Metagenome / Metatranscriptome Family F063347

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063347
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	49 residues
Representative Sequence	MAQTTFSGPVTSNAGFNSDDTLTAADYTSGSYNLTDFTVRPAATWTGTVA
Number of Associated Samples	65
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.16 %
% of genes near scaffold ends (potentially truncated)	91.47 %
% of genes from short scaffolds (< 2000 bps)	77.52 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.295 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (59.690 % of family members)
Environment Ontology (ENVO)	Unclassified (67.442 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (70.543 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.97% β-sheet: 12.82% Coil/Unstructured: 78.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF10124	Mu-like_gpT	21.71
PF13640	2OG-FeII_Oxy_3	2.33
PF00166	Cpn10	2.33
PF11351	GTA_holin_3TM	1.55
PF03237	Terminase_6N	0.78
PF00583	Acetyltransf_1	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	2.33

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
All Organisms	root	All Organisms	21.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
cellular organisms	root	All Organisms → cellular organisms	11.63 %
Viruses	superkingdom	All Organisms → Viruses	10.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.85 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.20 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.33 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.78 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.33 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.78 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.20 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.33 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.78 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	4.65 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2.33 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	1.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.78 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.78 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.29 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.65 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2.33 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.78 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.78 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003395\|JGI25917J50250_1055221	Not Available	843	Open in IMG/M
3300003429\|JGI25914J50564_10016413	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300003497\|JGI25925J51416_10019185	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300003497\|JGI25925J51416_10053476	Not Available	1061	Open in IMG/M
3300004126\|Ga0066179_10245146	Not Available	511	Open in IMG/M
3300004836\|Ga0007759_11530722	Not Available	1109	Open in IMG/M
3300005580\|Ga0049083_10110100	Not Available	952	Open in IMG/M
3300005580\|Ga0049083_10153088	Not Available	791	Open in IMG/M
3300005580\|Ga0049083_10301615	Not Available	536	Open in IMG/M
3300005581\|Ga0049081_10335151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300005585\|Ga0049084_10113575	Not Available	965	Open in IMG/M
3300007861\|Ga0105736_1152772	Not Available	529	Open in IMG/M
3300008055\|Ga0108970_10701311	Not Available	634	Open in IMG/M
3300008266\|Ga0114363_1083774	Not Available	1182	Open in IMG/M
3300008267\|Ga0114364_1009483	All Organisms → cellular organisms → Bacteria → Proteobacteria	4558	Open in IMG/M
3300009056\|Ga0102860_1144642	Not Available	671	Open in IMG/M
3300013372\|Ga0177922_10482701	Not Available	1157	Open in IMG/M
3300015050\|Ga0181338_1000141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15872	Open in IMG/M
3300015050\|Ga0181338_1005956	Not Available	2060	Open in IMG/M
3300015050\|Ga0181338_1032353	Not Available	794	Open in IMG/M
3300015050\|Ga0181338_1059968	Not Available	548	Open in IMG/M
3300017716\|Ga0181350_1002310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	5573	Open in IMG/M
3300017722\|Ga0181347_1004015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4915	Open in IMG/M
3300017722\|Ga0181347_1021303	Not Available	2046	Open in IMG/M
3300017722\|Ga0181347_1056625	Not Available	1176	Open in IMG/M
3300017722\|Ga0181347_1061338	Not Available	1120	Open in IMG/M
3300017723\|Ga0181362_1031671	Not Available	1125	Open in IMG/M
3300017723\|Ga0181362_1124733	Not Available	503	Open in IMG/M
3300017736\|Ga0181365_1030585	Not Available	1359	Open in IMG/M
3300017736\|Ga0181365_1116447	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	642	Open in IMG/M
3300017736\|Ga0181365_1131690	Not Available	597	Open in IMG/M
3300017761\|Ga0181356_1017638	All Organisms → cellular organisms → Bacteria → Proteobacteria	2644	Open in IMG/M
3300017761\|Ga0181356_1049981	Not Available	1444	Open in IMG/M
3300017761\|Ga0181356_1091718	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	998	Open in IMG/M
3300017761\|Ga0181356_1218819	Not Available	555	Open in IMG/M
3300017761\|Ga0181356_1243751	Not Available	514	Open in IMG/M
3300017774\|Ga0181358_1154649	Not Available	781	Open in IMG/M
3300017777\|Ga0181357_1213919	Not Available	683	Open in IMG/M
3300017777\|Ga0181357_1332471	Not Available	509	Open in IMG/M
3300017778\|Ga0181349_1183662	Not Available	732	Open in IMG/M
3300017778\|Ga0181349_1252276	Not Available	588	Open in IMG/M
3300017778\|Ga0181349_1262269	Not Available	572	Open in IMG/M
3300017778\|Ga0181349_1279219	Not Available	547	Open in IMG/M
3300017780\|Ga0181346_1022514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2644	Open in IMG/M
3300017780\|Ga0181346_1308454	Not Available	535	Open in IMG/M
3300017784\|Ga0181348_1001113	Not Available	11804	Open in IMG/M
3300017784\|Ga0181348_1001879	All Organisms → cellular organisms → Bacteria → Proteobacteria	9303	Open in IMG/M
3300017784\|Ga0181348_1200678	Not Available	715	Open in IMG/M
3300017785\|Ga0181355_1065667	Not Available	1528	Open in IMG/M
3300017785\|Ga0181355_1141579	Not Available	975	Open in IMG/M
3300019784\|Ga0181359_1054934	Not Available	1532	Open in IMG/M
3300019784\|Ga0181359_1090725	Not Available	1133	Open in IMG/M
3300019784\|Ga0181359_1119128	Not Available	946	Open in IMG/M
3300019784\|Ga0181359_1131437	Not Available	882	Open in IMG/M
3300019784\|Ga0181359_1234248	Not Available	568	Open in IMG/M
3300021963\|Ga0222712_10321438	Not Available	963	Open in IMG/M
3300022190\|Ga0181354_1001609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4956	Open in IMG/M
3300022190\|Ga0181354_1016098	All Organisms → Viruses	2309	Open in IMG/M
3300022190\|Ga0181354_1023380	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1980	Open in IMG/M
3300022190\|Ga0181354_1039993	Not Available	1553	Open in IMG/M
3300022190\|Ga0181354_1121789	Not Available	837	Open in IMG/M
3300022190\|Ga0181354_1199229	Not Available	597	Open in IMG/M
3300022190\|Ga0181354_1237661	Not Available	525	Open in IMG/M
3300022190\|Ga0181354_1241283	Not Available	519	Open in IMG/M
3300022407\|Ga0181351_1025765	All Organisms → Viruses	2497	Open in IMG/M
3300022407\|Ga0181351_1042601	Not Available	1914	Open in IMG/M
3300022407\|Ga0181351_1078810	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1317	Open in IMG/M
3300022407\|Ga0181351_1265710	Not Available	524	Open in IMG/M
3300022407\|Ga0181351_1271848	Not Available	514	Open in IMG/M
3300027157\|Ga0255204_1036612	Not Available	931	Open in IMG/M
3300027193\|Ga0208800_1060820	Not Available	515	Open in IMG/M
3300027375\|Ga0255137_1006082	All Organisms → Viruses	3272	Open in IMG/M
3300027418\|Ga0208022_1113579	Not Available	551	Open in IMG/M
3300027563\|Ga0209552_1021219	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300027621\|Ga0208951_1105201	Not Available	767	Open in IMG/M
3300027621\|Ga0208951_1181377	Not Available	534	Open in IMG/M
3300027627\|Ga0208942_1178686	Not Available	556	Open in IMG/M
3300027644\|Ga0209356_1026107	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300027649\|Ga0208960_1016022	All Organisms → Viruses	3048	Open in IMG/M
3300027656\|Ga0209357_1112532	Not Available	757	Open in IMG/M
3300027688\|Ga0209553_1053829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1571	Open in IMG/M
3300027688\|Ga0209553_1064587	Not Available	1396	Open in IMG/M
3300027688\|Ga0209553_1195098	Not Available	662	Open in IMG/M
3300027688\|Ga0209553_1253674	Not Available	549	Open in IMG/M
3300027732\|Ga0209442_1141707	Not Available	933	Open in IMG/M
3300027744\|Ga0209355_1290378	Not Available	625	Open in IMG/M
3300027808\|Ga0209354_10356754	Not Available	574	Open in IMG/M
3300031566\|Ga0307378_10929666	Not Available	716	Open in IMG/M
3300031673\|Ga0307377_10179023	Not Available	1662	Open in IMG/M
3300031673\|Ga0307377_10549764	Not Available	833	Open in IMG/M
3300031707\|Ga0315291_10412457	Not Available	1281	Open in IMG/M
3300031707\|Ga0315291_11439367	Not Available	546	Open in IMG/M
3300031746\|Ga0315293_10029148	Not Available	4885	Open in IMG/M
3300031746\|Ga0315293_10259660	Not Available	1407	Open in IMG/M
3300031746\|Ga0315293_10876213	Not Available	650	Open in IMG/M
3300031758\|Ga0315907_10629371	Not Available	828	Open in IMG/M
3300031772\|Ga0315288_11552754	Not Available	543	Open in IMG/M
3300031772\|Ga0315288_11702037	Not Available	508	Open in IMG/M
3300031834\|Ga0315290_11685347	Not Available	509	Open in IMG/M
3300031885\|Ga0315285_10211518	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1536	Open in IMG/M
3300031885\|Ga0315285_10340801	Not Available	1101	Open in IMG/M
3300031885\|Ga0315285_10403632	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	976	Open in IMG/M
3300031952\|Ga0315294_10324091	Not Available	1471	Open in IMG/M
3300031952\|Ga0315294_10582618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1005	Open in IMG/M
3300031952\|Ga0315294_11479967	Not Available	532	Open in IMG/M
3300032053\|Ga0315284_12511985	Not Available	501	Open in IMG/M
3300032092\|Ga0315905_11484443	Not Available	533	Open in IMG/M
3300032093\|Ga0315902_10336700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1404	Open in IMG/M
3300032118\|Ga0315277_11127921	Not Available	703	Open in IMG/M
3300032143\|Ga0315292_11042331	Not Available	678	Open in IMG/M
3300032163\|Ga0315281_11141226	Not Available	782	Open in IMG/M
3300032177\|Ga0315276_10221242	Not Available	1994	Open in IMG/M
3300032177\|Ga0315276_12188465	Not Available	560	Open in IMG/M
3300032275\|Ga0315270_10133713	Not Available	1480	Open in IMG/M
3300032342\|Ga0315286_11488311	Not Available	649	Open in IMG/M
3300032401\|Ga0315275_10344293	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1670	Open in IMG/M
3300032516\|Ga0315273_10417777	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1806	Open in IMG/M
3300033233\|Ga0334722_10054406	Not Available	3143	Open in IMG/M
3300033233\|Ga0334722_10875399	Not Available	634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.90%
Terrestrial	Environmental → Terrestrial	2.33%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	93.02%
Marine	Environmental → Aquatic → Marine	3.88%
Soil	Environmental → Terrestrial → Soil	2.33%
Leaf	Host-Associated → Plants → Leaf	0.78%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	66.67%
Lake	Environmental → Aquatic → Freshwater → Lake	22.48%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.33%
Clay	Environmental → Terrestrial → Soil → Clay	2.33%
River	Environmental → Aquatic → Freshwater → River	1.55%
Coastal	Environmental → Aquatic → Marine → Coastal	0.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	66.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	20.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.33%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.33%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	59.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	20.16%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	6.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.33%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.33%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.33%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.55%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.55%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.78%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.78%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.78%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004836	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300027157	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027375	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8d	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25917J50250_10552212	3300003395	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSG
JGI25914J50564_100164135	3300003429	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTV
JGI25925J51416_100191856	3300003497	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATY
JGI25925J51416_100534761	3300003497	Freshwater Lake	MAQTTFSGPVTSNAGFNSXDTLTSADLSSGGFNLTDFTVRPAATYSG
Ga0066179_102451462	3300004126	Freshwater Lake	LEKLGEYIMAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTD
Ga0007759_115307221	3300004836	Freshwater Lake	MARTTFSGPVTSQAGFNSDDTLNATDLASGAFNLTDFTVRPAVSYTGTVAALVGAVNQRTAGVS
Ga0049083_101101001	3300005580	Freshwater Lentic	MGTTTFSGPVVSNAGFTSDDTLNATDLATGAYNLTDFTVRPAANWSG
Ga0049083_101530881	3300005580	Freshwater Lentic	MAQTTFSGPVTSKAGFNSDDTLTAADYTSGSFNLTDFT
Ga0049083_103016151	3300005580	Freshwater Lentic	MAQTTFSGPVTSKAGFNSDDTLTTADYTSGSYNLTDFT
Ga0049081_103351512	3300005581	Freshwater Lentic	MAQTTFSGPVTSKAGFNSDDTLTAADYTSGSFNLTDFTVRPAATWTGTVA
Ga0049084_101135752	3300005585	Freshwater Lentic	MAQTTFSGPVTSNAGFNSDDTLTATDLTSGGYNLTDFTVRPAATWTGTVAALVGAA
Ga0105736_11527722	3300007861	Estuary Water	MAQTTFSGPVTSNAGFNSDDTLTAADYTAGSYNLTDFTVRPAATWTGTV
Ga0108970_107013111	3300008055	Estuary	MAQTTFAGPVTSNAGFNSDDTLTAADYTSGSYNLTDFT
Ga0114363_10837742	3300008266	Freshwater, Plankton	MAQTTFAGPVTSNAGFNSDDTLTSADYTSGSFNLTDF
Ga0114364_10094831	3300008267	Freshwater, Plankton	LEKLGEYIMAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYAG
Ga0102860_11446421	3300009056	Estuarine	MAQTTFAGPVTSNAGFNSDDTLTAADYTSGSYNLTDFTVRPA
Ga0177922_104827011	3300013372	Freshwater	MAQTTFSGPVTSNAGFNSDDTLTAADYTSGSYNLTDFTVRPAATWTGTVA
Ga0181338_100014115	3300015050	Freshwater Lake	MGTTTFSGPVVSNAGFTSDDTLTASDLSTGAYNLTDFTVRPAANWSGTVAALVGAAN
Ga0181338_10059564	3300015050	Freshwater Lake	MGTTTFSGPVISDSGFSSDDTLTASDLSTGSFNLTDFTVRPAANWSGTVAALVGASNSR
Ga0181338_10323532	3300015050	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTVADYTSNSSYNLTDFTVRPAATWTG
Ga0181338_10599681	3300015050	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVNYVAGSYNLTDFTVRPASTWTGTGAALVGAANSRTAG
Ga0181350_10023109	3300017716	Freshwater Lake	MATTTFSGPVVSNAGFSSDDTLNSADLSTGSYNLTDFTVRPASTWTGTVAALVGAVN
Ga0181347_10040151	3300017722	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAATWTGTVAALV
Ga0181347_10213034	3300017722	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTATDLTTGSYNLTDFTVRPAAT
Ga0181347_10566251	3300017722	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVAGSYNLTDFTVRPAATWTGTV
Ga0181347_10613382	3300017722	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTAADYTSGSYNLTDFTVRPAATW
Ga0181347_11214961	3300017722	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVSGSYNLTDFTVRPA
Ga0181362_10316711	3300017723	Freshwater Lake	MGTTTFSGPVVSNAGFSSDDTLTAADLSSGSYNLTDFT
Ga0181362_11247331	3300017723	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTVAAVVGAV
Ga0181365_10305851	3300017736	Freshwater Lake	MAQTTFSGPVTSQNGCNSDDTLTAADYVAGSYNLTDFTVRPAATWTGTVAALVGAANS
Ga0181365_10744471	3300017736	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVAGSYNLTD
Ga0181365_11164471	3300017736	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVAGSYNLTDFTVRPAATWANT
Ga0181365_11316901	3300017736	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSTGSFNLTDF
Ga0181356_10176381	3300017761	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAATWTGTVAALVGAANSRTAGV
Ga0181356_10499813	3300017761	Freshwater Lake	MATTTFSGPVVSNAGFSSDDTLNSADLSTGSYNLTDFTVRPASTWTGTVA
Ga0181356_10917183	3300017761	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVAGSYNLTDFTVRPASTWTGTV
Ga0181356_12188192	3300017761	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTATDLSTGSYNLTDFTVRPAATWTGTVAALVGAANSR
Ga0181356_12437512	3300017761	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTVAAVVGAVN
Ga0181358_11238521	3300017774	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVSGSYNLTDFTV
Ga0181358_11546493	3300017774	Freshwater Lake	MGTTTFSGPVVSDSGFSSDDTLSASDLSTGSFNLTDFTVRPAANWAGTVAALVGAS
Ga0181357_12139191	3300017777	Freshwater Lake	MAQTTFAGPVTSNAGFNSDDTLTATDLTTGSYNLTDFT
Ga0181357_12555351	3300017777	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVSGSYNLTDFTVR
Ga0181357_13324711	3300017777	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLNATDLSTGSYNLTDFTVRPAATWAGTVAALVGAAN
Ga0181349_11836622	3300017778	Freshwater Lake	MAQTTFSGPVTSQAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTV
Ga0181349_12522761	3300017778	Freshwater Lake	MGQTTFSGPVTSNAGFNSDDTLTSADYTSGSYNLTD
Ga0181349_12622691	3300017778	Freshwater Lake	MAQTTFSGPVTSKAGFNSDDTLTTADYTSGSYNLTDFTVRPAAT
Ga0181349_12792191	3300017778	Freshwater Lake	MGTTTFSGPVVSNAGFTSDDTLNATDLATGAYNLTDFTVRPAANWSGTVAALVGASNSRTAGV
Ga0181346_10225145	3300017780	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAATWTGTVAAL
Ga0181346_13084542	3300017780	Freshwater Lake	MGTTTFSGPVVSNAGFTSDDTLNATDLATGAYNLTDFTVRPAANWSGTVAALVGAANSRT
Ga0181348_10011131	3300017784	Freshwater Lake	MGQTTFSGPVTSKAGFNSDDTLNSTDLALGAYNLTDFTVRPAATYTGTVAALVGAVNQR
Ga0181348_100187910	3300017784	Freshwater Lake	MATTTFSGPVVSNAGFSSDDTLNSADLSTGSYNLTDFTVRPASTWTGTVAALVGA
Ga0181348_11079573	3300017784	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVAGSYNLTDFTVR
Ga0181348_12006781	3300017784	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAATGTGTVAALVGAANSRT
Ga0181355_10656671	3300017785	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVAGSYNLTDFTVRPAATWANTVAALVGAANSR
Ga0181355_11415792	3300017785	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSTGSFNLTDFTVRPTSNW
Ga0181359_10549342	3300019784	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSTGSFNLTDFTVRPAATWTGTVLILL
Ga0181359_10907251	3300019784	Freshwater Lake	MGTTTFSGPVVSDSGFSSDDTLSASDLSTGSFNLTDFTVRPAANWAGTVAAL
Ga0181359_11191281	3300019784	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAATWTGTVAALVGA
Ga0181359_11314372	3300019784	Freshwater Lake	MAQTTFSGPVTSNAGFNSDETLTAADYVSGEYNLTDFTVRPAAS
Ga0181359_11805661	3300019784	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVAGSYNLTDFTV
Ga0181359_12342481	3300019784	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTATDLTTGSYNLTDFT
Ga0222712_103214381	3300021963	Estuarine Water	MAQTTFAGPVTSNAGFNSDDTLTASDLSTGSYNLTDFT
Ga0181354_10016091	3300022190	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSTGAFNLTDFTVRPAATYSG
Ga0181354_10160981	3300022190	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTAADYTSGSYNLTDFTVRPAATWTGTVAALVGAANSRTAGV
Ga0181354_10233801	3300022190	Freshwater Lake	MSTTTFSGPVVSGAGFTSDDTINASNLTSGSSFNLTDFTVRPTATYTGTVAALVGSV
Ga0181354_10399931	3300022190	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAATWTG
Ga0181354_11217891	3300022190	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTAADLSTGSYNLTDFTVRPASTWTGTVAALVGA
Ga0181354_11833892	3300022190	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVAGSYNLTDFT
Ga0181354_11992291	3300022190	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTLTAADYVAGSYNLTDFTVRPAATWTGTVAALVGAANSRTAG
Ga0181354_12158951	3300022190	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVAGSYNLT
Ga0181354_12376612	3300022190	Freshwater Lake	MGTTTFSGPVISDSGFSSDDTLNASDLSTGSFNLTDFTVRPAANWGGTVAALV
Ga0181354_12412832	3300022190	Freshwater Lake	MAQTTFSGPVTSQAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTVAA
Ga0181351_10257655	3300022407	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLNATDLSTGSYNLTDFTVRPAATWTGTVAA
Ga0181351_10426014	3300022407	Freshwater Lake	MAQTTFSGPVTSKGGFNSDDTLTSADYTSGSYNLTDFTVRPAAT
Ga0181351_10788101	3300022407	Freshwater Lake	MAQTTFAGPVTSNAGFNSDDTLTAADYVSGSYNLTDFTVRPAATWTGTVAA
Ga0181351_11850622	3300022407	Freshwater Lake	MAQTTFSGPVTSQNGFNSDDTPTTVDYVSGSYNLTDF
Ga0181351_12657102	3300022407	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTAADYVSGSYNLTDFTVRPASTWTGT
Ga0181351_12718482	3300022407	Freshwater Lake	MAQTTFSGPVTSKAGFNSDDTLTTADYTSGSYNLTDFTVRPAATWTGTVSALVGAAN
Ga0255204_10366121	3300027157	Freshwater	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLT
Ga0208800_10608201	3300027193	Estuarine	MAQTTFSGPVTSNVGFNSDDTLTSADYTSGSFNLTDFTVRPAATYAGTVAALVGAVNQRTAGVSG
Ga0255137_10060827	3300027375	Freshwater	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYS
Ga0208022_11135791	3300027418	Estuarine	MAQTTFAGPVTSNAGFNSDDTLTAADYVSGSFNLTD
Ga0209552_10212191	3300027563	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYAGTVAA
Ga0208951_11052011	3300027621	Freshwater Lentic	MAQTTFSGPVTSKAGFNSDDTLTAADYTSGSFNLTDFTVR
Ga0208951_11813771	3300027621	Freshwater Lentic	MAQTTFSGPVTSNNGFNSDDTLTAADYVSGSYNLTDFTVRPAATWTGTVAALVGA
Ga0208942_11786861	3300027627	Freshwater Lentic	MAQTTFSGPVTSNAGFNSDDTLTATDLTTGSYNLTDFTVRPAATWT
Ga0209356_10261074	3300027644	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGT
Ga0208960_10160221	3300027649	Freshwater Lentic	MAQTTFSGPVTSKAGFNSDDTLTAADYTSGSFNLTDFTVRPAATWTGTVAALVGAANHRTAGV
Ga0209357_11125321	3300027656	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTVAAVVG
Ga0209553_10538291	3300027688	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTVAAVVGA
Ga0209553_10645871	3300027688	Freshwater Lake	MSTTTFSGPVVSGAGFTSDDTINASNLTSGSSFNLTDFTVRPTATYTGTVAALV
Ga0209553_11950981	3300027688	Freshwater Lake	MAQTTFSGPVTSQAGFNSDDTLNATDLASGAFNLTDFTVRPAVTYTGTVAA
Ga0209553_12536742	3300027688	Freshwater Lake	MGTTTFSGPVVSNAGFSSDDTLTAADLSSGSYNLTDFTVRPAATW
Ga0209442_11417072	3300027732	Freshwater Lake	MGQTTFSGPVTSNAGFNSDDTLIAADYTSGSYNLTDFTVRPAATWTGTVSALVGAANS
Ga0209355_12903781	3300027744	Freshwater Lake	MAQTTFSGPVTSNAGFNSDETLTAADYVSGEYNLTDFTVRPAASWTGTVAALVGAANSRT
Ga0209354_103567541	3300027808	Freshwater Lake	MAQTTFSGPVTSNAGFNSDDTLTAADYTSGSYNLTDFTVRPAAT
Ga0209354_104337321	3300027808	Freshwater Lake	MAQTTFSGPVTSNNGFNSDDTLTAADYVSGSYNLT
Ga0307378_109296661	3300031566	Soil	MAQTTFSGPVTSNAGFNSDDTLTAADLSSGGFNLTNFTVRPAATYANTVA
Ga0307377_101790233	3300031673	Soil	MASTTFSGPVTSNAGFNSDDTLNSNDLSTGAFNLTNFTVRPAATYTGTVAALVGAVNQRTAG
Ga0307377_105497641	3300031673	Soil	MASTTFSGPVTSNAGFNSDDTLNSNDLSTGAFNLTNFTVRPAATYTGTVAALVG
Ga0315291_104124573	3300031707	Sediment	MAQTTFSGPVTSKAGFNSDDTLTATDLTTGSYNLTD
Ga0315291_114393672	3300031707	Sediment	MGQTTFSGPVTSKAGFNSDDTLDSADLASGSYNLADFTVRPAVTYTG
Ga0315293_100291481	3300031746	Sediment	MGQTTFSGPVTSKAGFNSDDTLDSADLASGSYNLADFTVRPAVTYTGTVAALVGAVNQRTAGVSGA
Ga0315293_102596601	3300031746	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLTDFTVRPAVTYTGTVAALVGAVNQRT
Ga0315293_108762131	3300031746	Sediment	MGQTTFSGPVTSKAGFNSDDTLNATDLASGSYNLADFTVRPAVTYTGTVAALVGAVNQRTAGVSGA
Ga0315907_106293711	3300031758	Freshwater	MAQTTFSGPVTSQNGFNSDDTPTTVDYVAGSYNLTDFTVRPASTWTGTVAALVGAANSRT
Ga0315288_115527542	3300031772	Sediment	MAQTTFSGPVTSKAGFNSDDTLTAADYVSGSYSLTDFTVRP
Ga0315288_117020371	3300031772	Sediment	MGQTTFSGPVTSKAGFNSDDTLDSADLASGSYNLADFTVRPAVTYTGTVAALVGA
Ga0315290_116853472	3300031834	Sediment	MGTTTFSGPVVSDSGFSSDDTLSASDLSTGSFNLTDFT
Ga0315285_102115183	3300031885	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLADFTVRPAVTYTGTVAALVGAVN
Ga0315285_103408012	3300031885	Sediment	MGQTTFSGPVTSKAGFNSDDTLNSTDLSTGSYNLADFTVRPAATY
Ga0315285_104036323	3300031885	Sediment	MGQTTFSGPVTSKAGFNSDDTLDSADLASGSYNLADFTVRPAVTYTGTVAALVGAVNQ
Ga0315294_103240913	3300031952	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLADFTVRPAVTYTGTVAALVGAVNQRTAGVSGA
Ga0315294_105826181	3300031952	Sediment	MGQTTFSGPVTSKAGFNSDDTLDSADLASGSYNLADFTVRPAVT
Ga0315294_114799672	3300031952	Sediment	MSTTTFSGPVVSGAGFTSDDTINASNLTSGSYNLADFTVRP
Ga0315284_125119851	3300032053	Sediment	MGQTTFSGPVTSKAGFNSDDTLNATDLASGSYNLADFTVRPAVT
Ga0315905_114844432	3300032092	Freshwater	MAQTTFSGPVTSQNGFNSDDTLTAADYVAGSYNLTDFTVRPAATWTGTVAALV
Ga0315902_103367003	3300032093	Freshwater	MAQTTFSGPVTSNAGFNSDDTLTSADLSSGGFNLTDFTVRPAATYSGTVAAVVGAVNQRT
Ga0315277_111279212	3300032118	Sediment	MAQTTFAGPVTSNAGFNSDDTLTAADYVSGSYNLTDFTVRPAATWTGTVSALVGAANSRT
Ga0315292_110423311	3300032143	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLTDFTVRPA
Ga0315281_111412262	3300032163	Sediment	MAQTTFSGPVTSKAGFNSDDTLTAADYTSGSYNLTDFTVRPAATWTGTVA
Ga0315276_102212424	3300032177	Sediment	MSTTTFTGPVVSGAGFTSDDTLDSADLASGSYNLADFTVRPAATYTGTVAALVGAVNQRT
Ga0315276_121884652	3300032177	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLADFTVRPAV
Ga0315270_101337133	3300032275	Sediment	MATTTFSGPVVSGAGFNSDDTLNSSDLASGSYNLTDFT
Ga0315286_114883112	3300032342	Sediment	MGTTTFSGPVVSNAGFTSDDTLNATDLATGAYNLTDFTVRPAANWSGTVAALVGA
Ga0315275_103442931	3300032401	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLADFTVRPAVTYTGTV
Ga0315273_104177773	3300032516	Sediment	MAQTTFSGPVTSQAGFNSDDTLNATDLASGSYNLADFTVRPAVTYTGTVAAL
Ga0334722_100544061	3300033233	Sediment	MKENIMSTTTFTGPVVSGAGFNSDDTLDSADLASGSYNLADF
Ga0334722_108753992	3300033233	Sediment	MAQTTFSGPVTSKAGFNSDDTLTAADYTSGSYNLTDFTVRPAATWTGTVSALVGAANSRTAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063347

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences