Metagenome Family F063444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063444
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	85 residues
Representative Sequence	MADTPRRLQKQAEKNTAFEKTTGRSHFSPNLRAKRTDIAMWCDQGKNEDQILAAIGGGVSREELKSFLAANNLTIKQIHSRKR
Number of Associated Samples	87
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.89 %
% of genes near scaffold ends (potentially truncated)	30.23 %
% of genes from short scaffolds (< 2000 bps)	95.35 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.163 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.078 % of family members)
Environment Ontology (ENVO)	Unclassified (27.132 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.062 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.14% β-sheet: 0.00% Coil/Unstructured: 55.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF07394	DUF1501	7.75
PF12796	Ank_2	3.88
PF02517	Rce1-like	3.88
PF13637	Ank_4	3.10
PF00291	PALP	3.10
PF03328	HpcH_HpaI	2.33
PF05128	DUF697	2.33
PF00733	Asn_synthase	2.33
PF03631	Virul_fac_BrkB	1.55
PF01965	DJ-1_PfpI	1.55
PF01261	AP_endonuc_2	1.55
PF00700	Flagellin_C	1.55
PF06439	3keto-disac_hyd	0.78
PF00217	ATP-gua_Ptrans	0.78
PF10518	TAT_signal	0.78
PF01797	Y1_Tnp	0.78
PF02781	G6PD_C	0.78
PF02308	MgtC	0.78
PF04994	TfoX_C	0.78
PF02800	Gp_dh_C	0.78
PF09099	Qn_am_d_aIII	0.78
PF13606	Ank_3	0.78
PF04389	Peptidase_M28	0.78
PF00479	G6PD_N	0.78
PF09397	FtsK_gamma	0.78
PF04542	Sigma70_r2	0.78
PF00293	NUDIX	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.88
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.88
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	2.33
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	2.33
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	2.33
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	2.33
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	1.55
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.55
COG1344	Flagellin and related hook-associated protein FlgL	Cell motility [N]	1.55
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.78
COG3869	Protein-arginine kinase McsB	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.78
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.16 %
Unclassified	root	N/A	48.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.16 %
Unclassified	root	N/A	48.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.16 %
Unclassified	root	N/A	48.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	26.36 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.55 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	20.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	17.05 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.55 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	8.53 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	7.75 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.78 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	8.53 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	4.65 %
Lacipirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae	3.10 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.55 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.78 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	7.75 %
Adhaeretor	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Adhaeretor	3.10 %
Pirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula	2.33 %
Anatilimnocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	1.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.55 %
Lewinellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae	0.78 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.84 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	7.75 %
Adhaeretor mobilis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Adhaeretor → Adhaeretor mobilis	3.10 %
Pirellula staleyi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	2.33 %
Anatilimnocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	1.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.55 %
Lewinella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella	0.78 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459011\|GI3SL7401ETABB	Not Available	501	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104295237	Not Available	621	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105199079	Not Available	976	Open in IMG/M
3300000956\|JGI10216J12902_120857802	Not Available	837	Open in IMG/M
3300002568\|C688J35102_119575296	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300002568\|C688J35102_120855763	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	1841	Open in IMG/M
3300003319\|soilL2_10224882	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300004156\|Ga0062589_100404273	Not Available	1110	Open in IMG/M
3300004156\|Ga0062589_101958569	Not Available	593	Open in IMG/M
3300004157\|Ga0062590_100144285	All Organisms → cellular organisms → Bacteria → PVC group	1616	Open in IMG/M
3300004157\|Ga0062590_101164031	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300004157\|Ga0062590_102831079	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300004463\|Ga0063356_100097980	Not Available	3167	Open in IMG/M
3300004463\|Ga0063356_100903967	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1247	Open in IMG/M
3300004463\|Ga0063356_101243193	Not Available	1085	Open in IMG/M
3300004463\|Ga0063356_103280192	Not Available	697	Open in IMG/M
3300004479\|Ga0062595_101179669	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	677	Open in IMG/M
3300004480\|Ga0062592_100590267	All Organisms → cellular organisms → Bacteria → PVC group	941	Open in IMG/M
3300004480\|Ga0062592_101267766	Not Available	693	Open in IMG/M
3300005093\|Ga0062594_100149557	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300005294\|Ga0065705_10133112	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	2382	Open in IMG/M
3300005295\|Ga0065707_11150323	Not Available	505	Open in IMG/M
3300005329\|Ga0070683_100395781	Not Available	1317	Open in IMG/M
3300005329\|Ga0070683_101504889	Not Available	647	Open in IMG/M
3300005330\|Ga0070690_100649577	Not Available	805	Open in IMG/M
3300005330\|Ga0070690_100684417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	786	Open in IMG/M
3300005332\|Ga0066388_100537630	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Adhaeretor → Adhaeretor mobilis	1800	Open in IMG/M
3300005332\|Ga0066388_101282144	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1261	Open in IMG/M
3300005332\|Ga0066388_102813577	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005332\|Ga0066388_103112668	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005332\|Ga0066388_103645704	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	786	Open in IMG/M
3300005332\|Ga0066388_104463220	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005437\|Ga0070710_10147105	Not Available	1450	Open in IMG/M
3300005440\|Ga0070705_101056080	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005451\|Ga0066681_10977708	Not Available	505	Open in IMG/M
3300005471\|Ga0070698_101687507	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005529\|Ga0070741_10292944	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300005548\|Ga0070665_100299717	Not Available	1610	Open in IMG/M
3300005559\|Ga0066700_10578875	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	783	Open in IMG/M
3300005561\|Ga0066699_10281786	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1180	Open in IMG/M
3300005569\|Ga0066705_10667520	Not Available	630	Open in IMG/M
3300005713\|Ga0066905_100275247	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300005713\|Ga0066905_101177262	Not Available	684	Open in IMG/M
3300005764\|Ga0066903_100470903	Not Available	2112	Open in IMG/M
3300005764\|Ga0066903_106286380	Not Available	620	Open in IMG/M
3300005764\|Ga0066903_108219128	Not Available	534	Open in IMG/M
3300005841\|Ga0068863_101545160	Not Available	672	Open in IMG/M
3300005843\|Ga0068860_100917114	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	892	Open in IMG/M
3300006844\|Ga0075428_100844241	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300006845\|Ga0075421_101488895	Not Available	741	Open in IMG/M
3300006847\|Ga0075431_102132351	Not Available	515	Open in IMG/M
3300006854\|Ga0075425_101162310	All Organisms → cellular organisms → Bacteria → PVC group	878	Open in IMG/M
3300006871\|Ga0075434_102147157	Not Available	563	Open in IMG/M
3300006904\|Ga0075424_101491400	Not Available	718	Open in IMG/M
3300009012\|Ga0066710_101771277	Not Available	935	Open in IMG/M
3300009094\|Ga0111539_11971060	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300009098\|Ga0105245_10527223	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	1200	Open in IMG/M
3300009098\|Ga0105245_12533152	Not Available	566	Open in IMG/M
3300009137\|Ga0066709_100230668	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2460	Open in IMG/M
3300009137\|Ga0066709_101145925	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1144	Open in IMG/M
3300009137\|Ga0066709_103838650	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	546	Open in IMG/M
3300009148\|Ga0105243_12646733	Not Available	542	Open in IMG/M
3300009156\|Ga0111538_13058902	Not Available	584	Open in IMG/M
3300009553\|Ga0105249_11276353	Not Available	806	Open in IMG/M
3300009553\|Ga0105249_13242185	Not Available	523	Open in IMG/M
3300009609\|Ga0105347_1079660	Not Available	1211	Open in IMG/M
3300009610\|Ga0105340_1068449	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1398	Open in IMG/M
3300009678\|Ga0105252_10318638	Not Available	697	Open in IMG/M
3300009678\|Ga0105252_10435836	Not Available	602	Open in IMG/M
3300010375\|Ga0105239_11911397	Not Available	688	Open in IMG/M
3300010397\|Ga0134124_10090546	Not Available	2645	Open in IMG/M
3300010397\|Ga0134124_11359572	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010401\|Ga0134121_12490367	Not Available	559	Open in IMG/M
3300011420\|Ga0137314_1111175	Not Available	674	Open in IMG/M
3300011432\|Ga0137428_1114820	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012212\|Ga0150985_103028215	Not Available	708	Open in IMG/M
3300012212\|Ga0150985_104411785	All Organisms → cellular organisms → Bacteria → PVC group	724	Open in IMG/M
3300012212\|Ga0150985_105783985	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	969	Open in IMG/M
3300012212\|Ga0150985_108980308	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Adhaeretor → Adhaeretor mobilis	1095	Open in IMG/M
3300012212\|Ga0150985_111303390	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Lewinella	573	Open in IMG/M
3300012212\|Ga0150985_113642270	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	678	Open in IMG/M
3300012212\|Ga0150985_114996437	Not Available	688	Open in IMG/M
3300012212\|Ga0150985_119272439	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012212\|Ga0150985_120830197	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300012212\|Ga0150985_122443515	Not Available	533	Open in IMG/M
3300012356\|Ga0137371_11244868	Not Available	553	Open in IMG/M
3300012469\|Ga0150984_101076742	Not Available	537	Open in IMG/M
3300012469\|Ga0150984_115486622	All Organisms → cellular organisms → Bacteria → PVC group	731	Open in IMG/M
3300012469\|Ga0150984_120920653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	558	Open in IMG/M
3300012469\|Ga0150984_122207960	Not Available	562	Open in IMG/M
3300012685\|Ga0137397_10506479	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012922\|Ga0137394_11455835	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012929\|Ga0137404_11191429	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012957\|Ga0164303_10897905	Not Available	620	Open in IMG/M
3300012958\|Ga0164299_11402579	Not Available	540	Open in IMG/M
3300012985\|Ga0164308_11537370	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	612	Open in IMG/M
3300012988\|Ga0164306_10578293	All Organisms → cellular organisms → Bacteria → PVC group	876	Open in IMG/M
3300012988\|Ga0164306_11437054	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012989\|Ga0164305_11543596	Not Available	590	Open in IMG/M
3300013308\|Ga0157375_13523377	Not Available	521	Open in IMG/M
3300014325\|Ga0163163_13211272	Not Available	510	Open in IMG/M
3300015264\|Ga0137403_10320107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1443	Open in IMG/M
3300015371\|Ga0132258_12694372	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300015371\|Ga0132258_13021821	Not Available	1165	Open in IMG/M
3300015371\|Ga0132258_13936076	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Adhaeretor → Adhaeretor mobilis	1009	Open in IMG/M
3300015374\|Ga0132255_103337093	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	684	Open in IMG/M
3300018053\|Ga0184626_10055337	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1664	Open in IMG/M
3300018072\|Ga0184635_10073367	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	1338	Open in IMG/M
3300018083\|Ga0184628_10033205	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	2578	Open in IMG/M
3300018432\|Ga0190275_12517743	Not Available	592	Open in IMG/M
3300018481\|Ga0190271_13297194	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300019362\|Ga0173479_10372294	Not Available	679	Open in IMG/M
3300020195\|Ga0163150_10436196	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300022899\|Ga0247795_1106769	Not Available	503	Open in IMG/M
3300023077\|Ga0247802_1041270	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	709	Open in IMG/M
3300025913\|Ga0207695_11078826	Not Available	683	Open in IMG/M
3300025928\|Ga0207700_10560429	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1015	Open in IMG/M
3300025961\|Ga0207712_10892737	Not Available	785	Open in IMG/M
3300026035\|Ga0207703_12027119	Not Available	552	Open in IMG/M
3300027513\|Ga0208685_1037304	Not Available	1062	Open in IMG/M
3300027909\|Ga0209382_11161395	Not Available	792	Open in IMG/M
3300031716\|Ga0310813_10143358	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Adhaeretor → Adhaeretor mobilis	1914	Open in IMG/M
3300031716\|Ga0310813_10537713	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1026	Open in IMG/M
3300031716\|Ga0310813_11833814	Not Available	570	Open in IMG/M
3300032002\|Ga0307416_102370323	Not Available	630	Open in IMG/M
3300032421\|Ga0310812_10408438	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300034113\|Ga0364937_045007	Not Available	809	Open in IMG/M
3300034147\|Ga0364925_0057508	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300034148\|Ga0364927_0140380	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.34%
Host-Associated	Host-Associated	35.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.81%
Plants	Host-Associated → Plants	35.66%
Aquatic	Environmental → Aquatic	8.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.28%
Sediment	Environmental → Aquatic → Sediment	7.75%
Floodplain	Environmental → Terrestrial → Floodplain	2.33%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.21%
Loam	Environmental → Terrestrial → Soil → Loam	16.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.33%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	10.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.53%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.10%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.10%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.33%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F64_04396870	2170459011	Grass Soil	LNPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQILANLPGVSREELRNFMKSNNLTIKQIHSRKRV
INPhiseqgaiiFebDRAFT_1042952371	3300000364	Soil	MAKITPDSARVQKLAQHNAAFEKSTGKSAFSPQLRARKTDIGLWCDQGKSEDQILASLGGAISREELRNFLAANKMVIKQIHSRKR*
INPhiseqgaiiFebDRAFT_1051990791	3300000364	Soil	MAKITPKINPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIAMWCDQGKNEDQLLANLPGVSREELRNFMKANNFTIKQIHSRKRV*
JGI10216J12902_1208578021	3300000956	Soil	MADVPRRLQKQAEKNTAFEKTTGKSHFSPLLRGRKTEIAMWCDQGKNEDQILAGIGRGVSREELKEFMKANNLTIKQIHSRKGGVNR*
C688J35102_1195752962	3300002568	Soil	MADIPKRIKKLTEKDTAFEKTTGKSHFSPTLRSRKTDIAMWCDQGKTEDQILAGLAGVSREELRSFMQANSLTIKQFKSLRKK*
C688J35102_1208557633	3300002568	Soil	MDKTPARLNKLATKATAFEKSTGKSAFSPQLRGRRTDIAMWCDQGKNEDQILANLGGISREELRAFLTANNLQIKHIHSRKRT*
soilL2_102248822	3300003319	Sugarcane Root And Bulk Soil	MADIPQRIKKLSDKDKAFEKTTGKSHFSPTLRARRTEIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0062589_1004042731	3300004156	Soil	MANKPISSRLQKQADKNTSFEKTTGKSHFSPTLRTRRTDIAMWCDQGKNEDQILAAIGGGVSREELKEFLKANNLAIKQLHSRKTR*
Ga0062589_1019585691	3300004156	Soil	MAKLTPRLQKQDDKAKSFQQQTGKSAFSPTLRSKRTDIAMWCDQGKNEDQILANLPGVSREELRNFMQANNLTIKQIHSRKRF*
Ga0062590_1001442851	3300004157	Soil	MAKINPKLTPRLQKQADHVKAFEQQTGRAGSAFSPTLRAKKTDIMMWADQGKNEDQLLANLPGVSREELRNFMKANNIAIKQIHSRKRL*
Ga0062590_1011640312	3300004157	Soil	MADIPQRVKKLSDKDKAFEKTTGKSHFSPTLRARKTEVAMWCDQGKNEDQILAGLAGVSREELRTFMQANNLTIKQFKSLRKK*
Ga0062590_1028310792	3300004157	Soil	LKAIQPAQTVCAELFWDKGNQMAKTPPISSRLQKQNDKNTAFEKTTGKSHFSPNLRAKRTDIMMWCDQGKNEDQILAMVGGVSREELKQFMAANNFTIKQVHSRKK*
Ga0063356_1000979801	3300004463	Arabidopsis Thaliana Rhizosphere	SMAKTPDIGRLKKQADKNTAFEKTTGKSHFSPALRAKRTDIAMWADQGKNEDQILANLGSGISREELKQFLAANSITIKQFKRKA*
Ga0063356_1009039672	3300004463	Arabidopsis Thaliana Rhizosphere	MADIPERLKKQAAKSTAFEKTTGKSAFSPHLRARRTDIALWCDQGKNEDQILAMVGGGVSRDELKQFMAANNLQIKQIHSRKRT*
Ga0063356_1012431931	3300004463	Arabidopsis Thaliana Rhizosphere	MAKTPPKPTESARVQKLNLHNTAFEKSTGKSAFSPALRARKTEITMWCDQGKNEDQILANLPGISREELKRFLTANNLTIKKLSAKKR*
Ga0063356_1032801922	3300004463	Arabidopsis Thaliana Rhizosphere	MADVSKRVQKLDAKNTAFEKSTNRSHFSPTLRARKTEIAMWVDQGKNEDQLLAAIGSGVSREELKSFLAANNLTIKKIPPRKR*
Ga0062595_1011796692	3300004479	Soil	MPKPDPKINPRLQKQADHVKAFEQQTGKSAFSPTLRAKRTDIVMWCDQGKNEDQLLANLPGVSREELRNFMKANNLT
Ga0062592_1005902672	3300004480	Soil	MADIPQRMKKLSDKDKAFEKTTGKSHFSPTLRARKTEVAMWCDQGKNEDQILAGLAGVSREELRTFMQANNLTIKQFKSLRKK*
Ga0062592_1012677661	3300004480	Soil	MANTPTPSEREQKQEAKNTAFEKTTGKSHFSPNLRARRTDIAMWCDQGKNEDQILASLGGGVSREELKQFMAANKLVIKQMAKLRKK*
Ga0062594_1001495571	3300005093	Soil	MADIPQRMKKLSDKDKAFEKTTGKSHFSPTLRARKTEIAMWCDQGKNEDQILAGLAGVTREELRSFMQANNLTIKQFKSLRKK*
Ga0065705_101331122	3300005294	Switchgrass Rhizosphere	MAKTPPKPTESARVQKLEQHNTAFEKSTGKSAFSPALRARRTEIAMWCDQGKNEDQILANLPGISREELKRFLTANNLTIKKLSAKKR*
Ga0065707_111503231	3300005295	Switchgrass Rhizosphere	MADIPDRLKKQAAKSTAFEKTTGKSAFSPHLRSRRTDIAMWCDQGKNEDQILAMVGGGVSREELKQFMAANNLQIKQIHSRKRT
Ga0070683_1003957811	3300005329	Corn Rhizosphere	MADIPQRVKKLSDKDTAFEKTTGKSHFSPALRSRKTDIAMWCDQGKNEDQILAAIGGGVSREELRSFMQTNNLTSKQFKALRKK*
Ga0070683_1015048891	3300005329	Corn Rhizosphere	MAKINPKLNPRVQKQADHAKAFEQQTGRPGSAFSPTLRAKKTDIMMWCDQGKNEDQLFANLPGVSREELRNFMKANNLAIKQIHSRKRV*
Ga0070690_1006495772	3300005330	Switchgrass Rhizosphere	MADLPQRLQKQEAKNTAFEKSTGKSHFSPNLRARKTDIAMWCDQGKNEDQILAAVGGGVSREELKSFLAANKLVIKKMKPGKR*
Ga0070690_1006844172	3300005330	Switchgrass Rhizosphere	MADVPKRIQKLNAKDTAFEKTTGKSHFSPILRSRRTDIAMWCDQGKNEDQILAALGGGVSREELRSFMKTNNLTIKQFKSLRKK*
Ga0066388_1005376302	3300005332	Tropical Forest Soil	MADIPQRVKKLSDKDKAFEKTTGKSHFSPTLRARKSEIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0066388_1012821442	3300005332	Tropical Forest Soil	VANIPQRLQKQAVKNSSFEKATGKSHFSPHLRARRTEIAMWVDQGKNEDQILAAVGGGVSREELKSFLAANNLTIKQIHSRKK*
Ga0066388_1028135772	3300005332	Tropical Forest Soil	MADIPQRVKKLSDKDKAFEKTTGKSHFSPTLRARKSEIAIWCDQGKNEDQILAGLPGVSREELRSFMQANNLTIKQFKALRKK*
Ga0066388_1031126681	3300005332	Tropical Forest Soil	MAKTPDSARLQKQAEKNKSFEKSTGKSHFSPTLRARRTEIAMWCDQGKNEDQILANLGGVSREELKSFLAANNLTIKKLN
Ga0066388_1036457042	3300005332	Tropical Forest Soil	MADIPQRVKKLSDKDKAFEKSTGKSHFSPTLRARKSEIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0066388_1044632202	3300005332	Tropical Forest Soil	QKLNQKDTAFEKSTGKSAFSPELRARKTDIALMVDQGKTEDQILAAIGGSISREELKKFLAANNLVIKQLFGRKK*
Ga0070710_101471051	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDKTPARLNKLATKATAFEKSTGKSAFSPQLRGRRTEIVMWCDQGKTEDQILASLGGISREELRAFMAANNMQIKQIHSRKRT*
Ga0070705_1010560801	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAKITPDSARVQKLAQHNAAFEKSTGKSAFSPQLRARKTDIGLWCDQGKSEDQILASLGGAISREELKNFLAANKMVIKQIHSRKR*
Ga0066681_109777081	3300005451	Soil	MAKTTPINARLQKQNDKNTAFEKTTGKSHFSPNLRAKRTDIAMWCDQGKNEDQILAAIGGGVSREELKSFMAANNFTIKQIHSRKK*
Ga0070698_1016875072	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAKITPDSARVQKLAQRNAAFEKSTGKSAFSPQLRARKTDIGLWCDQGKSEDQILASLGGAISREELKSFLAANKMVIKQIHSRKR*
Ga0070741_102929442	3300005529	Surface Soil	MPDIPKRIKKLSEKDTAFEKQTGKSHFSPTLRARRSEIALWCDQGKNEDQILSQLAGVSREELRSFMQANNLTIKQFKALRKK*
Ga0070665_1002997172	3300005548	Switchgrass Rhizosphere	MAKITPREQKQADKSKSFEQQTGKSAFSPTLRSKRTDIMMWCDQGKNEDQILANLPGVSREELKNFMKANNLQIKQIHSRKRV*
Ga0066700_105788752	3300005559	Soil	MADIPKRIKKLSEKDTAFEKTTGKSHFSPTLRARKTEIAMWCDQGKNEDQLLGALGGGVSREELRSFMQANN
Ga0066699_102817861	3300005561	Soil	MANTPERLKKQEAKNTAFEKTTGRSHFSPQLRARRTEIAMWCDQGKNEDQILANIGAGVSREELKSFLAANSLTI
Ga0066705_106675202	3300005569	Soil	MDKTPARLNKLAAKNTNFEKSTGKSAFSPQLRGRRTEIAMWCDQGKNEDQILANLGGISREELRAFLAANNLTIKQIHSRKKT*
Ga0066905_1002752473	3300005713	Tropical Forest Soil	LPDKNTTFEKSTGKSSFSPILRGRKTEITMWCDQGKNEDQILAAIGGGVSRDELKRFMAANNLSIKQLRPGKR*
Ga0066905_1011772621	3300005713	Tropical Forest Soil	MAKKMESVRLQQQALHNKSFEKATGKSHFSPALRARKTEIAMWCDQGKNEDQILALIGGISREELRSFLAANKLTIKVLHARKR*
Ga0066903_1004709035	3300005764	Tropical Forest Soil	MANIPPRLQKQADKNMSFEKSTGKSHFSPHLRARRTEIAMWCDQGKNEDQILAAVGGGISREELRSFLTANNLTIKQIHSRKK*
Ga0066903_1062863802	3300005764	Tropical Forest Soil	MAKTPISSRLQKQAEKNTAFEKSTGKSHFSPELRARRTEIAMWCDQGKNEDQILAAFKGVSREELKSFMAANNLTIKQLARKKT*
Ga0066903_1082191281	3300005764	Tropical Forest Soil	QADHVKAFEQQTGRPGSAFSPTLRAKKTDIMMWADQGKNEDQLLANLPGVSREELRNFMKANNITIKQIHSRKRL*
Ga0068863_1015451602	3300005841	Switchgrass Rhizosphere	TPDSARVQKLAQHNAAFEKSTGKSAFSPQLRARKTDIGLWCDQGKSEDQILASLGGAISREELKNFLAANKMVIKQIHSRKR*
Ga0068860_1009171141	3300005843	Switchgrass Rhizosphere	QKLQQRDTAFEKSTGKSAFSPQLRARRTDIALMVDQGKSEDQILAAIGGSISREELKGFLAANNLVIKKLYGRKK*
Ga0075428_1008442411	3300006844	Populus Rhizosphere	MAKKMESKRLQTQAVHNASFEKATGKSHFSPALRARKTEIAMWCDQGKNEDQLLALIGGGISREELKSFLAANKLQIKQPSLRKR*
Ga0075421_1014888952	3300006845	Populus Rhizosphere	MAKTPDIGRLKKQADKNTAFEKTTGKSHFSPALRAKRTDIAMWCDQGKNEDQILANLGGGISREELKQFMAANGMTIKKINALRKK*
Ga0075431_1021323511	3300006847	Populus Rhizosphere	MAKAAKAPPQSEREQKLGARNVAFEKSTGKSSFSPHLRARRTEIAMWCDQGKNEDQILAAVGGGVSREELQRFMAANNLVVKKVQGRKR*
Ga0075425_1011623102	3300006854	Populus Rhizosphere	MADIPKRIKKLTEKDTAFEKTTGKSHFSPTLRARRTDIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0075434_1021471572	3300006871	Populus Rhizosphere	MANKPISSRLQKQADKNTSFEKTTGKSHFSPTLRTRRTDIAMWCDQGKNEDQILAAIGGGVSREELKEFLKANNLAIKQLHSRKTR
Ga0075424_1014914002	3300006904	Populus Rhizosphere	QKQADKNTSFEKTTGKSHFSPTLRTRRTDIAMWCDQGKNEDQILAAIGGGVSREELKEFLKANNLAIKQLHSRKTR*
Ga0066710_1017712772	3300009012	Grasslands Soil	TAFEKTTGKSHFSPTLRARKTEIAMWCDQGKNEDQLLAALGGGVSREELRSFMQANNLTIKQFKSLRKK
Ga0111539_119710601	3300009094	Populus Rhizosphere	MTGRTTDLSPKEDPMAKKMESKRLQTQAVHNASFEKATGKSHFSPALRARKTEIAMWCDQGKNEDQLLALIGGGISREELKNFLAANKLTIKQPT
Ga0105245_105272232	3300009098	Miscanthus Rhizosphere	MAKTTASARVQKLQQRDTAFEKSTGKSAFSPQLRARRTDIALMVDQGKSEDQILAAIGGSISREELKGFLAANNLVIKKLYGRKK*
Ga0105245_125331521	3300009098	Miscanthus Rhizosphere	MAKITPKIIPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQILANLPGVSREELRNFMKANNMAIKQIHSRKRL*
Ga0066709_1002306685	3300009137	Grasslands Soil	MKPFDKEILMAKIIGRLQKQAEKNTAFEKSTGKSHFSPTLRAKRTDIAMWCDQGKNEDQILAMIGGGVSREELKSFLAANNLTIKQFKGLKK*
Ga0066709_1011459252	3300009137	Grasslands Soil	MADIPKRIKKLSEKDTAFEKTTGKSHFSPTLRARRTEIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0066709_1038386501	3300009137	Grasslands Soil	MAEIPKRIKKLSEKDTAFEKTTGKSHFSPTLRARKTEIAMWCDQGKNEDQLLAALGGGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0105243_126467331	3300009148	Miscanthus Rhizosphere	MPKPDPKINPRLQKQADHVKAFEQQTGRVGSAFSPTLRAKKTDIMMWADQGKNEDQLLANLPGVSREELRNFMKANNLTIKQIHSRKRL*
Ga0111538_130589021	3300009156	Populus Rhizosphere	MAKTPPKPTDSVRVQKLEQHNQAFEKSTGKSAFSPALRARKTEIAMWCDQGKNEDQILANLPGISREELKRFLTANNLTIKKLSVRK
Ga0105249_112763531	3300009553	Switchgrass Rhizosphere	IPRRSPHSRSYFSIEVDMAKTTASARVQKLQQRDTAFEKSTGKSAFSPQLRARRTDIALMVDQGKSEDQILAAIGGSISREELKGFLAANNLVIKKLYGRKK*
Ga0105249_132421851	3300009553	Switchgrass Rhizosphere	LVADLSRKVAHMANTPTPPDRVQKQEAKNTAFEKTTGKSHFSPNLRSRKTDIAMWCDQGKNEDQILAGLGGGVSREELKNFMAANHLVIKKMAKLRKK*
Ga0105347_10796601	3300009609	Soil	MATTPSPSEREKKQEAKNTAFEKTTGKSHFSPNLRARRTDIAMWCDQGKNEDQILASLGGGVSREELRSFMAANKLVIKQMAKLRKK*
Ga0105340_10684491	3300009610	Soil	MAKTPDIGRLKKQAEKNTAFEKSTGKSHFSPALRAKRTDIAMWCDQGKNEDQILANLGGGISREELKQFMASNGMTIKKINALRKK*
Ga0105252_103186381	3300009678	Soil	MADIPDRLKKQAAKSTAFEKTTGKSAFSPHLRSRRTDIAMWCDQGKNEDQILAMVGGGVSREELKQFMAANNLTVKQIHSRKRT*
Ga0105252_104358361	3300009678	Soil	EKKQEAKNTAFEKTTGKSHFSPNLRARRTDIAMWCDQGKNEDQILASLGGGVSREELRSFMAANKLVIKQMAKLRKK*
Ga0105239_119113972	3300010375	Corn Rhizosphere	MAKIPPKINPRLQKQSEHVKAFEQQTGKSAFSPTLRAKRTDIMMWCDQGKNEDQLLANLPGVSREELRNFMKANNITIKQIHSRKRV*
Ga0134124_100905463	3300010397	Terrestrial Soil	MAKINPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQLLANLPGVSREELRNFMKANNITIKQIHSRKRL*
Ga0134124_113595721	3300010397	Terrestrial Soil	MAKITPDSARVQKLAQRNAAFEKSTGKSAFSPQLRARKTDIGLWCDQGKSEDQILASLGGAISREELKNFLAANKMVIKQIHSRKR*
Ga0134121_124903672	3300010401	Terrestrial Soil	MAKISSRLQKQGEKLSAFEKTTGKSQFSPTLRARRTDITIWCDQGKNEDQILASLGGGISREELKSFMAANGLSIIQMRSLKKK*
Ga0137314_11111751	3300011420	Soil	VLRLHARRVIRMADIPDRLKKQAAKSTAFEKTTGKSAFSPHLRSRRTDIAMWCDQGKNEDQILAMVGGGVSREELKQFMAANNLQLKQIHSRKRT*
Ga0137428_11148202	3300011432	Soil	MAKTPPISSRLQKQNDKNTAFEKTTGKSHFSPNLRAKKTDIAMWCDQGKNEDQILAMVGGGVSREELKSFMAANNYAIKQVHSRKK*
Ga0150985_1030282151	3300012212	Avena Fatua Rhizosphere	MADTPRRLQKQAEKNTAFEKTTGRSHFSPNLRAKRTDIALWCDQGKNEDQILAAIGGGVSREELKSFLAANNLTIKQIHSRK
Ga0150985_1044117851	3300012212	Avena Fatua Rhizosphere	PHLARRAMADIPQRMKKLSDKDTAFEKTTGKSHFSPILRSRKTDIAMWCDQGKNEDQILANLGGVSREELRSFMKTNNLTIKQFKALRKK*
Ga0150985_1057839852	3300012212	Avena Fatua Rhizosphere	MAKITPKINPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIAMWCDQGKNEDQLLANLPGVSREELRNFMKANNLTIKQIHSRKRL*
Ga0150985_1089803081	3300012212	Avena Fatua Rhizosphere	PHLRGTAMADIPQRVKKLTDKDTAFEKTTGKSHFSPTLRSRKSEIALWCDQGKNEDQILAGLGGVSREELRSFMKAKNLTIKQFKALRKK*
Ga0150985_1113033901	3300012212	Avena Fatua Rhizosphere	MADTPRRLQKQAEKNTAFEKTTGRSHFSPNLRAKRTDIAMWCDQGKNEDQILAAIGGGVSREELKSFLAANNLTIKQIHSRKR*
Ga0150985_1136422702	3300012212	Avena Fatua Rhizosphere	MAKIPPKINPRLQKQSDHVKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQLLANLPGVSREELRNFMKANNITIKQIHSRKRF*
Ga0150985_1149964371	3300012212	Avena Fatua Rhizosphere	MAKTTARLQKQDVKNAAFEQSTGKSAFSPTLRTRRTDIAMWCDQGKNEDQIMAAIGSGVSREELKRFLAANNLTIKKIHSRKS*
Ga0150985_1192724391	3300012212	Avena Fatua Rhizosphere	SITKRNVMADIPKRIKKLSEKDTAFEKTTGKSHFSPTLRARKTDIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0150985_1208301972	3300012212	Avena Fatua Rhizosphere	MANTPRRLQKQAEKNTAFEKTTGRSHFSPNLRAKRTDIAMWCDQGKNEDQILAAIGGGVSREELKSFLAANNLTIKQIHSRKG*
Ga0150985_1224435151	3300012212	Avena Fatua Rhizosphere	MAKITPREQKQADKSKSFEQQTGKSAFSPTLRSKRTDIMMWCDQGKNEDQLLANLPGVSREELKNFMKANNIQIKQIHSRKRV*
Ga0137371_112448682	3300012356	Vadose Zone Soil	QRVKKLSDKDTAFEKTTGKSHFSPTLRARKTEIAMWCDQGKNEDQLLASLGGGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0150984_1010767421	3300012469	Avena Fatua Rhizosphere	MAKITPREQKQSDKSKAFEQQTGKSAFSPTLRSKRTDIMMWCDQGKNEDQILANLPGVSREELKNFMKANNMQIKQIHSRKRV*
Ga0150984_1154866221	3300012469	Avena Fatua Rhizosphere	PNSALKLRGTAMADIPQRMKKLNDKDTAFEKTTGKSHFSPILRSRKTDIAMWCDQGKNEDQILANLAGVSREELRSFMKTNNLTIKQFKALRKK*
Ga0150984_1209206532	3300012469	Avena Fatua Rhizosphere	MADIPKRIKKLTEKDTAFEKTTGKSHFSPTLRARKTDIAMWCDQGKNEDQILAGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0150984_1222079602	3300012469	Avena Fatua Rhizosphere	IPMAKFIGRLQKQADKNTAFEKTTGKSHFSPTLRAKRTDIAMWCDQGKNEDQILALIGGGVSREELKSFLTANNLTIKQFKQLKK*
Ga0137397_105064791	3300012685	Vadose Zone Soil	MAKTPDNARLQKQADKHSAFEKTTGKSHFSPTLRARRTEIAMWCDQGKNEDQILAAIGGGVSREELKSFLAANNLTIKQIHSRKR*
Ga0137394_114558351	3300012922	Vadose Zone Soil	MAKTPDNARLQKQADKHSAFEKTTGKSHFSPTLRARRTEIAMWCDQGKNEDQLLAAIGGGVSREELKSFLAANNLTIKQIHSRKR*
Ga0137404_111914291	3300012929	Vadose Zone Soil	RLQKQNDKNTAFEKTTGKSHFSPNLRAKRTDIAMWCDQGKNEDQILAAIGGGVSREELKSFMAANNMTIKQIHSRKK*
Ga0164303_108979051	3300012957	Soil	MRKAMADIPQRVKKLSDKDKAFEKTTGKSHFSPTLRARKSDIAMCCDQGKNEDQILAGLAGVSREELRSYMQANNLTIKQFKSLRKK*
Ga0164299_114025791	3300012958	Soil	MAKIIGRLQKQAEKNTAFEKTTGKSHFSPTLRAKRTDIAMWCDQGKNEDQILAMLGGGVSREELKSFLGANNITIKQFKGLKK*
Ga0164308_115373702	3300012985	Soil	MAKVTPREQKQADKSKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQLLANLPGVSREELRNFMKANN
Ga0164306_105782932	3300012988	Soil	SAFELTRQAMADVPQRVKKLSDKDTAFEKTTGKSHFSPTLRARKSDIAMWCDQGKNEDQILAGLAGVSREELRSYMQANNLTIKQFKSLRKK*
Ga0164306_114370542	3300012988	Soil	MAKVTPREQKQADKSKAFEQQTGKSAFSPTLRSKRTDIMMWADQGKNEDQLLANLPGVSREELRNFMKANNITIKQ
Ga0164305_115435961	3300012989	Soil	MAKIIGRLQKQAEKNTAFEKTTGKSHFSPTLRAKKTDIMMWCDQGKNEDQLLANLPGVSREELRNFMKANNLAIKQIHSRKRL*
Ga0157375_135233772	3300013308	Miscanthus Rhizosphere	LLINVMAKITPKIIPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQILANLPGVSREELRNFMKANNMAIKQIHSRKRL*
Ga0163163_132112721	3300014325	Switchgrass Rhizosphere	KGSAMAKALPSTRLQKQADHGTAFEKQTGKSRFSPTLRARRTDIAMWADQGKNEDQILAQLGGISREELKSFMAENKITIKKVSGKKR*
Ga0137403_103201072	3300015264	Vadose Zone Soil	EMREDQMAKTTPINARLQKQNDKNTAFEKTTGKSHFSPNLRAKRTDIAMWCDQGKNEDQILAAIGGGVSREELKSFMAANNMTIKQIHSRKK*
Ga0132258_126943722	3300015371	Arabidopsis Rhizosphere	MMSQGSIDKEIPMAKIVGRLQKQTEKNTAFEKSTGKSHFSPTLRAKRTDIAMWCDQGKNEDQLLAMVGGGVSREELKSFLAANNLTIKTPKKK*
Ga0132258_130218212	3300015371	Arabidopsis Rhizosphere	MAKIPPKINPRLQKQSEHVKAFEQQTGKSAFSLTLRAKRTDIMMWCDQGKNEDQLLSNLPGVSREELRNFMKANNIT
Ga0132258_139360761	3300015371	Arabidopsis Rhizosphere	MADIPQRVKKLSDKDKAFEKTTGKSHFSPTLRARKSEIAMWCDQGKNEDQILSGLAGVSREELRSFMQANNLTIKQFKSLRKK*
Ga0132255_1033370931	3300015374	Arabidopsis Rhizosphere	MPKPDPKLNPRLQKQADHAKSFEQQTGRPGSAFSPTLRAKRTDIMMWCDQGKNEDQILANLPGVSREELRNFMKANNITIKQIHSRKRL*
Ga0184626_100553373	3300018053	Groundwater Sediment	MAKTPEFGRLKKQAEKNTAFEKSTGKSHFSPALRAKRTDIAMWCDQGKNEDQILANLGGGISREELKQFMAANGMTIKHINALRKK
Ga0184635_100733672	3300018072	Groundwater Sediment	MAKTPGKPTESARVQKLEQHNTAFEKTTGKSAFSPALRARKTEIAMWCDQGKNEDQILANLPGISREELKRFLTANNLTIKKLSAKKR
Ga0184628_100332052	3300018083	Groundwater Sediment	MAKTPPKPTESARVQKLEQHNTAFEKTTGKSAFSPALRARKTEIAMWCDQGKNEDQILANLPGISREELKRFLTANNLTIKKLSAKKR
Ga0190275_125177431	3300018432	Soil	MAKTTESARVKKLNERDTAFEKSTGKSHFSPTLRARRTEIAMWCDQGKNEDQILAALGGISREELKGFLAANNLTIKKVTTRKR
Ga0190271_132971941	3300018481	Soil	DAKNTAFEKTTGKSHFSPNLRSRKTDITMWCDQGKNEDQILAAIGSGVSREELKSFMAANKLVIKKIKSRKR
Ga0173479_103722941	3300019362	Soil	MAKLTPRLQKQDDKAKSFQQQTGKSAFSPTLRSKRTDIAMWCDQGKNEDQILANLPGVSREELRNFMQANNLTIKQIHSRKRF
Ga0163150_104361961	3300020195	Freshwater Microbial Mat	MAKITPREQKQADKSKSFEQQTGKSAFSPTLRAKRTDIMMWCDQGKNEDQILANLSGVSREELKNFMKANNMVIKQIHSRKRV
Ga0247795_11067691	3300022899	Soil	MAKVTSREQKQADKSKAFEQQTGKSAFSPTLRSKRTDIMMWCDQGKNEDQILANLPGVSREELKNFMKANNLQIKQIHSRKR
Ga0247802_10412702	3300023077	Soil	MAKVTSREQKQADKSKAFEQQTGKSAFSPTLRSKRTDIMMWCDQGKNEDQILANLPGVSREELKNFMKANNLQIKQIHSRKRV
Ga0207695_110788261	3300025913	Corn Rhizosphere	MADLPQRLQKQEAKNTAFEKSTGKSHFSPNLRARKTDIAMWCDQGKNEDQILAAVGGGVSREELKSFLAANKLVIKKMKPGKR
Ga0207700_105604291	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDKTPARLNKLATKATAFEKSTGKSAFSPQLRGRRTEIVMWCDQGKTEDQILANLGGISREELRAFMAANNMQIKQIHSRKRT
Ga0207712_108927371	3300025961	Switchgrass Rhizosphere	MAKTTASARVQKLQQRDTAFEKSTGKSAFSPQLRARRTDIALMVDQGKSEDQILAAIGGSISREELKGFLAANNLVIKKLYGRKK
Ga0207703_120271192	3300026035	Switchgrass Rhizosphere	MAKITPDSARVQKLAQHNAAFEKSTGKSAFSPQLRARKTDIGLWCDQGKSEDQILASLGGAISREELKNFLAANKMVIKQIHSRKR
Ga0208685_10373042	3300027513	Soil	MATTPSPSEREKKQEAKNTAFEKTTGKSHFSPNLRARRTDIAMWCDQGKNEDQILASLGGGVSREELRSFMAANKLVIKQMAKLRKK
Ga0209382_111613952	3300027909	Populus Rhizosphere	MAKTPDIGRLKKQADKNTAFEKTTGKSHFSPALRAKRTDIAMWCDQGKNEDQILANLGGGISREELKQFMAANGMTIKKINALRKK
Ga0310813_101433581	3300031716	Soil	MADIPQRMKKLSDKDKAFEKTTGKSHFSPTLRARKTEIAMWCDQGKNEDQILAGLAGVTREELRSFMQANNLTIKQFKSLRKK
Ga0310813_105377132	3300031716	Soil	MAKIPPKINPRLQKQADKSKAFEQQTGKSAFSPTLRAKKTDIMMWCDQGKNEDQLLANLPGVSREELRNFMKANNLTIKQIHSRKRL
Ga0310813_118338142	3300031716	Soil	MADIPQRMKKLSDKDTAFEKTTGKSHFSPILRSRKTDIAMWCDQGKNEDQILANLAGVSREELRSFMKTNNLAIKQFKALRKK
Ga0307416_1023703231	3300032002	Rhizosphere	MADIPERLKKQAVKSTAFEKTTGKSAFSPHLRARRTDIALWCDQGKNEDQILAMVGGGVSREELKQFMAANNLQIKQIHSRKRT
Ga0310812_104084382	3300032421	Soil	MADIPQRVKKLSDKDKAFEKTTGKSHFSPTLRARKSDIAMWCDQGKNEDQILAGLAGVSREELRSYMQANNLTIKQFKSLRKK
Ga0364937_045007_433_693	3300034113	Sediment	MAKTPPISSRLQKQNDKNTALEKTTGKSHFSPNLRAKKTDIAMWCDQGKNEDQILAMVGGGVSREELKSFMAANNYAIKQVHSRKK
Ga0364925_0057508_3_254	3300034147	Sediment	ADIPDRLKKQAAKSTAFEKTTGKSAFSPHLRSRRTDIAMWCDQGKNEDQILAMVGGGVSREELKQFMAANNLTVKQIHSRKRT
Ga0364927_0140380_88_348	3300034148	Sediment	MAKTPPISSLLQKQNDKNTAFEKTTGKSHFSPNLRAKKTDIAMWCDQGKNEDQILAMVGGGVSREELKSFMAANNYAIKQVHSRKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063444

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences