NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F063135

Metagenome / Metatranscriptome Family F063135

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063135
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 60 residues
Representative Sequence AAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW
Number of Associated Samples 117
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.85 %
% of genes near scaffold ends (potentially truncated) 23.85 %
% of genes from short scaffolds (< 2000 bps) 90.00 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.077 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.538 % of family members)
Environment Ontology (ENVO) Unclassified
(30.769 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.923 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 33.71%    β-sheet: 0.00%    Coil/Unstructured: 66.29%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF00486Trans_reg_C 53.08
PF03951Gln-synt_N 13.85
PF13418Kelch_4 4.62
PF01344Kelch_1 3.08
PF02597ThiS 2.31
PF00781DAGK_cat 1.54
PF13854Kelch_5 0.77
PF14306PUA_2 0.77
PF13964Kelch_6 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG0174Glutamine synthetaseAmino acid transport and metabolism [E] 13.85
COG1597Phosphatidylglycerol kinase, diacylglycerol kinase familyLipid transport and metabolism [I] 3.08
COG1977Molybdopterin synthase sulfur carrier subunit MoaDCoenzyme transport and metabolism [H] 2.31
COG2104Sulfur carrier protein ThiS (thiamine biosynthesis)Coenzyme transport and metabolism [H] 2.31


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.08 %
UnclassifiedrootN/A26.92 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725004|GPKC_F5V46DG03G649UNot Available547Open in IMG/M
3300002568|C688J35102_119833798Not Available788Open in IMG/M
3300002568|C688J35102_120676021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1335Open in IMG/M
3300003324|soilH2_10067844All Organisms → cellular organisms → Bacteria2770Open in IMG/M
3300004022|Ga0055432_10008163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1879Open in IMG/M
3300004081|Ga0063454_100079597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1466Open in IMG/M
3300004081|Ga0063454_100312279All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300004153|Ga0063455_100263371Not Available914Open in IMG/M
3300004156|Ga0062589_101569112All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300004156|Ga0062589_101960768All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300004463|Ga0063356_102908548All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300004643|Ga0062591_101105195All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300005093|Ga0062594_102333023Not Available583Open in IMG/M
3300005163|Ga0066823_10051817Not Available743Open in IMG/M
3300005328|Ga0070676_10198230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1315Open in IMG/M
3300005328|Ga0070676_11398401Not Available537Open in IMG/M
3300005329|Ga0070683_100375278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1355Open in IMG/M
3300005330|Ga0070690_100033545All Organisms → cellular organisms → Bacteria3215Open in IMG/M
3300005331|Ga0070670_100502761All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300005331|Ga0070670_101150538All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005332|Ga0066388_103571717Not Available794Open in IMG/M
3300005332|Ga0066388_107443652All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005336|Ga0070680_100743843All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005337|Ga0070682_100284169All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300005339|Ga0070660_100619162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia906Open in IMG/M
3300005341|Ga0070691_10624583All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005436|Ga0070713_101285889Not Available709Open in IMG/M
3300005440|Ga0070705_100858139All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300005456|Ga0070678_101577833All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300005459|Ga0068867_101366946Not Available656Open in IMG/M
3300005535|Ga0070684_100793284All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300005535|Ga0070684_101185611Not Available718Open in IMG/M
3300005536|Ga0070697_102145474Not Available500Open in IMG/M
3300005544|Ga0070686_101807928All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005546|Ga0070696_100898738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19735Open in IMG/M
3300005547|Ga0070693_100456849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales897Open in IMG/M
3300005719|Ga0068861_101026559All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300005764|Ga0066903_105816524All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005844|Ga0068862_100504631All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300005985|Ga0081539_10041058All Organisms → cellular organisms → Bacteria2709Open in IMG/M
3300006058|Ga0075432_10128101All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300006163|Ga0070715_10033048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2112Open in IMG/M
3300006163|Ga0070715_10124793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1232Open in IMG/M
3300006173|Ga0070716_100191127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1353Open in IMG/M
3300006574|Ga0074056_11812526Not Available613Open in IMG/M
3300006575|Ga0074053_11805210All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300006755|Ga0079222_11704855All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300006794|Ga0066658_10037260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2018Open in IMG/M
3300006903|Ga0075426_11131103Not Available593Open in IMG/M
3300006954|Ga0079219_11153753Not Available664Open in IMG/M
3300009098|Ga0105245_11483939All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300009174|Ga0105241_10437840All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300009553|Ga0105249_10281457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1661Open in IMG/M
3300009553|Ga0105249_11027495All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300009840|Ga0126313_10792877All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300010038|Ga0126315_10244776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae1092Open in IMG/M
3300010044|Ga0126310_11228029Not Available603Open in IMG/M
3300010047|Ga0126382_10725021All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300010362|Ga0126377_12235387All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300010366|Ga0126379_10747881All Organisms → cellular organisms → Bacteria → Terrabacteria group1074Open in IMG/M
3300010400|Ga0134122_10231252All Organisms → cellular organisms → Bacteria1551Open in IMG/M
3300010403|Ga0134123_11721063All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300012212|Ga0150985_109940316All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300012897|Ga0157285_10339325Not Available523Open in IMG/M
3300012905|Ga0157296_10145665All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300012910|Ga0157308_10127314All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300012915|Ga0157302_10033733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1367Open in IMG/M
3300012951|Ga0164300_10246932Not Available904Open in IMG/M
3300012951|Ga0164300_10891080Not Available561Open in IMG/M
3300012955|Ga0164298_11257831Not Available564Open in IMG/M
3300012957|Ga0164303_11171023All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012958|Ga0164299_10296601All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300012961|Ga0164302_10282037All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300012987|Ga0164307_10574824Not Available865Open in IMG/M
3300012988|Ga0164306_10470305All Organisms → cellular organisms → Bacteria → Terrabacteria group961Open in IMG/M
3300012989|Ga0164305_10132224All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300012989|Ga0164305_10313771Not Available1164Open in IMG/M
3300013296|Ga0157374_12370883Not Available558Open in IMG/M
3300013306|Ga0163162_12170758All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300013308|Ga0157375_10207373All Organisms → cellular organisms → Bacteria → Terrabacteria group2117Open in IMG/M
3300013308|Ga0157375_10826881All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300014321|Ga0075353_1220883Not Available516Open in IMG/M
3300014745|Ga0157377_10089307All Organisms → cellular organisms → Bacteria → Terrabacteria group1816Open in IMG/M
3300015371|Ga0132258_12305987All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300015373|Ga0132257_100739376All Organisms → cellular organisms → Bacteria → Terrabacteria group1224Open in IMG/M
3300017965|Ga0190266_10477326All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300018067|Ga0184611_1272324Not Available594Open in IMG/M
3300019356|Ga0173481_10200326All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300021445|Ga0182009_10856946All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300022886|Ga0247746_1105155All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300025326|Ga0209342_10070156All Organisms → cellular organisms → Bacteria3280Open in IMG/M
3300025898|Ga0207692_10691529Not Available661Open in IMG/M
3300025899|Ga0207642_10473131All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300025900|Ga0207710_10147912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1138Open in IMG/M
3300025901|Ga0207688_10012425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4632Open in IMG/M
3300025905|Ga0207685_10006442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3196Open in IMG/M
3300025907|Ga0207645_10177096All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300025912|Ga0207707_11232070Not Available604Open in IMG/M
3300025917|Ga0207660_11597940All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300025919|Ga0207657_10855069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia702Open in IMG/M
3300025920|Ga0207649_11422018All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300025926|Ga0207659_10876553Not Available772Open in IMG/M
3300025936|Ga0207670_11798331Not Available521Open in IMG/M
3300025945|Ga0207679_11217930Not Available691Open in IMG/M
3300026013|Ga0208534_1012513All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300026089|Ga0207648_11236522Not Available701Open in IMG/M
3300026095|Ga0207676_11718498Not Available626Open in IMG/M
3300026118|Ga0207675_100242318All Organisms → cellular organisms → Bacteria1743Open in IMG/M
3300026325|Ga0209152_10008338All Organisms → cellular organisms → Bacteria3659Open in IMG/M
3300027907|Ga0207428_10477770All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300028381|Ga0268264_10084830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2717Open in IMG/M
3300028708|Ga0307295_10063881All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300028714|Ga0307309_10075379Not Available773Open in IMG/M
3300028716|Ga0307311_10249072Not Available528Open in IMG/M
3300028720|Ga0307317_10200329All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300028744|Ga0307318_10158126All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300028802|Ga0307503_10030104All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300028802|Ga0307503_10817155All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300028875|Ga0307289_10063447All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300028880|Ga0307300_10024295All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300028889|Ga0247827_10193129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae1119Open in IMG/M
3300030336|Ga0247826_10612514All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300031226|Ga0307497_10056789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1394Open in IMG/M
3300031366|Ga0307506_10076201All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300031562|Ga0310886_11029597Not Available529Open in IMG/M
3300031740|Ga0307468_100991431All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300031834|Ga0315290_10057845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3167Open in IMG/M
3300031938|Ga0308175_100186309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2030Open in IMG/M
3300031965|Ga0326597_10968632All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300032163|Ga0315281_12066354Not Available543Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.46%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.38%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.08%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.31%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.31%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.31%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.31%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.31%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.54%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.54%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.54%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.77%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.77%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.77%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.77%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.77%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.77%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725004Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004022Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014321Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026013Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPKC_037824902067725004SoilMRAAVDVSAMNAWTTTANLVPTLGLIPLGAAVVATFMQRDPVRVRSRRAGEDRRGRRGSR
C688J35102_11983379813300002568SoilVLCARDRAGADAFAMNGWLSTAKLVPSLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRIRSRDW*
C688J35102_12067602113300002568SoilMNGWLNTAKLVPTLGLIPLGAAVAATFMQRDPARARVRSTGEDDRNRRRTRDR*
soilH2_1006784423300003324Sugarcane Root And Bulk SoilMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRNRRRPRTR*
Ga0055432_1000816323300004022Natural And Restored WetlandsMNAWLTTAKLVPVLGLIPLGAAVQAAFMQREPQRAPLRVSGENTRSPRRSRG*
Ga0063454_10007959733300004081SoilVLCARELARADAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQRDPAKLRVRSTGEDDRKRSRSRDW*
Ga0063454_10031227923300004081SoilMNGWLQTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRPRAW*
Ga0063455_10026337123300004153SoilDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQRDPAKLRVRSTGEDDRKRSRSRDW*
Ga0062589_10156911223300004156SoilVPCFTTDVSAMNAWISTANLVPTLGLIPLGAAVAASFMQRDPARVRVRSTGEDDRKGRGRS*
Ga0062589_10196076823300004156SoilMNTWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0063356_10290854823300004463Arabidopsis Thaliana RhizosphereMNTSATITNLIPTLGLLPLGVAVVASFMQRDPARVRVRPTGEDGRKERGRS*
Ga0062591_10110519513300004643SoilMAAGVDTWGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSRR*
Ga0062594_10233302313300005093SoilMNAWITTANLVPTLGLIPLGAAVAASFMQRDPARVRVRSTGEDDRKGRGRS*
Ga0066823_1005181723300005163SoilMNTWLTTAKLVPTLGLIPLGAAVAAMFMQREPAKVRFRSTGEDDRKRSRSRDW*
Ga0070676_1019823033300005328Miscanthus RhizosphereVLCARDAVAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGE
Ga0070676_1139840123300005328Miscanthus RhizosphereARPAGNDSKVLCARDATAVDAFAMNGWLTTTKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0070683_10037527833300005329Corn RhizosphereMAAGVDTWGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENART
Ga0070690_10003354523300005330Switchgrass RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0070670_10050276123300005331Switchgrass RhizosphereMAAGVDTWGMNACLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSRR*
Ga0070670_10115053813300005331Switchgrass RhizosphereVLCARDAVAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0066388_10357171723300005332Tropical Forest SoilTAKLVPTLGLIPLGAAVAATFMQREPARIRVRSTGEDDRKRSRSRDW*
Ga0066388_10744365223300005332Tropical Forest SoilMNAWLSTAKLVPTLGLIPLGAAVAASFMQREPARTRVRSTGEDDRNRRRSRNR*
Ga0070680_10074384313300005336Corn RhizosphereVLCARDAIAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0070682_10028416913300005337Corn RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQRDPARVRVRSTGEDDRKGRGRS*
Ga0070660_10061916213300005339Corn RhizosphereVLCARDAVAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0070691_1062458313300005341Corn, Switchgrass And Miscanthus RhizosphereVLCARDAAGVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0070713_10128588923300005436Corn, Switchgrass And Miscanthus RhizosphereCARTRRGVDVFAMNAWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRSRSRDW*
Ga0070705_10085813913300005440Corn, Switchgrass And Miscanthus RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0070678_10157783313300005456Miscanthus RhizosphereMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKR
Ga0068867_10136694613300005459Miscanthus RhizosphereWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRSRSRDW*
Ga0070684_10079328423300005535Corn RhizosphereVLCARDAATVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0070684_10118561113300005535Corn RhizosphereMAAGVDTSGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSRR*
Ga0070697_10214547423300005536Corn, Switchgrass And Miscanthus RhizosphereAGNDSKVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0070686_10180792813300005544Switchgrass RhizosphereVPCSTTDVSAMNAWITTANLVPTLGLIPLGAAVAASFMQRDPARVRVRSTGEDDRKGRGRS*
Ga0070696_10089873823300005546Corn, Switchgrass And Miscanthus RhizosphereVLCAREAAAVDDFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0070693_10045684923300005547Corn, Switchgrass And Miscanthus RhizosphereVLCAREAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0068861_10102655913300005719Switchgrass RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPSLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0066903_10581652423300005764Tropical Forest SoilLAMNTWLMTAKLVPALGLIPLGAAVAAVFMQREPAKIRVRSTGEDDRKRSRSRDW*
Ga0068862_10050463123300005844Switchgrass RhizosphereVLCARDAAGVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0081539_1004105833300005985Tabebuia Heterophylla RhizosphereMNGSLTTTTTNLIPTLGLLPLGAAVLASFTKRDPARIRVRSTGEDGRKKRGRS*
Ga0075432_1012810123300006058Populus RhizosphereVLCARDAIAVDAFAMNGWLTTTKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0070715_1003304823300006163Corn, Switchgrass And Miscanthus RhizosphereMNTWLTTAKLVPTLGLIPLGAVVAATFMQREPAKVRVRSTGEDDRKRSRSRDW*
Ga0070715_1012479323300006163Corn, Switchgrass And Miscanthus RhizosphereMNAWLTTAKLVPTLGLIPLGAAVAASFMQREPAKVRVRSTGEDDRKRGRSRDW*
Ga0070716_10019112723300006173Corn, Switchgrass And Miscanthus RhizosphereMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRSRSRDW*
Ga0074056_1181252623300006574SoilLAMNTWLTTAKLVPTLGLIPLGAVVAATFMQREPAKVRVRSTGEDDRKRSRSRDW*
Ga0074053_1180521013300006575SoilLAMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0079222_1170485513300006755Agricultural SoilLAMNTWLTTAKLVPTLGLIPLGAAIAASFMQREPAKVRVRSTGEDDRKRSRSRDW*
Ga0066658_1003726023300006794SoilVLCARDRAGADAFAMNGWLTTAKLVPSLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRIRSRDW*
Ga0075426_1113110323300006903Populus RhizosphereDVLAMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRRRSRDW*
Ga0079219_1115375313300006954Agricultural SoilMNTWLTTAKLVPTLGLIPLGAAVAAVFMQREPAKIRVRSTGEDDRKRSRSRDW*
Ga0105245_1148393913300009098Miscanthus RhizosphereMGAGVDALGMNAWVTTAKLVPVLGLIPLGAAVQATFMQRDPARLSLRADGENARTRRRSRR*
Ga0105241_1043784023300009174Corn RhizosphereVLCARDAAAVDAFAINGWLTPAQLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0105249_1028145723300009553Switchgrass RhizosphereVLCARDATAVDAFAMNGWLTTTKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0105249_1102749523300009553Switchgrass RhizosphereMGAGVDALGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLSLRADGENARIRRRSRR*
Ga0126313_1079287723300009840Serpentine SoilVRSAVDALAMNSWLPTAKLVPTLGLIPLGAAVSAMFMQRDPVLARSRRTGEGRRDRRR
Ga0126315_1024477613300010038Serpentine SoilALAMNSWLPTAKLVPTLGLIPLGAAVSATFMQRDPVLARSRRTGEGRRDRRRART*
Ga0126310_1122802923300010044Serpentine SoilVRSAVDALAMNSWLPTAKLVPTLGLIPLGAAVSATFMQRDPVLARSRRTGEGRRDRRRART*
Ga0126382_1072502113300010047Tropical Forest SoilMNAWLSTAKLVPTLGLIPLGAAVAATFMQREPAQIRLRSTGEDDRKRSRRRTR*
Ga0126377_1223538713300010362Tropical Forest SoilMNGWLTTAKLVATLGLIPLGAAVAASFMQREPARIRVRSTGEDDRNRRRART
Ga0126379_1074788123300010366Tropical Forest SoilMNAWLTTAKLVPALGLIPLGAAVAAVFMQREPAKIRVRSTGEDDRKRSRSRDW*
Ga0134122_1023125223300010400Terrestrial SoilVLCAREAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0134123_1172106323300010403Terrestrial SoilVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRTRRRSRDW*
Ga0150985_10994031623300012212Avena Fatua RhizosphereVLCARELARADAFAMNGWLTTAKLVPTLGLTPLGAAVAASFMQRDPAKLRVRSTGEDDRKRSRSRDW*
Ga0157285_1033932513300012897SoilCALPYVKADVLAMNSVSTLTNLIPTLGLLPLGAAVVASFMQRDPALVRVRRTGEDRRTERGRS*
Ga0157296_1014566523300012905SoilVLCAREAAAVDDFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRSRSRDW*
Ga0157308_1012731413300012910SoilMRRGADVSAMNAWLTTAKLVPTLGLIPLGAAVVATFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0157302_1003373323300012915SoilVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0164300_1024693213300012951SoilVLCARDAAAVDAFAMNGWLSTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRRRPRDW*
Ga0164300_1089108023300012951SoilMNAWLTTAKLVPALGLIPLGAAFAAPFMQREPAKIRFRSTGEDDRKRSRSRNW*
Ga0164298_1125783123300012955SoilVGNDSKGLCARDAAEVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRRRPRDW*
Ga0164303_1117102323300012957SoilMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRRR
Ga0164299_1029660123300012958SoilVGNDSKGLCARDAAEVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDD
Ga0164302_1028203723300012961SoilMNGWLTTAKLVPSLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRRRPRDW*
Ga0164307_1057482423300012987SoilMNTWLTTAKLVPTLGLIPLGAAVAAMFMKREPAKIRVQSTGEDDRKRRRPRDW*
Ga0164306_1047030523300012988SoilAKLVPTLGLIPLGAAVAAMFMKREPAKIRFRSTGEDDRKRSRSRDW*
Ga0164305_1013222423300012989SoilMNTWLTTAKLVPTLGLIPLGAAVVATFMQRESAKVRVRSTGEDDRKRSRSRDW*
Ga0164305_1031377123300012989SoilGNDSKGLCARDAAEVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRRRPRDW*
Ga0157374_1237088323300013296Miscanthus RhizosphereAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0163162_1217075813300013306Switchgrass RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0157375_1020737313300013308Miscanthus RhizosphereMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW*
Ga0157375_1082688123300013308Miscanthus RhizosphereMGAGVDALGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLSLRADGENARTRRRSRR*
Ga0075353_122088313300014321Natural And Restored WetlandsNQGKNDSHGLCARMHAAVDVSSMNGWLTTAKLVPTLGLIPLGAAVSASFMQRDPALVRSRRSGEGRRGRRRERT*
Ga0157377_1008930713300014745Miscanthus RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRPTGEDDRKRRRSRDW*
Ga0132258_1230598723300015371Arabidopsis RhizosphereVLCARDAAAVDAFAMNGWLSTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW*
Ga0132257_10073937623300015373Arabidopsis RhizosphereWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRSRSRDW*
Ga0190266_1047732623300017965SoilMGAGVDALGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVTGENTRTRRRSR
Ga0184611_127232413300018067Groundwater SedimentMNGWLTTANLVPTMGLIPLGAAVAAAFMQRDPARVRSRRTGEDRRDRTRGSR
Ga0173481_1020032623300019356SoilMAAGVDALGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSR
Ga0182009_1085694623300021445SoilMRAAVDVSFMNAWTTTANLVPTLGLIPLGAAVVATFMQRDPVRVRSRRAGEDRRGRRGSR
Ga0247746_110515513300022886SoilAGLCADMAAGVDTSGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSRR
Ga0209342_1007015613300025326SoilMNAWLTTAKLVPVLGLIPLGAAVSATFMQRDPARVRVTKEDTRREGRRSRRT
Ga0207692_1069152923300025898Corn, Switchgrass And Miscanthus RhizosphereLAMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRSRSRDW
Ga0207642_1047313113300025899Miscanthus RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0207710_1014791223300025900Switchgrass RhizosphereVLCARDAVAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRMPDPARHRRFIA
Ga0207688_1001242533300025901Corn, Switchgrass And Miscanthus RhizosphereVLCARDAAGVDAFAMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0207685_1000644233300025905Corn, Switchgrass And Miscanthus RhizosphereMNTWLTTAKLVPTLGLIPLGAVVAATFMQREPAKVRVRSTGEDDRKRSRSRDW
Ga0207645_1017709623300025907Miscanthus RhizosphereVLCARDAAAVDAFAMNGWLTTTKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0207707_1123207023300025912Corn RhizosphereVLCARDAVAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0207660_1159794023300025917Corn RhizosphereVLCAREAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0207657_1085506923300025919Corn RhizosphereVLCARDAVAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW
Ga0207649_1142201813300025920Corn RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW
Ga0207659_1087655323300025926Miscanthus RhizosphereMAAGVDTWGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSR
Ga0207670_1179833113300025936Switchgrass RhizosphereGVDALGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLSLRADGENARTRRRSRR
Ga0207679_1121793023300025945Corn RhizosphereMAAGVDTSGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSR
Ga0208534_101251313300026013Natural And Restored WetlandsMNAWLTTAKLVPVLGLIPLGAAVQAAFMQREPQRAPLRVSGENTRSPRRSRG
Ga0207648_1123652213300026089Miscanthus RhizosphereADVLAMNTWLTTAKLVPTLGLIPLGAAVAATFMQREPAKVRVRSTGEDDRKRSRSRDW
Ga0207676_1171849823300026095Switchgrass RhizosphereMAAGVDTSGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLSLRADGENARTRRRSR
Ga0207675_10024231823300026118Switchgrass RhizosphereVLCARDAAAVDAFAMNGWLTTAKLVPSLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW
Ga0209152_1000833833300026325SoilVLCARDRAGADAFAMNGWLTTAKLVPSLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRIRSRDW
Ga0207428_1047777023300027907Populus RhizosphereLCARDAIAVDAFAMNGWLTTTKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW
Ga0268264_1008483023300028381Switchgrass RhizosphereVLCAREAAAVDDFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRSRDW
Ga0307295_1006388123300028708SoilMGAGVDALGMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLLPLRVAGENARTRRRSRR
Ga0307309_1007537923300028714SoilVLCARDAAAVDAFAMNGWLTTAKLVPTLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRR
Ga0307311_1024907213300028716SoilMNGWLTTAKLVPTLGLIPLGAAVAATFMQREPARIRVRSTGEDDRKRRRPRDW
Ga0307317_1020032923300028720SoilMNGWLTTAKLVPSLGLIPLGAAVAATFMQRDPAKIRVRSTGEDDRKRRRPRDW
Ga0307318_1015812623300028744SoilMGAGVDALVMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLPLRVAGENARTRRRSR
Ga0307503_1003010413300028802SoilMVSGADVSDMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDRARLPLRTAGENARTRDRSR
Ga0307503_1081715513300028802SoilMGVQVDALGMNAWLTAAKLVPVLGLIPLGAAAQATFMQRDPARLPLRPVGENARTRRRSR
Ga0307289_1006344743300028875SoilMGAGVDALVMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLLPLRVAGENA
Ga0307300_1002429513300028880SoilMGAGVDALVMNAWLTTAKLVPVLGLIPLGAAVQATFMQRDPARLLPLRVPGENARTRRRSRR
Ga0247827_1019312923300028889SoilVLCARDATAVDAFAMNGWLSTTKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0247826_1061251423300030336SoilVLCARDATAVDAFAMNGWLTTTKLVPTLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRSRDW
Ga0307497_1005678923300031226SoilMGAEVDALGMNGWLTAAKLVPVLGLIPLGAAAQATFMQRDPARLPLRVVGENARTRRRSR
Ga0307506_1007620123300031366SoilMNGWLTTAKLVPSLGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRRRPRDW
Ga0310886_1102959713300031562SoilMGAGVDALGMNTRLTTAKLVPVLGLIPLGAAAQATFMQRDPARLPLRAAGENARTRRRSR
Ga0307468_10099143123300031740Hardwood Forest SoilMNGWLTTAKLVPSLGLIPLGAAVAASFMQREPARIRVRSTGEDDRKRRRPRDW
Ga0315290_1005784563300031834SedimentMNAWLSTAKLVPVLGLIPLGAAVQATFMQRDPARIPARAARADARTRRRTRG
Ga0308175_10018630923300031938SoilMGLCARESRGADVLAMNTWLTTAKLVPALGLIPLGAAVAATFMQREPAKIRVRSTGEDDRKRSRSRDW
Ga0326597_1096863213300031965SoilMNAWLTTAKLVPVLGLIPLGAAVSATFMQRDPARVRVTKEDTRRDGRRSRRT
Ga0315281_1206635413300032163SedimentMNAWLSTAKLVPVLGLIPLGAAVQATFMQRDPARIPARAARADARARRRTRG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.