Metagenome / Metatranscriptome Family F063456

Basic Information
Family ID	F063456
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	46 residues
Representative Sequence	TVWRKFASNLVDAQPLPTGHYLQEEAPDRVYDHFVKFFTA
Number of Associated Samples	100
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.75 %
% of genes near scaffold ends (potentially truncated)	91.47 %
% of genes from short scaffolds (< 2000 bps)	95.35 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Bacteria (83.721 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.380 % of family members)
Environment Ontology (ENVO)	Unclassified (28.682 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.016 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.88% β-sheet: 0.00% Coil/Unstructured: 69.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13620	CarboxypepD_reg	5.43
PF03401	TctC	4.65
PF08448	PAS_4	3.10
PF13458	Peripla_BP_6	2.33
PF00106	adh_short	1.55
PF01738	DLH	1.55
PF00355	Rieske	1.55
PF00296	Bac_luciferase	0.78
PF00561	Abhydrolase_1	0.78
PF13533	Biotin_lipoyl_2	0.78
PF14534	DUF4440	0.78
PF00691	OmpA	0.78
PF13508	Acetyltransf_7	0.78
PF12681	Glyoxalase_2	0.78
PF13649	Methyltransf_25	0.78
PF02738	MoCoBD_1	0.78
PF03928	HbpS-like	0.78
PF04545	Sigma70_r4	0.78
PF09587	PGA_cap	0.78
PF06439	3keto-disac_hyd	0.78
PF04909	Amidohydro_2	0.78
PF08681	DUF1778	0.78
PF05096	Glu_cyclase_2	0.78
PF02371	Transposase_20	0.78
PF00135	COesterase	0.78
PF00011	HSP20	0.78
PF12796	Ank_2	0.78
PF01636	APH	0.78
PF00903	Glyoxalase	0.78
PF09903	DUF2130	0.78
PF00581	Rhodanese	0.78
PF04392	ABC_sub_bind	0.78
PF01555	N6_N4_Mtase	0.78
PF00756	Esterase	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.65
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.78
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.78
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.72 %
Unclassified	root	N/A	16.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.72 %
Unclassified	root	N/A	16.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.72 %
Unclassified	root	N/A	16.28 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.71 %
Unclassified	root	N/A	16.28 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.93 %
Unclassified	root	N/A	16.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.93 %
Unclassified	root	N/A	16.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.93 %
Unclassified	root	N/A	16.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.55 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.78 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.78 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.78 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.93 %
Unclassified	root	N/A	16.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.78 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.78 %
Rubellimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium	0.78 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.78 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.93 %
Unclassified	root	N/A	16.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.78 %
Methylocystis hirsuta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	0.78 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	0.78 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.78 %
Rubellimicrobium rubrum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium rubrum	0.78 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.78 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.78 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.93 %
Unclassified	root	N/A	16.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.78 %
Methylobacterium sp. 17Sr1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 17Sr1-1	0.78 %
Methylocystis hirsuta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	0.78 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	0.78 %
Rubellimicrobium rubrum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium rubrum	0.78 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.78 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.78 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12296337	Not Available	528	Open in IMG/M
3300003321\|soilH1_10168396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1096	Open in IMG/M
3300004024\|Ga0055436_10200813	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300004082\|Ga0062384_101022566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	592	Open in IMG/M
3300004092\|Ga0062389_102193293	Not Available	726	Open in IMG/M
3300004103\|Ga0058903_1488429	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300004633\|Ga0066395_10438615	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300005332\|Ga0066388_100742110	All Organisms → cellular organisms → Bacteria → Proteobacteria	1583	Open in IMG/M
3300005332\|Ga0066388_105305745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	654	Open in IMG/M
3300005332\|Ga0066388_107513111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300005354\|Ga0070675_100574327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1021	Open in IMG/M
3300005439\|Ga0070711_100731587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	835	Open in IMG/M
3300005535\|Ga0070684_102136118	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005598\|Ga0066706_11479001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005615\|Ga0070702_101033840	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300005618\|Ga0068864_102706058	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300005764\|Ga0066903_101196908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1410	Open in IMG/M
3300005764\|Ga0066903_104267320	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300005764\|Ga0066903_105810139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300005764\|Ga0066903_107582661	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300006034\|Ga0066656_10943358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	553	Open in IMG/M
3300006052\|Ga0075029_101118450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300006806\|Ga0079220_11264764	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300009012\|Ga0066710_101811698	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300009090\|Ga0099827_10497458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1047	Open in IMG/M
3300009143\|Ga0099792_10521314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	747	Open in IMG/M
3300009524\|Ga0116225_1347538	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300009633\|Ga0116129_1060546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1148	Open in IMG/M
3300009792\|Ga0126374_10597281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300009826\|Ga0123355_11625065	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300010043\|Ga0126380_11413013	Not Available	612	Open in IMG/M
3300010043\|Ga0126380_11998662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010046\|Ga0126384_10931087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300010046\|Ga0126384_11366316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010047\|Ga0126382_12082847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010048\|Ga0126373_13158115	Not Available	513	Open in IMG/M
3300010358\|Ga0126370_12082550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	556	Open in IMG/M
3300010359\|Ga0126376_12047988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300010362\|Ga0126377_12848035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium rubrum	558	Open in IMG/M
3300010366\|Ga0126379_10565423	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1218	Open in IMG/M
3300010366\|Ga0126379_12434759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	623	Open in IMG/M
3300010373\|Ga0134128_12613831	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300010379\|Ga0136449_100794923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1564	Open in IMG/M
3300010398\|Ga0126383_12617347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300010876\|Ga0126361_10735520	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300011269\|Ga0137392_11118916	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012081\|Ga0154003_1058296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	660	Open in IMG/M
3300012199\|Ga0137383_11285216	Not Available	522	Open in IMG/M
3300012199\|Ga0137383_11325948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012202\|Ga0137363_10067875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2614	Open in IMG/M
3300012202\|Ga0137363_11659276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012208\|Ga0137376_11158732	Not Available	661	Open in IMG/M
3300012212\|Ga0150985_106177511	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300012231\|Ga0137465_1056035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300012357\|Ga0137384_11280545	Not Available	579	Open in IMG/M
3300012469\|Ga0150984_116220459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300012924\|Ga0137413_10773293	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300012929\|Ga0137404_10757229	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012944\|Ga0137410_11242127	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012944\|Ga0137410_11833082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis hirsuta	536	Open in IMG/M
3300012971\|Ga0126369_13647273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300014166\|Ga0134079_10066126	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300014325\|Ga0163163_12685050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300014968\|Ga0157379_11416200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 17Sr1-1	674	Open in IMG/M
3300016319\|Ga0182033_12080476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300016357\|Ga0182032_10324934	Not Available	1223	Open in IMG/M
3300016371\|Ga0182034_10144789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1776	Open in IMG/M
3300016371\|Ga0182034_10369831	Not Available	1169	Open in IMG/M
3300016404\|Ga0182037_10288894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300016404\|Ga0182037_11165061	Not Available	676	Open in IMG/M
3300016404\|Ga0182037_11358056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300016404\|Ga0182037_12086062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300017973\|Ga0187780_10449606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300018059\|Ga0184615_10620491	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300018060\|Ga0187765_10940417	Not Available	588	Open in IMG/M
3300020579\|Ga0210407_11077892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300021088\|Ga0210404_10684245	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300021178\|Ga0210408_10325510	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300021178\|Ga0210408_10893425	Not Available	692	Open in IMG/M
3300021432\|Ga0210384_11118729	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300021478\|Ga0210402_10172066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300021478\|Ga0210402_10195944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1855	Open in IMG/M
3300021478\|Ga0210402_10262239	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300021479\|Ga0210410_10897043	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300022726\|Ga0242654_10190346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300022726\|Ga0242654_10418809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025916\|Ga0207663_10628659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300025921\|Ga0207652_10291376	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300025926\|Ga0207659_10090613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2283	Open in IMG/M
3300026340\|Ga0257162_1025799	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300027663\|Ga0208990_1089043	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300027846\|Ga0209180_10131973	Not Available	1435	Open in IMG/M
3300027855\|Ga0209693_10290072	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300027889\|Ga0209380_10200148	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300027898\|Ga0209067_10038432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2438	Open in IMG/M
3300028906\|Ga0308309_10521757	Not Available	1028	Open in IMG/M
3300029636\|Ga0222749_10084425	Not Available	1466	Open in IMG/M
3300029636\|Ga0222749_10522804	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031184\|Ga0307499_10031376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300031344\|Ga0265316_10282721	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300031474\|Ga0170818_104068425	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031715\|Ga0307476_10513503	Not Available	888	Open in IMG/M
3300031723\|Ga0318493_10427274	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300031770\|Ga0318521_10548900	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031771\|Ga0318546_10712448	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031781\|Ga0318547_10769083	Not Available	600	Open in IMG/M
3300031879\|Ga0306919_11314449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300031890\|Ga0306925_11782782	Not Available	590	Open in IMG/M
3300031893\|Ga0318536_10675619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031910\|Ga0306923_10247260	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300031910\|Ga0306923_10558760	Not Available	1289	Open in IMG/M
3300031910\|Ga0306923_11090959	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031910\|Ga0306923_11103917	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300031912\|Ga0306921_10247538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2088	Open in IMG/M
3300031912\|Ga0306921_12614156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031912\|Ga0306921_12654804	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031941\|Ga0310912_10298842	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300031945\|Ga0310913_10299279	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031947\|Ga0310909_10174293	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300031947\|Ga0310909_10379899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1186	Open in IMG/M
3300031954\|Ga0306926_10907123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300032001\|Ga0306922_11609253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300032001\|Ga0306922_12402567	Not Available	503	Open in IMG/M
3300032059\|Ga0318533_10386124	Not Available	1022	Open in IMG/M
3300032060\|Ga0318505_10571636	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300032160\|Ga0311301_10140207	All Organisms → cellular organisms → Bacteria → Proteobacteria	4434	Open in IMG/M
3300032160\|Ga0311301_10468664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1886	Open in IMG/M
3300032261\|Ga0306920_102335018	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300032261\|Ga0306920_103208931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.25%
Host-Associated	Host-Associated	7.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.05%
Aquatic	Environmental → Aquatic	6.20%
Plants	Host-Associated → Plants	6.20%
Arthropoda	Host-Associated → Arthropoda	0.78%
Fungi	Host-Associated → Fungi	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.05%
Sediment	Environmental → Aquatic → Sediment	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.88%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%
Marine	Environmental → Aquatic → Marine	0.78%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Mycelium	Host-Associated → Fungi → Mycelium	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Loam	Environmental → Terrestrial → Soil → Loam	13.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_122963371	3300000789	Soil	RRFASNLVDAQPFPTGHYLQEEAPDRVYDYFVKFFTA*
soilH1_101683961	3300003321	Sugarcane Root And Bulk Soil	TVWRKYASNLVDIQPLPSGHYIQEEQPDQVYDRCIRFFTA*
Ga0055436_102008132	3300004024	Natural And Restored Wetlands	PLLVLWGTRGAPPTQEYPTVWRRFASNLIDAQPLPTGHALQVEAPTRVYDHFIKFFTA*
Ga0062384_1010225662	3300004082	Bog Forest Soil	RGAPPTQEYPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHLLKFFTT*
Ga0062389_1021932931	3300004092	Bog Forest Soil	QEYPTVWRRFASNLVDAQPLPTGHAPQVEAPDRVYDHFIKFFTA*
Ga0058903_14884291	3300004103	Forest Soil	PTVWRKFASNLVDAQPLPTGHYLQEEAPDRVYDYFIKFFTT*
Ga0066395_104386152	3300004633	Tropical Forest Soil	VWRKFASNLVDAQPLPTGHYLQEEAPDLVYDHFVKFFTT*
Ga0066388_1007421103	3300005332	Tropical Forest Soil	GAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPGRVYDHFIKFFTA*
Ga0066388_1053057452	3300005332	Tropical Forest Soil	VWRKFASNLVDAQPLPTRHYPQEEVPDRVIEHFLKFFTA*
Ga0066388_1075131112	3300005332	Tropical Forest Soil	PTVWRKFASNLVDAQPLPTGHYLQEEAPDRVIDHFVKFFTT*
Ga0070675_1005743272	3300005354	Miscanthus Rhizosphere	GTRGQPPTQEYPTVWRKYASNLVDIQPLPSGHYIQEEQPDQVYDHCIRFFTA*
Ga0070711_1007315871	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QEYPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHCLKFFTT*
Ga0070684_1021361182	3300005535	Corn Rhizosphere	TVWRKWARNLVDIQPVPAGHYIQEELPDQVYDHCIRFFTA*
Ga0066706_114790011	3300005598	Soil	GAPPTQEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVYDYFVKFFTA*
Ga0070702_1010338401	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VLWGTRGQPPTQEFPTVWRKFAKNLVDAQPLPTGHYLQEEAPDQVYDYFVKFLVT*
Ga0068864_1027060582	3300005618	Switchgrass Rhizosphere	YASNLVGAYPLPTGHYLQEEAPDQCYDHFMKFFTT*
Ga0066903_1011969081	3300005764	Tropical Forest Soil	FASNLVDAQPLPTGHYLQEEAPDRVIDHFVKFFTT*
Ga0066903_1042673201	3300005764	Tropical Forest Soil	RKFASNLVDAQPLPTGHYLQEEAPDLVYDHFVKFFTT*
Ga0066903_1058101391	3300005764	Tropical Forest Soil	PLLLLWGTRGAPPTQEYPTVWRRYATNLVDAQPLPTGHALQVEAPDRVYDHFVKFFRA*
Ga0066903_1075826612	3300005764	Tropical Forest Soil	PTQEYPTVWSKFASNLVDAQPLPTGHYLMEEAPDRLIEHFFKFFTA*
Ga0066656_109433581	3300006034	Soil	GTRGQPPTQEFPTVWRKFAKNLVDAQPLPTGHYLQEEAPDKVLDYFVKFFTA*
Ga0075029_1011184502	3300006052	Watersheds	GAPPTQEFPTVWRKYASNLVDAQPLPTGHYLQEEAPDRVYDYFVKFFTT*
Ga0079220_112647641	3300006806	Agricultural Soil	TVWRKFAKNLVDAQPLPTGHYLQEEAPDQVYDYFVKFFTT*
Ga0066710_1018116982	3300009012	Grasslands Soil	MPPTQEYPTVWRKFASNLVDAQSLPTGHVLQAEAPDRVY
Ga0099827_104974581	3300009090	Vadose Zone Soil	EFPTVWRKFAKNLVDAQPLPTGHYLQEEAPDQVYDYFVKFLTT*
Ga0099792_105213142	3300009143	Vadose Zone Soil	PPTQEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDRVIDYFLKFFTA*
Ga0116225_13475382	3300009524	Peatlands Soil	VWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHCLKFFTT*
Ga0116129_10605461	3300009633	Peatland	TVWRKFASNLVDAQPLPTGHYLQEEAPDRVYDHFVKFFTA*
Ga0126374_105972812	3300009792	Tropical Forest Soil	GTRGAPPTQEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDLVYDHFVKFFTT*
Ga0123355_116250652	3300009826	Termite Gut	KFASNLVDAQPLPTGHALQVEAPERVYDHFVKFFRA*
Ga0126380_114130132	3300010043	Tropical Forest Soil	TVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTA*
Ga0126380_119986621	3300010043	Tropical Forest Soil	RGAPPTQEYPTVWRKFASTLVDAQPLPTGHYLQEEAPDQVIDHFVKFFTT*
Ga0126384_109310872	3300010046	Tropical Forest Soil	MPLPILWATRGAPPTQEYPTVWRKFASNLVDSQPLPPDRVIEHFFKFQYAGKALK*
Ga0126384_113663161	3300010046	Tropical Forest Soil	QEFPTVWRKFAKNLVDAQPLPTGHYLQEEAPDKVYDYFVKFFTA*
Ga0126382_120828471	3300010047	Tropical Forest Soil	PTQEFPTVWRKFAKNLVDAQPLPTGHYLQEEAPDKVYDYFVKFFTT*
Ga0126373_131581151	3300010048	Tropical Forest Soil	GRPPTQEYPNAWRQFASNLVDAQPLPTGHALQVEAPNAVYDHFVKFFAA*
Ga0126370_120825501	3300010358	Tropical Forest Soil	ESPTVWRKFASNLVDAQPLPTGHYLQEEAPDRVIDHFVKFFTT*
Ga0126376_120479881	3300010359	Tropical Forest Soil	TQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFVSFFRA*
Ga0126377_128480352	3300010362	Tropical Forest Soil	GLPPTQEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDRVIDHFVKFFTA*
Ga0126379_105654231	3300010366	Tropical Forest Soil	VLWGTRGRPPTQEYPNAWRQFASNLVDAQPLPTGHALQVEAPNAVYDHFVKFFAA*
Ga0126379_124347591	3300010366	Tropical Forest Soil	GMPPTQEYPTVWRKFASNLVDAQPLPTGHALQAEAPDRVYDHFVKFFRA*
Ga0134128_126138311	3300010373	Terrestrial Soil	FASNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTA*
Ga0136449_1007949231	3300010379	Peatlands Soil	TQEYPTVWRRYASNLVDAQPLPTGHAVQVEAPDGVYYHFVKFFRA*
Ga0126383_126173471	3300010398	Tropical Forest Soil	VWRKFASNLVDAQPLPTGHYLQEEAPDRVIEHLLKFFTA*
Ga0126361_107355201	3300010876	Boreal Forest Soil	RGAPPTQEFPTVWRKYASNLVDAQPLPTGHYLQEEAPDRVYDHFVKFFTT*
Ga0137392_111189161	3300011269	Vadose Zone Soil	PPSEEYPAVWRKFASNLVDAQPLPTGHYMQEEAPDQVYDHFVKFFTA*
Ga0154003_10582961	3300012081	Attine Ant Fungus Gardens	TVWRKFAKNLVDAQPLPTGHYLQEEAPDQVYDYFVKFLTA*
Ga0137383_112852161	3300012199	Vadose Zone Soil	EYPTVRRRVASNLVAAQPLPTSHALQVEAPDRVYDHFVKFFTA*
Ga0137383_113259482	3300012199	Vadose Zone Soil	YLFATRGGPPTQELPTVWRKFASNLVHAEPLPTGHHMQEDAPDGVYDQFVKFFTV*
Ga0137363_100678751	3300012202	Vadose Zone Soil	ILWGTRGAPPTQEFPTVWRKFASNLVDAQPLTTGHYLQEEAPDRVIDHFLKFFTA*
Ga0137363_116592762	3300012202	Vadose Zone Soil	MATPLLVLWGTRGAPPTQQYPTVWRKFASNLVDAQPLPTGHAVQVEAPDGVYDQFVKFFTV*
Ga0137376_111587321	3300012208	Vadose Zone Soil	ASNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTA*
Ga0150985_1061775112	3300012212	Avena Fatua Rhizosphere	EYPTVWRKFASNLVDAQPLPTGHYLQEEAPDRVYDYFVKFFAA*
Ga0137465_10560353	3300012231	Soil	TPLLVLWGTRGAPPTQEFPTVWRRFASNLVDAQPLPTGHALQVEAPDGVYDHFVKFFTA*
Ga0137384_112805451	3300012357	Vadose Zone Soil	KFAKNLVDAQPLPTGHYLQEEAPDQVYNYFVKFLTA*
Ga0150984_1162204592	3300012469	Avena Fatua Rhizosphere	EFPTVWRKFATNLVDAQPLPTGHALQVEAPDRVYDYFIKFFTA*
Ga0137413_107732932	3300012924	Vadose Zone Soil	ASNLVDVQPLPTGHYLQEDAPDQCYDHFVKFFKA*
Ga0137404_107572292	3300012929	Vadose Zone Soil	KYASNLVDVQPLPTGHYLQEEAPDQCYDHFMKFFKA*
Ga0137410_112421272	3300012944	Vadose Zone Soil	VWRKFASNLADVQPLATGHYLQEEAPDQVHDHFVKFFTA*
Ga0137410_118330821	3300012944	Vadose Zone Soil	GAPPTQEFPTVWRKFASNLVDAQPLATGHYLQEEAPDRVHDHFVKFFTG*
Ga0126369_136472732	3300012971	Tropical Forest Soil	GAPPTQEYPTVWRRFASNLVDAQPLPTGHAIQVEAPDRVYDHFIKFFTA*
Ga0134079_100661261	3300014166	Grasslands Soil	PPTQEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVYDYFVKFFTA*
Ga0163163_126850502	3300014325	Switchgrass Rhizosphere	WGTRGQPPTQEFPTVWRKFAKNLVDAQPLPTGHYLQEEAPDQVYDYFVKFLVT*
Ga0157379_114162001	3300014968	Switchgrass Rhizosphere	KCASNLVNAQPRPTCRVLHEEAPDRVSDQFIKFFMG*
Ga0182033_120804761	3300016319	Soil	APPTQEYPTVWRKFASNLVDAQPLPTGHYLQKEVPDRVIKHFLKFFTA
Ga0182032_103249341	3300016357	Soil	VLWGTRGLPPTEEYPTVWRKFASNLIDAQPLPTGHALQVEAPDRVYDHFVKFFKA
Ga0182034_101447893	3300016371	Soil	TQEYPTVWRKFASNLVDAQPLPPDRVIEHFFKFQNTRARR
Ga0182034_103698311	3300016371	Soil	PPTDEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVYDYFVKFCTA
Ga0182037_102888943	3300016404	Soil	WRKFASNLVDAQPLPTGHYLQEEAPDQVIDHCVKFFTT
Ga0182037_111650612	3300016404	Soil	VWRKFASNLVDAQPLPTGHYLMEEAPDRVIEHLLKFFTA
Ga0182037_113580561	3300016404	Soil	KDRKIAPPLLILWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPGPVYDYFIKFFTA
Ga0182037_120860622	3300016404	Soil	PPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFIKFFTA
Ga0187780_104496061	3300017973	Tropical Peatland	PTVWRKYASNLVDAQPLPTGHYLQEEAPDQCVDHFVKFFTT
Ga0184615_106204912	3300018059	Groundwater Sediment	WLRFASNLVAAEPLPTGHYLHEEMPNTVYDRFVDFFKA
Ga0187765_109404172	3300018060	Tropical Peatland	WRKYASNMVDAQPLPTGHYLQEEAPDRVIDYFLKFFTT
Ga0210407_110778922	3300020579	Soil	LPTVWRAFASNLVDAQPLQTGHHMQEDAPDQLYDRFVKFFTL
Ga0210404_106842451	3300021088	Soil	GAPPTQEYPTAWRRFATNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTA
Ga0210408_103255101	3300021178	Soil	GTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVHDHFVKFFTA
Ga0210408_108934251	3300021178	Soil	TVWKKYASNLVDAQPLPTGHYLQEEAPDRVIEHLLKFLA
Ga0210384_111187291	3300021432	Soil	PPTQEFPTVWRKFASNLVDAQPLPTGHYLQEEAPDRVYDHLVKFFTA
Ga0210402_101720661	3300021478	Soil	TPLLVLWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVHDHFIKFFTA
Ga0210402_101959443	3300021478	Soil	PTVWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHFIKFFTT
Ga0210402_102622391	3300021478	Soil	KFASNLVDAQPLPTGHYLQEEAPDRVYDHFVKFFTT
Ga0210410_108970432	3300021479	Soil	FASNLVDAQPLPTGHYLQEEAPDRVYDHFVKFFTA
Ga0242654_101903462	3300022726	Soil	WGSRGAPPTQEYPTVWRKFASNLIDGQPLPTGHYLMEEAPDRVIEHLLKFFTA
Ga0242654_104188092	3300022726	Soil	WGSRGAPPTQEYPTVWRKFASNLIDGQPLPTGHYLMEEAPDGVIEHLLKFFTA
Ga0207663_106286591	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QEYPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHCLKFFTT
Ga0207652_102913761	3300025921	Corn Rhizosphere	EYPTVWRKFASNLVDIQPLPSGHYIQEEQPDRVYNDSIKFFTA
Ga0207659_100906131	3300025926	Miscanthus Rhizosphere	GTRGQPPTQEYPTVWRKYASNLVDIQPLPSGHYIQEEQPDQVYDHCIRFFTA
Ga0257162_10257992	3300026340	Soil	PPTQEYPTVWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHFIKFFTT
Ga0208990_10890431	3300027663	Forest Soil	WRKFASNLVDVQPLPTGHYLQEDAPDQCYDHFVKFFKA
Ga0209180_101319732	3300027846	Vadose Zone Soil	RKFASNLVDAQPLPTGHYLQEEAPDRVVDHFLKFFTA
Ga0209693_102900722	3300027855	Soil	APPTQEYPTVWRKYASNLVDAQPLPTGHYLQEEAPDQVVDHFVKFFTT
Ga0209380_102001484	3300027889	Soil	RGAPPTQEYPTVWGRFATNLVDAQPLPTGHALQVEAPDRVHDHFVKFFTA
Ga0209067_100384321	3300027898	Watersheds	VWRKYASNLVDAQPLPTGHYLQEEAPDRVYDYFVKFFTT
Ga0308309_105217571	3300028906	Soil	KFASNLVDAQALATGHYLMEEAPDGVIEHLLKFFTA
Ga0222749_100844251	3300029636	Soil	TPLLVLWGTRGAPPSQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTA
Ga0222749_105228042	3300029636	Soil	RGAPPTQEYPTVWRRFATNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTA
Ga0307499_100313762	3300031184	Soil	VWRKFAKNLVDAQPLPTGHYLQEEAPDQVYDYFVKFFVT
Ga0265316_102827211	3300031344	Rhizosphere	TRGSPPTDEYPTVWRKYASSLVDIQPLPSGHYLQEEQPDRVYDYFIKFFTA
Ga0170818_1040684253	3300031474	Forest Soil	WRKFASNLVDAQPLPTGHYLQEEAPDQVIEHCLKFFTT
Ga0307476_105135032	3300031715	Hardwood Forest Soil	VWRKFASNLVDAQPLPTGHYLQEEAPDQVIDRFIKFFTT
Ga0318493_104272742	3300031723	Soil	PTVWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHCVKFFTT
Ga0318521_105489002	3300031770	Soil	MPLPILWATRGAPPTQEYPTVWRKFASNLVDAQPLPTGHYLQEEVPDRVIKHFLKFFMA
Ga0318546_107124481	3300031771	Soil	APPTQEYPTVWRKFASNLVDAQPLPTGHYLQEEAPDRVIEHFLKFFTA
Ga0318547_107690832	3300031781	Soil	YASNLVDAQPLPTGHYLQEEAPDRVYDYLVKFFTT
Ga0306919_113144491	3300031879	Soil	PLLVLWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFIKFFTA
Ga0306925_117827821	3300031890	Soil	TRGRPPTQEYPNAWRQFASNLVDAQPLPTGHALQVEAPNAVYDHFVKFFAA
Ga0318536_106756191	3300031893	Soil	PTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFVKFFTT
Ga0306923_102472601	3300031910	Soil	KDRKIAMPSLLLVATRGAPPTEELPTVWRKYMSHLVEVQYLPTGHHMQEEAPDGVYDQFVKFFTT
Ga0306923_105587602	3300031910	Soil	LLPTSWRKYASNLVDARPLPTGHALQVEAPDRVYDHFVKFFKA
Ga0306923_110909592	3300031910	Soil	MPLLILWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFLKFFTA
Ga0306923_111039171	3300031910	Soil	PTVWRKFASNLVDAQPLPTGHYLQKEVPDRVIKHFLKFFTA
Ga0306921_102475382	3300031912	Soil	VLWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYEHFVKFFTA
Ga0306921_126141562	3300031912	Soil	KYASNLVDAQPLPTGHYLQEDAPDKLIDYFVKFFTA
Ga0306921_126548041	3300031912	Soil	MPLLILWGTRGAPPTKEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFVRFFTA
Ga0310912_102988423	3300031941	Soil	VTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFIKFFTA
Ga0310913_102992791	3300031945	Soil	RKFASNLVDAQPLPTGHYLQEEAPDRVYDHFVKFFTT
Ga0310909_101742931	3300031947	Soil	RKYMSHLVEVQYLPTGHHMQEEAPDGVYDQFVKFFTT
Ga0310909_103798991	3300031947	Soil	VWRKFASNLVDAQPLPTGHYLQEEAPDQVIDHCVKFFTT
Ga0306926_109071231	3300031954	Soil	VLRKFASNLVDAQPLPTGHYPQEEVPDRVIKHFLKFFTA
Ga0306922_116092532	3300032001	Soil	IVTPLLVLWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQGEAPDRVYEHFVKFFT
Ga0306922_124025671	3300032001	Soil	PTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFVKFFAA
Ga0318533_103861243	3300032059	Soil	QEYPTIWRKFASNLIDAQPLPTGHALQVEAPDRVYDHFVKFFKA
Ga0318505_105716362	3300032060	Soil	RGAPPTEELPTVWRKYMSHLVEVQYLPTGHHMQEEAPDGVYDQFVKFFTT
Ga0311301_101402071	3300032160	Peatlands Soil	TQEYPTVWRRYASNLVDAQPLPTGHAVQVEAPDGVYYHFVKFFRA
Ga0311301_104686644	3300032160	Peatlands Soil	VTPLLVLWGTRGAPPTQEYPTVWRRFASNLVDAQPLPTGHALQVEAPDRVYDHFIKFFTT
Ga0306920_1023350182	3300032261	Soil	LLFGTRGAPPSQEYPTAWRKFASNLVDAQPLPTGRYMQEEAPDQIYDHFVKFFTA
Ga0306920_1032089311	3300032261	Soil	QEYPTVWRKYASNLVDAQPLPTGHYLQEEAPDQVVDHFIKFFTT

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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