NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F063294

Metagenome / Metatranscriptome Family F063294

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063294
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 44 residues
Representative Sequence MQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAK
Number of Associated Samples 66
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 48.80 %
% of genes near scaffold ends (potentially truncated) 82.95 %
% of genes from short scaffolds (< 2000 bps) 83.72 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (69.767 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(45.736 % of family members)
Environment Ontology (ENVO) Unclassified
(86.047 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.713 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.58%    β-sheet: 0.00%    Coil/Unstructured: 59.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF01724DUF29 4.65
PF04392ABC_sub_bind 4.65
PF13924Lipocalin_5 3.88
PF00211Guanylate_cyc 3.10
PF00589Phage_integrase 3.10
PF08972DUF1902 3.10
PF07885Ion_trans_2 2.33
PF00881Nitroreductase 2.33
PF07040DUF1326 2.33
PF13560HTH_31 1.55
PF07927HicA_toxin 1.55
PF00672HAMP 1.55
PF05068MtlR 0.78
PF04055Radical_SAM 0.78
PF00805Pentapeptide 0.78
PF14384BrnA_antitoxin 0.78
PF00239Resolvase 0.78
PF05221AdoHcyase 0.78
PF06689zf-C4_ClpX 0.78
PF01266DAO 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 4.65
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 3.10
COG5588Uncharacterized conserved protein, DUF1326 domainFunction unknown [S] 2.33
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 1.55
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 0.78
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.78
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.78
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.78
COG3722DNA-binding transcriptional regulator, MltR familyTranscription [K] 0.78


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.77 %
All OrganismsrootAll Organisms30.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005363|Ga0008090_14811156Not Available633Open in IMG/M
3300005363|Ga0008090_15395319Not Available546Open in IMG/M
3300005363|Ga0008090_15798538Not Available799Open in IMG/M
3300005764|Ga0066903_108574876Not Available521Open in IMG/M
3300009089|Ga0099828_11421523Not Available612Open in IMG/M
3300010047|Ga0126382_10871199Not Available776Open in IMG/M
3300010048|Ga0126373_11106282Not Available858Open in IMG/M
3300010048|Ga0126373_11144330Not Available844Open in IMG/M
3300010048|Ga0126373_13113712Not Available517Open in IMG/M
3300010376|Ga0126381_101205423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas populi1094Open in IMG/M
3300010376|Ga0126381_103410052Not Available625Open in IMG/M
3300010376|Ga0126381_104487575Not Available539Open in IMG/M
3300011271|Ga0137393_10018687All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus5012Open in IMG/M
3300012971|Ga0126369_12093979Not Available653Open in IMG/M
3300016294|Ga0182041_10980284Not Available763Open in IMG/M
3300016294|Ga0182041_12095029Not Available528Open in IMG/M
3300016294|Ga0182041_12095620Not Available527Open in IMG/M
3300016319|Ga0182033_10232097Not Available1488Open in IMG/M
3300016319|Ga0182033_11331588All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria646Open in IMG/M
3300016319|Ga0182033_11693352Not Available573Open in IMG/M
3300016341|Ga0182035_11462744Not Available614Open in IMG/M
3300016357|Ga0182032_10131731All Organisms → cellular organisms → Bacteria → Proteobacteria1822Open in IMG/M
3300016357|Ga0182032_10638655Not Available889Open in IMG/M
3300016357|Ga0182032_10928630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria741Open in IMG/M
3300016357|Ga0182032_11253161Not Available639Open in IMG/M
3300016371|Ga0182034_10152492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1738Open in IMG/M
3300016371|Ga0182034_11371958Not Available617Open in IMG/M
3300016371|Ga0182034_11433962Not Available604Open in IMG/M
3300016404|Ga0182037_10085115Not Available2233Open in IMG/M
3300016404|Ga0182037_10847335Not Available790Open in IMG/M
3300016422|Ga0182039_10498036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1052Open in IMG/M
3300016445|Ga0182038_10431717Not Available1111Open in IMG/M
3300016445|Ga0182038_10640647All Organisms → cellular organisms → Bacteria → Proteobacteria921Open in IMG/M
3300016445|Ga0182038_11443237Not Available617Open in IMG/M
3300021560|Ga0126371_11161058Not Available910Open in IMG/M
3300021560|Ga0126371_11220189Not Available888Open in IMG/M
3300021560|Ga0126371_12490505Not Available626Open in IMG/M
3300021560|Ga0126371_12612902Not Available612Open in IMG/M
3300031543|Ga0318516_10818883Not Available525Open in IMG/M
3300031545|Ga0318541_10024071All Organisms → cellular organisms → Bacteria → Proteobacteria2949Open in IMG/M
3300031545|Ga0318541_10067598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1867Open in IMG/M
3300031546|Ga0318538_10447226Not Available700Open in IMG/M
3300031573|Ga0310915_10007452All Organisms → cellular organisms → Bacteria6213Open in IMG/M
3300031668|Ga0318542_10129856All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1239Open in IMG/M
3300031668|Ga0318542_10592068Not Available578Open in IMG/M
3300031679|Ga0318561_10211910Not Available1052Open in IMG/M
3300031679|Ga0318561_10262017Not Available943Open in IMG/M
3300031679|Ga0318561_10384416Not Available771Open in IMG/M
3300031679|Ga0318561_10640975Not Available585Open in IMG/M
3300031680|Ga0318574_10227674All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300031682|Ga0318560_10072003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1746Open in IMG/M
3300031713|Ga0318496_10790010Not Available523Open in IMG/M
3300031719|Ga0306917_10780969Not Available749Open in IMG/M
3300031719|Ga0306917_10798671Not Available740Open in IMG/M
3300031719|Ga0306917_10886039Not Available698Open in IMG/M
3300031719|Ga0306917_10983070Not Available659Open in IMG/M
3300031724|Ga0318500_10005527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4047Open in IMG/M
3300031724|Ga0318500_10228371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium898Open in IMG/M
3300031736|Ga0318501_10433334Not Available713Open in IMG/M
3300031744|Ga0306918_10020049All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4038Open in IMG/M
3300031744|Ga0306918_11048788Not Available632Open in IMG/M
3300031744|Ga0306918_11106276Not Available614Open in IMG/M
3300031747|Ga0318502_10104525All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300031763|Ga0318537_10149956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria868Open in IMG/M
3300031764|Ga0318535_10269650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii762Open in IMG/M
3300031765|Ga0318554_10131494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1417Open in IMG/M
3300031765|Ga0318554_10716789Not Available561Open in IMG/M
3300031769|Ga0318526_10356562Not Available598Open in IMG/M
3300031770|Ga0318521_10350164Not Available875Open in IMG/M
3300031770|Ga0318521_10390011Not Available829Open in IMG/M
3300031770|Ga0318521_10481123All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria745Open in IMG/M
3300031793|Ga0318548_10017895Not Available2937Open in IMG/M
3300031797|Ga0318550_10310147Not Available765Open in IMG/M
3300031799|Ga0318565_10122148Not Available1257Open in IMG/M
3300031832|Ga0318499_10012585All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2794Open in IMG/M
3300031833|Ga0310917_10815059Not Available630Open in IMG/M
3300031879|Ga0306919_10620573Not Available834Open in IMG/M
3300031879|Ga0306919_11035927Not Available627Open in IMG/M
3300031879|Ga0306919_11063616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria618Open in IMG/M
3300031890|Ga0306925_10007999All Organisms → cellular organisms → Bacteria9985Open in IMG/M
3300031890|Ga0306925_10074613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3573Open in IMG/M
3300031890|Ga0306925_10233707Not Available1982Open in IMG/M
3300031890|Ga0306925_10554125All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1219Open in IMG/M
3300031890|Ga0306925_11659429Not Available619Open in IMG/M
3300031890|Ga0306925_12070770Not Available534Open in IMG/M
3300031893|Ga0318536_10558867Not Available574Open in IMG/M
3300031894|Ga0318522_10266739Not Available649Open in IMG/M
3300031894|Ga0318522_10400537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii520Open in IMG/M
3300031896|Ga0318551_10167598Not Available1205Open in IMG/M
3300031896|Ga0318551_10338681Not Available850Open in IMG/M
3300031896|Ga0318551_10907306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae514Open in IMG/M
3300031910|Ga0306923_10054056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4440Open in IMG/M
3300031910|Ga0306923_10496670Not Available1380Open in IMG/M
3300031910|Ga0306923_11758947Not Available638Open in IMG/M
3300031910|Ga0306923_12009569Not Available586Open in IMG/M
3300031910|Ga0306923_12093849Not Available571Open in IMG/M
3300031942|Ga0310916_10057289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3004Open in IMG/M
3300031942|Ga0310916_10383560Not Available1195Open in IMG/M
3300031942|Ga0310916_11078280Not Available668Open in IMG/M
3300031942|Ga0310916_11438813Not Available563Open in IMG/M
3300031945|Ga0310913_10019576All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4197Open in IMG/M
3300031945|Ga0310913_10972131Not Available596Open in IMG/M
3300031947|Ga0310909_11619523Not Available513Open in IMG/M
3300031954|Ga0306926_10089309All Organisms → cellular organisms → Bacteria → Proteobacteria3762Open in IMG/M
3300031954|Ga0306926_11195069Not Available894Open in IMG/M
3300031954|Ga0306926_11629141Not Available739Open in IMG/M
3300031954|Ga0306926_12224697Not Available610Open in IMG/M
3300031981|Ga0318531_10180188Not Available950Open in IMG/M
3300031981|Ga0318531_10477078Not Available565Open in IMG/M
3300031981|Ga0318531_10512412Not Available543Open in IMG/M
3300032001|Ga0306922_11957035Not Available572Open in IMG/M
3300032035|Ga0310911_10331316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium878Open in IMG/M
3300032044|Ga0318558_10024726All Organisms → cellular organisms → Bacteria → Proteobacteria2476Open in IMG/M
3300032055|Ga0318575_10399594Not Available697Open in IMG/M
3300032059|Ga0318533_10230716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1333Open in IMG/M
3300032059|Ga0318533_10350071Not Available1076Open in IMG/M
3300032060|Ga0318505_10020996All Organisms → cellular organisms → Bacteria2547Open in IMG/M
3300032063|Ga0318504_10422326Not Available636Open in IMG/M
3300032068|Ga0318553_10400029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii719Open in IMG/M
3300032076|Ga0306924_10181768Not Available2414Open in IMG/M
3300032089|Ga0318525_10479039All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300032094|Ga0318540_10372427Not Available690Open in IMG/M
3300032261|Ga0306920_101429111Not Available990Open in IMG/M
3300032261|Ga0306920_102876040Not Available653Open in IMG/M
3300033289|Ga0310914_10774036Not Available857Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil45.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil40.31%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.30%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil2.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0008090_1481115623300005363Tropical Rainforest SoilVILDLSDEETRALLNLLIDAIENDRYPNSPRIRLSQGILSKFGELGGLSPELAQR
Ga0008090_1539531913300005363Tropical Rainforest SoilMQLDLSDEETRALLNLLIDTIEADRYPLAPRVRVLKEILVKFGEVGGLAP
Ga0008090_1579853823300005363Tropical Rainforest SoilMILDLTDEETRALLNLLIDTIEADRYPMSPRIRLLQAILA*
Ga0066903_10857487633300005764Tropical Forest SoilMHCDLSDEETRALLNLLIEPIEADRYPNSPRIRLLQAI
Ga0099828_1142152323300009089Vadose Zone SoilMQLDLTDEEAGARLRLLIDAIEADRYPLSPRVRSSAVSG*
Ga0126382_1087119923300010047Tropical Forest SoilMILDLTDEETRALLNLLIDTIEADRYPMSPRIRLLQAILGKCDEIGGLSP
Ga0126373_1110628213300010048Tropical Forest SoilMHLDLADEETFALLNLLTETIENDRYALSPRIQTLRGILAKFG
Ga0126373_1114433013300010048Tropical Forest SoilLLTDDETLALLNLLIEAIDADRYPYSPSIRRLQVES
Ga0126373_1311371233300010048Tropical Forest SoilMHFDLSDEETRALLNLLIEPIEADRYPNSPRIRLL
Ga0126381_10120542333300010376Tropical Forest SoilMILDLSDEETRALLNLLTETIEGDRYPVSPCPRV*
Ga0126381_10341005233300010376Tropical Forest SoilMLLDLSDEETRALLNLLIETIEADRYPLSPRVRALKDILVKLGGGPGSGAGA*
Ga0126381_10448757523300010376Tropical Forest SoilMSLDLTDEETFALLNLLIDAIEADRYPMSPRIRLLREFLTRCGGVGGLPPELAARL
Ga0137393_1001868733300011271Vadose Zone SoilMQLDLTDEEAGARLRLLIDAIEADRYPLSPRVRSSAISG*
Ga0126369_1209397923300012971Tropical Forest SoilMKLDLTDEETFALLNLLIDAIEGDRYPMSPRIRLLREILVFMAAYSG*
Ga0182041_1032774123300016294SoilMILDLTDEETLALLNLLIDTIEADRYRMSQRIRRLQAILGKFGSVGVG
Ga0182041_1098028413300016294SoilMRLDLTDEETFALLNLLVDTIEGDRYPMSPRIRLLREILAKCGEVGG
Ga0182041_1209502913300016294SoilMTLDLTDEETFALLNLLIDAIEADRYPMSPRIRLLREIL
Ga0182041_1209562023300016294SoilMQLELTDEETFALLNFLVDTIEADRYPMSPRIRLLRAILDKFGEMG
Ga0182033_1023209713300016319SoilVTLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILGKFGQ
Ga0182033_1024507333300016319SoilMILDLGDDEARALLNLLVDAVEGDRYPMSPRVRVLKTS
Ga0182033_1133158813300016319SoilVQLDLDEDEARALLNLLIVAIEADRYPMSRRIRVLKDILMKF
Ga0182033_1169335213300016319SoilMWLDLTNEETFVLLNLLIDAIEADRYPMSPRIRLLREILAKCGEVGGLP
Ga0182035_1146274413300016341SoilMILDLSDEETRALLNLLVEAIENDRYPMSPRIRLFREILSKF
Ga0182032_1013173113300016357SoilMQLDLDDEETRALLNLLIEAIEGDRYPLSPRVRVLNEI
Ga0182032_1063865513300016357SoilMRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAIVRKFGE
Ga0182032_1092863033300016357SoilMQLELTDEEARALLNLLIDTIEADRYPMSPRIRLLRAILDKFGEMGPLPPDLAQ
Ga0182032_1125316113300016357SoilMQLELTDEGTRALLNLLIDVIEADRYPNSPRIRLLQAILAKCGDV
Ga0182034_1015249253300016371SoilMILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLRQILGQCGEVGGL
Ga0182034_1137195823300016371SoilMRIDLTDEETFALLNLLVDTIEADRYPMSPRIRLL
Ga0182034_1143396233300016371SoilMAMILDLSDEEARGLLNLLIDTIEADRYPMSPRIRLLQAILAKCGEVG
Ga0182037_1008511553300016404SoilMQLDLTDQETFALLNLLVDTIEADRYPMSPRIRLL
Ga0182037_1084733533300016404SoilMHLDLIDDEARALLNVLIEVIVNDRYPMSPRIRAL
Ga0182039_1049803633300016422SoilMHLDLIDDEARALLNVLIEVIENSRYPMSPSIRVLQAILS
Ga0182038_1043171733300016445SoilMRIDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAILAK
Ga0182038_1064064723300016445SoilMQLELTAEETLALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0182038_1144323713300016445SoilDLTDEETFALLNLLVDTIEADRYPMSPRVGLLREM
Ga0126371_1116105823300021560Tropical Forest SoilMHLDLTDEETLALLNLLIETIEANRYPMSPRIRLLQAILA
Ga0126371_1122018943300021560Tropical Forest SoilMLLDLSDEETRALLNLLIETIEADRYPLSPRVRALKDILVKLGGGPGSGAGA
Ga0126371_1249050523300021560Tropical Forest SoilVNIDLDDDETRALLNMLIEVIEADKYPLSPRIRLLRQVLAKFGEIGGLPPELRGRRGFARACLS
Ga0126371_1261290213300021560Tropical Forest SoilMHCDLSDEETRALLNLLIEPIEADRYPMSPRIRVLRDILVPRRTAR
Ga0318516_1081888323300031543SoilMILDLTDEETLALLNLLIDTIEADRYPMSPRIRRLQAILGKFGSVGVG
Ga0318541_1002407123300031545SoilMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0318541_1006759823300031545SoilMHLDLTDAETLALLNVLIETIEADRYPLSPRNRLLQANQV
Ga0318538_1044722633300031546SoilMQLDLTDEETFALLNLLVDTIENDRYPSSPRIRLLRQILAKFGEIGAV
Ga0310915_1000745273300031573SoilVMHLDLTDAETLALLNVLIETIEADRYPLSPRNRLLQANQV
Ga0318542_1012985613300031668SoilVTLDLTDEETFALLNLLVDTIEADRYPLSPRIRLLREIL
Ga0318542_1059206833300031668SoilMAMILDLSDEEARALLNVLIDTIEADRYPMSPRIRRLQEILA
Ga0318561_1021191013300031679SoilMQLGLTDEETFALLNLLIDTIEADRYPMSPRIRLLREILGKFGEMGGLPPE
Ga0318561_1026201713300031679SoilMAMILDLSDEEARALLNVLIDTIEADRYPMSPRIRRLHEI
Ga0318561_1038441613300031679SoilMHLDLTDDEARALLNVLIEVIENDRDPMSPRIRAL
Ga0318561_1064097513300031679SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLL
Ga0318574_1022767413300031680SoilMILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILTKCGEVGGLPPELAT
Ga0318560_1007200353300031682SoilMILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLRQILGQCGEVG
Ga0318496_1079001013300031713SoilMRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGL
Ga0306917_1078096933300031719SoilMILDLSDEETRALLNLLIEAIEADRYPMSPRIRLLQAI
Ga0306917_1079867113300031719SoilVTLDLTDEETLALLNLLVDTIDADRYPMSPRIRLLRAIL
Ga0306917_1088603913300031719SoilMQLDLTDEETFALLNLLVDTIEADRNPMSPRIRLLREILNKFGEI
Ga0306917_1098307013300031719SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEIGPVSPELEQKLR
Ga0318500_1000552713300031724SoilMNLDLDDDEARALLNLLIDVIEADRYPNSPRIRLLRE
Ga0318500_1022837113300031724SoilIGVMHLDLTDAETLALLNVLIETIEADRYPLSPRNRLLQANQV
Ga0318501_1043333413300031736SoilMQLGLTDEETFALLNLLIDTIEADRYPMSPRIRLLREILGK
Ga0306918_10020049103300031744SoilVWAMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0306918_1104878823300031744SoilVTLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAILAKCGEVGGLPPEL
Ga0306918_1110627613300031744SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLR
Ga0318502_1010452513300031747SoilMILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILGKCGE
Ga0318537_1014995623300031763SoilRGFSLPVWAMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0318535_1026965013300031764SoilMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPA
Ga0318554_1013149433300031765SoilMAMILDLSDEEARALLNVLIEVIENDRYPMSPRIRLLRDIPAKFGLVG
Ga0318554_1071678913300031765SoilMQLELTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKCGEVGG
Ga0318526_1035656223300031769SoilMHLDLSDDEARAHLNLLTDAIEGDRYPLSPRVRVLREIPAK
Ga0318521_1035016423300031770SoilMQLDLTDEETFALLNLLVDTIVADRYPMSPRIRLLRKILAKCGDIG
Ga0318521_1039001133300031770SoilMQLGLTDEETFALLNLLIDTIEADRYPMSPRIRLLREILGKFGEMGGLPPELAQKLR
Ga0318521_1048112333300031770SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAK
Ga0318548_10017895103300031793SoilMHLDLTDEETRTLLNLLVKTIEADRYPMSPRIRLLQAILAKCGEVGGLAP
Ga0318550_1031014743300031797SoilMAMILDLSDEQTRALLNVLIDTIEADHYPNSPRIRR
Ga0318565_1012214833300031799SoilMILDLSDEETRALLNLLVEAIENDRYPMSPRIRLFREILSKFGELGGLSPE
Ga0318499_1001258553300031832SoilMILDLTDEETLALLNVLIDVIEADRYPMSPRIRALQAILG
Ga0310917_1081505913300031833SoilLHRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGLSKRPR
Ga0306919_1028321013300031879SoilMQLDLDDEETLALLNLLVDTIEADRYPMSPRIRLLREILAKLGEV
Ga0306919_1062057323300031879SoilVTLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLR
Ga0306919_1103592723300031879SoilMRIDLTDEETFALLNLLVDTIEADRYPMSPRIRLLQKILF
Ga0306919_1106361633300031879SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILA
Ga0306925_10007999133300031890SoilMILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILGK
Ga0306925_1007461363300031890SoilMRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEIGPVSPELA
Ga0306925_1023370713300031890SoilMKLELTDEETFWLLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGLSNDLPQKLRRS
Ga0306925_1055412533300031890SoilMHLDLTDDEARALLNVLIEVIENDRDPMSPRIRALQAILAKCGGVGG
Ga0306925_1165942923300031890SoilMQLDLTDEETAALLNLLVDTIEADRYPMSPRIRLLREILVKFGEIKPVS
Ga0306925_1207077013300031890SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKCGEVGGLPPELAAR
Ga0318536_1055886733300031893SoilMILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLRQILGQCG
Ga0318522_1026673923300031894SoilMHLDLTDAETLALLNLLIDTIEADHYPMSPRIRLLQAVLAK
Ga0318522_1040053713300031894SoilMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKF
Ga0318551_1016759813300031896SoilMNLDLDDDEARALLNLLIDVIEADRYPNSPRIRLLREILGKRGEVG
Ga0318551_1033868113300031896SoilMQLDLSDEETRALLNLLIDAIEGDRYPLSPLIRTLKEILVKCGEIGGL
Ga0318551_1090730613300031896SoilVQLDVDANEARALLNLLMDAIEADRYPMSPRIRVLKD
Ga0306923_1005405613300031910SoilMILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQAILGKCGEVGG
Ga0306923_1049667013300031910SoilMKLELTDEETFWLLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVGGLSN
Ga0306923_1175894713300031910SoilMLLDLSDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFAEI
Ga0306923_1200956913300031910SoilMRLDLTDEETFALLNLLVDTIEGDRYPMSPRIRLLREILAKCGEVGGLSNDLEQKLRR
Ga0306923_1209384913300031910SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLRKILAKCGEVGGLPA
Ga0310916_1005728963300031942SoilMRLELTDEETFALLNLLVDTIEGDRYSMSPRIRFLREILAKCGEVGG
Ga0310916_1038356013300031942SoilMAMILDLSDEEARALLNVLIDTIEADRYPMSPRIR
Ga0310916_1107828013300031942SoilLAVLCMRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEIGQASPE
Ga0310916_1143881313300031942SoilMQLDLTDQETFALLNLLVDTIEADRYPMSPRIRLLR
Ga0310913_1001957673300031945SoilMHLDLTDADTLALLNLLVETIEADRYPMSPLFRRLQ
Ga0310913_1097213113300031945SoilMQLDLTDEETFALLNLLVDTIENDRYPSSPRIRLLRQILAKFGEIG
Ga0310910_1054889913300031946SoilMHLDLTDEETLALLNLLIETIEADRYPRSPRIRLLREILGKCGEVGELSPELAARVR
Ga0310909_1161952323300031947SoilMQLDLTDEETSALLNLLVDTIEADRYPMSPRIRLLREILVKFGEIKPVSP
Ga0306926_1008930963300031954SoilMHLDLIDDEARALLNVLIEVIENDRYPMSPRIRAL
Ga0306926_1119506933300031954SoilMQLELTDEETRALLNLLIDVIEADRYPNSPRIRLL
Ga0306926_1162914113300031954SoilMKLELTDEETFWLLNLLVDTIEADRYPMSPRIRLLRAIVRKFGEVG
Ga0306926_1222469723300031954SoilMILYLTNEEMRALLDLLTDAIEADRYPMSPRIRMLKDILMKFGEMGG
Ga0318531_1018018833300031981SoilMILDLSDEETRALLNLLVEAIENDRYPMSPRIRLFREILSKFGELGGLSPELAAR
Ga0318531_1047707823300031981SoilMRLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKFGEVGGLPP
Ga0318531_1051241213300031981SoilMHLDLTDDEARALLNVLIEVIENDRDPMSPRIRALQAILA
Ga0306922_1195703513300032001SoilMNLDLSDEETRALLNLLIDTIEADHYPNSPRIRLLREILA
Ga0310911_1033131623300032035SoilMTLDLTDEETLALLNLLIDTIEADRYPTSPRIRVLREIL
Ga0318558_1002472653300032044SoilMILDLSDEQARAPLNLLIDTIEADRFPNSPRIRLLR
Ga0318575_1039959413300032055SoilMNLDLDDDEARALLNLLIDVIEADRYPNSPRIRLLREILG
Ga0318533_1023071613300032059SoilMRLDLTDEETFALLNLMVDTIEGDRYPMSPRIRLLREILAKCGEVGGLSNDLEQKLRR
Ga0318533_1035007113300032059SoilMILDLSDEQTRTLLNLLIETIEADRYPRSPRIRLLREILGKCGEVGEL
Ga0318505_1002099663300032060SoilMILDLSDEQAQARLNLLIDTIEADRYPMSPRIRLLQAILGKCGEVGGLPPELGT
Ga0318504_1042232623300032063SoilMQLELTDEETCALLNLLVDTIEADRHPMSPRIRLLREILGKFGEIGPVLP
Ga0318553_1040002923300032068SoilMQLELIAEETRALLNLLIEVIENDRYPMSPRIRLLRDIPAKFGL
Ga0306924_1018176853300032076SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILCK
Ga0318525_1047903913300032089SoilMILDLSDEQAQALLNLLIDTIEADRYPMSPRIRLLQ
Ga0318540_1037242713300032094SoilVQLDVDANEARALLNLLMDAIEADRYPMSPRIRVLRDILAKCGDVG
Ga0306920_10142911123300032261SoilMILDLSDEETRALLNLLIDVIEADRFPMSPRVRLLRAIVRKFCEIGPVSPELAQKL
Ga0306920_10287604023300032261SoilMHLDLTDEETRALLNHLVETIEADRYPMSPRIRALRAILVKFGGVGGLSPEMAAWL
Ga0310914_1077403613300033289SoilMQLDLTDEETFALLNLLVDTIEADRYPMSPRIRLLREILAKCGEVGG


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