Metagenome / Metatranscriptome Family F063244

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Overview

Basic Information
Family ID	F063244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	48 residues
Representative Sequence	VARTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGVDG
Number of Associated Samples	81
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	93.02 %
% of genes from short scaffolds (< 2000 bps)	94.57 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.225 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (46.512 % of family members)
Environment Ontology (ENVO)	Unclassified (86.822 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (85.271 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1Ga0070670_1010653491 2Ga0070668_1014228611 3Ga0070668_1017474312 4Ga0070669_1010679132 5Ga0070671_1004541022 6Ga0070671_1008423721 7Ga0068859_1012112522 8Ga0068859_1020816932 9Ga0068861_1021259271 10Ga0068863_1002063231 11Ga0068863_1009736751 12Ga0068860_1011401052 13Ga0068860_1027377403 14Ga0105139_10643911 15Ga0134124_104907771 16Ga0134127_109307871 17Ga0182183_10954151 18Ga0182100_10645771 19Ga0182100_10742871 20Ga0182101_10056871 21Ga0182103_10036772 22Ga0182180_10171571 23Ga0182180_10826351 24Ga0182180_10939461 25Ga0182182_10735641 26Ga0182164_10168642 27Ga0182164_10333912 28Ga0182121_10645781 29Ga0182121_11267162 30Ga0182130_11269291 31Ga0182165_10268572 32Ga0182165_11028761 33Ga0182148_11258892 34Ga0182166_11108141 35Ga0182131_10414131 36Ga0182131_10985111 37Ga0182117_11033791 38Ga0182117_11404761 39Ga0182132_10478141 40Ga0182132_11078191 41Ga0182116_10318001 42Ga0182150_11392931 43Ga0182149_10712641 44Ga0182133_10405561 45Ga0182115_13046321 46Ga0182185_11901091 47Ga0182163_10724892 48Ga0182163_11026941 49Ga0182163_11440201 50Ga0182163_12161331 51Ga0182169_11680971 52Ga0182169_11713191 53Ga0182169_11810233 54Ga0182179_12925911 55Ga0182167_10567381 56Ga0182167_13507281 57Ga0182167_13516181 58Ga0182197_10249492 59Ga0182199_10515641 60Ga0182199_11917651 61Ga0182195_10755101 62Ga0182195_11324641 63Ga0182213_10625421 64Ga0182213_11553711 65Ga0182201_10594981 66Ga0182200_10680021 67Ga0182198_11502981 68Ga0182216_10805591 69Ga0182216_11286061 70Ga0182178_10023281 71Ga0182178_10032942 72Ga0182178_10133421 73Ga0182118_1060921 74Ga0182118_1096241 75Ga0207680_108950331 76Ga0207641_126007351 77Ga0268328_10059441 78Ga0268328_10226111 79Ga0268328_10432311 80Ga0268328_10605402 81Ga0268344_10012992 82Ga0268346_10017561 83Ga0268306_10068931 84Ga0268352_10341442 85Ga0268314_10089301 86Ga0268314_10240391 87Ga0268314_10305011 88Ga0268314_10407111 89Ga0268314_10439891 90Ga0268342_10012071 91Ga0268342_10022421 92Ga0268350_10482351 93Ga0268340_10634261 94Ga0268340_10698111 95Ga0268355_10020361 96Ga0268355_10173671 97Ga0268347_10014133 98Ga0268347_10192151 99Ga0268345_10210121 100Ga0268354_10137241 101Ga0268353_1036941 102Ga0268343_10107241 103Ga0268336_10113321 104Ga0268336_10286121 105Ga0268336_10306171 106Ga0268320_10071292 107Ga0268351_10200491 108Ga0268312_10011231 109Ga0268312_10109361 110Ga0268324_10235871 111Ga0268316_10028432 112Ga0268310_10111371 113Ga0268310_10118871 114Ga0268317_10115281 115Ga0268315_10044351 116Ga0268315_10216601 117Ga0268331_10019321 118Ga0268331_10145351 119Ga0268327_10014761 120Ga0268327_10052281 121Ga0268327_10121402 122Ga0268329_10113861 123Ga0268309_10220652 124Ga0268305_1043921 125Ga0268305_1087892 126Ga0268335_10081241 127Ga0268311_10126751 128Ga0214488_11397161 129Ga0214497_10791161
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1Ga0070670_1010653491 2Ga0070668_1017474312 3Ga0070669_1010679132 4Ga0070671_1004541022 5Ga0068859_1020816932 6Ga0068860_1011401052 7Ga0105139_10643911 8Ga0134124_104907771 9Ga0182183_10954151 10Ga0182100_10742871 11Ga0182101_10056871 12Ga0182103_10036772 13Ga0182180_10171571 14Ga0182180_10826351 15Ga0182130_11269291 16Ga0182131_10414131 17Ga0182132_10478141 18Ga0182150_11392931 19Ga0182169_11680971 20Ga0182169_11713191 21Ga0182167_13516181 22Ga0182199_11917651 23Ga0182200_10680021 24Ga0182216_10805591 25Ga0182178_10023281 26Ga0268346_10017561 27Ga0268306_10068931 28Ga0268314_10439891 29Ga0268320_10071292 30Ga0268315_10216601 31Ga0268331_10145351 32Ga0268305_1087892 33Ga0214497_10791161
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46. 1Ga0268310_10118871 2Ga0070671_1004541022 3Ga0070671_1008423721 4Ga0068859_1020816932 5Ga0068863_1002063231 6Ga0105139_10643911 7Ga0182183_10954151 8Ga0182100_10645771 9Ga0182100_10742871 10Ga0182103_10036772 11Ga0182180_10826351 12Ga0182180_10939461 13Ga0182130_11269291 14Ga0182165_10268572 15Ga0182148_11258892 16Ga0182166_11108141 17Ga0182131_10414131 18Ga0182117_11033791 19Ga0182150_11392931 20Ga0182115_13046321 21Ga0182179_12925911 22Ga0182167_13507281 23Ga0182199_10515641 24Ga0182199_11917651 25Ga0182200_10680021 26Ga0182216_10805591 27Ga0182216_11286061 28Ga0182178_10023281 29Ga0182178_10032942 30Ga0182118_1060921 31Ga0207641_126007351 32Ga0268344_10012992 33Ga0268314_10240391 34Ga0268314_10407111 35Ga0268340_10634261 36Ga0268345_10210121 37Ga0268336_10286121 38Ga0268320_10071292 39Ga0268312_10011231 40Ga0268316_10028432 41Ga0268331_10019321 42Ga0268331_10145351 43Ga0268327_10052281 44Ga0268327_10121402 45Ga0268305_1087892 46Ga0214488_11397161 47Ga0214497_10791161
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.33% β-sheet: 0.00% Coil/Unstructured: 70.67%
Feature Viewer
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.78 %
Unclassified	root	N/A	99.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.22 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %
Unclassified	root	N/A	99.22 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005331\|Ga0070670_101065349	Not Available	736	Open in IMG/M
3300005347\|Ga0070668_101422861	Not Available	632	Open in IMG/M
3300005347\|Ga0070668_101747431	Not Available	571	Open in IMG/M
3300005353\|Ga0070669_101067913	Not Available	694	Open in IMG/M
3300005355\|Ga0070671_100454102	Not Available	1100	Open in IMG/M
3300005355\|Ga0070671_100842372	Not Available	800	Open in IMG/M
3300005617\|Ga0068859_101211252	Not Available	832	Open in IMG/M
3300005617\|Ga0068859_102081693	Not Available	626	Open in IMG/M
3300005719\|Ga0068861_102125927	Not Available	562	Open in IMG/M
3300005841\|Ga0068863_100206323	Not Available	1891	Open in IMG/M

Showing 1 to 10 of 122 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	1.55%
Host-Associated	Host-Associated	98.45%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	98.45%
Terrestrial	Environmental → Terrestrial	1.55%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	86.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.43%
Soil	Environmental → Terrestrial → Soil	1.55%
Unclassified	Host-Associated → Plants → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.43%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	86.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	86.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	39.53%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	0.78%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	46.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M

Showing 1 to 10 of 81 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070670_1010653491	3300005331	Switchgrass Rhizosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSKGRIGCVRCEKIP
Ga0070668_1014228611	3300005347	Switchgrass Rhizosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSKGWIGCVCCEKILT*
Ga0070668_1017474312	3300005347	Switchgrass Rhizosphere	VARTFALIAPVQYVLQQVSSSYETIPNAPKYYETHRNISSGSNGVDQMC*
Ga0070669_1010679132	3300005353	Switchgrass Rhizosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISL
Ga0070671_1004541022	3300005355	Switchgrass Rhizosphere	LIAPVQYVLQQVSCSYETIPNAPKYYKTHRKNSIGSNGVDWLCLLRKIPT*
Ga0070671_1008423721	3300005355	Switchgrass Rhizosphere	VPQTLALIAPVQYVLQKVSCSYEMIPNAPKYYETDRNISLGSNGADW
Ga0068859_1012112522	3300005617	Switchgrass Rhizosphere	FALIAPVQYVLQQVSCSYETIPNAPKYYETHRNISLGSNGVD*
Ga0068859_1020816932	3300005617	Switchgrass Rhizosphere	FALIALVQYVLQQVSCSYETIPNAPKHCETHQNIGLGSNGVG*
Ga0068861_1021259271	3300005719	Switchgrass Rhizosphere	TYVLIVPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGVDWVHSLRKIST*
Ga0068863_1002063231	3300005841	Switchgrass Rhizosphere	VARTFALIAPVQYVLQQVTCSYETIPNAPKYYEMHQNISLGSNGVDQ
Ga0068863_1009736751	3300005841	Switchgrass Rhizosphere	MAQTFALIAPLQYGLQQVSCSYETIPNAPKYYETDRNISLGSNGAD
Ga0068860_1011401052	3300005843	Switchgrass Rhizosphere	FALIEPVQYVLQQVSCSYGTIPNAPKYYKTDGNISLGSNGVDWAHSLRKISM*
Ga0068860_1027377403	3300005843	Switchgrass Rhizosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNI
Ga0105139_10643911	3300009995	Switchgrass Associated	MAQTFALIALVHTTLCRVSCSYETIPNGPKHYATHQNMSLGSNGMDWVRSLRKI
Ga0134124_104907771	3300010397	Terrestrial Soil	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGADWVCLLRKNPDV
Ga0134127_109307871	3300010399	Terrestrial Soil	VARTIALIAPVLYVLQQVSCSYEMIPNASKYYETDRNISLG
Ga0182183_10954151	3300015270	Switchgrass Phyllosphere	MAQTSVRIEPVEYVLQQVLCSYETI*NAPKYYKTDRNISLGSNGVDWVRSLRKI
Ga0182100_10645771	3300015280	Switchgrass Phyllosphere	VARTFALIALVQYILQQVSCSYETFLNAPKYYETDRNISSGSNGV
Ga0182100_10742871	3300015280	Switchgrass Phyllosphere	ARSFVLIELVQYVVQQVSCSYGTNPNEPKYYEMHQNISLGSNRVDWVRSL*
Ga0182101_10056871	3300015284	Switchgrass Phyllosphere	VA*TFALIAPVQYVLQQVSRSYETIPNAPKYYKMHRNIGIGSNGVDWLRSLPKI
Ga0182103_10036772	3300015293	Switchgrass Phyllosphere	MARTFALIAPVQYFLHQVSCSYEKISNAPKYYETH*NISLGSNGVDWVCLLRK
Ga0182180_10171571	3300015306	Switchgrass Phyllosphere	VARTFVIIAPVLYVLLQVSCSYETIPNAPKYYETDQNLSLGSN
Ga0182180_10826351	3300015306	Switchgrass Phyllosphere	KRDNVERTFALITAVHYVLQQVSCSYGTIPNAPKYYETDRNISLGSNGVDSL*
Ga0182180_10939461	3300015306	Switchgrass Phyllosphere	VATFALIAPVQYVLQQVSCSYETMPNAPKYYEMNRNIGIVSNGVDV
Ga0182182_10735641	3300015311	Switchgrass Phyllosphere	MARTFALIAPVQYFLHQVSCSYEKISNAPKYYETHRNISLGSNG
Ga0182164_10168642	3300015313	Switchgrass Phyllosphere	MARTFALIAPVQYVLQQVSCSYETIPNAPKYYESHRNISLGSNGV
Ga0182164_10333912	3300015313	Switchgrass Phyllosphere	VARTFVIIAPVLYVLLQVSCSYETIPNAPKYYETDQ
Ga0182121_10645781	3300015316	Switchgrass Phyllosphere	MAQTFALIASVQYVLQKVSCSYETIPNAPKYYETD*NISLGSNGA
Ga0182121_11267162	3300015316	Switchgrass Phyllosphere	AQTFALIAPVQYVLQQVSCSYETIPNAPKYYEMHRNIGIGSNGVD*
Ga0182130_11269291	3300015319	Switchgrass Phyllosphere	KHDIVARTFTLVAPVQYVLQQVSSSYKMIPIAPKYYETHQNMSLAYNGVDQVCSLKKFTT
Ga0182165_10268572	3300015320	Switchgrass Phyllosphere	MARTFALIEPVQYVLQQVSCRYGTIPNAPKYYKTDRNISLGSNGVDWV
Ga0182165_11028761	3300015320	Switchgrass Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSK
Ga0182148_11258892	3300015325	Switchgrass Phyllosphere	VARTFALIAPVQYILQQVSCSYETIPNAPKYYETHRNISSVSNGVDQVRWL*
Ga0182166_11108141	3300015326	Switchgrass Phyllosphere	VERTFTLIAPVLYDLQQVSCSYEMIPNASKYYETDRNISLGSNGVDWL
Ga0182131_10414131	3300015331	Switchgrass Phyllosphere	MA*TFALIAPVQFVLQQVKCGYETIPNAPKYYKTDRNNSIGSSGVDG
Ga0182131_10985111	3300015331	Switchgrass Phyllosphere	VARTFVIIAPVLYVLLQVSCSYETIPNAPKYYETDQNLSLGSNEVDWVR
Ga0182117_11033791	3300015332	Switchgrass Phyllosphere	MSRTFVLIEPVQYVLKQVSCSYETIPNAPKYYETHRNISLGSNGVDWVHS
Ga0182117_11404761	3300015332	Switchgrass Phyllosphere	VA*TLVLIALVQYVLQQVSCSDETIPNAPKYYETDRNISLG
Ga0182132_10478141	3300015334	Switchgrass Phyllosphere	TLIAPVHYVLQQVSCSYETIPNAPKYYETDRNINLGSNGVDGVR*
Ga0182132_11078191	3300015334	Switchgrass Phyllosphere	VARNFALIAPVQYVLQQVKCSYETIPNAPKYYETDRNISL
Ga0182116_10318001	3300015335	Switchgrass Phyllosphere	VARTFALIALVQYVLQQVSCSYETIVNAHKYYETDRNISSGSNGVDGARWL
Ga0182150_11392931	3300015336	Switchgrass Phyllosphere	MAQTFALIGPVQYVLRQVSCSYETFPNSPKYYIINQNVSLGSNGVDWVRSLRKIPM*LRGTNF
Ga0182149_10712641	3300015339	Switchgrass Phyllosphere	MARTFVLIEPVQYVLKQVSCSYRTIPNAPKYYEMHRNISLGSNGVDRVRPLRKI
Ga0182133_10405561	3300015340	Switchgrass Phyllosphere	VERTFTLIAPVLYDLQQVSCSYEMIPNASKYYETDRNISLG
Ga0182115_13046321	3300015348	Switchgrass Phyllosphere	MAQPFVLIAPVQYVLHQVSCSYETIPNVPKYYETDRNISLGSNGVD
Ga0182185_11901091	3300015349	Switchgrass Phyllosphere	VA*TFALIAPVQYVLQQVKCGYETIPNAPKYYKTDRNIS
Ga0182163_10724892	3300015350	Switchgrass Phyllosphere	VA*TFALIAPVQYVLQQVSRSYETIPNAPKYYKMHRNIGIGSNGVDWLRSL
Ga0182163_11026941	3300015350	Switchgrass Phyllosphere	VA*TFALIAPVQYVLQQVKCGYETIPNAPKYYETHRNISLG
Ga0182163_11440201	3300015350	Switchgrass Phyllosphere	MARTFALIELVQYVLQQVSCSYETIPNAPKYYETDRNISFGSNGVDW
Ga0182163_12161331	3300015350	Switchgrass Phyllosphere	VARTFALIALVQYVLQQISCSYETIPNAPKYYEMHQNISLG
Ga0182169_11680971	3300015352	Switchgrass Phyllosphere	VARTFALIAPVQYVLQQVSCSYETIPNAPIYYETDRNISLGSNGVEGVCWLRKNTTRLRGTNF
Ga0182169_11713191	3300015352	Switchgrass Phyllosphere	DFVAQTFALIAPVQYVLQKVSCSYETIPNAPKYYETHQNISLGCNGADWVHSL*
Ga0182169_11810233	3300015352	Switchgrass Phyllosphere	PFALIAPVQYVLQQVSCSYETIPNAPKYYEMHQNISLGSNEVD*
Ga0182179_12925911	3300015353	Switchgrass Phyllosphere	VARPFVLIAPVQYVLRQLSCTYETIRNAPKYYETHRNIS
Ga0182167_10567381	3300015354	Switchgrass Phyllosphere	VAPTFALIALVQYFLKQVSCSYEMIPNAPKYYETDRNISLGSN
Ga0182167_13507281	3300015354	Switchgrass Phyllosphere	VA*TFALIAPVQYVLQQFKCSYETIPNAPKYYETDRNISLGSNRVDGV
Ga0182167_13516181	3300015354	Switchgrass Phyllosphere	VQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGADWVCLLRKNADVASCHELLH*
Ga0182197_10249492	3300017408	Switchgrass Phyllosphere	VARTFALIALVQYVLQQVSCSYETIVNAHKYYETDRNISSGSNGVDGARWLR
Ga0182199_10515641	3300017412	Switchgrass Phyllosphere	VARTFVIIAPVLYVLLQVSCSYETIPNAPKYYETDQNLSLGSNEVDW
Ga0182199_11917651	3300017412	Switchgrass Phyllosphere	VAXTLVLIALVQYVLQQGSCSDETIPNAPKYYETDRNISLGSNGV
Ga0182195_10755101	3300017414	Switchgrass Phyllosphere	VAXTFALIAPVQYVLQQDLRSYETIPNAPKYYKMHRNIGIGSNGVD
Ga0182195_11324641	3300017414	Switchgrass Phyllosphere	VAQTFVLFAPIQYVLQQVSCSYETIPNAPKYYETHQNISLGCNGADW
Ga0182213_10625421	3300017421	Switchgrass Phyllosphere	VAXTFALIAPVQYVLQQVSRSYETIPNAPKYYKMHRNIGIGSNGVDWLRSLPKI
Ga0182213_11553711	3300017421	Switchgrass Phyllosphere	TFALIASVLSVLQQVSCSYETIPNAPKYYETHQNISLGCNGADWVHSLGKIPA
Ga0182201_10594981	3300017422	Switchgrass Phyllosphere	VARTFALIAPVQYVLQQVSCSYETIPNAPKYYEKDXNFSFGSNV
Ga0182200_10680021	3300017439	Switchgrass Phyllosphere	VAQTFALIAPVQYVLHHVSCNYETIPKAPKYYKTYXNMTLGSNGVDRVRPLRKIPMC
Ga0182198_11502981	3300017445	Switchgrass Phyllosphere	VARTFALIELVQYVLQQVSCSYETIPNAPKYYETDRNISFGS
Ga0182216_10805591	3300017693	Switchgrass Phyllosphere	MARTFALISPVQYVLQQVSCSYETIPNVPKYFKMDQNISLVSNVVDWV
Ga0182216_11286061	3300017693	Switchgrass Phyllosphere	MARTFALIEPVQYVLQLVSCSYGMIPNAPKYHKMDRNISLGSNGVDWVH
Ga0182178_10023281	3300020023	Switchgrass Phyllosphere	MAQTFALIAPVPFVLQQVLCSYKMIPNAPKYSGTQQNISLES
Ga0182178_10032942	3300020023	Switchgrass Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSNGADWVCLLXKKSRR
Ga0182178_10133421	3300020023	Switchgrass Phyllosphere	MAQTFALIALVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSKGR
Ga0182118_1060921	3300020223	Switchgrass Phyllosphere	VAXTFALIAPVQYVLQQVSRSYETIPNAPKYYKMHRNIGIGSNGVDWLRSLP
Ga0182118_1096241	3300020223	Switchgrass Phyllosphere	VAXTFALIAPVQYVLQQVKCGYETIPNAPKYYKTDRNNSFGSNGVD
Ga0207680_108950331	3300025903	Switchgrass Rhizosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGVDW
Ga0207641_126007351	3300026088	Switchgrass Rhizosphere	VARTFVLIAPVQYVLHQLSCTYETIPNAPKYYELHRNISLGSNGVDW
Ga0268328_10059441	3300028050	Phyllosphere	VAXTFALIAPVQYVLQQVSRSYETIPNAPKYYKMHRNIGIGSNGADWLR
Ga0268328_10226111	3300028050	Phyllosphere	MAQTFAIIAPVQYVLQQVSCSYETIPNASKYYETDQNISLG
Ga0268328_10432311	3300028050	Phyllosphere	VARTFTLIAPVHYVLQQVSCSYETIPNAPKYYETDQNISLGSNGV
Ga0268328_10605402	3300028050	Phyllosphere	VARTFALIAQVQYVLQQVSCSYETIPNAPKYYETDRNISFGSNGVDWVRSLR
Ga0268344_10012992	3300028051	Phyllosphere	MARTFALIEPVQYVLQQVSCSFETIPNAPKYYEMHRNISFGSNGVDWVRSLSKIPT
Ga0268346_10017561	3300028053	Phyllosphere	VRRTFVLIAPVQYVLHQLSCTYETIPNAPKYYEMHQNIS
Ga0268306_10068931	3300028054	Phyllosphere	VAXTFALIAPVQYVLQQVSCNYETMPNAPKYYEMNRNIGIVSNGVDXVCSLQN
Ga0268352_10341442	3300028057	Phyllosphere	MVARTFTLIAPVHYVLQQVSCSYETIPNAPKYYKTDRNISLGSNGVDGVR
Ga0268314_10089301	3300028061	Phyllosphere	VAXTFALIAPVQYVLQQVSCSYETMPNAPKYYEMNRNIGIVSNGV
Ga0268314_10240391	3300028061	Phyllosphere	VAPTFALIALVQYFLKQVSCSYETIPNAPKYYETDRNISLGSNAVDWVHSLRKILS
Ga0268314_10305011	3300028061	Phyllosphere	MAQTSVXIEPVEYVLQQVLCSYETIXNAPKYYKTDRNISLGSNGVDWVRLLRKIPT
Ga0268314_10407111	3300028061	Phyllosphere	RDFVAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETHQNISLGCKGADWVHSL
Ga0268314_10439891	3300028061	Phyllosphere	AKKSQRDFVARTFALITPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGVDGVHWL
Ga0268342_10012071	3300028062	Phyllosphere	VGRTFVLIAPVQYVLHQLSCTYETIPNAPKYYETHRNISLVS
Ga0268342_10022421	3300028062	Phyllosphere	VARTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISSGSNWVDQVRWL
Ga0268350_10482351	3300028063	Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSNGADWVC
Ga0268340_10634261	3300028064	Phyllosphere	VGRTFVLIAPVQYILHQLSCTYETIPNAPKYYETHRNISLVSSGVDQ
Ga0268340_10698111	3300028064	Phyllosphere	AAVQYVLQKVSCSYEMIPNAPKYYETDRNISLGSNGAEWVCLLRKNPDVTSCHELLH
Ga0268355_10020361	3300028139	Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSKGRIGCI
Ga0268355_10173671	3300028139	Phyllosphere	MAXTFALIAPVQYVLQQVSCSYETIPNAPKYYEMHQNISLGSNEVD
Ga0268347_10014133	3300028142	Phyllosphere	IVARTFTLIAPVHYVLQQVSCSYETIPNAPKYYETDRNISLGCNGVDGVR
Ga0268347_10192151	3300028142	Phyllosphere	VAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETHQNIILGCNGADWVHSLXKI
Ga0268345_10210121	3300028144	Phyllosphere	VARTFALIAPVQYVLQQVSGSYEIIPNAPKYYETDRNISSGPSGVD
Ga0268354_10137241	3300028148	Phyllosphere	TFALIAPVLSVLQQVSCSYETIPNAPKYYETHQNISLGCNGADWLHSM
Ga0268353_1036941	3300028149	Phyllosphere	VARTFVIIAPVLYVLLQVSCSYETIPNAPKYYETDQNL
Ga0268343_10107241	3300028150	Phyllosphere	VGRTFVLIAPVQYVLHQLSCTYETIPNAPKYYEMHQNISLGSNGVD
Ga0268336_10113321	3300028152	Phyllosphere	RTFVLIEPVQYVLQQVLCSYETIPNAPNYYETHRNISLGSNGVDWVRSL
Ga0268336_10286121	3300028152	Phyllosphere	MARTFALIAPVQYVLHQVSCSYETIPKPPKYYETHRHISLGSNGVDRVWSLRK
Ga0268336_10306171	3300028152	Phyllosphere	VAQTFALIAPVLSVLQQVSCSYETIPNAPKYYETHQNISLGCNGADWVH
Ga0268320_10071292	3300028153	Phyllosphere	VARTLVLIAPVQYVLQQVLCNYETIPNAPKYYKMDRNISLGSKGRIGCVSYEKIPTXLRATN
Ga0268351_10200491	3300028246	Phyllosphere	MARTFALIAPVQYVLHQVSCSYEMIPNAPKYYETHRNISLGSNGVD
Ga0268312_10011231	3300028248	Phyllosphere	MARTFALITPVQYVLQPVSCSYETIPNPPKYYETDQNLSL
Ga0268312_10109361	3300028248	Phyllosphere	VAQTFALIAPVQYVLQQVSCSYETIPNAPKYYEMHQNISLGCKWGR
Ga0268324_10235871	3300028251	Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTD
Ga0268316_10028432	3300028253	Phyllosphere	VAQTYVLIAAVQYVLQQVSCSYEMIPNAPKYYKTDRNISLGSNGVDS
Ga0268310_10111371	3300028262	Phyllosphere	VARTFALIAPVLSVLQQVSCSYETIPNAPKYYETHQNISLGCNGADWVHSL
Ga0268310_10118871	3300028262	Phyllosphere	VARTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSNGVDG
Ga0268317_10115281	3300028468	Phyllosphere	VAXTFALIAPVQYVLQQVSRSYETIPNAPKYYKMHRNIGIGSNG
Ga0268315_10044351	3300028472	Phyllosphere	KRDMVARTFTLIAPVHYVLQQVSCSYETIPNAPKYYETDRNISLGSNGVDGVR
Ga0268315_10216601	3300028472	Phyllosphere	VGRTFVLIAPVQYILHQLSCTYETIPNAPKYYETHPNISLGSNGVDGVRSL
Ga0268331_10019321	3300028474	Phyllosphere	VAQTFALIAPVLSVLQQVSCSYETIPYAPKHYEVHQNISLGSNGVDQ
Ga0268331_10145351	3300028474	Phyllosphere	MARTCALIAPVQPILHRVLCSNETLPNAPKYYEMHQNMSLGSKGWIGCVRCEKFRCDFVARTFSLI
Ga0268327_10014761	3300028475	Phyllosphere	VARTFTLIAPVHYVLQQVSCSYETIPNAPKYYETDRNISLGCNGVDGV
Ga0268327_10052281	3300028475	Phyllosphere	MAQTLALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSKGRIGCVRC
Ga0268327_10121402	3300028475	Phyllosphere	XTFVLIAPVQYVLQQVSRSYEMIPNAPKYFEMHQNIGIGSNGVDWLRSLRKIPT
Ga0268329_10113861	3300028476	Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETDXNISLGSNGAD
Ga0268309_10220652	3300028477	Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYETDRNISLGSN
Ga0268305_1043921	3300028525	Phyllosphere	VAXTLVLIALVQYVLQQGSCSDETIPNAPKYYETDRNISLGSDG
Ga0268305_1087892	3300028525	Phyllosphere	WGGSGALIAPVQYILQQVSCSYETIQNAPKYYETHRNISSVSNGVDQVRWL
Ga0268335_10081241	3300028527	Phyllosphere	MAQTFALIAPVQYVLPQVSCIYETIPNAPKYYKTDRNICLGSKGRIEC
Ga0268311_10126751	3300028529	Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETIPNAPKYYKTDRNISLGSKGWIGCV
Ga0214488_11397161	3300032467	Switchgrass Phyllosphere	MAQTFALIAPVQYVLQQVSCSYETVPNAPKHYETHQNKSLGSNGVDQVLSL
Ga0214497_10791161	3300032689	Switchgrass Phyllosphere	FALIAPVLSVFQQVSCSYEMIPNATKYYEMHQNISLGCNRADWVHLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters