Metagenome / Metatranscriptome Family F063251

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063251
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	77 residues
Representative Sequence	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV
Number of Associated Samples	74
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.09 %
% of genes near scaffold ends (potentially truncated)	35.66 %
% of genes from short scaffolds (< 2000 bps)	88.37 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (58.915 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.132 % of family members)
Environment Ontology (ENVO)	Unclassified (48.837 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 85.53% β-sheet: 0.00% Coil/Unstructured: 14.47%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13545	HTH_Crp_2	44.19
PF03401	TctC	3.10
PF01381	HTH_3	2.33
PF04964	Flp_Fap	1.55
PF01068	DNA_ligase_A_M	1.55
PF00106	adh_short	0.78
PF13676	TIR_2	0.78
PF04324	Fer2_BFD	0.78
PF00083	Sugar_tr	0.78
PF13202	EF-hand_5	0.78
PF03734	YkuD	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.10
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.55
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.55
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.55
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
All Organisms	root	All Organisms	41.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
cellular organisms	root	All Organisms → cellular organisms	41.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.55 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.55 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.65 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.78 %
Bradyrhizobium sp. CCBAU 51765	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 51765	0.78 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10025240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1619	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1045490	Not Available	790	Open in IMG/M
3300004633\|Ga0066395_10628489	Not Available	632	Open in IMG/M
3300004633\|Ga0066395_10892030	Not Available	538	Open in IMG/M
3300005332\|Ga0066388_100086183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3540	Open in IMG/M
3300005332\|Ga0066388_100262669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2367	Open in IMG/M
3300005332\|Ga0066388_102542709	Not Available	931	Open in IMG/M
3300005332\|Ga0066388_103622967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300005332\|Ga0066388_103831090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 51765	767	Open in IMG/M
3300005332\|Ga0066388_104378918	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_104597815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300005764\|Ga0066903_107207493	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_107975196	Not Available	543	Open in IMG/M
3300006052\|Ga0075029_101156853	Not Available	539	Open in IMG/M
3300009792\|Ga0126374_10710648	Not Available	757	Open in IMG/M
3300009792\|Ga0126374_10812529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300009792\|Ga0126374_10921977	Not Available	679	Open in IMG/M
3300010046\|Ga0126384_10317127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300010048\|Ga0126373_10481069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300010048\|Ga0126373_11573858	Not Available	722	Open in IMG/M
3300010048\|Ga0126373_11982849	Not Available	645	Open in IMG/M
3300010358\|Ga0126370_10133163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1783	Open in IMG/M
3300010359\|Ga0126376_10448825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1178	Open in IMG/M
3300010359\|Ga0126376_12055400	Not Available	614	Open in IMG/M
3300010360\|Ga0126372_11409071	Not Available	730	Open in IMG/M
3300010361\|Ga0126378_10622096	All Organisms → cellular organisms → Bacteria → Proteobacteria	1193	Open in IMG/M
3300010361\|Ga0126378_12581345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300010362\|Ga0126377_11363168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300010366\|Ga0126379_10250624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1744	Open in IMG/M
3300010366\|Ga0126379_10672207	Not Available	1127	Open in IMG/M
3300010366\|Ga0126379_11337632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300010366\|Ga0126379_13428569	Not Available	531	Open in IMG/M
3300010376\|Ga0126381_100516882	Not Available	1687	Open in IMG/M
3300010376\|Ga0126381_100546459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1640	Open in IMG/M
3300010376\|Ga0126381_100585613	Not Available	1585	Open in IMG/M
3300010376\|Ga0126381_101179420	Not Available	1107	Open in IMG/M
3300010376\|Ga0126381_103779785	Not Available	592	Open in IMG/M
3300010376\|Ga0126381_104606798	Not Available	531	Open in IMG/M
3300012198\|Ga0137364_10981007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300012917\|Ga0137395_10269721	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012948\|Ga0126375_10248746	Not Available	1203	Open in IMG/M
3300012971\|Ga0126369_10082077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2863	Open in IMG/M
3300012971\|Ga0126369_10720159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300012971\|Ga0126369_13360028	Not Available	524	Open in IMG/M
3300016270\|Ga0182036_11528108	Not Available	561	Open in IMG/M
3300016294\|Ga0182041_10351910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1238	Open in IMG/M
3300016294\|Ga0182041_10357874	Not Available	1229	Open in IMG/M
3300016319\|Ga0182033_11265995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300016341\|Ga0182035_10695328	Not Available	885	Open in IMG/M
3300016357\|Ga0182032_10433519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300016371\|Ga0182034_10327531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300016371\|Ga0182034_10650362	Not Available	893	Open in IMG/M
3300016371\|Ga0182034_11676304	Not Available	559	Open in IMG/M
3300016387\|Ga0182040_11566984	Not Available	560	Open in IMG/M
3300016404\|Ga0182037_10609830	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300016404\|Ga0182037_11536825	Not Available	591	Open in IMG/M
3300016422\|Ga0182039_10404911	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300016422\|Ga0182039_10775032	Not Available	850	Open in IMG/M
3300016422\|Ga0182039_11915747	Not Available	544	Open in IMG/M
3300016445\|Ga0182038_10237221	Not Available	1458	Open in IMG/M
3300016445\|Ga0182038_11217997	Not Available	671	Open in IMG/M
3300017822\|Ga0187802_10005643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3802	Open in IMG/M
3300017928\|Ga0187806_1377914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300017932\|Ga0187814_10010033	All Organisms → cellular organisms → Bacteria	3704	Open in IMG/M
3300017943\|Ga0187819_10113673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1616	Open in IMG/M
3300017970\|Ga0187783_10082063	Not Available	2375	Open in IMG/M
3300017970\|Ga0187783_10526751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	856	Open in IMG/M
3300017970\|Ga0187783_11018134	Not Available	597	Open in IMG/M
3300017973\|Ga0187780_10792700	Not Available	685	Open in IMG/M
3300017995\|Ga0187816_10587582	Not Available	501	Open in IMG/M
3300018006\|Ga0187804_10336577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300021560\|Ga0126371_10015045	All Organisms → cellular organisms → Bacteria → Proteobacteria	7067	Open in IMG/M
3300021560\|Ga0126371_10239125	Not Available	1926	Open in IMG/M
3300021560\|Ga0126371_10951646	Not Available	1002	Open in IMG/M
3300021560\|Ga0126371_13459357	Not Available	533	Open in IMG/M
3300027042\|Ga0207766_1033224	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300027874\|Ga0209465_10120420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1294	Open in IMG/M
3300030946\|Ga0075379_11126992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300031057\|Ga0170834_104551115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300031474\|Ga0170818_107625018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300031543\|Ga0318516_10218151	Not Available	1103	Open in IMG/M
3300031545\|Ga0318541_10027625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2783	Open in IMG/M
3300031545\|Ga0318541_10330396	Not Available	851	Open in IMG/M
3300031545\|Ga0318541_10355352	Not Available	818	Open in IMG/M
3300031545\|Ga0318541_10457688	Not Available	713	Open in IMG/M
3300031546\|Ga0318538_10664843	Not Available	565	Open in IMG/M
3300031561\|Ga0318528_10490579	Not Available	660	Open in IMG/M
3300031573\|Ga0310915_10199954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300031573\|Ga0310915_10388332	Not Available	991	Open in IMG/M
3300031573\|Ga0310915_10595198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300031719\|Ga0306917_10464524	Not Available	992	Open in IMG/M
3300031719\|Ga0306917_11550679	Not Available	509	Open in IMG/M
3300031744\|Ga0306918_11550446	Not Available	505	Open in IMG/M
3300031753\|Ga0307477_10076752	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300031754\|Ga0307475_10066162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2753	Open in IMG/M
3300031771\|Ga0318546_11060549	Not Available	570	Open in IMG/M
3300031798\|Ga0318523_10174751	Not Available	1071	Open in IMG/M
3300031798\|Ga0318523_10578249	Not Available	554	Open in IMG/M
3300031833\|Ga0310917_10428951	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300031845\|Ga0318511_10333865	Not Available	689	Open in IMG/M
3300031860\|Ga0318495_10464974	Not Available	554	Open in IMG/M
3300031879\|Ga0306919_10191059	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300031897\|Ga0318520_10426757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300031910\|Ga0306923_10101320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3250	Open in IMG/M
3300031910\|Ga0306923_10735295	Not Available	1095	Open in IMG/M
3300031910\|Ga0306923_10884643	Not Available	980	Open in IMG/M
3300031910\|Ga0306923_11959725	Not Available	596	Open in IMG/M
3300031912\|Ga0306921_10065053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4170	Open in IMG/M
3300031912\|Ga0306921_10155182	Not Available	2679	Open in IMG/M
3300031941\|Ga0310912_10807957	Not Available	724	Open in IMG/M
3300031942\|Ga0310916_10716273	Not Available	846	Open in IMG/M
3300031942\|Ga0310916_10739423	Not Available	831	Open in IMG/M
3300031942\|Ga0310916_11272923	Not Available	606	Open in IMG/M
3300031947\|Ga0310909_10808002	Not Available	774	Open in IMG/M
3300031947\|Ga0310909_11274153	Not Available	592	Open in IMG/M
3300031954\|Ga0306926_12194594	Not Available	615	Open in IMG/M
3300031954\|Ga0306926_12942263	Not Available	510	Open in IMG/M
3300031959\|Ga0318530_10188877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300031981\|Ga0318531_10186955	Not Available	933	Open in IMG/M
3300032001\|Ga0306922_10106507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2970	Open in IMG/M
3300032001\|Ga0306922_11012849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	856	Open in IMG/M
3300032035\|Ga0310911_10037373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2465	Open in IMG/M
3300032052\|Ga0318506_10537450	Not Available	518	Open in IMG/M
3300032068\|Ga0318553_10285705	Not Available	863	Open in IMG/M
3300032180\|Ga0307471_100576506	Not Available	1282	Open in IMG/M
3300032261\|Ga0306920_100516140	Not Available	1772	Open in IMG/M
3300032261\|Ga0306920_100899785	Not Available	1294	Open in IMG/M
3300032261\|Ga0306920_101163496	Not Available	1116	Open in IMG/M
3300032261\|Ga0306920_102141708	Not Available	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.57%
Aquatic	Environmental → Aquatic	5.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.57%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.40%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030946	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100252403	3300000597	Forest Soil	MSEKIVSIRENESVRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV*
AF_2010_repII_A100DRAFT_10454901	3300000655	Forest Soil	MSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV*
Ga0066395_106284891	3300004633	Tropical Forest Soil	MSENIVSICKNESVRSVTVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0066395_108920301	3300004633	Tropical Forest Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDALVVIRRGLGGV*
Ga0066388_1000861836	3300005332	Tropical Forest Soil	MSEKFISEKVVSVCENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRRGLGGV*
Ga0066388_1002626692	3300005332	Tropical Forest Soil	MSEKVVSVYENDNLTSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRIAHNHLEALIAIRHSLSGVYAPAASRYWPQFAAPHLS*
Ga0066388_1025427092	3300005332	Tropical Forest Soil	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLERESRDNHYASGALRVAHNHLDALVVIRRGLGGV*
Ga0066388_1036229672	3300005332	Tropical Forest Soil	MSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLEALIAIRQGLSGV*
Ga0066388_1038310903	3300005332	Tropical Forest Soil	LRSATVNAVDALDREIDAVWGLIAIIEILDRESRNDHYASGALRVAHNHLEALIAIRHGLGGV*
Ga0066388_1043789182	3300005332	Tropical Forest Soil	VAVPGGLVFMSENIVSICENESLRSVTVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0066903_1045978151	3300005764	Tropical Forest Soil	MSEKVFSVYENDNLSSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDA
Ga0066903_1072074931	3300005764	Tropical Forest Soil	RSVTVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0066903_1079751961	3300005764	Tropical Forest Soil	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRRGLGGV*
Ga0075029_1011568531	3300006052	Watersheds	KFMSEKVVSVYKNDDLHSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV*
Ga0126374_107106483	3300009792	Tropical Forest Soil	MSEKFMSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYANGALRVAHNHLEALIAIRQGLSGV*
Ga0126374_108125291	3300009792	Tropical Forest Soil	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV*
Ga0126374_109219772	3300009792	Tropical Forest Soil	SEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0126384_103171272	3300010046	Tropical Forest Soil	MSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRGNHYASGALRIAHNHLDALIAIRRGLGGV*
Ga0126373_104810692	3300010048	Tropical Forest Soil	MSEKVFSVYENDSLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV*
Ga0126373_115738583	3300010048	Tropical Forest Soil	RAVAVPGGLVFMSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEVLERESRDHHYASGALRIAHNHLDALVVIRRGLGGV*
Ga0126373_119828492	3300010048	Tropical Forest Soil	MSEKFMSEKVVSVYENDNLRSATVNAIDALDGEIDAVWGLIAIIEVLDRESRDDHYASGALRVAHNHLEALIAIRQGLSGV*
Ga0126370_101331631	3300010358	Tropical Forest Soil	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0126376_104488252	3300010359	Tropical Forest Soil	MSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESHNDHYASGALRVAHNHLDALIAIRSGLSGI*
Ga0126376_120554002	3300010359	Tropical Forest Soil	VSICENESLRSVTVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALHIAHNHLDALIAIRRGLGGV*
Ga0126372_114090712	3300010360	Tropical Forest Soil	MSEKVFSVYENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLEALIAIRQGLSGV*
Ga0126378_106220962	3300010361	Tropical Forest Soil	SIRENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV*
Ga0126378_125813451	3300010361	Tropical Forest Soil	MSEKFMSEKVVSVYENDNLRSATVDAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRIAHNHLDALVAIRRDLGAV*
Ga0126377_113631681	3300010362	Tropical Forest Soil	MSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRSGLSGI*
Ga0126379_102506242	3300010366	Tropical Forest Soil	MSEKFMSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESHNDHYASGALRVAHNHLDALIAIRSGLSGI*
Ga0126379_106722073	3300010366	Tropical Forest Soil	MSEKIVSIRENESVRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALHIAHNHLDALIAIRRGLGGV*
Ga0126379_113376321	3300010366	Tropical Forest Soil	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV*
Ga0126379_134285691	3300010366	Tropical Forest Soil	ENLRSATVNAVDALDREIDAVWGLIAIIEVLERESRDHHYVSGALRVAHNHLDALVVIRRGLGGV*
Ga0126381_1005168821	3300010376	Tropical Forest Soil	LVFMSENIVSICENESLRSVTVNAVDALDREIDAVWGLIAIFEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0126381_1005464591	3300010376	Tropical Forest Soil	MSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLEALIAIRHGLSGV*
Ga0126381_1005856134	3300010376	Tropical Forest Soil	SATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV*
Ga0126381_1011794202	3300010376	Tropical Forest Soil	VYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALISIRRGLGGV*
Ga0126381_1037797851	3300010376	Tropical Forest Soil	MSEKIVSIYENENLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV*
Ga0126381_1046067981	3300010376	Tropical Forest Soil	PGIFMSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDALVVIRRGLGGV*
Ga0137364_109810072	3300012198	Vadose Zone Soil	MSEKVISVNENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV*
Ga0137395_102697211	3300012917	Vadose Zone Soil	MSEKVISVYENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV*
Ga0126375_102487461	3300012948	Tropical Forest Soil	MSEKFMSEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRSGLSGI*
Ga0126369_100820772	3300012971	Tropical Forest Soil	MSENIVCIRETDNIRSMTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDALIAIRQNLGQT*
Ga0126369_107201591	3300012971	Tropical Forest Soil	MSEKFMSEKFISEKVVSVYENDNLRSATVNAIDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRRGLGGV*
Ga0126369_133600282	3300012971	Tropical Forest Soil	ENIVSICKNESVRSVTVNAVDALDREIDAVWGLIAIIEVLDRESHDNHYASGALRIAHNHLDALVAIRRGLGGV*
Ga0182036_115281082	3300016270	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAVIEVLDRESRDNHYASGALHIAHNHLDALIAIRRCLGGV
Ga0182041_103519101	3300016294	Soil	IVSIFNNESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRIAHTHLDALVAIRRGLAGV
Ga0182041_103578742	3300016294	Soil	MSEKIVSICENQSLRSATVNAVDALDREIDAVWGLIAVIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV
Ga0182033_112659951	3300016319	Soil	MSEKIVSICQNESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRR
Ga0182035_106953283	3300016341	Soil	MSENIVSIFDNESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRRGLGGV
Ga0182032_104335191	3300016357	Soil	NYRKRRSFSTCRGGTRGLVFMSENIVSIFNNESLRSATVNAVDALDREIEAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0182034_103275311	3300016371	Soil	VAVTGGLVFMSEKIVSICENQSLRSATVNAVDALDREIDAVWGLIAVIEVLDRESRDNHYASGALHIAHNHLDALIAIRRCLGGV
Ga0182034_106503622	3300016371	Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLNALIAIRQNLGRI
Ga0182034_116763042	3300016371	Soil	RAVAVPGELVFMSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEVLERESRDNHYASGALRVAHNHLDALVVIRRGLGGV
Ga0182040_115669841	3300016387	Soil	MSEKIVSICENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALHIAHHHLDALIAIRRGLGGI
Ga0182037_106098301	3300016404	Soil	NESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0182037_115368252	3300016404	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALVAIRRGLA
Ga0182039_104049113	3300016422	Soil	MSENIVSIFDNESLRSATVNAVDALDREIEAVWGLIAIIEILDRESRDNHYASGALLVAHNHLDALVAIRRGLAGV
Ga0182039_107750322	3300016422	Soil	MSENIVSIRETDNIHSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDALIAIRQNLGRI
Ga0182039_119157471	3300016422	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRVAHNHLDALI
Ga0182038_102372213	3300016445	Soil	VFMSEKIVSICENENLHSATINAVDALDREIDTVWGLIAIIEVLDRESRDDRYASGALRVAHNHLDALIDIRRGLSGV
Ga0182038_112179971	3300016445	Soil	MSEKIVSICENESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRRGLGGV
Ga0187802_100056434	3300017822	Freshwater Sediment	MSEKFMSEKVVSVYKNDDLHSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV
Ga0187806_13779141	3300017928	Freshwater Sediment	MSEKFMSEKVVSVYKNDDLHSATVNAVDALDREIDAVWGLIAIIEVLGRESRNDHYASGALRVAHNHLDALVAIRRDLG
Ga0187814_100100333	3300017932	Freshwater Sediment	MSEKFMSEKVVSVYKNDDLHSATVNAVDALDREIDAVWGLIAIIEVLGRESRNDHYASGALRVAHNHLDALVAIRRDLGAV
Ga0187819_101136732	3300017943	Freshwater Sediment	MSEKFMSEKVVSVYKNDDLHSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHL
Ga0187783_100820632	3300017970	Tropical Peatland	MSEKIVSICENERSATINAVDALDREIDAVWGLIAIIEVLDRESHNNNYASGALRVAHNHLDALIAIRRGLSGA
Ga0187783_105267512	3300017970	Tropical Peatland	MSEKIVSIGQNENVRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNQYASGALRVAHNHLDALIAIRRGLSGV
Ga0187783_110181342	3300017970	Tropical Peatland	MSEKIVSICENERSATINAVDALDREIDAVCLIAIIEVLDRESHNNKYASGALRVAHNHLDALIAIRRGLSGA
Ga0187780_107927001	3300017973	Tropical Peatland	MSEKIVSIYENDDLRSVKAVDALDREINAVWGLIAIIEVLDRESRDDRYASGALRVAHNHLDALIDIRRGLGGL
Ga0187816_105875821	3300017995	Freshwater Sediment	MFETFMSEKIVSIYENDNLRSATVSAVDTLDREIDAVWGLIAIIEVLNRESRDDNYASGALRVAHNHL
Ga0187804_103365772	3300018006	Freshwater Sediment	MSEKFMSEKVVSVYKNDDLHSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLAVC
Ga0126371_1001504511	3300021560	Tropical Forest Soil	MSEKIVSIRENESLRSATVDAIDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV
Ga0126371_102391252	3300021560	Tropical Forest Soil	MSENIVSIYENESLRSVTVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV
Ga0126371_109516461	3300021560	Tropical Forest Soil	MSEKVFSVYENDNLSSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRRGLGGV
Ga0126371_134593572	3300021560	Tropical Forest Soil	MSEKVISVYENDNLRSATVNAIDALDGEIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLEALIAIRHGLSGV
Ga0207766_10332242	3300027042	Tropical Forest Soil	MSEKIISICENENLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRRGLGGV
Ga0209465_101204202	3300027874	Tropical Forest Soil	MSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLGGV
Ga0075379_111269921	3300030946	Soil	MAIPGRVINPGLQRRSMSEKFMSEKVISVYENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDL
Ga0170834_1045511152	3300031057	Forest Soil	MAIPGRVINPGLQRRSMSEKFMSEKVISVYENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV
Ga0170818_1076250182	3300031474	Forest Soil	MAIPGRVINPGLQRRSMSEKFMSEKVISVYENDNIRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRRDLGAV
Ga0318516_102181512	3300031543	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYARGALRIAHNHLDALIAIRRGLGGV
Ga0318541_100276251	3300031545	Soil	MSEKFISEKVVSVCENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRRGLGGV
Ga0318541_103303962	3300031545	Soil	MSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRRGLGGV
Ga0318541_103553521	3300031545	Soil	VPRLRAVAVPGGLVFMSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYARGALRIAHNHLDALIAIRRGLGGV
Ga0318541_104576882	3300031545	Soil	MSEKIVSIYENENIRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV
Ga0318538_106648431	3300031546	Soil	SESLRTATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV
Ga0318528_104905791	3300031561	Soil	MSEKIVSICENQSLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV
Ga0310915_101999542	3300031573	Soil	MSEKIVSICENENLHSATINAVDALDREIDTVWGLIAIIEVLDRESRDHHYASGALRVAHNHLDALIDIRRGLSGV
Ga0310915_103883323	3300031573	Soil	MSEKIVSIYENENIRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0310915_105951982	3300031573	Soil	MSENIVSIFDNESLRSATVNAVDALDREIDAVWGLIAIIEILDRENRDNHYASGALRVAHNHLDALIAIRRGLGGV
Ga0306917_104645243	3300031719	Soil	MSENIVSIFNNESLRSATVNAVDALDREIEAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0306917_115506791	3300031719	Soil	ENENLRSATINAVDALDREVDTVWGLIAIIEVLDRESRDHHYASGALRVAHNHLDALIAIRDGLSACPSASRTT
Ga0306918_115504462	3300031744	Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHSHLDALIA
Ga0307477_100767521	3300031753	Hardwood Forest Soil	MAMPGRVINPGLQRRSMSEKFMSEKVISVYENDSLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV
Ga0307475_100661621	3300031754	Hardwood Forest Soil	MAMPGRVINPGLQRRSMSEKFMSEKVISVYENDSLRSATVNAVDALAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV
Ga0318546_110605491	3300031771	Soil	VFMSEKIVSIYENENIRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV
Ga0318523_101747511	3300031798	Soil	NQSRLAAQVFMSEKFISEKVVSVCENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALIAIRRGLGGV
Ga0318523_105782492	3300031798	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHL
Ga0310917_104289511	3300031833	Soil	LAVAVPGGLVFMSENIVSIFDNESLRSATVNAVDALDREIEAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0318511_103338652	3300031845	Soil	MSEKIVSIYENESLRSATVNAVDALDREIEAVWGLIAIIEVLERESRDNHYASGALRVAHNHLDALVVIRRGLGGV
Ga0318495_104649741	3300031860	Soil	MSENIVSIFNNESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0306919_101910595	3300031879	Soil	MSENIVSIFDNESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0318520_104267572	3300031897	Soil	MSENIVSIFDNESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV
Ga0306923_101013201	3300031910	Soil	MSEKIVSICENENLRSATINAVDALDREIDTVWGLIAIIEVLDRESRDHHYASGALRVAHNHLDALIAIRDGLSACPSASRTT
Ga0306923_107352952	3300031910	Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHSHLDALIAIRQNLDQI
Ga0306923_108846432	3300031910	Soil	FMSEKIVSIYENDDLRSATVKAVDALDREINAVWGLIAIIEVLDRESRDDRYASGALRVAHNHLDALIDIRRGLGGL
Ga0306923_119597252	3300031910	Soil	ENENLRSATVNAVRALDREIDAVWGLIAIIEVLDRESRDNHYASGALLVAHNHLDALVAIRRGLGGV
Ga0306921_100650533	3300031912	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAVIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV
Ga0306921_101551821	3300031912	Soil	VPGGLVFMSEKIVSICENENLHSATINAVDALDREIDTVWGLIAIIEVLDRESRDHHYASGALRVAHNHLDALIDIRRGLSGV
Ga0310912_108079571	3300031941	Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDALIAIRQNLDRI
Ga0310916_107162731	3300031942	Soil	STCRGGTRGLVFMSENIVSIFDNESLRSATVNAVDALDREIEAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0310916_107394232	3300031942	Soil	AAVPGGLVSMSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAVIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV
Ga0310916_112729231	3300031942	Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDALIAIRQNLGRI
Ga0310909_108080022	3300031947	Soil	MSENIVSIRETDNIRSTTVNAVDALDREIDAVWGLIAIIEVIHREIGGDHYASGALRVAHNHLDAL
Ga0310909_112741532	3300031947	Soil	MSEKIVSICENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRVAHNHLDALVAIRRGLGGV
Ga0306926_121945941	3300031954	Soil	MSEKIVSICENENLRSATVNAVDALDREIDAVWGLIAIIEVLERESRDNHYASGALRVAHNHLDALVVIRRGLGGV
Ga0306926_129422631	3300031954	Soil	MSEKIVSICENENLRSATINAVDALDREIDTVWGLIAIIEVLDRESRDHHYASGALRVAHNHLD
Ga0318530_101888772	3300031959	Soil	MSEKFISEKVVSVCENDNLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNQYASGALRVAHNHLDALIAIRRGLGGV
Ga0318531_101869552	3300031981	Soil	MSEKIVSICENQSLRSATVNAVDALDREIEAVWGLIAIIEILDRESRDNHYASGALRIAHNHLDGLVAIRRGLAGV
Ga0306922_101065075	3300032001	Soil	GGLVFMSEKIVSICENENLRSATINAVDALDREIDTVWGLIAIIEVLDRESRDHHYASGALRVAHNHLDALIDIRRGLSGV
Ga0306922_110128491	3300032001	Soil	RVRCSASEKIVSICENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALLVAHNHLDALVAIRRGLGGV
Ga0310911_100373731	3300032035	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYARGALRIAHNHLDALIAIRR
Ga0318506_105374501	3300032052	Soil	MSENIVSIFDNESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALVAIRRGLAGV
Ga0318553_102857052	3300032068	Soil	MSEKIVSIYENESLRSATVNAVDALDREIDAVWGLIAIIEILDRESRDNHYASGALRVAHNHLDALIAIRRGLGGV
Ga0307471_1005765061	3300032180	Hardwood Forest Soil	RVINPGLQRRSMSEKFMSEKVISVYENDSLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRNDHYASGALRVAHNHLDALVAIRRDLGAV
Ga0306920_1005161403	3300032261	Soil	MSEKIVSIYENDDLRSATVKAVDALDREINAVWGLIAIIEVLDRESRDDRYASGALRVAHNHLDALIDIRRGLGGL
Ga0306920_1008997853	3300032261	Soil	VGLVFMSEKIISICENENLRSATVNAVDALDREIDVVWGLIAIIEVLDRESRDYHYASGALCIAHNHLDALVAIRRGLGGV
Ga0306920_1011634963	3300032261	Soil	MSEKIVSIRENESLRSATVNAVDALDREIDAVWGLIAIIEVLERESRDNHYASGALRVAHNHLDALVVIRRGLGGV
Ga0306920_1021417081	3300032261	Soil	MSEKIVSICENESLRSATVNAVDALDREIDAVWGLIAIIEVLDRESRDNHYASGALRIAHNHLDALIAIRRGLGGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences