Metagenome / Metatranscriptome Family F063415

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063415
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	56 residues
Representative Sequence	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA
Number of Associated Samples	105
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.06 %
% of genes near scaffold ends (potentially truncated)	20.93 %
% of genes from short scaffolds (< 2000 bps)	74.42 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.674 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.008 % of family members)
Environment Ontology (ENVO)	Unclassified (51.163 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.98% β-sheet: 0.00% Coil/Unstructured: 39.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF05960	DUF885	46.51
PF07336	ABATE	21.71
PF11706	zf-CGNR	20.16
PF02472	ExbD	3.88
PF00583	Acetyltransf_1	2.33
PF13387	DUF4105	0.78
PF10459	Peptidase_S46	0.78
PF04143	Sulf_transp	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	46.51
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	21.71
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	3.88
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.06 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	36.43 %
Unclassified	root	N/A	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	17.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Unclassified	root	N/A	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	17.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Unclassified	root	N/A	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10049828	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300002906\|JGI25614J43888_10183634	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300002908\|JGI25382J43887_10144419	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300005166\|Ga0066674_10001243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8857	Open in IMG/M
3300005172\|Ga0066683_10016765	All Organisms → cellular organisms → Bacteria	4013	Open in IMG/M
3300005172\|Ga0066683_10401997	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005172\|Ga0066683_10438489	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005172\|Ga0066683_10525095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	723	Open in IMG/M
3300005174\|Ga0066680_10048431	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300005174\|Ga0066680_10164023	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005175\|Ga0066673_10027840	All Organisms → cellular organisms → Bacteria → Proteobacteria	2685	Open in IMG/M
3300005175\|Ga0066673_10774593	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005176\|Ga0066679_10025249	All Organisms → cellular organisms → Bacteria → Proteobacteria	3209	Open in IMG/M
3300005176\|Ga0066679_10028186	All Organisms → cellular organisms → Bacteria → Proteobacteria	3066	Open in IMG/M
3300005177\|Ga0066690_10569326	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300005178\|Ga0066688_11014583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300005180\|Ga0066685_10171096	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300005186\|Ga0066676_10727207	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005187\|Ga0066675_10088081	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300005446\|Ga0066686_10103759	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300005447\|Ga0066689_10062444	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300005450\|Ga0066682_10861529	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005451\|Ga0066681_10441941	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005553\|Ga0066695_10371563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	893	Open in IMG/M
3300005553\|Ga0066695_10424467	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005555\|Ga0066692_10063771	All Organisms → cellular organisms → Bacteria → Proteobacteria	2090	Open in IMG/M
3300005556\|Ga0066707_10074117	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300005556\|Ga0066707_10564170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	732	Open in IMG/M
3300005566\|Ga0066693_10055099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1339	Open in IMG/M
3300005586\|Ga0066691_10005730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5454	Open in IMG/M
3300006903\|Ga0075426_10022071	All Organisms → cellular organisms → Bacteria → Proteobacteria	4550	Open in IMG/M
3300006914\|Ga0075436_100763353	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300007255\|Ga0099791_10373421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	685	Open in IMG/M
3300007788\|Ga0099795_10013319	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300009012\|Ga0066710_101845368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	909	Open in IMG/M
3300009012\|Ga0066710_101969409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	869	Open in IMG/M
3300009012\|Ga0066710_104514245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300009038\|Ga0099829_11344298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	590	Open in IMG/M
3300009143\|Ga0099792_10581295	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300009143\|Ga0099792_10603279	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010304\|Ga0134088_10199961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	957	Open in IMG/M
3300010323\|Ga0134086_10065316	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300010336\|Ga0134071_10096223	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300010337\|Ga0134062_10328091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	732	Open in IMG/M
3300012199\|Ga0137383_10014194	All Organisms → cellular organisms → Bacteria → Proteobacteria	5410	Open in IMG/M
3300012199\|Ga0137383_10042764	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300012203\|Ga0137399_10365723	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012204\|Ga0137374_10055954	All Organisms → cellular organisms → Bacteria → Proteobacteria	4009	Open in IMG/M
3300012204\|Ga0137374_10616909	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300012205\|Ga0137362_10913421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300012206\|Ga0137380_11617961	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012208\|Ga0137376_11790410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300012208\|Ga0137376_11796469	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012209\|Ga0137379_10526779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1089	Open in IMG/M
3300012349\|Ga0137387_10045207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2914	Open in IMG/M
3300012353\|Ga0137367_10757598	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012683\|Ga0137398_10575089	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012683\|Ga0137398_10720014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	694	Open in IMG/M
3300012918\|Ga0137396_10048940	All Organisms → cellular organisms → Bacteria → Proteobacteria	2892	Open in IMG/M
3300012922\|Ga0137394_10302821	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300012925\|Ga0137419_10935709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	715	Open in IMG/M
3300012925\|Ga0137419_11826155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300012927\|Ga0137416_11262000	Not Available	667	Open in IMG/M
3300012929\|Ga0137404_11307428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	668	Open in IMG/M
3300012930\|Ga0137407_11190023	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012972\|Ga0134077_10102892	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300012986\|Ga0164304_10703095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	768	Open in IMG/M
3300014166\|Ga0134079_10180611	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300015054\|Ga0137420_1252691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1496	Open in IMG/M
3300015241\|Ga0137418_10153425	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300015245\|Ga0137409_10042802	All Organisms → cellular organisms → Bacteria → Proteobacteria	4337	Open in IMG/M
3300015358\|Ga0134089_10386442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	596	Open in IMG/M
3300015359\|Ga0134085_10351433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	655	Open in IMG/M
3300017654\|Ga0134069_1186745	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300017656\|Ga0134112_10152885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	888	Open in IMG/M
3300017657\|Ga0134074_1041092	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300017659\|Ga0134083_10124463	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018027\|Ga0184605_10049790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1780	Open in IMG/M
3300018028\|Ga0184608_10005075	All Organisms → cellular organisms → Bacteria → Proteobacteria	4227	Open in IMG/M
3300018061\|Ga0184619_10002565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6567	Open in IMG/M
3300018071\|Ga0184618_10437888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	551	Open in IMG/M
3300018431\|Ga0066655_10647108	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300018433\|Ga0066667_10913103	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300018468\|Ga0066662_11478497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	706	Open in IMG/M
3300018482\|Ga0066669_10033327	All Organisms → cellular organisms → Bacteria → Proteobacteria	3073	Open in IMG/M
3300019255\|Ga0184643_1375426	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300019872\|Ga0193754_1000429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3177	Open in IMG/M
3300019882\|Ga0193713_1094171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	837	Open in IMG/M
3300019883\|Ga0193725_1055652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1002	Open in IMG/M
3300019883\|Ga0193725_1122151	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300020004\|Ga0193755_1071469	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300020018\|Ga0193721_1090171	Not Available	791	Open in IMG/M
3300020170\|Ga0179594_10017407	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300020170\|Ga0179594_10379915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300021073\|Ga0210378_10012314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3573	Open in IMG/M
3300021073\|Ga0210378_10152976	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300021086\|Ga0179596_10204091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	963	Open in IMG/M
3300021344\|Ga0193719_10015434	All Organisms → cellular organisms → Bacteria	3237	Open in IMG/M
3300024330\|Ga0137417_1394524	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300024330\|Ga0137417_1459441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1678	Open in IMG/M
3300026277\|Ga0209350_1027192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1728	Open in IMG/M
3300026285\|Ga0209438_1042348	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300026295\|Ga0209234_1011586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3350	Open in IMG/M
3300026300\|Ga0209027_1000446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	14479	Open in IMG/M
3300026301\|Ga0209238_1245389	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300026305\|Ga0209688_1018401	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300026306\|Ga0209468_1060567	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300026309\|Ga0209055_1152467	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300026318\|Ga0209471_1064419	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300026318\|Ga0209471_1077944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1468	Open in IMG/M
3300026319\|Ga0209647_1025019	All Organisms → cellular organisms → Bacteria	3605	Open in IMG/M
3300026319\|Ga0209647_1106978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1319	Open in IMG/M
3300026328\|Ga0209802_1030104	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300026333\|Ga0209158_1091286	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300026334\|Ga0209377_1185245	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300026335\|Ga0209804_1200268	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300026528\|Ga0209378_1120995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1123	Open in IMG/M
3300026550\|Ga0209474_10110056	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300026557\|Ga0179587_10621899	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300027663\|Ga0208990_1095088	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027875\|Ga0209283_10293992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1072	Open in IMG/M
3300027882\|Ga0209590_10524710	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300027903\|Ga0209488_10760729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	690	Open in IMG/M
3300027903\|Ga0209488_10965590	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300028536\|Ga0137415_10434501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1118	Open in IMG/M
3300028828\|Ga0307312_10340116	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300031152\|Ga0307501_10000090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5103	Open in IMG/M
3300031720\|Ga0307469_11227877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.45%
Host-Associated	Host-Associated	1.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.02%
Aquatic	Environmental → Aquatic	5.43%
Plants	Host-Associated → Plants	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.02%
Sediment	Environmental → Aquatic → Sediment	3.10%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.33%
Loam	Environmental → Terrestrial → Soil → Loam	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.10%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100498281	3300002906	Grasslands Soil	MGTMGKGERVAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA*
JGI25614J43888_101836341	3300002906	Grasslands Soil	MGMIGKGERVAAALAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA*
JGI25382J43887_101444192	3300002908	Grasslands Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA*
Ga0066674_100012432	3300005166	Soil	MGAARKGERLAAAIAAVAVSLSILAGMNRLADGYAREALEGPGLDAAKIIACVRSLA*
Ga0066683_100167653	3300005172	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYAREALEGTRLEAGKIIACVRSLA*
Ga0066683_104019972	3300005172	Soil	MGTIGKGERIAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0066683_104384892	3300005172	Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKLIACLRSLA*
Ga0066683_105250951	3300005172	Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNHLADRYAREALEGTKLEAGKIIACVRSLA*
Ga0066680_100484313	3300005174	Soil	MGAAGKGERLAAAIAAVAVSLSILAGLNRLADRYAREALDGPGLDAARIIACVRSLA*
Ga0066680_101640232	3300005174	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPGLDAAKIIACVRSLA*
Ga0066673_100278403	3300005175	Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSAPGKIIACLRSLA*
Ga0066673_107745932	3300005175	Soil	MGPAGKGERLAAAIVAVAVSLSILAGMNRLADGYVREALEGPGLDAAKIIACVRSLA*
Ga0066679_100252492	3300005176	Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKVIACLRSLA*
Ga0066679_100281862	3300005176	Soil	MGAARKGERLVAAIAAVAVSLSILAGMNRLAERYAREALEGTRVEAGKIIACARSLA*
Ga0066690_105693262	3300005177	Soil	MGAARKGERLVAAIAAVAVSLSILAGMNRLADRYAREALEGTRVEAGKIIACARSLA*
Ga0066688_110145832	3300005178	Soil	MRTTGKGERIAAAIAAVAMSLSILAGMNQLADRYVREALDSAPEKIIACLRSLA*
Ga0066685_101710964	3300005180	Soil	MGPAGKGERLAAAIAAVAVSLSILAGMNRLADGYVREALEGPGLDAAKIIACVRSLA*
Ga0066676_107272071	3300005186	Soil	LAAAIAAVAVSLSILAGLNRLADRYAREALDGPGLDAARIIACVRSLA*
Ga0066675_100880812	3300005187	Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSSPGKIIACLRSLA*
Ga0066686_101037592	3300005446	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADGYAREALEGPGLDAAKIIACVRSLA*
Ga0066689_100624442	3300005447	Soil	MATIGKGERIAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0066682_108615291	3300005450	Soil	MGAARRGERLVAAIAAIAVSLSILAGMSRLADGYVREALEGPGLDAAKVIACVRSLA*
Ga0066681_104419411	3300005451	Soil	MGPAGKGERLAAAIVAVAVSLSILAGMNRLADGYAREALEGPGLDAAKIIACVRSLA*
Ga0066695_103715631	3300005553	Soil	MGATRKGERLVAAVAAVAVSLSILAGMNNLADRYVREALEGPGLDAAKII
Ga0066695_104244672	3300005553	Soil	MGTAGKRERLAAAIAAVAVSLSILAGMNHLADRYAREALEGTKLEAGKIIACVRSLA*
Ga0066692_100637713	3300005555	Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0066707_100741173	3300005556	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPGLGAAKIIACVRSLA*
Ga0066707_105641701	3300005556	Soil	MGTIGKGERMAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0066693_100550992	3300005566	Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSAPGKIIACLRSHA*
Ga0066691_100057304	3300005586	Soil	MGAARKGERLVAAIAAVAVSLSILAGMSRLANGYAREALEGPGLDAAKVIACVRSLA*
Ga0075426_100220713	3300006903	Populus Rhizosphere	MGAAGKGERVAAAIAAVAVSLSLLAGLNRLADGYAREAFEAPRLDAGGMRLAPGKIIACLRSLA*
Ga0075436_1007633532	3300006914	Populus Rhizosphere	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYAREALESPGLDAGRIIACVRSLA*
Ga0099791_103734211	3300007255	Vadose Zone Soil	MGTIGKGERIAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRS
Ga0099795_100133192	3300007788	Vadose Zone Soil	MGMIGKGERIAAAIAAVTVSLSILAGMNQLADRYAREALGSAPGKIIACLRSLA*
Ga0066710_1018453681	3300009012	Grasslands Soil	MGPAGKGERLAAAIAAVAVSLSILAGMNRLADGYVREALEGPGLDAAKIIACVRS
Ga0066710_1019694091	3300009012	Grasslands Soil	MGPAGKGERLAAAIVAVAVSLSILAGMNRLADGYVREALEGPGLDAAKIIACVRS
Ga0066710_1045142451	3300009012	Grasslands Soil	YEVTAMGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPGLDAAKIIACVRSLA
Ga0099829_113442981	3300009038	Vadose Zone Soil	MGMIGTVERLAAAIAAVTVSLSILAGMNRLADRYAREALDSAPGKIIACLR
Ga0099792_105812952	3300009143	Vadose Zone Soil	MGMIGKGERIAAAIAAVAVSLSILAGMNQLADRYAREALGPAPGKIIACLRSLA*
Ga0099792_106032792	3300009143	Vadose Zone Soil	MGAAGKGERVAAAIAAVAVSLSILAGMNRLADRYAREALEGTRLEAGKIIACGRSLA*
Ga0134088_101999611	3300010304	Grasslands Soil	MGTAGKVERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0134086_100653161	3300010323	Grasslands Soil	VTAMGAARKGERLAAAIAAVAVSLSILAGMNRLADGYAREALEGPGLDAAKIIACVRSLA
Ga0134071_100962233	3300010336	Grasslands Soil	MGAARKGERLAAAIAAVAVSLSILAGMNSLADRYVREALEGPGLDAAKIIACVRSL
Ga0134062_103280912	3300010337	Grasslands Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSAPGKIIACLRSL
Ga0137383_100141945	3300012199	Vadose Zone Soil	MGTFGTVGKGERLAAAIAAIAVSLSILAGMNSLADRYAREALDTAPGKIIACLRSLA*
Ga0137383_100427642	3300012199	Vadose Zone Soil	MGAAGKGERSAAAIAAVAVSLSILAGMNRLADGYAREALEGPRLEAGGMRPAAGKIIACLRSLA*
Ga0137399_103657233	3300012203	Vadose Zone Soil	METIGKGERIAAAIAAVAVSLSILAGMNQLSDRYVREALGSAPGKIIACLRSLA*
Ga0137374_100559541	3300012204	Vadose Zone Soil	MGTFGTVGKGERLAAAIAAITVSLSILAGMNSLADRYAREALDTAPGKIIACLRSLA*
Ga0137374_106169092	3300012204	Vadose Zone Soil	HDYEVTAMGATGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPRLEAGGMKPGKIIACLRSLA*
Ga0137362_109134212	3300012205	Vadose Zone Soil	MGATGKGERLAAAIAAAAVSLSILAGMNRLADRYVREALEGPRLEAGGMQPGKIIACLRSLA*
Ga0137380_116179611	3300012206	Vadose Zone Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADGYAREALEGPRLEAGGMRPAAGKIIACLRSLA*
Ga0137376_117904102	3300012208	Vadose Zone Soil	MGMIGKGERIAAAIAAVAVSLSILAGMNQLAERYAREALDSAPGKIIACLRSLA*
Ga0137376_117964692	3300012208	Vadose Zone Soil	MGAARKGERLAAAIAAVAVSLSILAGMNRLADGYAREALERPGLNAAKIIACVRSLA*
Ga0137379_105267792	3300012209	Vadose Zone Soil	LAAAIAAITVSLSILAGMNSLADRYAREALDTAPGKIIACLRSLA*
Ga0137387_100452075	3300012349	Vadose Zone Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLSDGYAREALEGPRLEAGGMRLAAGK
Ga0137367_107575982	3300012353	Vadose Zone Soil	MGTFGTVGKGERLAAAIAAITVSLSILAGMNSLADRYTREALDTAPGKIIACLRSLA*
Ga0137398_105750891	3300012683	Vadose Zone Soil	KGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPRLEAGGMKPGKIIACLRSLA*
Ga0137398_107200142	3300012683	Vadose Zone Soil	MGTVGKGERVAAAIAAVAVSLSILAGMNQLADRYAREALASAPGKIIACLRSLA*
Ga0137396_100489402	3300012918	Vadose Zone Soil	MGATGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPRLEAGGMQPGKIIACLRSLA*
Ga0137394_103028212	3300012922	Vadose Zone Soil	MGTMGKGERVAAAIAAVAVSLSILAGMNQLADRYAREALDSTPGKIIACLRSLA*
Ga0137419_109357092	3300012925	Vadose Zone Soil	MGTIGRGERIAAAIAAVAMSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0137419_118261551	3300012925	Vadose Zone Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKII
Ga0137416_112620002	3300012927	Vadose Zone Soil	VRGAAGFLAAGERVAAAIAAVAVSLSILAGMDLLADRYMREALDSAPGKIIACLRSLA*
Ga0137404_113074281	3300012929	Vadose Zone Soil	MGTIGKGERIAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA*
Ga0137407_111900232	3300012930	Vadose Zone Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYAQEALGSAPGKIIACLRSLA*
Ga0134077_101028921	3300012972	Grasslands Soil	GERLVAAIAAVAVSLSILAGMNRLADRYAREALEGPGPDAAKIIACVRSLA*
Ga0164304_107030952	3300012986	Soil	MGTIGKGERLAAAIAAITVSLALLTGMNLIADGYAREALDVAPGKIIACLRSVA*
Ga0134079_101806111	3300014166	Grasslands Soil	MRATGKGERLVAAIAAVAVSLSILAGMTRLADGYSREALDSAPAKIIACLRSLA*
Ga0137420_12526912	3300015054	Vadose Zone Soil	MGAARKGERLAAAIAAVAVSLSILAGMNSLADRYVREALEGPGLDAAKIIACVRSLA*
Ga0137418_101534252	3300015241	Vadose Zone Soil	MGATGKGERLAAAIAAAAVSLSILAGMNRLADRYVREALEGPRLEAGGMKPGKIIACLRSLA*
Ga0137409_100428024	3300015245	Vadose Zone Soil	MGAAGKGERLAAAIAAVAVSLSILAGLNRLADGYAREALEGPRLEAGGMHLAPGKIIACLRSLA*
Ga0134089_103864421	3300015358	Grasslands Soil	MGTIGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA*
Ga0134085_103514331	3300015359	Grasslands Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYAREALEGTRLEAGKIIACVRS
Ga0134069_11867452	3300017654	Grasslands Soil	MGAAGKGERLAAAIAAVAVSLSILAGLNRLADGYARAALEGPRLEAGGMRLAPGKIIACLRSLA
Ga0134112_101528852	3300017656	Grasslands Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA
Ga0134074_10410922	3300017657	Grasslands Soil	MGPAGKGERLAAAIAAVAVSLSILAGMNRLADRYAREVLEGTRLEAGKIIACVRSLA
Ga0134083_101244631	3300017659	Grasslands Soil	METIGKGERIAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA
Ga0184605_100497902	3300018027	Groundwater Sediment	MGATGKRERLAAAIAAVAVSLSILAGMNHLADRYAREALDIAPGKIIACLRSLA
Ga0184608_100050752	3300018028	Groundwater Sediment	MGAAGKGERLAAAIAAVAVSLSILAGMTRLADGYAREALESPRLEAVKIIACLRSLA
Ga0184619_100025654	3300018061	Groundwater Sediment	MGAAGKRERLAAAIAAVAVSLSILAGMNHLADRYAREALDIAPGKIIACLRSLA
Ga0184618_104378882	3300018071	Groundwater Sediment	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIA
Ga0066655_106471082	3300018431	Grasslands Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYAREALEGTRLEAGKIIACVRSLA
Ga0066667_109131032	3300018433	Grasslands Soil	MGPAGKGERLAAAIVAVAVSLSILAGMNRLADGYVREALEGPGLDAAKIIACVRSLA
Ga0066662_114784972	3300018468	Grasslands Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPGLDAAKIIACVRSLA
Ga0066669_100333271	3300018482	Grasslands Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSAPGKIIACLRSLA
Ga0184643_13754262	3300019255	Groundwater Sediment	MGAAGKGERLAAAIAAVAVSLSILAGMTRLADGYAREALESPRLEAVKIITCARSLA
Ga0193754_10004294	3300019872	Soil	MGTIGKGERLVAAIAAVTVSLAILTGMNRIADGYVRGTLDSAPGKIIACLRSLA
Ga0193713_10941712	3300019882	Soil	MGTTGKGERVAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA
Ga0193725_10556522	3300019883	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNQLAGRYAREALEAPRLEAGGTRPGKITACVRSLA
Ga0193725_11221512	3300019883	Soil	MGTMGKGERVAAAIAAVAVSLSILAGMNQLADRYAREAFGSAPGKIIACLRSLA
Ga0193755_10714692	3300020004	Soil	MEAAGKGERLAAAIAAVAVSLSILAGMNQLAGRYVREALEAPRLEAGGTRPGKIIACVRSLA
Ga0193721_10901711	3300020018	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMSRLADGYAREALEGPRLEAGGMRPVPGKIIACLRSLA
Ga0179594_100174071	3300020170	Vadose Zone Soil	MGTMGKGERVAAALAAVAVSLSILAGMNQLADRYAREALGSAPGKIIACLRSLA
Ga0179594_103799152	3300020170	Vadose Zone Soil	MGATGKGERLAAAIAAAAVSLSILAGMNRLADRYVREALEGPRLEAGGMKPGKIIACLRSLA
Ga0210378_100123145	3300021073	Groundwater Sediment	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA
Ga0210378_101529762	3300021073	Groundwater Sediment	MGATGKKERLAAAIAAVAVSLSILAGMTRLADGYAREALESPRLEAVKIIACLRSLA
Ga0179596_102040912	3300021086	Vadose Zone Soil	MGMIGKGERVAAALAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA
Ga0193719_100154344	3300021344	Soil	MGTIGIGERLVAAIAAVTVSLAILTGMNRIADGYVRGTLDSAPGKIIACLRSLA
Ga0137417_13945242	3300024330	Vadose Zone Soil	MGTIGKGERIAAAIAAVAVSLSILAGMNQLADRYVREALDSTPGKIIACLRSLA
Ga0137417_14594414	3300024330	Vadose Zone Soil	MGTIGRGERIAAAIAAVAMSLSILAGMNQLGGSLRAGGARLGSRKIIACLRSLA
Ga0209350_10271923	3300026277	Grasslands Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSSPGKIIACLRSLA
Ga0209438_10423482	3300026285	Grasslands Soil	MGTMGKGERVAAAIAAVAVSLSILAGMNQLADRYAREALDSAPGKIIACLRSLA
Ga0209234_10115862	3300026295	Grasslands Soil	MGAAGNGERLAAAIAAVAVSLSILAGLNRLADRYVREALEGPGVDTAKIIACVRSLA
Ga0209027_100044614	3300026300	Grasslands Soil	MGAAGNGERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSSPGKIIACLRSLA
Ga0209238_12453892	3300026301	Grasslands Soil	MGAARKSERLVAAIAAIAVSLSILTGMSRLADGYVRETLEGPGLDAAKIIACVRSLA
Ga0209688_10184012	3300026305	Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSAPGKIIACLRSHA
Ga0209468_10605672	3300026306	Soil	MGAARKGERLAAAIAAVAVSLSILAGMNRLADGYAREALEGPGLDAAKIIACVRSLA
Ga0209055_11524672	3300026309	Soil	MGAAGKGERLAAAIAAVAVSLSILAGLNRLAERYAREALDGPGLDAARIIACVRSLA
Ga0209471_10644192	3300026318	Soil	MGTAGKGERLAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKVIACLRSLA
Ga0209471_10779442	3300026318	Soil	MGAARKGERLVAAIAAVAVSLSILAGMNRLAERYAREALEGTRVEAGKIIACARSLA
Ga0209647_10250194	3300026319	Grasslands Soil	MGATGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPRLEAGSMKPGKIIACLRSLA
Ga0209647_11069782	3300026319	Grasslands Soil	MGTMGKGERVAAAIAAVAVSLSMLAGMNQLADRYAREALDSAPGKIIACLRSLA
Ga0209152_104377491	3300026325	Soil	MGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSSPGKI
Ga0209802_10301043	3300026328	Soil	MGAAGKGERLAAAIAAVAVSLSILAGLNRLADRYAREALDGPGLDAARIIACVRSLA
Ga0209158_10912862	3300026333	Soil	LVAAIAAVAVSLSILAGMNRLADGYVREALEAPGLDAAKVIACVRSLA
Ga0209377_11852452	3300026334	Soil	MGTIGKGERMAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA
Ga0209804_12002682	3300026335	Soil	MVYEVTAMGAARKGERLVAAIAAVAVSLSILAGMNRLADRYAREALEGTRVEAGKIIACARSLA
Ga0209378_11209953	3300026528	Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYVREALEGPGLGAAKIIACVRSLA
Ga0209474_101100562	3300026550	Soil	YAMGAAGKRERLAAAIAAVAVSLSILAGLNRLADRYAQEALDSSPGKIIACLRSLA
Ga0179587_106218992	3300026557	Vadose Zone Soil	GERLAAAIAAVAVSLSILAGMNSLADRYVREALEGPGLDAAKIIACVRSLA
Ga0208990_10950882	3300027663	Forest Soil	MGAARKGERLAAAIAAVAVSLSILAGMNSIADRYVREALEGPGLDAAKIIACVRSLA
Ga0209283_102939923	3300027875	Vadose Zone Soil	MGTIGKGERVAAAIAAVAVSLSILAGMNQLADRYVREALDSAPGKIIACLRSLA
Ga0209590_105247101	3300027882	Vadose Zone Soil	MGAAGKGERLAAAIAAVAVSLSILAGMNRLADRYAQEALDSAPGKIIACLRSLA
Ga0209488_107607291	3300027903	Vadose Zone Soil	MGMIGKGERIAAAIAAVAVSLSILAGMNQLADRYAREALGPAPGKIIACLRSLA
Ga0209488_109655902	3300027903	Vadose Zone Soil	MGAAGKGERVAAAIAAVAVSLSILAGMNRLADRYAREALEGTRLEAGKIIACGRSLA
Ga0137415_104345012	3300028536	Vadose Zone Soil	MGMIGKGERIAAAIAAVAVSLSILAGMNQLADRYAREALGSAPGKIIACLRSLA
Ga0307312_103401161	3300028828	Soil	TAMGAAGKGERLAAAIAAVAVSLSILAGMTRLADGYAREALESPRLEAVKIIACLRSLA
Ga0307501_100000904	3300031152	Soil	MGAAGKGERMAAAIAAVAVSLSILAGMNRLANGYVREALEGPGVDTAKIIACVRSLA
Ga0307469_112278772	3300031720	Hardwood Forest Soil	MGAAGKKERLAAAIAAVAVSLSLLAGMNRLADRYAREALESAPGKIIACLRSLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063415

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences