRSTGRVLGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0066709_1017931613	3300009137	Grasslands Soil	VEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPE
Ga0126384_113421892	3300010046	Tropical Forest Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADAAGVPPEQVELLDLWDER*
Ga0126382_118373331	3300010047	Tropical Forest Soil	VLVSYRLRSTGRVVGCPVALPADADRHLIPMSSVIKCLADYSGVPPEEIELLDMWDEK*
Ga0126370_100056696	3300010358	Tropical Forest Soil	MLVSFRLRTTGQVRGFAIALPPGADPHLVPTSAVIKCISDVAGVPPEQVELLDLWNER*
Ga0126370_106913091	3300010358	Tropical Forest Soil	VLVSYRLRSTGRVMGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDLWDEK*
Ga0126372_100247093	3300010360	Tropical Forest Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEASVPPEQVELLDLWDER*
Ga0126372_100271344	3300010360	Tropical Forest Soil	MLVSFRLRTTGQVRGFAIALPPDADPHLVPTSAVIKCISDAAGVPPEQVELLDLWNER*
Ga0126372_101773195	3300010360	Tropical Forest Soil	VLVSYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCVADASGVAPDEIELLDLWNER*
Ga0126372_107572631	3300010360	Tropical Forest Soil	VLVSYRLRTTGKVVGCPVALPTDADPHLIPMSSVIKCLADYSGVLPEEIELLDVWKEKLAAIGRADQMIE*
Ga0126377_100732005	3300010362	Tropical Forest Soil	VLVSYRLRSTGRVLGCPVALPADADRHLIPISAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0126377_122693401	3300010362	Tropical Forest Soil	VLVSYRLRSTGRVLGCPVALPADADPHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0126377_124741812	3300010362	Tropical Forest Soil	VEVLVSYRLRSTGRVSGCPVALPADADPHLIPMSAVIQCLADYSGVPPEEIELLDVWDEK
Ga0126377_125931641	3300010362	Tropical Forest Soil	VLVSYRLRSTGRVTGCPVALPADADRHLIPMSAVIKCLADYSGVAPEEIELLDVWDEK*
Ga0126377_126473762	3300010362	Tropical Forest Soil	MLVSYRLRATGQVRGFAIALPADADPHLVPTSAVIKCIADQAGVPPEQVELLDLWDER*
Ga0126379_104808782	3300010366	Tropical Forest Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDKR*
Ga0126383_100851452	3300010398	Tropical Forest Soil	MLVSFRLRTTGQVRGFAIALPAGADPHLVPTSAVIKCIADQAGVTPEQVELLDLWNER*
Ga0126383_121620241	3300010398	Tropical Forest Soil	VLVSYRLRSTGRVVGCPVALPADADRHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0134123_100359106	3300010403	Terrestrial Soil	VLVSYRLRSTGRVLGCPVALPADADLHLIPMSAVIKCLADYSGVPPEEIELLDVWGEK*
Ga0137399_107533271	3300012203	Vadose Zone Soil	VLVSYRLRTTGQIRGFAIALPANADPHLVPTSAVIKCLADQAGVAPEEIELL
Ga0137380_109649943	3300012206	Vadose Zone Soil	TGKVSGFPVAIPAGVDPHLVQTSDVIACLAGVAGVAPEEIELLDLWTKTQAVENS*
Ga0137394_105231573	3300012922	Vadose Zone Soil	MVSEDHARHQPRGIKETVEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEE
Ga0137419_101790963	3300012925	Vadose Zone Soil	MVSEDHARHQARGIKETVEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWYER*
Ga0137419_105145482	3300012925	Vadose Zone Soil	VTEHVVLVSYRLRTTGKISGCPVALLTGVDPHLVPIRDVIAFLAAEAGVAPEEIELLDLWSER*
Ga0137407_105705371	3300012930	Vadose Zone Soil	VTEHVVLVSYRLRTTGKISGCPVALLAGADPHLVPIRDVIAFLAAEAGVAPEEIEVLDLWSER*
Ga0137410_119190282	3300012944	Vadose Zone Soil	VTEHVVLVSYRLRTTGKISGCPVALLAGADPHLVPIRDVIAFLAAEAGVAPEEIELLDLW
Ga0126375_103866841	3300012948	Tropical Forest Soil	SLVDVLASYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVPPDEIELLDLWNER*
Ga0137411_10091943	3300015052	Vadose Zone Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEI
Ga0137418_103030814	3300015241	Vadose Zone Soil	VTEHVVLVSYRLRTTGKISGCPVALVAGADPHHVPIRDIIAFLAAEADVAPEEIELLDLWSER*
Ga0132256_1002716132	3300015372	Arabidopsis Rhizosphere	VLVSYRLRSTGRVLGCPVSLPADADPHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK*
Ga0132257_1001024384	3300015373	Arabidopsis Rhizosphere	VLVSYRIKATGQVRGYAIALPAGADPHLVPTSAVIKCLADESGVAPEEIELLDLWTEQ*
Ga0187776_1000104917	3300017966	Tropical Peatland	VLVSYRIRTTGQVRGFAIALPAGADPHLVPTSAVVKCLADESGVTPEEIELLDLWSER
Ga0066662_127342411	3300018468	Grasslands Soil	VNVLVSYRLRTTGRIRGVAIALPVGADPHLVPTSDVIRCLADAAGVAPEEIELLDLWTERKAAAASRDT
Ga0137408_10971751	3300019789	Vadose Zone Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWDER
Ga0137408_14042701	3300019789	Vadose Zone Soil	SFRTETVEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWDER
Ga0137408_140427110	3300019789	Vadose Zone Soil	PAALHARHLPRGVKETVEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWDER
Ga0126371_110499511	3300021560	Tropical Forest Soil	MLVSYRLRTTGQVRGFAIALPPGADPHLVPSSAVIKCVSDAAGVPPEQVELLDLWNER
Ga0126371_136266222	3300021560	Tropical Forest Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDER
Ga0207684_101214962	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRTTGKVRGFAIALPAGADPHLVPTSDVIRCLADEAGVAPEEIELLDLWAET
Ga0207684_102257922	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LASFSGAGGWKEGDVLVSYRLRTTGKVRGFAIALPAGADPHLVPTSDVIRCLAEVAGVAPEEIELLDLWAER
Ga0207684_105664252	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VNVLVSYRRRTTGQVRGVAITLPVGADPHLVPTSDVIRALADALGVVPEEIELLDLWAPR
Ga0207646_108432411	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRATGKVRGFAIALPAGADPHLVPTSDVIRCLAEVAGVAPEEIELLDLWAER
Ga0207691_114430672	3300025940	Miscanthus Rhizosphere	LREPAGIGETVEVLVSYRLRSTGRVLGCPVALPADADLHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK
Ga0207708_104757021	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VLVSYRLRSTGRVLGCPVALPADADLHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK
Ga0209266_10474112	3300026327	Soil	VLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWNER
Ga0209159_11153571	3300026343	Soil	HPFRVKETVEVLVSYRLRTTGKIVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWNER
Ga0209799_10125333	3300027654	Tropical Forest Soil	VLVSYRLRKTGQVRGFAIVLPANADPHLVPTSAVIKCVADASGVPPEEIELLDLWNER
Ga0209799_10483262	3300027654	Tropical Forest Soil	MLVSFRLRTTGQVRGFAIALPPGADPHLVPTSAVIKCISDAAGVPPEQVELLDLWNER
Ga0209814_100091456	3300027873	Populus Rhizosphere	VLVSFRLRTTGHVRGFALALAKGADAHLVPTSAVIKCLADASGVSPEEIELLDVWDEQ
Ga0209465_101990942	3300027874	Tropical Forest Soil	VLVSYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVPPDEIELLDLWNER
Ga0209465_104441652	3300027874	Tropical Forest Soil	MLVSYRLRTTGQVRGFAIALPPGADPHLVPTSAVIKCISDAAGVPPEQVELLDLWNER
Ga0209465_106782972	3300027874	Tropical Forest Soil	MLVSFRLRATGQIRGFAIALPPSADPHLVPTSAVIKCIADAAGVPPEQVELLDLWDER
Ga0247662_10393302	3300028293	Soil	VLVSYRIRTTGQVRGYAIALPAGADPHLVPTSAVIKCLADESGVAPEEIELLDLWTEH
Ga0318573_105536672	3300031564	Soil	MWSASREELNCPMLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDER
Ga0307469_100325065	3300031720	Hardwood Forest Soil	VLVSYRLRTTGKVVGCPVALPADADPHHIPMSAVIKCLADYSGVPPEEIELLDVWDEKSWRQARA
Ga0307469_101717703	3300031720	Hardwood Forest Soil	VLVSYRLRTTGRVVGCPVALPADADPHLIPMSAVIKCLADYSGVAPEEIELLDMWDEK
Ga0307469_101823333	3300031720	Hardwood Forest Soil	VLVSYRLRTTGQIRGFAIALPANADPHLVPTSAVIKCLADQAGVAPEEIELLDLWAER
Ga0307469_102272902	3300031720	Hardwood Forest Soil	VLVSYRLRTTGKVVGCPVALPADADRHLIPISAVIKCLAEYSGVAPEEIELLDVWDER
Ga0307468_1000016051	3300031740	Hardwood Forest Soil	ETVEVLVSYRLRSTGRVLGCPVALPADADPHLIPMSAVIKCLADYSGVPPEEIELLDVWGEK
Ga0307473_100228433	3300031820	Hardwood Forest Soil	VLVSYRLRKTGQVRGFAIVLPADADPHLVPTSAVIKCLADASGVAPEEIELLDLWNER
Ga0307473_104461063	3300031820	Hardwood Forest Soil	VLVSYRLRSTGRVLGCPVSLPADADPHLIPMSAVIKCLADYSGVPPEEIELLDVWDEK
Ga0307473_106875732	3300031820	Hardwood Forest Soil	MLHARHQPRGVKETVEVLVSYRLRTTGKVVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWGER
Ga0318536_100420394	3300031893	Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVE
Ga0318505_102961061	3300032060	Soil	MLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDE
Ga0318510_103007662	3300032064	Soil	TTMWSASREELNCPMLVSFRLRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDER
Ga0318553_102708171	3300032068	Soil	LRTTGQIRGFAIALPAGADPHLVPTSAVIKCIADEAGVPPEQVELLDLWDER
Ga0307470_100058884	3300032174	Hardwood Forest Soil	VLVSYRLRSTGRVLGCPVALPADADPHLIPMSAVIKCLADYSGVPPEEIELLDVWGEK
Ga0307471_1000935503	3300032180	Hardwood Forest Soil	VLVSYRLRTTGQVRGFAIVLPADADPHLVPTSAVIKCLADAAGVAPEEIELLDLWAER
Ga0307471_1004477641	3300032180	Hardwood Forest Soil	RRREARRDQGIIVDVLVSYRLRKTGQVRGFAIVLPADADPHLLPTSAVIKCLADASGVAPEEIELLDLWNER
Ga0307471_1012031021	3300032180	Hardwood Forest Soil	VLVSYRLRTTGKVVGCPVALPADADLHLIPISAVIKCLADYSGVAPEEIELLDVWGEG
Ga0335085_104181403	3300032770	Soil	VLVSYRIKATGQVRGYAIALPAGADPHLVPTSAVIKCLADESGLAPEEIELLDLWTEQ
Ga0247829_109174961	3300033550	Soil	RSTGRVLGCPVALPADADPHLIPMSAVIKCLADYSGVPPEEIELLDVWGEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063457

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences