Metagenome / Metatranscriptome Family F063294

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063294
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	44 residues
Representative Sequence	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAK
Number of Associated Samples	66
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.80 %
% of genes near scaffold ends (potentially truncated)	82.95 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.767 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.736 % of family members)
Environment Ontology (ENVO)	Unclassified (86.047 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.713 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01724	DUF29	4.65
PF04392	ABC_sub_bind	4.65
PF13924	Lipocalin_5	3.88
PF00211	Guanylate_cyc	3.10
PF00589	Phage_integrase	3.10
PF08972	DUF1902	3.10
PF07885	Ion_trans_2	2.33
PF00881	Nitroreductase	2.33
PF07040	DUF1326	2.33
PF13560	HTH_31	1.55
PF07927	HicA_toxin	1.55
PF00672	HAMP	1.55
PF05068	MtlR	0.78
PF04055	Radical_SAM	0.78
PF00805	Pentapeptide	0.78
PF14384	BrnA_antitoxin	0.78
PF00239	Resolvase	0.78
PF05221	AdoHcyase	0.78
PF06689	zf-C4_ClpX	0.78
PF01266	DAO	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.65
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.10
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	2.33
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.55
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.78
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG3722	DNA-binding transcriptional regulator, MltR family	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
All Organisms	root	All Organisms	30.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
cellular organisms	root	All Organisms → cellular organisms	30.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.46 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.81 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.93 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.55 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.78 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.78 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.33 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	0.78 %
Sphingomonas populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_14811156	Not Available	633	Open in IMG/M
3300005363\|Ga0008090_15395319	Not Available	546	Open in IMG/M
3300005363\|Ga0008090_15798538	Not Available	799	Open in IMG/M
3300005764\|Ga0066903_108574876	Not Available	521	Open in IMG/M
3300009089\|Ga0099828_11421523	Not Available	612	Open in IMG/M
3300010047\|Ga0126382_10871199	Not Available	776	Open in IMG/M
3300010048\|Ga0126373_11106282	Not Available	858	Open in IMG/M
3300010048\|Ga0126373_11144330	Not Available	844	Open in IMG/M
3300010048\|Ga0126373_13113712	Not Available	517	Open in IMG/M
3300010376\|Ga0126381_101205423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi	1094	Open in IMG/M
3300010376\|Ga0126381_103410052	Not Available	625	Open in IMG/M
3300010376\|Ga0126381_104487575	Not Available	539	Open in IMG/M
3300011271\|Ga0137393_10018687	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	5012	Open in IMG/M
3300012971\|Ga0126369_12093979	Not Available	653	Open in IMG/M
3300016294\|Ga0182041_10980284	Not Available	763	Open in IMG/M
3300016294\|Ga0182041_12095029	Not Available	528	Open in IMG/M
3300016294\|Ga0182041_12095620	Not Available	527	Open in IMG/M
3300016319\|Ga0182033_10232097	Not Available	1488	Open in IMG/M
3300016319\|Ga0182033_11331588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300016319\|Ga0182033_11693352	Not Available	573	Open in IMG/M
3300016341\|Ga0182035_11462744	Not Available	614	Open in IMG/M
3300016357\|Ga0182032_10131731	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300016357\|Ga0182032_10638655	Not Available	889	Open in IMG/M
3300016357\|Ga0182032_10928630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300016357\|Ga0182032_11253161	Not Available	639	Open in IMG/M
3300016371\|Ga0182034_10152492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1738	Open in IMG/M
3300016371\|Ga0182034_11371958	Not Available	617	Open in IMG/M
3300016371\|Ga0182034_11433962	Not Available	604	Open in IMG/M
3300016404\|Ga0182037_10085115	Not Available	2233	Open in IMG/M
3300016404\|Ga0182037_10847335	Not Available	790	Open in IMG/M
3300016422\|Ga0182039_10498036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1052	Open in IMG/M
3300016445\|Ga0182038_10431717	Not Available	1111	Open in IMG/M
3300016445\|Ga0182038_10640647	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300016445\|Ga0182038_11443237	Not Available	617	Open in IMG/M
3300021560\|Ga0126371_11161058	Not Available	910	Open in IMG/M
3300021560\|Ga0126371_11220189	Not Available	888	Open in IMG/M
3300021560\|Ga0126371_12490505	Not Available	626	Open in IMG/M
3300021560\|Ga0126371_12612902	Not Available	612	Open in IMG/M
3300031543\|Ga0318516_10818883	Not Available	525	Open in IMG/M
3300031545\|Ga0318541_10024071	All Organisms → cellular organisms → Bacteria → Proteobacteria	2949	Open in IMG/M
3300031545\|Ga0318541_10067598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1867	Open in IMG/M
3300031546\|Ga0318538_10447226	Not Available	700	Open in IMG/M
3300031573\|Ga0310915_10007452	All Organisms → cellular organisms → Bacteria	6213	Open in IMG/M
3300031668\|Ga0318542_10129856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1239	Open in IMG/M
3300031668\|Ga0318542_10592068	Not Available	578	Open in IMG/M
3300031679\|Ga0318561_10211910	Not Available	1052	Open in IMG/M
3300031679\|Ga0318561_10262017	Not Available	943	Open in IMG/M
3300031679\|Ga0318561_10384416	Not Available	771	Open in IMG/M
3300031679\|Ga0318561_10640975	Not Available	585	Open in IMG/M
3300031680\|Ga0318574_10227674	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300031682\|Ga0318560_10072003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1746	Open in IMG/M
3300031713\|Ga0318496_10790010	Not Available	523	Open in IMG/M
3300031719\|Ga0306917_10780969	Not Available	749	Open in IMG/M
3300031719\|Ga0306917_10798671	Not Available	740	Open in IMG/M
3300031719\|Ga0306917_10886039	Not Available	698	Open in IMG/M
3300031719\|Ga0306917_10983070	Not Available	659	Open in IMG/M
3300031724\|Ga0318500_10005527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4047	Open in IMG/M
3300031724\|Ga0318500_10228371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300031736\|Ga0318501_10433334	Not Available	713	Open in IMG/M
3300031744\|Ga0306918_10020049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4038	Open in IMG/M
3300031744\|Ga0306918_11048788	Not Available	632	Open in IMG/M
3300031744\|Ga0306918_11106276	Not Available	614	Open in IMG/M
3300031747\|Ga0318502_10104525	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300031763\|Ga0318537_10149956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300031764\|Ga0318535_10269650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	762	Open in IMG/M
3300031765\|Ga0318554_10131494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1417	Open in IMG/M
3300031765\|Ga0318554_10716789	Not Available	561	Open in IMG/M
3300031769\|Ga0318526_10356562	Not Available	598	Open in IMG/M
3300031770\|Ga0318521_10350164	Not Available	875	Open in IMG/M
3300031770\|Ga0318521_10390011	Not Available	829	Open in IMG/M
3300031770\|Ga0318521_10481123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300031793\|Ga0318548_10017895	Not Available	2937	Open in IMG/M
3300031797\|Ga0318550_10310147	Not Available	765	Open in IMG/M
3300031799\|Ga0318565_10122148	Not Available	1257	Open in IMG/M
3300031832\|Ga0318499_10012585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2794	Open in IMG/M
3300031833\|Ga0310917_10815059	Not Available	630	Open in IMG/M
3300031879\|Ga0306919_10620573	Not Available	834	Open in IMG/M
3300031879\|Ga0306919_11035927	Not Available	627	Open in IMG/M
3300031879\|Ga0306919_11063616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300031890\|Ga0306925_10007999	All Organisms → cellular organisms → Bacteria	9985	Open in IMG/M
3300031890\|Ga0306925_10074613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3573	Open in IMG/M
3300031890\|Ga0306925_10233707	Not Available	1982	Open in IMG/M
3300031890\|Ga0306925_10554125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1219	Open in IMG/M
3300031890\|Ga0306925_11659429	Not Available	619	Open in IMG/M
3300031890\|Ga0306925_12070770	Not Available	534	Open in IMG/M
3300031893\|Ga0318536_10558867	Not Available	574	Open in IMG/M
3300031894\|Ga0318522_10266739	Not Available	649	Open in IMG/M
3300031894\|Ga0318522_10400537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	520	Open in IMG/M
3300031896\|Ga0318551_10167598	Not Available	1205	Open in IMG/M
3300031896\|Ga0318551_10338681	Not Available	850	Open in IMG/M
3300031896\|Ga0318551_10907306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	514	Open in IMG/M
3300031910\|Ga0306923_10054056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4440	Open in IMG/M
3300031910\|Ga0306923_10496670	Not Available	1380	Open in IMG/M
3300031910\|Ga0306923_11758947	Not Available	638	Open in IMG/M
3300031910\|Ga0306923_12009569	Not Available	586	Open in IMG/M
3300031910\|Ga0306923_12093849	Not Available	571	Open in IMG/M
3300031942\|Ga0310916_10057289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3004	Open in IMG/M
3300031942\|Ga0310916_10383560	Not Available	1195	Open in IMG/M
3300031942\|Ga0310916_11078280	Not Available	668	Open in IMG/M
3300031942\|Ga0310916_11438813	Not Available	563	Open in IMG/M
3300031945\|Ga0310913_10019576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4197	Open in IMG/M
3300031945\|Ga0310913_10972131	Not Available	596	Open in IMG/M
3300031947\|Ga0310909_11619523	Not Available	513	Open in IMG/M
3300031954\|Ga0306926_10089309	All Organisms → cellular organisms → Bacteria → Proteobacteria	3762	Open in IMG/M
3300031954\|Ga0306926_11195069	Not Available	894	Open in IMG/M
3300031954\|Ga0306926_11629141	Not Available	739	Open in IMG/M
3300031954\|Ga0306926_12224697	Not Available	610	Open in IMG/M
3300031981\|Ga0318531_10180188	Not Available	950	Open in IMG/M
3300031981\|Ga0318531_10477078	Not Available	565	Open in IMG/M
3300031981\|Ga0318531_10512412	Not Available	543	Open in IMG/M
3300032001\|Ga0306922_11957035	Not Available	572	Open in IMG/M
3300032035\|Ga0310911_10331316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300032044\|Ga0318558_10024726	All Organisms → cellular organisms → Bacteria → Proteobacteria	2476	Open in IMG/M
3300032055\|Ga0318575_10399594	Not Available	697	Open in IMG/M
3300032059\|Ga0318533_10230716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300032059\|Ga0318533_10350071	Not Available	1076	Open in IMG/M
3300032060\|Ga0318505_10020996	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300032063\|Ga0318504_10422326	Not Available	636	Open in IMG/M
3300032068\|Ga0318553_10400029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	719	Open in IMG/M
3300032076\|Ga0306924_10181768	Not Available	2414	Open in IMG/M
3300032089\|Ga0318525_10479039	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300032094\|Ga0318540_10372427	Not Available	690	Open in IMG/M
3300032261\|Ga0306920_101429111	Not Available	990	Open in IMG/M
3300032261\|Ga0306920_102876040	Not Available	653	Open in IMG/M
3300033289\|Ga0310914_10774036	Not Available	857	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.22%
Loam	Environmental → Terrestrial → Soil → Loam	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	86.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.30%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008090_148111562	3300005363	Tropical Rainforest Soil	VILDLSDEETRALLNLLIDAIENDRYPNSPRIRLSQGILSKFGELGGLSPELAQR
Ga0008090_153953191	3300005363	Tropical Rainforest Soil	MQLDLSDEETRALLNLLIDTIEADRYPLAPRVRVLKEILVKFGEVGGLAP
Ga0008090_157985382	3300005363	Tropical Rainforest Soil	MILDLTDEETRALLNLLIDTIEADRYPMSPRIRLLQAILA*
Ga0066903_1085748763	3300005764	Tropical Forest Soil	MHCDLSDEETRALLNLLIEPIEADRYPNSPRIRLLQAI
Ga0099828_114215232	3300009089	Vadose Zone Soil	MQLDLTDEEAGARLRLLIDAIEADRYPLSPRVRSSAVSG*
Ga0126382_108711992	3300010047	Tropical Forest Soil	MILDLTDEETRALLNLLIDTIEADRYPMSPRIRLLQAILGKCDEIGGLSP
Ga0126373_111062821	3300010048	Tropical Forest Soil	MHLDLADEETFALLNLLTETIENDRYALSPRIQTLRGILAKFG
Ga0126373_111443301	3300010048	Tropical Forest Soil	LLTDDETLALLNLLIEAIDADRYPYSPSIRRLQVES
Ga0126373_131137123	3300010048	Tropical Forest Soil	MHFDLSDEETRALLNLLIEPIEADRYPNSPRIRLL
Ga0126381_1012054233	3300010376	Tropical Forest Soil	MILDLSDEETRALLNLLTETIEGDRYPVSPCPRV*
Ga0126381_1034100523	3300010376	Tropical Forest Soil	MLLDLSDEETRALLNLLIETIEADRYPLSPRVRALKDILVKLGGGPGSGAGA*
Ga0126381_1044875752	3300010376	Tropical Forest Soil	MSLDLTDEETFALLNLLIDAIEADRYPMSPRIRLLREFLTRCGGVGGLPPELAARL
Ga0137393_100186873	3300011271	Vadose Zone Soil	MQLDLTDEEAGARLRLLIDAIEADRYPLSPRVRSSAISG*
Ga0126369_120939792	3300012971	Tropical Forest Soil	MKLDLTDEETFALLNLLIDAIEGDRYPMSPRIRLLREILVFMAAYSG*
Ga0182041_103277412	3300016294	Soil	MILDLTDEETLALLNLLIDTIEADRYRMSQRIRRLQAILGKFGSVGVG
Ga0182041_109802841	3300016294	Soil	MRLDLTDEETFALLNLLVDTIEGDRYPMSPRIRLLREILAKCGEVGG
Ga0182041_120950291	3300016294	Soil	MTLDLTDEETFALLNLLIDAIEADRYPMSPRIRLLREIL
Ga0182041_120956202	3300016294	Soil	MQLELTDEETFALLNFLVDTIEADRYPMSPRIRLLRAILDKFGEMG
Ga0182033_102320971	3300016319	Soil	VTLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILGKFGQ
Ga0182033_102450733	3300016319	Soil	MILDLGDDEARALLNLLVDAVEGDRYPMSPRVRVLKTS
Ga0182033_113315881	3300016319	Soil	VQLDLDEDEARALLNLLIVAIEADRYPMSRRIRVLKDILMKF
Ga0182033_116933521	3300016319	Soil	MWLDLTNEETFVLLNLLIDAIEADRYPMSPRIRLLREILAKCGEVGGLP
Ga0182035_114627441	3300016341	Soil	MILDLSDEETRALLNLLVEAIENDRYPMSPRIRLFREILSKF
Ga0182032_101317311	3300016357	Soil	MQLDLDDEETRALLNLLIEAIEGDRYPLSPRVRVLNEI
Ga0182032_106386551	3300016357	Soil	MRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAIVRKFGE
Ga0182032_109286303	3300016357	Soil	MQLELTDEEARALLNLLIDTIEADRYPMSPRIRLLRAILDKFGEMGPLPPDLAQ
Ga0182032_112531611	3300016357	Soil	MQLELTDEGTRALLNLLIDVIEADRYPNSPRIRLLQAILAKCGDV
Ga0182034_101524925	3300016371	Soil	MILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLRQILGQCGEVGGL
Ga0182034_113719582	3300016371	Soil	MRIDLTDEETFALLNLLVDTIEADRYPMSPRIRLL
Ga0182034_114339623	3300016371	Soil	MAMILDLSDEEARGLLNLLIDTIEADRYPMSPRIRLLQAILAKCGEVG
Ga0182037_100851155	3300016404	Soil	MQLDLTDQETFALLNLLVDTIEADRYPMSPRIRLL
Ga0182037_108473353	3300016404	Soil	MHLDLIDDEARALLNVLIEVIVNDRYPMSPRIRAL
Ga0182039_104980363	3300016422	Soil	MHLDLIDDEARALLNVLIEVIENSRYPMSPSIRVLQAILS
Ga0182038_104317173	3300016445	Soil	MRIDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAILAK
Ga0182038_106406472	3300016445	Soil	MQLELTAEETLALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0182038_114432371	3300016445	Soil	DLTDEETFALLNLLVDTIEADRYPMSPRVGLLREM
Ga0126371_111610582	3300021560	Tropical Forest Soil	MHLDLTDEETLALLNLLIETIEANRYPMSPRIRLLQAILA
Ga0126371_112201894	3300021560	Tropical Forest Soil	MLLDLSDEETRALLNLLIETIEADRYPLSPRVRALKDILVKLGGGPGSGAGA
Ga0126371_124905052	3300021560	Tropical Forest Soil	VNIDLDDDETRALLNMLIEVIEADKYPLSPRIRLLRQVLAKFGEIGGLPPELRGRRGFARACLS
Ga0126371_126129021	3300021560	Tropical Forest Soil	MHCDLSDEETRALLNLLIEPIEADRYPMSPRIRVLRDILVPRRTAR
Ga0318516_108188832	3300031543	Soil	MILDLTDEETLALLNLLIDTIEADRYPMSPRIRRLQAILGKFGSVGVG
Ga0318541_100240712	3300031545	Soil	MQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0318541_100675982	3300031545	Soil	MHLDLTDAETLALLNVLIETIEADRYPLSPRNRLLQANQV
Ga0318538_104472263	3300031546	Soil	MQLDLTDEETFALLNLLVDTIENDRYPSSPRIRLLRQILAKFGEIGAV
Ga0310915_100074527	3300031573	Soil	VMHLDLTDAETLALLNVLIETIEADRYPLSPRNRLLQANQV
Ga0318542_101298561	3300031668	Soil	VTLDLTDEETFALLNLLVDTIEADRYPLSPRIRLLREIL
Ga0318542_105920683	3300031668	Soil	MAMILDLSDEEARALLNVLIDTIEADRYPMSPRIRRLQEILA
Ga0318561_102119101	3300031679	Soil	MQLGLTDEETFALLNLLIDTIEADRYPMSPRIRLLREILGKFGEMGGLPPE
Ga0318561_102620171	3300031679	Soil	MAMILDLSDEEARALLNVLIDTIEADRYPMSPRIRRLHEI
Ga0318561_103844161	3300031679	Soil	MHLDLTDDEARALLNVLIEVIENDRDPMSPRIRAL
Ga0318561_106409751	3300031679	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLL
Ga0318574_102276741	3300031680	Soil	MILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILTKCGEVGGLPPELAT
Ga0318560_100720035	3300031682	Soil	MILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLRQILGQCGEVG
Ga0318496_107900101	3300031713	Soil	MRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGL
Ga0306917_107809693	3300031719	Soil	MILDLSDEETRALLNLLIEAIEADRYPMSPRIRLLQAI
Ga0306917_107986711	3300031719	Soil	VTLDLTDEETLALLNLLVDTIDADRYPMSPRIRLLRAIL
Ga0306917_108860391	3300031719	Soil	MQLDLTDEETFALLNLLVDTIEADRNPMSPRIRLLREILNKFGEI
Ga0306917_109830701	3300031719	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEIGPVSPELEQKLR
Ga0318500_100055271	3300031724	Soil	MNLDLDDDEARALLNLLIDVIEADRYPNSPRIRLLRE
Ga0318500_102283711	3300031724	Soil	IGVMHLDLTDAETLALLNVLIETIEADRYPLSPRNRLLQANQV
Ga0318501_104333341	3300031736	Soil	MQLGLTDEETFALLNLLIDTIEADRYPMSPRIRLLREILGK
Ga0306918_1002004910	3300031744	Soil	VWAMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0306918_110487882	3300031744	Soil	VTLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAILAKCGEVGGLPPEL
Ga0306918_111062761	3300031744	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLR
Ga0318502_101045251	3300031747	Soil	MILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILGKCGE
Ga0318537_101499562	3300031763	Soil	RGFSLPVWAMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0318535_102696501	3300031764	Soil	MQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPA
Ga0318554_101314943	3300031765	Soil	MAMILDLSDEEARALLNVLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0318554_107167891	3300031765	Soil	MQLELTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKCGEVGG
Ga0318526_103565622	3300031769	Soil	MHLDLSDDEARAHLNLLTDAIEGDRYPLSPRVRVLREIPAK
Ga0318521_103501642	3300031770	Soil	MQLDLTDEETFALLNLLVDTIVADRYPMSPRIRLLRKILAKCGDIG
Ga0318521_103900113	3300031770	Soil	MQLGLTDEETFALLNLLIDTIEADRYPMSPRIRLLREILGKFGEMGGLPPELAQKLR
Ga0318521_104811233	3300031770	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAK
Ga0318548_1001789510	3300031793	Soil	MHLDLTDEETRTLLNLLVKTIEADRYPMSPRIRLLQAILAKCGEVGGLAP
Ga0318550_103101474	3300031797	Soil	MAMILDLSDEQTRALLNVLIDTIEADHYPNSPRIRR
Ga0318565_101221483	3300031799	Soil	MILDLSDEETRALLNLLVEAIENDRYPMSPRIRLFREILSKFGELGGLSPE
Ga0318499_100125855	3300031832	Soil	MILDLTDEETLALLNVLIDVIEADRYPMSPRIRALQAILG
Ga0310917_108150591	3300031833	Soil	LHRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGLSKRPR
Ga0306919_102832101	3300031879	Soil	MQLDLDDEETLALLNLLVDTIEADRYPMSPRIRLLREILAKLGEV
Ga0306919_106205732	3300031879	Soil	VTLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLR
Ga0306919_110359272	3300031879	Soil	MRIDLTDEETFALLNLLVDTIEADRYPMSPRIRLLQKILF
Ga0306919_110636163	3300031879	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILA
Ga0306925_1000799913	3300031890	Soil	MILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILGK
Ga0306925_100746136	3300031890	Soil	MRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEIGPVSPELA
Ga0306925_102337071	3300031890	Soil	MKLELTDEETFWLLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGLSNDLPQKLRRS
Ga0306925_105541253	3300031890	Soil	MHLDLTDDEARALLNVLIEVIENDRDPMSPRIRALQAILAKCGGVGG
Ga0306925_116594292	3300031890	Soil	MQLDLTDEETAALLNLLVDTIEADRYPMSPRIRLLREILVKFGEIKPVS
Ga0306925_120707701	3300031890	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKCGEVGGLPPELAAR
Ga0318536_105588673	3300031893	Soil	MILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLRQILGQCG
Ga0318522_102667392	3300031894	Soil	MHLDLTDAETLALLNLLIDTIEADHYPMSPRIRLLQAVLAK
Ga0318522_104005371	3300031894	Soil	MQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKF
Ga0318551_101675981	3300031896	Soil	MNLDLDDDEARALLNLLIDVIEADRYPNSPRIRLLREILGKRGEVG
Ga0318551_103386811	3300031896	Soil	MQLDLSDEETRALLNLLIDAIEGDRYPLSPLIRTLKEILVKCGEIGGL
Ga0318551_109073061	3300031896	Soil	VQLDVDANEARALLNLLMDAIEADRYPMSPRIRVLKD
Ga0306923_100540561	3300031910	Soil	MILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILGKCGEVGG
Ga0306923_104966701	3300031910	Soil	MKLELTDEETFWLLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGLSN
Ga0306923_117589471	3300031910	Soil	MLLDLSDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFAEI
Ga0306923_120095691	3300031910	Soil	MRLDLTDEETFALLNLLVDTIEGDRYPMSPRIRLLREILAKCGEVGGLSNDLEQKLRR
Ga0306923_120938491	3300031910	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRKILAKCGEVGGLPA
Ga0310916_100572896	3300031942	Soil	MRLELTDEETFALLNLLVDTIEGDRYSMSPRIRFLREILAKCGEVGG
Ga0310916_103835601	3300031942	Soil	MAMILDLSDEEARALLNVLIDTIEADRYPMSPRIR
Ga0310916_110782801	3300031942	Soil	LAVLCMRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEIGQASPE
Ga0310916_114388131	3300031942	Soil	MQLDLTDQETFALLNLLVDTIEADRYPMSPRIRLLR
Ga0310913_100195767	3300031945	Soil	MHLDLTDADTLALLNLLVETIEADRYPMSPLFRRLQ
Ga0310913_109721311	3300031945	Soil	MQLDLTDEETFALLNLLVDTIENDRYPSSPRIRLLRQILAKFGEIG
Ga0310910_105488991	3300031946	Soil	MHLDLTDEETLALLNLLIETIEADRYPRSPRIRLLREILGKCGEVGELSPELAARVR
Ga0310909_116195232	3300031947	Soil	MQLDLTDEETSALLNLLVDTIEADRYPMSPRIRLLREILVKFGEIKPVSP
Ga0306926_100893096	3300031954	Soil	MHLDLIDDEARALLNVLIEVIENDRYPMSPRIRAL
Ga0306926_111950693	3300031954	Soil	MQLELTDEETRALLNLLIDVIEADRYPNSPRIRLL
Ga0306926_116291411	3300031954	Soil	MKLELTDEETFWLLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVG
Ga0306926_122246972	3300031954	Soil	MILYLTNEEMRALLDLLTDAIEADRYPMSPRIRMLKDILMKFGEMGG
Ga0318531_101801883	3300031981	Soil	MILDLSDEETRALLNLLVEAIENDRYPMSPRIRLFREILSKFGELGGLSPELAAR
Ga0318531_104770782	3300031981	Soil	MRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEVGGLPP
Ga0318531_105124121	3300031981	Soil	MHLDLTDDEARALLNVLIEVIENDRDPMSPRIRALQAILA
Ga0306922_119570351	3300032001	Soil	MNLDLSDEETRALLNLLIDTIEADHYPNSPRIRLLREILA
Ga0310911_103313162	3300032035	Soil	MTLDLTDEETLALLNLLIDTIEADRYPTSPRIRVLREIL
Ga0318558_100247265	3300032044	Soil	MILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLR
Ga0318575_103995941	3300032055	Soil	MNLDLDDDEARALLNLLIDVIEADRYPNSPRIRLLREILG
Ga0318533_102307161	3300032059	Soil	MRLDLTDEETFALLNLMVDTIEGDRYPMSPRIRLLREILAKCGEVGGLSNDLEQKLRR
Ga0318533_103500711	3300032059	Soil	MILDLSDEQTRTLLNLLIETIEADRYPRSPRIRLLREILGKCGEVGEL
Ga0318505_100209966	3300032060	Soil	MILDLSDEQAQARLNLLIDTIEADRYPMSPRIRLLQAILGKCGEVGGLPPELGT
Ga0318504_104223262	3300032063	Soil	MQLELTDEETCALLNLLVDTIEADRHPMSPRIRLLREILGKFGEIGPVLP
Ga0318553_104000292	3300032068	Soil	MQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGL
Ga0306924_101817685	3300032076	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILCK
Ga0318525_104790391	3300032089	Soil	MILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQ
Ga0318540_103724271	3300032094	Soil	VQLDVDANEARALLNLLMDAIEADRYPMSPRIRVLRDILAKCGDVG
Ga0306920_1014291112	3300032261	Soil	MILDLSDEETRALLNLLIDVIEADRFPMSPRVRLLRAIVRKFCEIGPVSPELAQKL
Ga0306920_1028760402	3300032261	Soil	MHLDLTDEETRALLNHLVETIEADRYPMSPRIRALRAILVKFGGVGGLSPEMAAWL
Ga0310914_107740361	3300033289	Soil	MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKCGEVGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063294

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences