Metagenome Family F063447

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063447
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	84 residues
Representative Sequence	MERKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Number of Associated Samples	91
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.95 %
% of genes near scaffold ends (potentially truncated)	29.46 %
% of genes from short scaffolds (< 2000 bps)	86.05 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.093 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.233 % of family members)
Environment Ontology (ENVO)	Unclassified (29.457 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.186 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.10% β-sheet: 0.00% Coil/Unstructured: 46.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01380	SIS	34.88
PF04055	Radical_SAM	3.88
PF00144	Beta-lactamase	3.88
PF00331	Glyco_hydro_10	3.88
PF13522	GATase_6	2.33
PF03466	LysR_substrate	1.55
PF13414	TPR_11	1.55
PF00563	EAL	1.55
PF01938	TRAM	1.55
PF06282	DUF1036	1.55
PF02018	CBM_4_9	0.78
PF00857	Isochorismatase	0.78
PF01568	Molydop_binding	0.78
PF08241	Methyltransf_11	0.78
PF13417	GST_N_3	0.78
PF00701	DHDPS	0.78
PF13673	Acetyltransf_10	0.78
PF00430	ATP-synt_B	0.78
PF04616	Glyco_hydro_43	0.78
PF07715	Plug	0.78
PF12158	DUF3592	0.78
PF11006	DUF2845	0.78
PF13432	TPR_16	0.78
PF04851	ResIII	0.78
PF13418	Kelch_4	0.78
PF13088	BNR_2	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.88
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.88
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.88
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	3.88
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.55
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.55
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.55
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.55
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.55
COG5480	Uncharacterized membrane protein	Function unknown [S]	1.55
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.78
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.78
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.74 %
Unclassified	root	N/A	27.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.10 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.78 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Xylophilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Xylophilus ampelinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus → Xylophilus ampelinus	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.78 %
Xylophilus ampelinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus → Xylophilus ampelinus	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100334671	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300003267\|soilL1_10070632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300004153\|Ga0063455_100810630	Not Available	650	Open in IMG/M
3300004463\|Ga0063356_100335974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1899	Open in IMG/M
3300004463\|Ga0063356_104663302	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300004643\|Ga0062591_102530112	Not Available	540	Open in IMG/M
3300005093\|Ga0062594_101244274	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300005290\|Ga0065712_10387465	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300005293\|Ga0065715_11037115	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005331\|Ga0070670_100361476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300005339\|Ga0070660_100769234	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300005340\|Ga0070689_100718219	Not Available	874	Open in IMG/M
3300005341\|Ga0070691_10219469	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300005343\|Ga0070687_100413494	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300005347\|Ga0070668_101801386	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005354\|Ga0070675_101425211	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300005367\|Ga0070667_100678961	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300005439\|Ga0070711_100912446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	750	Open in IMG/M
3300005455\|Ga0070663_100294614	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300005466\|Ga0070685_10390456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300005548\|Ga0070665_101039695	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300005836\|Ga0074470_10714222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3761	Open in IMG/M
3300006844\|Ga0075428_100686534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300006894\|Ga0079215_10480737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	767	Open in IMG/M
3300006954\|Ga0079219_10889488	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300007004\|Ga0079218_10209959	All Organisms → cellular organisms → Bacteria → Proteobacteria	1495	Open in IMG/M
3300007004\|Ga0079218_11270772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	771	Open in IMG/M
3300007004\|Ga0079218_11308597	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300007004\|Ga0079218_11353993	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300009553\|Ga0105249_12873071	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010399\|Ga0134127_12943368	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300010400\|Ga0134122_11370690	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300011442\|Ga0137437_1256020	Not Available	604	Open in IMG/M
3300012212\|Ga0150985_107067389	Not Available	544	Open in IMG/M
3300012469\|Ga0150984_108826322	Not Available	663	Open in IMG/M
3300012883\|Ga0157281_1011391	Not Available	997	Open in IMG/M
3300012943\|Ga0164241_10093111	All Organisms → cellular organisms → Bacteria → Proteobacteria	2167	Open in IMG/M
3300012943\|Ga0164241_10145281	All Organisms → cellular organisms → Bacteria → Proteobacteria	1698	Open in IMG/M
3300012943\|Ga0164241_10314569	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1120	Open in IMG/M
3300012943\|Ga0164241_10468888	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300012944\|Ga0137410_10159089	Not Available	1726	Open in IMG/M
3300013308\|Ga0157375_12375551	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300014326\|Ga0157380_10385443	Not Available	1324	Open in IMG/M
3300014745\|Ga0157377_10809159	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300015200\|Ga0173480_10148412	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300015371\|Ga0132258_12507926	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300017965\|Ga0190266_10951056	Not Available	570	Open in IMG/M
3300018422\|Ga0190265_10395630	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300018465\|Ga0190269_10459804	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300018469\|Ga0190270_10238677	Not Available	1571	Open in IMG/M
3300018469\|Ga0190270_12192227	Not Available	613	Open in IMG/M
3300018476\|Ga0190274_10005239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7786	Open in IMG/M
3300018476\|Ga0190274_10011919	All Organisms → cellular organisms → Bacteria → Proteobacteria	5433	Open in IMG/M
3300018476\|Ga0190274_10154635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1943	Open in IMG/M
3300018476\|Ga0190274_10766744	Not Available	1018	Open in IMG/M
3300018476\|Ga0190274_12463849	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018476\|Ga0190274_12507565	Not Available	613	Open in IMG/M
3300018481\|Ga0190271_10114737	All Organisms → cellular organisms → Bacteria → Proteobacteria	2519	Open in IMG/M
3300018481\|Ga0190271_10188456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2039	Open in IMG/M
3300018481\|Ga0190271_10457325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1381	Open in IMG/M
3300019361\|Ga0173482_10121024	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300019377\|Ga0190264_12357836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300020027\|Ga0193752_1012699	All Organisms → cellular organisms → Bacteria → Proteobacteria	4314	Open in IMG/M
3300020027\|Ga0193752_1091440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300021078\|Ga0210381_10279729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300022549\|Ga0212091_10052512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300022915\|Ga0247790_10023839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1326	Open in IMG/M
3300022917\|Ga0247777_1024260	All Organisms → cellular organisms → Bacteria → Proteobacteria	2246	Open in IMG/M
3300022917\|Ga0247777_1053204	Not Available	1429	Open in IMG/M
3300023070\|Ga0247755_1052176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	839	Open in IMG/M
3300023079\|Ga0247758_1013297	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300023169\|Ga0247762_1012726	Not Available	2344	Open in IMG/M
3300023272\|Ga0247760_1113900	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300023275\|Ga0247776_10228393	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300025918\|Ga0207662_10155112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1459	Open in IMG/M
3300025919\|Ga0207657_10197265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1621	Open in IMG/M
3300025926\|Ga0207659_11144115	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300025928\|Ga0207700_11472101	Not Available	604	Open in IMG/M
3300025930\|Ga0207701_11439161	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300025931\|Ga0207644_10126569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1951	Open in IMG/M
3300025932\|Ga0207690_11785388	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300025933\|Ga0207706_10276114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300025936\|Ga0207670_10178684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1597	Open in IMG/M
3300025936\|Ga0207670_11430095	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300025942\|Ga0207689_10941988	Not Available	729	Open in IMG/M
3300025942\|Ga0207689_11657224	Not Available	531	Open in IMG/M
3300025945\|Ga0207679_10468815	Not Available	1119	Open in IMG/M
3300026023\|Ga0207677_11447264	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026067\|Ga0207678_11354549	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300026067\|Ga0207678_11724094	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300027886\|Ga0209486_10906977	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300027886\|Ga0209486_10926272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus → Xylophilus ampelinus	580	Open in IMG/M
3300027886\|Ga0209486_10998460	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300027886\|Ga0209486_11047833	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300028379\|Ga0268266_10937536	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300028592\|Ga0247822_10482142	Not Available	979	Open in IMG/M
3300031184\|Ga0307499_10266834	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031456\|Ga0307513_10041704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5062	Open in IMG/M
3300031548\|Ga0307408_100051413	All Organisms → cellular organisms → Bacteria → Proteobacteria	2968	Open in IMG/M
3300031548\|Ga0307408_100383649	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031548\|Ga0307408_101642433	Not Available	611	Open in IMG/M
3300031562\|Ga0310886_10218800	Not Available	1049	Open in IMG/M
3300031731\|Ga0307405_10203431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1440	Open in IMG/M
3300031740\|Ga0307468_101060933	Not Available	718	Open in IMG/M
3300031824\|Ga0307413_10330347	Not Available	1168	Open in IMG/M
3300031824\|Ga0307413_10755349	Not Available	813	Open in IMG/M
3300031892\|Ga0310893_10062224	Not Available	1275	Open in IMG/M
3300031903\|Ga0307407_11298541	Not Available	571	Open in IMG/M
3300031908\|Ga0310900_10085875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300031938\|Ga0308175_102400804	Not Available	591	Open in IMG/M
3300031996\|Ga0308176_12118100	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300032005\|Ga0307411_10120252	Not Available	1898	Open in IMG/M
3300032013\|Ga0310906_10871984	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300032075\|Ga0310890_10205545	Not Available	1354	Open in IMG/M
3300032126\|Ga0307415_102015667	Not Available	562	Open in IMG/M
3300032144\|Ga0315910_10035672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3641	Open in IMG/M
3300032144\|Ga0315910_10058243	All Organisms → cellular organisms → Bacteria → Proteobacteria	2810	Open in IMG/M
3300032144\|Ga0315910_10077428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2427	Open in IMG/M
3300032144\|Ga0315910_10144721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1766	Open in IMG/M
3300032144\|Ga0315910_10157162	All Organisms → cellular organisms → Bacteria → Proteobacteria	1694	Open in IMG/M
3300032144\|Ga0315910_10547349	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300032144\|Ga0315910_11305166	Not Available	566	Open in IMG/M
3300032144\|Ga0315910_11579919	Not Available	511	Open in IMG/M
3300032157\|Ga0315912_10001742	All Organisms → cellular organisms → Bacteria → Proteobacteria	25454	Open in IMG/M
3300032157\|Ga0315912_10004038	All Organisms → cellular organisms → Bacteria → Proteobacteria	14130	Open in IMG/M
3300032157\|Ga0315912_10005929	All Organisms → cellular organisms → Bacteria → Proteobacteria	11087	Open in IMG/M
3300032157\|Ga0315912_10204998	Not Available	1548	Open in IMG/M
3300032157\|Ga0315912_10710317	Not Available	800	Open in IMG/M
3300032157\|Ga0315912_11415051	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.22%
Host-Associated	Host-Associated	31.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.12%
Plants	Host-Associated → Plants	31.78%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	5.43%
Freshwater	Environmental → Aquatic → Freshwater	1.55%
Sediment	Environmental → Aquatic → Sediment	1.55%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.20%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.20%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	5.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300023272	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L171-409R-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1003346711	3300000956	Soil	MERKLAEQIVAMVNAHVDQLISSLEPVEAQISAEEFAGYKRGVARVLSAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRTSRN*
soilL1_100706321	3300003267	Sugarcane Root And Bulk Soil	MDRKIAEQIVALVDAHIDQLISSLGPVEAQIPPDEFAAYKRAIARVINSYDLEVIGLIAREHPDLKPADEDSDLPAAEAQPPRFSRN*
Ga0063455_1008106302	3300004153	Soil	MDRKLAEQIVALVNAHVDQLISSLGPVEAEIPAEEFAGYKRAVARVISAYDAEIIDLVGREYPDLKPSDDDSELPEAAEPKTSRN*
Ga0063356_1003359742	3300004463	Arabidopsis Thaliana Rhizosphere	MERKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN*
Ga0063356_1046633021	3300004463	Arabidopsis Thaliana Rhizosphere	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDPDPPVAESVPPRSSRN*
Ga0062591_1025301121	3300004643	Soil	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDSDPPVAESAPPRSSRN*
Ga0062594_1012442741	3300005093	Soil	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRPSRN*
Ga0065712_103874652	3300005290	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEP
Ga0065715_110371151	3300005293	Miscanthus Rhizosphere	AEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPAEDDTGPAAPEQLPPRSSRN*
Ga0070670_1003614762	3300005331	Switchgrass Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVEAQVSPDEFAAYKRGVARVINTYDLEIIDRVAREYPDLKPADEDANPPAEESVPPRSSRN*
Ga0070660_1007692342	3300005339	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRSSRN*
Ga0070689_1007182192	3300005340	Switchgrass Rhizosphere	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDPDP
Ga0070691_102194691	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN*
Ga0070687_1004134941	3300005343	Switchgrass Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLP
Ga0070668_1018013861	3300005347	Switchgrass Rhizosphere	GTELMERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN*
Ga0070675_1014252111	3300005354	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDT
Ga0070667_1006789612	3300005367	Switchgrass Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDLKPADDDADLPSADVTPPSSSRN*
Ga0070711_1009124462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGTLMDRKLAEQIVALVDAHIDQLISSLEPVEANVAAGEFAEYKRGVARVIASYDAEIIDRVAREYPDLKPGDEDSGSPEASEPRTTRN*
Ga0070663_1002946142	3300005455	Corn Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIDRVTREYPDLKPADDDPEPSAPETEPPRSSRN*
Ga0070685_103904562	3300005466	Switchgrass Rhizosphere	LAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDLKPADDDADLPSADVTPPSSSRN*
Ga0070665_1010396952	3300005548	Switchgrass Rhizosphere	MERKMAEQIVELVNAHIDQLISSLAPVEAGLSPEEFAAYKRGVAKVIGVYDAEIIDRVTREYPDLKPADDDADPAEKDPPKFSRN*
Ga0074470_107142222	3300005836	Sediment (Intertidal)	MERKMAEQIVALVNGCIDQLISSLAPVEAGTSDADFAAYKRGVARVIAAFDVEIVDRIAHEHPDLRPDEDDAEPSAPEAVPPRSSRN*
Ga0075428_1006865342	3300006844	Populus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLEPVEAQIPPEEFAAYKRAVARVINSYDQEIIERIARKYPDLKPADEDSDPPTADPVPPRSSQN*
Ga0079215_104807372	3300006894	Agricultural Soil	MERKLAEQIVALVNAHVDQLISSLAPVEAEVSAEEFAGYKRGIARVISAYDAEIIERVAREYPDLKPSDDDPEPPGAEEPRKSRN*
Ga0079219_108894882	3300006954	Agricultural Soil	MDRKIAEQIVALVNAHIDQLISSLDPVAAQFSTEEFAAYKRGVARVISAYDAEIIERVAREFPDLKPADDDTEPAAPEQPPPRSSRN*
Ga0079218_102099592	3300007004	Agricultural Soil	MERKLAEQIVALVNAHVDQLISSLEPVAAEISAEEFAGYKRGVARVLSAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRTSRN*
Ga0079218_112707722	3300007004	Agricultural Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAALSAEEFASYKRGIARVISTYDTEIIDRVAREYPDLKPSEEDPEPQAIAEPRISRN*
Ga0079218_113085971	3300007004	Agricultural Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVINAYDAEIIERVAREHPDLRPTDDDSDPPAP
Ga0079218_113539932	3300007004	Agricultural Soil	MERKLAERIVALVNGHIDQLISSLAPVEAEISAEEFAGYKRGVARVINAYDAEIIERVAKDYPDLKPGDDDSNPADTAKPGPSHN*
Ga0105249_128730711	3300009553	Switchgrass Rhizosphere	MERKLAEQIVAFVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN*
Ga0134127_129433682	3300010399	Terrestrial Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTE
Ga0134122_113706902	3300010400	Terrestrial Soil	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDRKPADDDADLP
Ga0137437_12560201	3300011442	Soil	KLAEQIIALVNAHVDQLISSLEPIEAEISAEEFAGYKRGVARVISAYDVEIIDRVAREHPDLKPSDEDSGPSDTIEPRPSRN*
Ga0150985_1070673892	3300012212	Avena Fatua Rhizosphere	MDRKLAEQIVALVNSHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIERVSREFPDLKPADDDPEPTPAESAPPRSTRN*
Ga0150984_1088263223	3300012469	Avena Fatua Rhizosphere	MDRKLAEQIVALVNSHVDQLISSLAPVEAEISPEEFATFKRGIARVINAYDVEIIERVTREFPDLKPADDDPEPTPAESAPPRSTRN*
Ga0157281_10113911	3300012883	Soil	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEILDRVAREYPDLKPADDDADLPSADVTPPSSSRN*
Ga0164241_100931112	3300012943	Soil	MERKLAGQIVALVNAHIDQLISSLEPVEREVSAKEFAAYKRGVARVISAYDTEIIERVAREYPDLKPSDDDEASEPEAPPTTRN*
Ga0164241_101452812	3300012943	Soil	MDRNLAEQIVALVNGCVDQLIATLDPVESSTTPEEFAAYKRGVARVINAFDLEIVDRLAREHPHLKPDEDDEPGDDTQGPHSTN*
Ga0164241_103145691	3300012943	Soil	MERKLAGQIVALVNAHIDQLIASLEPVEREVSAKEFAAYKRGVARVISAYDTEIIDRVAREYPDLRPSDDDEAAEPEVPPTTRN*
Ga0164241_104688882	3300012943	Soil	MERKLAEQIIALVNAHVDQLISSLNPVEAEMSAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDDDSEPPESAETPGARRN*
Ga0137410_101590892	3300012944	Vadose Zone Soil	MGTHLMERKLAEQIVALVNAHVDQLISSLKPVETEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSETPEAAEPRKSQN*
Ga0157375_123755512	3300013308	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVTREFPDLKPADDDTE
Ga0157380_103854432	3300014326	Switchgrass Rhizosphere	MERKLAEQIVALVNAHIDQLIASLEPVEAEISAEEFAGYKRGVVRVINAYDVEIIDRVAREYPDLKPSDEEPAATGAAEPQTSRN*
Ga0157377_108091592	3300014745	Miscanthus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVEAQVSPDEFAAYKRGVARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRSSRN*
Ga0173480_101484122	3300015200	Soil	MDRKLAEQIVALVNSHIDQLISSLEPVEGHMSPEEFAAYKRGVARVISAYDAEIINRIASEYPDLKPADDDADPPAVESVPPRSSRN*
Ga0132258_125079262	3300015371	Arabidopsis Rhizosphere	MDRKLAEQIVALVNSHIDQLISSLEPVEKHLSPEEFAAYKRGVARVIAAYDAEIVNRIALEYPDLKPAEDDGEADPPEAVPPRSSQN*
Ga0190266_109510562	3300017965	Soil	LERKIAEQIVALVNAHVDQLISSLGPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Ga0190265_103956302	3300018422	Soil	MDRKLAEQIVALVNAHVDQLISSLAPVEAEIPPEEFAGYKRGVARVIGAYDTEIIERVTREYPDLKPGEDDADASDMAEPRPSRN
Ga0190269_104598041	3300018465	Soil	MERKLAEQIVALVNSHVDQLISSLEPVAQAMTDEEFAGYKRGVARVISAYDNEIIDRVTREYPDLRPGDDDLEPATSAEPAGMRRN
Ga0190270_102386773	3300018469	Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAVYKRGIARVITAYDVEIIDRIAREFPDLKPGDDDSDLPAPESMVTSKTRN
Ga0190270_121922272	3300018469	Soil	GPDLMERKLAEQIVALVNAHIDQLISSLEPVEAEMTADEFAGYKRGVARVISAYDVEIIDRVAREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0190274_100052395	3300018476	Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAEMSAEEFAGYKRGIARVISAYDTEIIDRVAREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0190274_100119192	3300018476	Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAEMSAEEFAGYKRGVARVINTYDVEIIDRVAREYPDLKPSDEDSGPSDTAEPHRSHN
Ga0190274_101546352	3300018476	Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVINSYDVEIIERVAREYPDLKPSDDDADPTSPEPAGPRISRN
Ga0190274_107667442	3300018476	Soil	MDRKLAEQIVALVNSHIDQLISSLAPVEAEIPPEEFAGYKRGIARVITAYDVEIIDRVAREHPDLKPSDDDADPTSPEPAGPRISHN
Ga0190274_124638491	3300018476	Soil	MDRKLAEQIVALVNAHVDQLISSLDPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVTREYPDLKPSDDDTEPPEATEPHASRN
Ga0190274_125075652	3300018476	Soil	MDRKLAEEIVALVNGCIDQLISSLPPVEEHASPEDFAAYKRGVARVITAFDTEIVDRIAREHPDLRPEEEESEPPEAETLPPHSSRN
Ga0190271_101147372	3300018481	Soil	MDRKLAEQIVALVNAHVDQLISSLEPVQAEISGEEFAAYKRGVARVISAYDAEIIDRVAREYPDLKPGDDDAVPSETPEPLPSRN
Ga0190271_101884562	3300018481	Soil	MDRKLAEQIVALVNAHIDQLISSLEPVEAEMTADEFAGYKRGVARVISAYDMEIIDRVTREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0190271_104573252	3300018481	Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAEMSADEFAGYKRGVARVISAYDVEIIDRVTREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0173482_101210242	3300019361	Soil	MDRKLAEQIVALVNSHIDQLISSLEPVEGHMSPEEFAAYKRGVARVISAYDAEIIDRIASEYPDLKPADDDADPPAVESVPPRSSRN
Ga0190264_123578361	3300019377	Soil	LPHWGQSPFAKKVPDLMERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSDSTPAEPAAPRISRN
Ga0193752_10126992	3300020027	Soil	MAEQIVALVNGCIDQLISTLEPVEAAVSAEEFAGYKRGVAKVITAFDIELIDRVTQDHPDLRPVDDDAEHPGTAQTETPKPSRN
Ga0193752_10914402	3300020027	Soil	MAEQIVTFVNGCIDQLIATLPPVEAETSPEEFAGYKRGVARVINAFDVEIIERIAREYPDLKPADDESDPADTQSPPPQSSRN
Ga0210381_102797292	3300021078	Groundwater Sediment	MERKLAEEIVALVNGCIDQLISSLAPVEEHASPEEFAAYKRGVARVITAFDTEIVDRIAREHPDLRPEDDESEPPEAEILPPRSTRN
Ga0212091_100525122	3300022549	Groundwater	MERKTAEQIVALANSCIDQLLSSLGPVEQSVSPEEFAAYKRGVAKVLNAIDVEIIERVAHDFPDLKTDDDSDHSGEPESPKSSHN
Ga0247790_100238392	3300022915	Soil	MDRKIAEQIVALVNAHIDQLISSLGPVEAQVSPDEFAAYKRGVARVINTYDLEIIDRVAREYPDLKPADEDANPPAEESVPPRSSRN
Ga0247777_10242602	3300022917	Plant Litter	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDLKPADDDADLPSADVTPPSSSRN
Ga0247777_10532041	3300022917	Plant Litter	HLMERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADEEADPPIEEPDIPKSQRN
Ga0247755_10521762	3300023070	Plant Litter	MDRKLAEQIVALANGCIDQLIVSLDPVERVASAEEFAAYKRGVAKVISAFDQEIIERIAREYPDLNPDDDADSVAAEAAPD
Ga0247758_10132972	3300023079	Plant Litter	MDRKLAEQIVALANGCIDQLIVSLDPVERVASAEEFAAYKRGVAKVISAFDQEIIERIAREYPDLNPDDDADSVAAEAPDPAKISRN
Ga0247762_10127263	3300023169	Plant Litter	MERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADEDADPPVEEPDIPKSQRN
Ga0247760_11139001	3300023272	Plant Litter	MERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADED
Ga0247776_102283931	3300023275	Plant Litter	MERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADEDADPPVEEPDIPK
Ga0207662_101551122	3300025918	Switchgrass Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0207657_101972653	3300025919	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRSSRN
Ga0207659_111441151	3300025926	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPERLPP
Ga0207700_114721011	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGTLMDRKLAEQIVALVDAHIDQLISSLEPVEANVAAGEFAEYKRGVARVIASYDAEIIDRVAREYPDLKPGDEDSGSPEA
Ga0207701_114391612	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPAD
Ga0207644_101265692	3300025931	Switchgrass Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIDRVTREYPDLKPADDDPEPSAPETEPPRSSRN
Ga0207690_117853881	3300025932	Corn Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIDRVTREYPDLKPAD
Ga0207706_102761141	3300025933	Corn Rhizosphere	LAEQFVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0207670_101786841	3300025936	Switchgrass Rhizosphere	LMERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0207670_114300952	3300025936	Switchgrass Rhizosphere	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDPDPPVA
Ga0207689_109419881	3300025942	Miscanthus Rhizosphere	MERKMAEQIVALVNGCIDQLISTLGPVEAAVSEEEFAGYKRGIAKVITAFDIELIDRVTRDHPDLRPADEDP
Ga0207689_116572242	3300025942	Miscanthus Rhizosphere	TMERKMAEQIVALVNGCIDQLISTLGPVEAAVSEEEFAGYKRGIAKVITAFDIELIDRVTRDHPDLRPADEDPENPEESESEVPKSSRN
Ga0207679_104688151	3300025945	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDANPPAEESVP
Ga0207677_114472642	3300026023	Miscanthus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADE
Ga0207678_113545491	3300026067	Corn Rhizosphere	MERKLAEQIVELVNAHVDQLISSLEPIEAEMTAEEFAGYKRGVARVIGAYDTEIIDRVTREFPDLKPTEDDAEPSDSAVPHPSRN
Ga0207678_117240942	3300026067	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRPSRN
Ga0209486_109069771	3300027886	Agricultural Soil	MVNAHVDQLISSLEPVEAQISAEEFAGYKRGVARVLSAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRTSRN
Ga0209486_109262722	3300027886	Agricultural Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSESTPAEPAAPRISRN
Ga0209486_109984601	3300027886	Agricultural Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVINAYDAEIIERVAREHPDLRPTD
Ga0209486_110478331	3300027886	Agricultural Soil	MERKLAERIVALVNGHIDQLISSLAPVEAEISAEEFAGYKRGVARVINAYDAEIIERVAKDYPDLKPGDDDSNPADTAKPGPSHN
Ga0268266_109375362	3300028379	Switchgrass Rhizosphere	MERKMAEQIVELVNAHIDQLISSLAPVEAGLSPEEFAAYKRGVAKVIGVYDAEIIDRVTREYPDLKPADDDADPAEKDPPKFSRN
Ga0247822_104821421	3300028592	Soil	MERKLAEQIVALVNAHIDQLIASLEPVEAEISAEEFAGYKRGIARVIGAYDTEIIERVTREFPDLRPSDEDPGPQEGAEPPRARRN
Ga0307499_102668342	3300031184	Soil	MDRKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGIARVISAYDTEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Ga0307513_100417049	3300031456	Ectomycorrhiza	MERKMAEQIVALVNGCIDQLISTLGPVEAAVSDEEFAGYKRGVAKVITAFDIELIERVTRDHPDLRPADDDAENPAQSDPDVPKSSRN
Ga0307408_1000514132	3300031548	Rhizosphere	MERKMAEQIVAFVNGCVDQLIATLPAVEAGVPPAEFADYKRGVARVIKAFDTEILERISREHPDLVPDEDESEPAMEPNPPPGSPN
Ga0307408_1003836492	3300031548	Rhizosphere	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSESTPAEPSAPRISRN
Ga0307408_1016424332	3300031548	Rhizosphere	QIVELVNAHVDQLISSLDPVEAAISAEEFAGYKRAVARVINAYDTEIIDRVTREYPDLKPGDDDSEPPEPAEPRTSRN
Ga0310886_102188001	3300031562	Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADD
Ga0307405_102034312	3300031731	Rhizosphere	MGSDPICQQKVPDPMERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSESTPAEPSAPRISRN
Ga0307468_1010609332	3300031740	Hardwood Forest Soil	MERKLAEQIVALVNAHVDQLISSLEPVEAEMSPEEFAGYKRGVVRVISAYDAEIIDRVAREYPDLKPSDDDAEPPETAEPRTSRN
Ga0307413_103303472	3300031824	Rhizosphere	MERKLAEQIVALVNAHIDQLIASLEPVEAGMSNEEFAGYKRGVARVISAYDAEIIDRVTREHPDLKPGDEDSEPSPSAEPRTTRN
Ga0307413_107553492	3300031824	Rhizosphere	MERKLAEQIVALVNTHIDQLISSLEPVKAGMSAEEFAGYKRGVARVISAYDAEIIDRVTREFPDLKPGDDDSDPPEAAEPRISRN
Ga0310893_100622241	3300031892	Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAALEQLPPRSSRN
Ga0307407_112985411	3300031903	Rhizosphere	VSLINSQIDQLISTLEPVEAAVSAEEFAGYKRGIARVITAFDAEVIERVTREHPDLRPDDDDTDTPGDDPAGPRRSHN
Ga0310900_100858752	3300031908	Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVTREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0308175_1024008042	3300031938	Soil	HVDQLIASLEPVRKEVSAAEFAEYKRGVARVISAYDAEIIDRVAREYPDLKPADDDVEPPEGSEPGTRRN
Ga0308176_121181001	3300031996	Soil	HIDQLISSLEPVEANVSAGEFAEYKRGVARVIASYDAEIIDRVAREHPDLKPGDEDSGSPEAPEPRTTRN
Ga0307411_101202522	3300032005	Rhizosphere	MERKLAEQIVALVNAHIDQLIASLEPVEAGMSNEEFAGYKRGVARVISAYDAEIIDRVTREHPDLKPGDEDSEPSPSAE
Ga0310906_108719842	3300032013	Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGVARVITAYDLEIIDRVAREFPDLKPSDDDSDPASADPTGPRISRN
Ga0310890_102055452	3300032075	Soil	MERKLAEQIVALVNAHVDQLISSLEPVQAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRSSRN
Ga0307415_1020156672	3300032126	Rhizosphere	MERKLAEQIVALVNAHIDQLISSLAPVEAELSPEEFAGYKRGVARVISAYDTEIMERVTRDFPDLKPEDDDPGPAGQADPRHSRN
Ga0315910_100356724	3300032144	Soil	MDRKLAEQIVALVNAHIDQLISSLEPVEAQISAEEFAAYKRGVARVINAYDVEIVDRIAREYPDLRPADEDAELPAAESIPPQSSRN
Ga0315910_100582432	3300032144	Soil	MDRKLAEQIVALVNAHIDQLISSLQPVEAHLSPEEFAAYKRGVARVISAYDAEIIDRVAREYPDLKPADEDSDPVTPDPVPPRSSRN
Ga0315910_100774282	3300032144	Soil	MDRKLAERIVALVDAHIDQLISSLEPVEAQISAEEFAAYKRGVARVINAYDLEIVDRIAREHPDLRPADEDAELPAAESVPPRSSRN
Ga0315910_101447212	3300032144	Soil	MERKLAEQIVALVNAHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEILDRVTREYPDLKPSDDDDAPATVEPRITRN
Ga0315910_101571622	3300032144	Soil	MERKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Ga0315910_105473492	3300032144	Soil	MERKLAEQIVALVNAHVDQLISTLEPVEGEISAEEFAGYKRGVARVIAAYDTEIIDRVAREYPDLKPSDEDAGPPETAEPRTSRN
Ga0315910_113051661	3300032144	Soil	RKLAEQIVALVNSHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEIIDRVTLEYPDLKPGDDEDAPAAAEPRITRN
Ga0315910_115799192	3300032144	Soil	MERKLAEQIVALVNAHIDQLIASLEPVEAEISAEEFAGYKRGIARVIGAYDTEIIERVTREFPDLRPSDEDPGPQEGAEPRGARHN
Ga0315912_100017426	3300032157	Soil	MERKLAEQIVALVNAHVDQLISSLEPVKAAISAEEFASYKRGVARVISAYDAEIIDRVAREFPDLKPGDDDEEAPAAAEPRTTRN
Ga0315912_100040386	3300032157	Soil	MDRKLAEQIVALVNAHIDQLISSLGPVEAEISAEEFAAYKRGVARVISAYDAEIIDRVAREFPDLKPSDEDSEPPEAAKPRTSHN
Ga0315912_1000592914	3300032157	Soil	MDRKLAEQIAALVNAHIDQLISSLEPVEAQVTPEEFAAYKRGVARVINNYDVGIIELLAREYPDLAPAEDDADPAAGSVPPRSSQN
Ga0315912_102049981	3300032157	Soil	MDRKLAEQIVALVNAHVDQLISSLEPVEAGMTAEEFAGYKRGVARLISAYDAEIIDRVTQEFPDLKPSDEDSDTPEPAETRATRN
Ga0315912_107103171	3300032157	Soil	MDRKLAEQIVALVNSHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEIIDRVTLEYPDLKPGDDEDAPAAAEPRITRN
Ga0315912_114150511	3300032157	Soil	MERKLAEQIVALVNAHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEIIDRVTSEFPDLKPSDDEDAPATAEPRITRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences