Metagenome Family F063112

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063112
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	71 residues
Representative Sequence	QSQEVAARSYDVELKALTKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQALKELEANK
Number of Associated Samples	117
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.77 %
% of genes near scaffold ends (potentially truncated)	97.69 %
% of genes from short scaffolds (< 2000 bps)	93.85 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (78.462 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (22.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.11% β-sheet: 0.00% Coil/Unstructured: 48.89%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF09084	NMT1	17.69
PF13379	NMT1_2	4.62
PF07969	Amidohydro_3	4.62
PF03401	TctC	3.85
PF00449	Urease_alpha	3.08
PF04909	Amidohydro_2	2.31
PF01797	Y1_Tnp	2.31
PF08309	LVIVD	1.54
PF13751	DDE_Tnp_1_6	1.54
PF09587	PGA_cap	1.54
PF02353	CMAS	0.77
PF08482	HrpB_C	0.77
PF13594	Obsolete Pfam Family	0.77
PF01717	Meth_synt_2	0.77
PF07908	Obsolete Pfam Family	0.77
PF00211	Guanylate_cyc	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	17.69
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	17.69
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.85
COG0804	Urease alpha subunit	Amino acid transport and metabolism [E]	3.08
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	2.31
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	1.54
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.77
COG1643	HrpA-like RNA helicase	Translation, ribosomal structure and biogenesis [J]	0.77
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.77
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.77
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.77
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.77 %
Unclassified	root	N/A	21.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.54 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	58.46 %
Unclassified	root	N/A	21.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	58.46 %
Unclassified	root	N/A	21.54 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	56.15 %
Unclassified	root	N/A	21.54 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.54 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	1.54 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	56.15 %
Unclassified	root	N/A	21.54 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.54 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.54 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.77 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	56.15 %
Unclassified	root	N/A	21.54 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.54 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.54 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2029527005\|ACOFG987_F36MELC01EQZFQ	Not Available	546	Open in IMG/M
2228664022\|INPgaii200_c1046955	Not Available	804	Open in IMG/M
3300000559\|F14TC_101599898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1017707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1139	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1020113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1258	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10080445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1065666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300001431\|F14TB_101428798	Not Available	639	Open in IMG/M
3300003373\|JGI25407J50210_10084060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	790	Open in IMG/M
3300003997\|Ga0055466_10085784	Not Available	838	Open in IMG/M
3300004019\|Ga0055439_10259575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300004281\|Ga0066397_10048659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	757	Open in IMG/M
3300005171\|Ga0066677_10714693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300005178\|Ga0066688_10016792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3778	Open in IMG/M
3300005180\|Ga0066685_11063242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300005187\|Ga0066675_10096977	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300005340\|Ga0070689_101313687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	652	Open in IMG/M
3300005445\|Ga0070708_100369715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1352	Open in IMG/M
3300005446\|Ga0066686_10033138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3036	Open in IMG/M
3300005446\|Ga0066686_10778878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300005518\|Ga0070699_100991407	Not Available	770	Open in IMG/M
3300005540\|Ga0066697_10737314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300005556\|Ga0066707_10035598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2796	Open in IMG/M
3300005598\|Ga0066706_10218127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1473	Open in IMG/M
3300005615\|Ga0070702_100427145	Not Available	955	Open in IMG/M
3300005764\|Ga0066903_101670477	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005844\|Ga0068862_101981616	Not Available	593	Open in IMG/M
3300005876\|Ga0075300_1045783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	621	Open in IMG/M
3300006034\|Ga0066656_10151193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1451	Open in IMG/M
3300006058\|Ga0075432_10607270	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006163\|Ga0070715_10630081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300006173\|Ga0070716_100252895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1201	Open in IMG/M
3300006845\|Ga0075421_100567190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1339	Open in IMG/M
3300006846\|Ga0075430_101105379	Not Available	653	Open in IMG/M
3300006871\|Ga0075434_100279929	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300006871\|Ga0075434_102165798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	560	Open in IMG/M
3300006880\|Ga0075429_101886997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300006914\|Ga0075436_100100235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2017	Open in IMG/M
3300007255\|Ga0099791_10222719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	892	Open in IMG/M
3300009012\|Ga0066710_100488891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1853	Open in IMG/M
3300009012\|Ga0066710_104589181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300009137\|Ga0066709_104237019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300009137\|Ga0066709_104241835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300009147\|Ga0114129_11401111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	862	Open in IMG/M
3300009147\|Ga0114129_11650408	Not Available	783	Open in IMG/M
3300009168\|Ga0105104_10264365	Not Available	941	Open in IMG/M
3300009802\|Ga0105073_1032202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300009837\|Ga0105058_1020704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1378	Open in IMG/M
3300010040\|Ga0126308_10095824	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300010046\|Ga0126384_12290634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300010046\|Ga0126384_12488049	Not Available	502	Open in IMG/M
3300010166\|Ga0126306_10399998	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300010304\|Ga0134088_10209608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	934	Open in IMG/M
3300010360\|Ga0126372_11178944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300010362\|Ga0126377_10375544	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300010364\|Ga0134066_10384253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300010376\|Ga0126381_100923136	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300010399\|Ga0134127_11421849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	765	Open in IMG/M
3300011403\|Ga0137313_1043436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	769	Open in IMG/M
3300011405\|Ga0137340_1014518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1426	Open in IMG/M
3300012040\|Ga0137461_1048299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1153	Open in IMG/M
3300012081\|Ga0154003_1037246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300012198\|Ga0137364_10121340	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300012204\|Ga0137374_10124103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2368	Open in IMG/M
3300012204\|Ga0137374_10412806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1070	Open in IMG/M
3300012208\|Ga0137376_10029962	All Organisms → cellular organisms → Bacteria	4306	Open in IMG/M
3300012285\|Ga0137370_10019572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3377	Open in IMG/M
3300012477\|Ga0157336_1008499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300012493\|Ga0157355_1035289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300012582\|Ga0137358_10256852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1188	Open in IMG/M
3300012685\|Ga0137397_10303153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1190	Open in IMG/M
3300012944\|Ga0137410_11945547	Not Available	522	Open in IMG/M
3300012971\|Ga0126369_11063345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	898	Open in IMG/M
3300012972\|Ga0134077_10173094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	870	Open in IMG/M
3300013297\|Ga0157378_11206085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	796	Open in IMG/M
3300014270\|Ga0075325_1054421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	856	Open in IMG/M
3300014326\|Ga0157380_11309122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300015258\|Ga0180093_1095036	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300015357\|Ga0134072_10184486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300015359\|Ga0134085_10139831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1023	Open in IMG/M
3300015372\|Ga0132256_101826521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300015372\|Ga0132256_102633902	Not Available	603	Open in IMG/M
3300017659\|Ga0134083_10081160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1260	Open in IMG/M
3300017966\|Ga0187776_10815492	Not Available	671	Open in IMG/M
3300018028\|Ga0184608_10198593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300018028\|Ga0184608_10237518	Not Available	801	Open in IMG/M
3300018028\|Ga0184608_10368535	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300018053\|Ga0184626_10414281	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300018070\|Ga0184631_10257847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300018076\|Ga0184609_10075242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1485	Open in IMG/M
3300018076\|Ga0184609_10570240	Not Available	510	Open in IMG/M
3300018081\|Ga0184625_10187428	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300018422\|Ga0190265_12030315	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300018433\|Ga0066667_10126838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1755	Open in IMG/M
3300018481\|Ga0190271_10528695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1293	Open in IMG/M
3300018482\|Ga0066669_10162407	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300018482\|Ga0066669_12440253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300021081\|Ga0210379_10319280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	680	Open in IMG/M
3300021081\|Ga0210379_10562621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300021170\|Ga0210400_11134633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300021344\|Ga0193719_10070399	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300025903\|Ga0207680_10644700	Not Available	758	Open in IMG/M
3300025910\|Ga0207684_11299102	Not Available	599	Open in IMG/M
3300025922\|Ga0207646_11197365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300025939\|Ga0207665_10484387	Not Available	953	Open in IMG/M
3300026023\|Ga0207677_11089536	Not Available	728	Open in IMG/M
3300026324\|Ga0209470_1156550	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300026332\|Ga0209803_1058429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1677	Open in IMG/M
3300026342\|Ga0209057_1201873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300026523\|Ga0209808_1086739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1340	Open in IMG/M
3300027378\|Ga0209981_1035954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	734	Open in IMG/M
3300027552\|Ga0209982_1043113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	721	Open in IMG/M
3300027722\|Ga0209819_10001093	All Organisms → cellular organisms → Bacteria	8240	Open in IMG/M
3300027748\|Ga0209689_1196967	Not Available	888	Open in IMG/M
3300027821\|Ga0209811_10214308	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300027909\|Ga0209382_10483682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1366	Open in IMG/M
3300031720\|Ga0307469_10977142	Not Available	789	Open in IMG/M
3300031820\|Ga0307473_10072599	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300031879\|Ga0306919_10830232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300031897\|Ga0318520_10624523	Not Available	671	Open in IMG/M
3300031908\|Ga0310900_11204086	Not Available	630	Open in IMG/M
3300031946\|Ga0310910_11324668	Not Available	556	Open in IMG/M
3300031949\|Ga0214473_11463055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300031995\|Ga0307409_100572606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300032000\|Ga0310903_10473792	Not Available	650	Open in IMG/M
3300032004\|Ga0307414_11399601	Not Available	650	Open in IMG/M
3300032126\|Ga0307415_101351083	Not Available	677	Open in IMG/M
3300032174\|Ga0307470_10645459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	798	Open in IMG/M
3300032205\|Ga0307472_100711859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300034177\|Ga0364932_0293576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.15%
Plants	Host-Associated → Plants	18.46%
Aquatic	Environmental → Aquatic	13.85%
Arthropoda	Host-Associated → Arthropoda	0.77%
Fungi	Host-Associated → Fungi	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.85%
Sediment	Environmental → Aquatic → Sediment	9.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Freshwater	Environmental → Aquatic → Freshwater	3.08%
Marine	Environmental → Aquatic → Marine	1.54%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.77%
Roots	Host-Associated → Plants → Roots	0.77%
Mycelium	Host-Associated → Fungi → Mycelium	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Loam	Environmental → Terrestrial → Soil → Loam	10.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.54%
Sand	Environmental → Terrestrial → Soil → Sand	1.54%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.54%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%
Garden Dump	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Garden Dump	0.77%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.77%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.54%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.54%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Leaf Cutter Ant	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Garden Dump → Leaf Cutter Ant	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2029527005	Atta colombica fungus garden Top	Host-Associated	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACOFGT_362340	2029527005	Leaf Cutter Ant	AARSYDLELKTIRKDGQMTDAEMENFIERLGDKKRPLDEVRDFSLVRQAIKELEGSK
INPgaii200_10469552	2228664022	Soil	FIADNRQETIAVMLKSLPQGPDVASRSYDLELKAITPDGQMTDAEMDSLIERLGEKKKPLDEVRDFSPVRQAIKELAANK
F14TC_1015998982	3300000559	Soil	MIEENSQETIRILLHWVKQTPEIAARSYDSELKTIQRDGIMSDADMENFLDRLSDKKRPLDEVRDFAFARQAWKELDQNR*
AF_2010_repII_A01DRAFT_10177073	3300000580	Forest Soil	AARSYDLELKTISQDGQMTDAEMDSLIERLGEKKRPLDEVRDFSPVRQAIKELDARK*
AF_2010_repII_A100DRAFT_10201131	3300000655	Forest Soil	WLPQSQEVAGRSYDVELKALTKDGQMTDAELESLIERLGEKKRPLDEVRDFLPVRQALKELEGNK*
AF_2010_repII_A001DRAFT_100804451	3300000793	Forest Soil	TIAVMLKWLPQTADVAARSYDLELKTISQDGQMTDAEMDSLIERLGEKKRPLDEVRDFSPVRQAIKELDARK*
AP72_2010_repI_A100DRAFT_10656661	3300000837	Forest Soil	DVAARSYDLELKTISQDGQMTDAEMDSLIERLGEKKRPLDEVRDFSPVRQAIKELDARK*
F14TB_1014287982	3300001431	Soil	ETIAVMLKWLPQTADVAARSYDLELKGITPDGQMTDAEMDSLIERLGDKKRPLDEVRDFSPVRQAIKELAAV*
JGI25407J50210_100840601	3300003373	Tabebuia Heterophylla Rhizosphere	LPQTADVAARSYDLELKAITADGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAITELAASR*
Ga0055466_100857842	3300003997	Natural And Restored Wetlands	NRQETIAVMLKWLPQSQEVAGRSYDVELKGLAKDGQMTDAELDNLIDRLGEKKRPLDEVRNFNPMRQAIQELSAKP*
Ga0055439_102595752	3300004019	Natural And Restored Wetlands	ADNRAETIAVMLKWLPQTPEVAARSYDTELKALTPDGQMTDVEMDGLIERLGEKKRPLDEVRDFSPVRQAIKELNAGK*
Ga0066397_100486591	3300004281	Tropical Forest Soil	LKWLPQSREVAGRSYDVELKALTKDGQMTEAELESLIERLGEKKRPLDEVRDFLPVRQALKELEGNK*
Ga0066677_107146932	3300005171	Soil	TPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQTLKELEANK*
Ga0066688_100167925	3300005178	Soil	FITENRQETIAVMLKSLPQPQEVASRSYDLELKALAKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQASKELEGNK*
Ga0066685_110632421	3300005180	Soil	PQTADVAARSYDLELKGITPDGQMTDVEMDSLIDRLGEKKRPLDEVRDFSPVRQAIKELAANK*
Ga0066675_100969773	3300005187	Soil	TRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK*
Ga0070689_1013136871	3300005340	Switchgrass Rhizosphere	TIAVMLKWLPQTQEVAGRSYDIELKALTKDGQMTDAELESLIDRLGEKKPVLDEVRDFNPIRRAIKELDAKQ*
Ga0070708_1003697151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QSQEVAARSYDVELKALTKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQALKELEANK*
Ga0066686_100331381	3300005446	Soil	QETTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK*
Ga0066686_107788781	3300005446	Soil	ENRQETIAVMLKSLPQPQEVASRSYDLELKALSKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQALKELEGNK*
Ga0070699_1009914071	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	QSPEIASRSYDLELKTIRKDGQMTDAEMESFIDRLGDKKRPLDEVRDFSLVRQALKELEGGK*
Ga0066697_107373142	3300005540	Soil	RVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK*
Ga0066707_100355981	3300005556	Soil	IAVMLKSLPQPQEVASRSYDLELKALAKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQASKELEGNK*
Ga0066706_102181272	3300005598	Soil	SYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQTLKELEANK*
Ga0070702_1004271451	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RFIAANRQETIAVMLKWLPQTQEVAGRSYDIELKALTKDGQMTDAELESLIDRLGEKKPALDEVRDFNPIRQAIKELDTKH*
Ga0066903_1016704773	3300005764	Tropical Forest Soil	RQETIAVMLKWLPQTADVAARSYDLELKTIAQDGQMTDAELDSLIERLGEKKRPLEEVRDFSPVRQAIKELDARK*
Ga0068862_1019816161	3300005844	Switchgrass Rhizosphere	LAQTQEAAGRSYDVELKALTKDGQMTDAELEGLIDRLGEKKPALDEVRDFNPIRRAIKELDAKQ*
Ga0075300_10457832	3300005876	Rice Paddy Soil	QTPEVAGHSYDIELKALTKDGEMTDSELESLIDRLGEKKPGLNEVRDFQPVRRAIKELDAKS*
Ga0066656_101511932	3300006034	Soil	TRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQTLKELEANK*
Ga0075432_106072701	3300006058	Populus Rhizosphere	VMLKWLAQTQEVAGRSYDVELKALTKDGQMTDAELESLIDRLGEKKPALDEVRDFNPIRQAIKELDTKH*
Ga0070715_106300812	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KQSPEIASRSYDLELKTIRKDGQMTDAEMESFIDRLGDKKRPLDEVRDFSLVRQALKELEGGK*
Ga0070716_1002528951	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	NRQETIAVMLKSLPQGPDVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAANK*
Ga0075421_1005671901	3300006845	Populus Rhizosphere	KVLLQWVKQTPEIAARSYDVEIKAIQRDGTMSDGDMESFIDRLGNEKKRSVDDVRDFSFARQAWKELESGK*
Ga0075430_1011053791	3300006846	Populus Rhizosphere	TIAVMLKWLPQTADVAARSYDLELKGITPDGQMTDAEMESLIERLGEKKKALDEVRDFLPVRQAIKELGASK*
Ga0075434_1002799293	3300006871	Populus Rhizosphere	RFIADNRQETIAVMLKWLPQTAEVAARSYDLELKAITPDGQMTDAEMDSLIERLGEKKKPLDEVRDFSPVRQAIKELGASK*
Ga0075434_1021657981	3300006871	Populus Rhizosphere	SVMLKWLPQSQEIAGRSYDVELKTLTKDGQMTDAEMESLIDRLAEKKRPLDEVRDFNPVRQVIKELDAKP*
Ga0075429_1018869971	3300006880	Populus Rhizosphere	QWVKQTPEIAARSYDVELKSILRDGIMSDGDMENFLERLGNEKKKALDDVRDFSFARQVWKELEQSK*
Ga0075436_1001002354	3300006914	Populus Rhizosphere	NRQETIAVMLKWLPQSQEVAGRSYDVELKALTRDGQMTDAEMDSLIERLGEKKRPLDEVRDFSPVRQALKELEGNK*
Ga0099791_102227191	3300007255	Vadose Zone Soil	PETIRILLQWVKQTPEIAARSYDIELKSILRDGIMNDADMENFLERLGNEKKKALDDVRDFSFARQVWKELESGK*
Ga0066710_1004888915	3300009012	Grasslands Soil	IAVMLKWLPQTADVAARSYDLELKGITPDGQMTDAEMDSLIERLGDKKRPLDEVRDFSPVRQAIKELAANK
Ga0066710_1045891811	3300009012	Grasslands Soil	IDENRQETTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEVESFLERLGDKKRPLDEVRDFSLVRQALKELEANK
Ga0066709_1042370192	3300009137	Grasslands Soil	IDENRQETTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEVESFLERLGDKKRPLDEVRDFSLVRQALKELEANK*
Ga0066709_1042418352	3300009137	Grasslands Soil	TEKRQETIAVMLKSLPQPQEVASRSYDLELKALSKDGQMTDGEMESLIERLGEKKRPLDEVRDFSPVRQALKELEANK*
Ga0114129_114011111	3300009147	Populus Rhizosphere	AEVAARSYDLELKGISPDGQMTDAEMDSLIDRLGEKKRPLDEVRDFSPVRQAIKELAANK
Ga0114129_116504081	3300009147	Populus Rhizosphere	ETIAVMLKWLPQTAEVAARSYDLELKAISPDGQMTDAEMDSLIERLGEKKKPLDEVRDFSPVRQAIKELGASK*
Ga0105104_102643651	3300009168	Freshwater Sediment	AARSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQANKELGASK*
Ga0105073_10322021	3300009802	Groundwater Sand	KANRFIADNRQETIAVMLKWLPQTADVAARSYDLELKGITPNGQMTDAEMESLIERLGDKRRPLDEVRDFSPVRQAIKELAANR*
Ga0105058_10207043	3300009837	Groundwater Sand	FIADNRQETIAVMLKWLPQTADVAARSYDLELKGITPNGQMTDAEMESLIERLGEKRRPLDEVRDFSPVRQAIKELAANR*
Ga0126308_100958242	3300010040	Serpentine Soil	MRGNRFIAANRQETIAVMLKWLPQTPEVAGRSYDVELKALTKDGQMTDAELESLIDRLGDKKPALDEVRDFNPIRRAIKELDAKS*
Ga0126384_122906341	3300010046	Tropical Forest Soil	ILDNRQETIAVMLKWLPQTADVAARSYDLELKTITPDGQMTDAEMDSLIERLGEKKRPLNDVRDFSPVRQAIKELDARK*
Ga0126384_124880491	3300010046	Tropical Forest Soil	KANRFILDNRQETIAVMLKWLPQTADVAARSYDLELKTIAQDGQMTDAELDSLIERLGEKKRPLEEVRDFSPVRQAIKELDARK*
Ga0126306_103999981	3300010166	Serpentine Soil	NRQETIAVMIKWLPQTPEVAGRSYDVELKALTKDGQMTDAELESLIDRLGEKKPALGEVRDFNPIRQAIKELDTKQ*
Ga0134088_102096082	3300010304	Grasslands Soil	VMLKSLPQPQEVASRSYDLELKALAKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQASKELEGNK*
Ga0126372_111789441	3300010360	Tropical Forest Soil	EDNRQETIRVLLQWVKQSPEIAARSYDLELKTIRKDGQMSDAEMESFIERLGDKKRPLDEVRDFSLVRQAIKELEGTR*
Ga0126377_103755441	3300010362	Tropical Forest Soil	TIAVMLKWLPQTADVAARSYDLELKTITPDGQMTDAEMDSLIERLGEKKRSLDEVRDFSPVRQAIKELDVSK*
Ga0134066_103842531	3300010364	Grasslands Soil	RQETIAVMLKSLPQPQEVASRSYDLELKALSKDGQMTDSEMESLIERLGEKKRPLDEVRDFSPVRQALKELEANK*
Ga0126381_1009231363	3300010376	Tropical Forest Soil	LKWLPQTADVAARSYDLELKTIAQDGQMTDAEMDSLIERLGEKKRPLDEVRDFSPVRQAIKELDARK*
Ga0134127_114218493	3300010399	Terrestrial Soil	RILLQWVKQTPEIAARSYDVELKSILRDGIMNDADMENFLERLGNEKKKALDDVRDFSFARQVWKELESGK*
Ga0137313_10434361	3300011403	Soil	LAQTQEVAGQSYDVELKALTKDGQMTDAELESLIDRLGEKKAALDGVRDFNPIRQAIKELDTKQ*
Ga0137340_10145183	3300011405	Soil	MSKWLAQTQEVAGQSYDVELKALTKDGQMTDAELESLIDRLGEKKAALDGVRDFNPIRQAIKELDTKQ*
Ga0137461_10482993	3300012040	Soil	KQTPEIAARSYDVELKSILRDGTMTDSEMESFIDRLGNEKKRSIDEVRYFSFVRQAWKELEGGK*
Ga0154003_10372461	3300012081	Attine Ant Fungus Gardens	RSYDVELKALTRDGQMTDAELESLIDRLGEKKTALDEVRDFNPIRQAIKELDAKP*
Ga0137364_101213401	3300012198	Vadose Zone Soil	TTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK*
Ga0137374_101241031	3300012204	Vadose Zone Soil	LLHWVKQTPEIAARSYDSELKTIQRDGIMSDADMENFLDRLSDKKKSLDEVRDFSFARQAWKELERGK*
Ga0137374_104128063	3300012204	Vadose Zone Soil	QETIAVMLKWLPQTADVAARSYDLELKGITPDGQMTDAEMDSLIDRLGEKKRPLDEVRDFSPVRQAIKELTANK*
Ga0137376_100299626	3300012208	Vadose Zone Soil	YDLELKALSNDGQMTDGEMESLIAGLGEQKRPLDVVRDFSPVRQALKELEANK*
Ga0137370_100195724	3300012285	Vadose Zone Soil	IEANRQEMTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK*
Ga0157336_10084993	3300012477	Arabidopsis Rhizosphere	RILLQWVKQTPEIAGRSYDVELKSILRDGIMNDADMENFLERLGNEKKKALDDVRDFSFARQVWKELESGK*
Ga0157355_10352892	3300012493	Unplanted Soil	ETIRVLLQWVKQTPEIAARSYDVELKSILRDGIMNDADMENFLERLGNEKKKALDDVRDFSFARQVWKELEQSK*
Ga0137358_102568523	3300012582	Vadose Zone Soil	DNRQETIAVMLKSLPQGPDVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAANK*
Ga0137397_103031531	3300012685	Vadose Zone Soil	ETIRVLLQWVKQTPEIAARSYDVELKSILRDGTMTDADMEAFLDRLSDKRRSLDEVRDFSLARQAWKELEQNK*
Ga0137410_119455472	3300012944	Vadose Zone Soil	AARSYDLELKAITPDGQMTDAEMDSLIERLGEKKKPLDEVRDFSPVRQAIKELGASK*
Ga0126369_110633451	3300012971	Tropical Forest Soil	FITDNRQEAIAVMLKWLPQSQEIGARSYDVELKALTKDGQMTDAEMESLIDRLGEKRRPLDEVRDFSPVRQALKELESNK*
Ga0134077_101730941	3300012972	Grasslands Soil	ENRQETTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFIERLSDKKRPLDEVRDFSLVRQALKELEANK*
Ga0157378_112060852	3300013297	Miscanthus Rhizosphere	SLRAVVKSNRFIAANRQETIAVMLKWLPQTQEVAGRSYDIELKALTKDGQMTDAELESLIDRLGEKKPVLDEVRDFNPIRRAIKELDAKQ*
Ga0075325_10544212	3300014270	Natural And Restored Wetlands	SYEVELKALTKDGEMTDTELENLIDRLGEKKPGLDEVRDFRPIRRAIKELEAKS*
Ga0157380_113091222	3300014326	Switchgrass Rhizosphere	TIRVLLQWVKQTPEIAARSYDVELKTILRDGIMTDREMDNFLDRLTDKKRPLDEVRDFSFARQALKELEAGR*
Ga0180093_10950361	3300015258	Soil	WLPQSQEVASRSYDIELKALAKDGQMTDAEMDSLIDRLGEKKRPLDEVRDFSPMRQAIKELEAKQ*
Ga0134072_101844862	3300015357	Grasslands Soil	VASRSYDLELKALSKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQALKELEGNK*
Ga0134085_101398312	3300015359	Grasslands Soil	KSLPQPQEVASRSYDLELKALSKDGQMTDGEMESLIERLGEKKRPLDEVRDFSPVRQALKELEGNK*
Ga0132256_1018265211	3300015372	Arabidopsis Rhizosphere	NRPETIRILLQWVKQTPEIAVRSYDVELKSILRDGIMSDGDMENFLERLGNEKKKALDDVRDFSFARQVWKELESGK*
Ga0132256_1026339021	3300015372	Arabidopsis Rhizosphere	AGRSYDVELKALTKDGQMTDAELESLIDRLGEKKPALDEVRDFNPIRQAIKELDTKH*
Ga0134083_100811602	3300017659	Grasslands Soil	FITENRQETIAVMLKSLPQPQEVASRSYDLELKALAKDGQMTDAEMESLIERLGEKKRPLDEVRDFSPVRQASKELEGNK
Ga0187776_108154921	3300017966	Tropical Peatland	RSYDIELKALTPDGQMTDAEMDALIERLGDKKRPLDEVRDFSLVRQVIKELNASK
Ga0184608_101985932	3300018028	Groundwater Sediment	VLLQWVKQTPEIAGRSYDVELKSILRDGIMSDAEMENFLDRLSDKKRPLDEVRDFSFARQAWRELEQSK
Ga0184608_102375181	3300018028	Groundwater Sediment	FIADNRPDTIAVTLKWLPQTADVAARSYDLELKAITPDGQMTDAEMDSLIERLGEKKKPLDEVRDFSSVRQAIKELGANK
Ga0184608_103685351	3300018028	Groundwater Sediment	RSYDVELKALTKDGQMTDAEMESLIDRLGEKKRPLDEVRDFNPVRQAIKELEAKQ
Ga0184626_104142811	3300018053	Groundwater Sediment	VMMKWVKQPQEIAARSYDLELRTLAKDGQMSDADLESFIERLGEKKRPLDEVRDFSFARQALKELDAGR
Ga0184631_102578471	3300018070	Groundwater Sediment	RTLRAVLKANRFMSENRQETIAVMLKWLPQTQEVANRSYDVELKAIAKDGQMTDAEMESLIDRLGEKKRPLDEVRDFNPVRQAIKELEAKQ
Ga0184609_100752422	3300018076	Groundwater Sediment	LQWVKQTPEIAARSYDVELKSILRDGIMSDAEMENFLDRLSDKKRPLDEVRDFSFARQAWKELEQSK
Ga0184609_105702401	3300018076	Groundwater Sediment	YDVELKALTKDGQMTDAEMESLIDRLGEKKRPLNEVRNFNPVRQAIKELARKQ
Ga0184625_101874282	3300018081	Groundwater Sediment	ADNRPETIAVMLKWLPQTPDVAARSYDLELKAITPDGQMTDAEMDSLIERLGEKKKLLDEVRDFSPVRQAIKELGASK
Ga0190265_120303151	3300018422	Soil	KWLAQTQEVAGQSYDVELKTLTKDGQMTDAELESLIDRLGEKKAALDEVRDFNPIRQAIKELDTKQ
Ga0066667_101268381	3300018433	Grasslands Soil	PEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQTLKELEANK
Ga0190271_105286953	3300018481	Soil	RAETIKVLLQWVKQTPEIAGRSYDVELKSILRDGTMTDAEMESFIDRLGNEKKRSIDEVRDFSFVRQAWKELEGGK
Ga0066669_101624071	3300018482	Grasslands Soil	TTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFIERLSDKKRPLDEVRDFSLVRQALKELEANK
Ga0066669_124402531	3300018482	Grasslands Soil	TTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQTLKELEANK
Ga0210379_103192802	3300021081	Groundwater Sediment	ETIKVLLQWVKQTPEIAARSYDVELKTIQRDGTMTDADVENFITRLGNEKKRSVDDIRDFSFARQAWKELESGK
Ga0210379_105626212	3300021081	Groundwater Sediment	IPVMMKWVKQPQEIAARSYDLELRTLAKDGQMSDADLESFIERLGEKKRPLDEVRDFSFARQALKELDAGR
Ga0210400_111346331	3300021170	Soil	SQEVASRSYDIELKALTKDGQMTDAEMESLIERLGEKKRPLDEVRDFSLVRQALKELEAN
Ga0193719_100703992	3300021344	Soil	DLELKAITPDGQMTDAEMDSLIERLGEKKKPLDEVRDFSSVRQAIKELGANK
Ga0207680_106447001	3300025903	Switchgrass Rhizosphere	TQEVAGRSYDVELKALTKDGQMTDAELESLIDRLGEKKPALDEVRDFNPIRQAIKELDTK
Ga0207684_112991022	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIRELAANK
Ga0207646_111973652	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PEIASRSYDLELKTIRKDGQMTDAEMESFIDRLGDKKRPLDEVRDFSLVRQALKELEGGK
Ga0207665_104843872	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	NRFIADNRQETIAVMLKSLPQGPDVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAANK
Ga0207677_110895362	3300026023	Miscanthus Rhizosphere	ETIAVMLKWLPQTQEVAGRSYDIELKALTKDGQMTDAELESLIDRLGEKKPVLDEVRDFNPIRRAIKELDAKQ
Ga0209470_11565503	3300026324	Soil	ANRQETTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK
Ga0209803_10584293	3300026332	Soil	VMLKSLPQPQEVASRSYDLELKALSKDGQMTDGEMESLIERLGEKKRPLDEVRDFSPVRQALKELEGNK
Ga0209057_12018732	3300026342	Soil	ETTRVLLHWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQALKELEANK
Ga0209808_10867391	3300026523	Soil	ENRQETIRILLQWVKQTPEIAARSYDLELKTIRKDGQMTDAEMESFLERLGDKKRPLDEVRDFSLVRQTLKELEANK
Ga0209981_10359543	3300027378	Arabidopsis Thaliana Rhizosphere	NRQETIAVMLKWLPQTQEVAGQSYDVELKALTKDGQMTDAELDSLIDRLAEKKRPLDEVRDFNPIRQAIRELDRKQ
Ga0209982_10431133	3300027552	Arabidopsis Thaliana Rhizosphere	VMLKWLPQTQEVAGQSYDVELKALAKDGQMTDAEIDSLIDRLAEKKRPLDEVRDFNPIRQAIRELDRKQ
Ga0209819_1000109310	3300027722	Freshwater Sediment	TIAVMLKWLPQTADVAARSYDLELKAITPDGQMTDAEMESLIERLGEKRKPLDEVRDFSFVRQAIKELTANK
Ga0209689_11969671	3300027748	Soil	WLPQSQEVASRSYDVELKALSKDGQMTDAEMESLIDRLGEKKRPLDEVRDFFPVRQALKELEANK
Ga0209811_102143082	3300027821	Surface Soil	ILLQSVKQTPEIAGRSYDVELKSILRDGIMSDADMENFLERLGNEKKKTLDDVRDFSFARQVWKELEQSK
Ga0209382_104836821	3300027909	Populus Rhizosphere	KVLLQWVKQTPEIAARSYDVEIKAIQRDGTMSDGDMESFIDRLGNEKKRSVDDVRDFSFARQAWKELESGK
Ga0307469_109771421	3300031720	Hardwood Forest Soil	KQSPEIAGRSYDLELKTIRKDGQMTDAEMEGFIERLGDKKRPLDEVRDFSLVRQALKELEGGK
Ga0307473_100725991	3300031820	Hardwood Forest Soil	ISDNRQETIAVMLKWLPQSQEVAARSYDVELKALTKDGQMTDAEMESLIERLGEKKRPLDELRDFSPVRQALKELEANK
Ga0306919_108302322	3300031879	Soil	NRQETIAVMLKWLPQGPDVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAVNK
Ga0318520_106245232	3300031897	Soil	QGPDVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAVNK
Ga0310900_112040862	3300031908	Soil	QTADVAARSYDLELKAITPDGQMTDPEMDSLIERLGEKKKPLDEVRDFSPVRQAIKELGASK
Ga0310910_113246681	3300031946	Soil	DVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAVNK
Ga0214473_114630551	3300031949	Soil	ENRQETIAVMLKWLPQTQEVASRSYDVELKAIAKDGQMTDAEVESLIDRLGEKKRPLDEVRDFNPVRQAIKELEAKQ
Ga0307409_1005726061	3300031995	Rhizosphere	FIAANRQETIAVMLKWLPQTAEVAGRSYDVELKALTKDGQMTDAELESLIDRLGDKKSALDEVRDFNPIRRAIKELDAKS
Ga0310903_104737921	3300032000	Soil	WLPQTADVAARSYDLELKAITPDGQMTDPEMDSLIERLGEKKKSLDEVRDFSPVRQAIKELGASASK
Ga0307414_113996013	3300032004	Rhizosphere	ANRQETIAVMLKWLPQTAEVAGRSYDVELKALTKDGQMTDAELESLIDRLGDKKSALDEVRDFNPIRRAIKELDAKS
Ga0307415_1013510832	3300032126	Rhizosphere	AVMLKWLPQTAEVAGRSYDVELKALTKDGQMTDAELESLIDRLGDKKSALDEVRDFNPIRRAIKELDAKS
Ga0307470_106454591	3300032174	Hardwood Forest Soil	KENPQVVKRTLRALMRANRFIADNRQETIAVMLKSLPQGPDVASRSYDLELKAITPDGQMTDAEMESLIERLGEKKKPLDEVRDFSPVRQAIKELAANK
Ga0307472_1007118592	3300032205	Hardwood Forest Soil	KANRFISNNRQETIAVMLKWLPQSQEVAARSYDVELKALTKDGQMTDAEMESLIERLGEKKRPLDELRDFSPVRQALKELEANK
Ga0364932_0293576_356_613	3300034177	Sediment	LRANRFIEVYRQETIPVMMKWVKQPQEIAARSYDLELRTLAKDGQMSDADLESFIERLGEKKRPLDEVRDFSFARQALKELDAGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063112

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences