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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F063081 |
| Family Type | Metagenome |
| Number of Sequences | 130 |
| Average Sequence Length | 47 residues |
| Representative Sequence | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQ |
| Number of Associated Samples | 107 |
| Number of Associated Scaffolds | 130 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 82.31 % |
| % of genes near scaffold ends (potentially truncated) | 99.23 % |
| % of genes from short scaffolds (< 2000 bps) | 96.15 % |
| Associated GOLD sequencing projects | 88 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (90.769 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (26.154 % of family members) |
| Environment Ontology (ENVO) | Unclassified (74.615 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (80.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 130 Family Scaffolds |
|---|---|---|
| PF01555 | N6_N4_Mtase | 1.54 |
| PF05063 | MT-A70 | 1.54 |
| PF13759 | 2OG-FeII_Oxy_5 | 1.54 |
| PF00145 | DNA_methylase | 0.77 |
| PF01507 | PAPS_reduct | 0.77 |
| PF06114 | Peptidase_M78 | 0.77 |
| COG ID | Name | Functional Category | % Frequency in 130 Family Scaffolds |
|---|---|---|---|
| COG4725 | N6-adenosine-specific RNA methylase IME4 | Translation, ribosomal structure and biogenesis [J] | 3.08 |
| COG0863 | DNA modification methylase | Replication, recombination and repair [L] | 1.54 |
| COG1041 | tRNA G10 N-methylase Trm11 | Translation, ribosomal structure and biogenesis [J] | 1.54 |
| COG2189 | Adenine specific DNA methylase Mod | Replication, recombination and repair [L] | 1.54 |
| COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 0.77 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 90.77 % |
| All Organisms | root | All Organisms | 8.46 % |
| unclassified Hyphomonas | no rank | unclassified Hyphomonas | 0.77 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 26.15% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 16.92% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 11.54% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 10.77% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 6.15% |
| Saline Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water | 6.15% |
| Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 3.08% |
| Saline Lake | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake | 3.08% |
| Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 2.31% |
| Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 2.31% |
| Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 1.54% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 1.54% |
| Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 1.54% |
| Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.77% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.77% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.77% |
| Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.77% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.77% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 0.77% |
| Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 0.77% |
| Saline Lake | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake | 0.77% |
| Water | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water | 0.77% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000101 | Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010 | Environmental | Open in IMG/M |
| 3300000115 | Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011 | Environmental | Open in IMG/M |
| 3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
| 3300005086 | Microbial Community from Halfdan Field MHDA3 | Environmental | Open in IMG/M |
| 3300005837 | Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18 | Environmental | Open in IMG/M |
| 3300005931 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 | Environmental | Open in IMG/M |
| 3300005933 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE | Environmental | Open in IMG/M |
| 3300006029 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006164 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA | Environmental | Open in IMG/M |
| 3300006190 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA | Environmental | Open in IMG/M |
| 3300006191 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA | Environmental | Open in IMG/M |
| 3300006193 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA | Environmental | Open in IMG/M |
| 3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
| 3300006749 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG | Environmental | Open in IMG/M |
| 3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
| 3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
| 3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
| 3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
| 3300006928 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG | Environmental | Open in IMG/M |
| 3300006947 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA | Environmental | Open in IMG/M |
| 3300007229 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA | Environmental | Open in IMG/M |
| 3300007345 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 | Environmental | Open in IMG/M |
| 3300007346 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 | Environmental | Open in IMG/M |
| 3300007539 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG | Environmental | Open in IMG/M |
| 3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
| 3300007640 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 | Environmental | Open in IMG/M |
| 3300008012 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA | Environmental | Open in IMG/M |
| 3300008218 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 | Environmental | Open in IMG/M |
| 3300008221 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 | Environmental | Open in IMG/M |
| 3300009149 | Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG | Environmental | Open in IMG/M |
| 3300009409 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 | Environmental | Open in IMG/M |
| 3300009420 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 | Environmental | Open in IMG/M |
| 3300009481 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG | Environmental | Open in IMG/M |
| 3300009550 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome | Environmental | Open in IMG/M |
| 3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
| 3300009605 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 | Environmental | Open in IMG/M |
| 3300009790 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome | Environmental | Open in IMG/M |
| 3300010148 | Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG | Environmental | Open in IMG/M |
| 3300010149 | Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG | Environmental | Open in IMG/M |
| 3300010300 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA | Environmental | Open in IMG/M |
| 3300011253 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate | Environmental | Open in IMG/M |
| 3300012920 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG | Environmental | Open in IMG/M |
| 3300012936 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG | Environmental | Open in IMG/M |
| 3300012954 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG | Environmental | Open in IMG/M |
| 3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
| 3300017713 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 | Environmental | Open in IMG/M |
| 3300017720 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 | Environmental | Open in IMG/M |
| 3300017738 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12 | Environmental | Open in IMG/M |
| 3300017743 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17 | Environmental | Open in IMG/M |
| 3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
| 3300017748 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21 | Environmental | Open in IMG/M |
| 3300017749 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 | Environmental | Open in IMG/M |
| 3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
| 3300017765 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28 | Environmental | Open in IMG/M |
| 3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
| 3300017771 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13 | Environmental | Open in IMG/M |
| 3300017773 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24 | Environmental | Open in IMG/M |
| 3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
| 3300017779 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16 | Environmental | Open in IMG/M |
| 3300017985 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300019938 | Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW8Nov16_MG | Environmental | Open in IMG/M |
| 3300020281 | Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116) | Environmental | Open in IMG/M |
| 3300020403 | Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145) | Environmental | Open in IMG/M |
| 3300020414 | Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028) | Environmental | Open in IMG/M |
| 3300020417 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082) | Environmental | Open in IMG/M |
| 3300020421 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007) | Environmental | Open in IMG/M |
| 3300021347 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266 | Environmental | Open in IMG/M |
| 3300021378 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131 | Environmental | Open in IMG/M |
| 3300022065 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2) | Environmental | Open in IMG/M |
| 3300022068 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2) | Environmental | Open in IMG/M |
| 3300022072 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3) | Environmental | Open in IMG/M |
| 3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
| 3300022200 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3) | Environmental | Open in IMG/M |
| 3300022825 | Saline water microbial communities from Ace Lake, Antarctica - #730 | Environmental | Open in IMG/M |
| 3300022837 | Saline water microbial communities from Ace Lake, Antarctica - #1699 | Environmental | Open in IMG/M |
| 3300022839 | Saline water microbial communities from Ace Lake, Antarctica - #337 | Environmental | Open in IMG/M |
| 3300022843 | Saline water microbial communities from Ace Lake, Antarctica - #5 | Environmental | Open in IMG/M |
| 3300022851 | Saline water microbial communities from Ace Lake, Antarctica - #1237 | Environmental | Open in IMG/M |
| 3300023235 | Saline water microbial communities from Ace Lake, Antarctica - #50 | Environmental | Open in IMG/M |
| 3300023245 | Saline water microbial communities from Ace Lake, Antarctica - #423 | Environmental | Open in IMG/M |
| 3300024261 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MG | Environmental | Open in IMG/M |
| 3300024262 | Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025048 | Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes) | Environmental | Open in IMG/M |
| 3300025071 | Marine viral communities from the Pacific Ocean - LP-36 (SPAdes) | Environmental | Open in IMG/M |
| 3300025079 | Marine viral communities from the Pacific Ocean - LP-48 (SPAdes) | Environmental | Open in IMG/M |
| 3300025101 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025110 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
| 3300025138 | Marine viral communities from the Pacific Ocean - LP-40 (SPAdes) | Environmental | Open in IMG/M |
| 3300025438 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes) | Environmental | Open in IMG/M |
| 3300025502 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ (SPAdes) | Environmental | Open in IMG/M |
| 3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
| 3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
| 3300025674 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025759 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes) | Environmental | Open in IMG/M |
| 3300025769 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes) | Environmental | Open in IMG/M |
| 3300025853 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes) | Environmental | Open in IMG/M |
| 3300027668 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027704 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027714 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027813 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes) | Environmental | Open in IMG/M |
| 3300029318 | Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289 | Environmental | Open in IMG/M |
| 3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
| 3300033742 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater | Environmental | Open in IMG/M |
| 3300034375 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4) | Environmental | Open in IMG/M |
| 3300034418 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOSum2010_100477941 | 3300000101 | Marine | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQKNHDWSKKLVGHV |
| DelMOSum2010_101274381 | 3300000101 | Marine | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLK |
| DelMOSum2011_100789681 | 3300000115 | Marine | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQ |
| DelMOSum2011_100897733 | 3300000115 | Marine | VVFNMSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQI |
| DelMOSum2011_101459621 | 3300000115 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDW |
| DelMOSum2011_101961292 | 3300000115 | Marine | MSEKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIR |
| DelMOWin2010_100749671 | 3300000117 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDK |
| DelMOWin2010_102289202 | 3300000117 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQD |
| Ga0072334_106858892 | 3300005086 | Water | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQKNHDW |
| Ga0078893_118372634 | 3300005837 | Marine Surface Water | MSDKINFKLFKPFGSTLAKATLPLELLKDFKEDLKK |
| Ga0075119_10430411 | 3300005931 | Saline Lake | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAKNHDW |
| Ga0075119_11046342 | 3300005931 | Saline Lake | MNDKINFKLFKPFGSTLAKSVLPLDLIKEFQEDLKQIRED |
| Ga0075118_101681821 | 3300005933 | Saline Lake | VSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQI |
| Ga0075466_10618713 | 3300006029 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQ |
| Ga0075466_10731953 | 3300006029 | Aqueous | VSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQI |
| Ga0075441_100983103 | 3300006164 | Marine | VVSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKLVGHTTA |
| Ga0075446_101603621 | 3300006190 | Marine | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIR |
| Ga0075447_103083242 | 3300006191 | Marine | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKK |
| Ga0075445_100955393 | 3300006193 | Marine | VSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKLVGHT |
| Ga0098037_10786271 | 3300006737 | Marine | MSDKINFKLFKPFGSTLAKAVMPLELMKDFQNDLKQIRQDKEKQKNHDWSKKLVGHV |
| Ga0098042_10533751 | 3300006749 | Marine | MSDKINFKLFKPFGSTVAKAVMPLELIKDFNNDLKEI |
| Ga0098048_10788322 | 3300006752 | Marine | MSDKINFKLFKPFGSTLAKAVMPLELMKDFQNDLKQIRQDKEK |
| Ga0070750_100928743 | 3300006916 | Aqueous | VSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQDKE |
| Ga0070750_101658162 | 3300006916 | Aqueous | MNVRVCVVSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQ |
| Ga0070746_101582383 | 3300006919 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQK |
| Ga0070746_104367172 | 3300006919 | Aqueous | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQ |
| Ga0070748_11850821 | 3300006920 | Aqueous | MSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKK |
| Ga0098041_11884182 | 3300006928 | Marine | MKDKINFKIFKPFGSSMARAELPLELLKDFKEDLK |
| Ga0075444_103956432 | 3300006947 | Marine | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDK |
| Ga0075468_100670901 | 3300007229 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQKNHDWS |
| Ga0075468_102062901 | 3300007229 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKLV |
| Ga0070752_11389831 | 3300007345 | Aqueous | MNVLEFVVSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKLVG |
| Ga0070752_13844361 | 3300007345 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQDDLKQIRQDKEKQKNHDWSKKLVGH |
| Ga0070753_13465632 | 3300007346 | Aqueous | VSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIREDKEKQKNHDWSKKLVG |
| Ga0099849_11515241 | 3300007539 | Aqueous | MKDKINFKLFKPFGSTIAKAELPIELFKDFNQDLKTIR |
| Ga0099847_10165457 | 3300007540 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQKNHDWSKK |
| Ga0070751_11271601 | 3300007640 | Aqueous | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQKNHDWSKKL |
| Ga0075480_102278501 | 3300008012 | Aqueous | MSEKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEK |
| Ga0114904_10081091 | 3300008218 | Deep Ocean | LTNKINFKLLKPFGSTLAKAELPLQLVSEFLKDLKQ |
| Ga0114916_10735394 | 3300008221 | Deep Ocean | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKDKQ |
| Ga0114918_103887411 | 3300009149 | Deep Subsurface | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQDDLKQIRQDKEKQKNHDWSKK |
| Ga0114993_104894463 | 3300009409 | Marine | VSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAKNHDWGNQLIGQVHGEYLITP |
| Ga0114994_105701632 | 3300009420 | Marine | MTDKINFKLFKPFGSTIAKSELPLDLMKEFQKDLKQIREEKKK* |
| Ga0114932_100617341 | 3300009481 | Deep Subsurface | LTDKINFKLLKPFGSTLAKAELPLQLVSDFLKDLKQIREDKEKSKTHDFSNNLVG |
| Ga0115013_109743381 | 3300009550 | Marine | MKDKINFKIFKPFGSSMARAELPLELLKDFKEDLKKIRADKKKQKDHDWGERLVG |
| Ga0115011_115979731 | 3300009593 | Marine | LTDKINFKLLKPFGSTLAKAELPLQLVSDFLKDLKQIRED |
| Ga0114906_11859822 | 3300009605 | Deep Ocean | LTNKINFKLLKPFGSTLAKAELTLKLVSEFLKDLKEIRGDKEKSTTHDFG |
| Ga0115012_106210423 | 3300009790 | Marine | MSDKINFKLFKPFGSTLAKATLPLELLKDFKEDLKKIREDKQKQKD |
| Ga0098043_10959912 | 3300010148 | Marine | VYNKINFKLFKPFGSTLAKAVMPLELMKDFQNDLKQIRQDK |
| Ga0098049_12161212 | 3300010149 | Marine | MTKKINFEMFKPFGSTIAKAVLPLELLTDFLKDLEQIRSDK |
| Ga0129351_12467351 | 3300010300 | Freshwater To Marine Saline Gradient | VSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIREDKEKQKNHDWSKKL |
| Ga0151671_10514134 | 3300011253 | Marine | KLFKPFGSTLAKATLPLELLKDFKEDLKKIRADKQKQKDHDWGERLVGACSRKNI* |
| Ga0160423_109215362 | 3300012920 | Surface Seawater | MKDKINFKIFKPFGSSMARAELPLELIKDFKEDLKKIRADKKKQ |
| Ga0163109_101987581 | 3300012936 | Surface Seawater | VSDKINFKLFKPFGSTLAKATLPLELLKDFKADLKKIREDKQKQKDHDWSQRLVGAVKEEYL |
| Ga0163111_102507711 | 3300012954 | Surface Seawater | VSDKINFKLFKPFGSTLAKATLPLGLLKDFKEDLKKIREDKQKQKDHDWSQRLV |
| Ga0181403_10755862 | 3300017710 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSRKL |
| Ga0181391_11202072 | 3300017713 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKE |
| Ga0181383_10715631 | 3300017720 | Seawater | LTDKINFKLLKPFGSTLAKAELPLQLVSDFLKDLKQIREDKEKSKTHDFSNN |
| Ga0181428_10675683 | 3300017738 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLGLMKDVQDDLKQIRQDKEKQK |
| Ga0181402_10415921 | 3300017743 | Seawater | MNVTEFVGFNMSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQK |
| Ga0181389_11922841 | 3300017746 | Seawater | MSDKINFKLFKPFGSTLAKAVMPLELMKDFQNDLKQIRQDKQKQKNHDWSRKLVGHVDSEYLI |
| Ga0181393_10548951 | 3300017748 | Seawater | MSDKINFKLFKPFGSTLAKAVMPLELMKDFQNDLKQIRQDK |
| Ga0181392_10313534 | 3300017749 | Seawater | MSDKINFKLFKPFGSTLAKAVMPLELMKDFQNDLKQIRQDKQKQKNHDWSRKLVGHV |
| Ga0181405_10430133 | 3300017750 | Seawater | MSDKINFKLFKPFGSTLAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSK |
| Ga0181413_11720282 | 3300017765 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLGLMKDLQDDLKQIRQDKDKQ |
| Ga0181406_10443733 | 3300017767 | Seawater | MNVTEFVGFNMSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDW |
| Ga0181425_11348171 | 3300017771 | Seawater | MSDKINFKLFKPFGSTIAKAVMPLELMKDFQNDLKQIRQDKEKQKNHDWSKKLVGHV |
| Ga0181386_10815664 | 3300017773 | Seawater | MKNKINFKIFKPFGSSMARAELPLELLKDFKEDLK |
| Ga0181394_12605801 | 3300017776 | Seawater | MKDKINFKLFKPFGSTLAKATMPLELIKDFKDDLKKIRNDKKKQKDHD |
| Ga0181395_11707372 | 3300017779 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQKNHDWSKKLV |
| Ga0181576_109012181 | 3300017985 | Salt Marsh | VVSDKINFKLFKPFGSTLAKATLPLELLKDFKEDLKKIRE |
| Ga0194032_10281312 | 3300019938 | Freshwater | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKE |
| Ga0211483_100317585 | 3300020281 | Marine | MSKINFKLFKPFGSTMAKAELPNELIKDFLKDLNDIRQDPKNQ |
| Ga0211532_100949071 | 3300020403 | Marine | MKDKINFKIFKPFGSSMARAELPLELIKDFKEDLKKIRADKTKQKN |
| Ga0211523_104100172 | 3300020414 | Marine | MKDKINFKLFKPFGSTLAKATLPLELIKDFKEDLQQIRKDEKKKVQHDWGKRLVG |
| Ga0211528_101867751 | 3300020417 | Marine | MSDKINFKLFKPFGSTLAKATLPLELLKDFKEDLKKIRED |
| Ga0211653_100869371 | 3300020421 | Marine | MKDKINFKIFKPFGSSMARAELPLELLKDFKEDLKKIR |
| Ga0213862_100534311 | 3300021347 | Seawater | MKDKINFKIFKPFGSSMARAELPLELLKDFKEDLKKIRA |
| Ga0213861_103934062 | 3300021378 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQKNH |
| Ga0212024_10871581 | 3300022065 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKE |
| Ga0212021_11351971 | 3300022068 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQ |
| Ga0196889_10587391 | 3300022072 | Aqueous | MNVRVCVVSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLK |
| Ga0196887_10421174 | 3300022178 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKN |
| Ga0196887_10886953 | 3300022178 | Aqueous | MSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQD |
| Ga0196901_11820951 | 3300022200 | Aqueous | MKDKINFKLFKPFGSTIAKAELPIELFKDFNQDLKTIRASKELSK |
| Ga0222669_10363813 | 3300022825 | Saline Water | VSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKD |
| Ga0222711_10077265 | 3300022837 | Saline Water | MTDKINFKLFKPFGSTLAKSVLPLNLMKEFQEDLKQIREDKDKAKNHDWGNQLIGQVH |
| Ga0222711_10095524 | 3300022837 | Saline Water | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAKNHDWGNQLIGQVH |
| Ga0222649_10039156 | 3300022839 | Saline Water | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAKNHD |
| Ga0222631_10158493 | 3300022843 | Saline Water | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAKNHDWGN |
| Ga0222691_10269491 | 3300022851 | Saline Water | VSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAKNHDWGN |
| Ga0222634_10273841 | 3300023235 | Saline Water | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDK |
| Ga0222655_10365572 | 3300023245 | Saline Water | MNDKINFKLFKPFGSTLAKSVLPLDLIKEFQEDLKQIREDKDKI |
| (restricted) Ga0233439_100956151 | 3300024261 | Seawater | MSDKINFKLFKPFGSTVAKAVMPLELIKDFSNDLKEIRE |
| Ga0210003_11110495 | 3300024262 | Deep Subsurface | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQKNH |
| Ga0207905_10230213 | 3300025048 | Marine | MNVRVCVVSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIR |
| Ga0207896_10185661 | 3300025071 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRED |
| Ga0207890_10208243 | 3300025079 | Marine | MNVRVCVVSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKE |
| Ga0208159_10350011 | 3300025101 | Marine | MFNLNDKINFKLFKPFGSTLAKATLPLELLQDFKEDLKKIRKDKQKQKDHDWSQRLVGAVKEE |
| Ga0208159_10604701 | 3300025101 | Marine | MKDKINFKLFKPFGSTVAKAVMPLELIKDFNNDLKEI |
| Ga0208159_10733322 | 3300025101 | Marine | MSDKINFKLFKPFGSTLAKATLPLELLKDFKVDLKKIREDKQKQKDHDWSQRLVGAVK |
| Ga0208158_10400473 | 3300025110 | Marine | MSDKINFKLFKPFGSTLAKATLPLELLKDFKEDLKKIRKDKQK |
| Ga0208158_11195931 | 3300025110 | Marine | MFNLNDKINFKLFKPFGSTLAKATLPLELLQDFKEDLKKIRKDKQKQKDHDWSQRLVGA |
| Ga0209336_100443941 | 3300025137 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQI |
| Ga0209634_12191933 | 3300025138 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIR |
| Ga0208770_10340703 | 3300025438 | Saline Lake | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKVKNHDW |
| Ga0208903_10749361 | 3300025502 | Saline Lake | MNDKINFKLFKPFGSTLAKSVLPLDLIKEFQEDLKQIR |
| Ga0208148_10469561 | 3300025508 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQDKEKQKN |
| Ga0208148_11227783 | 3300025508 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQ |
| Ga0208643_10636753 | 3300025645 | Aqueous | MNVRVCVVSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIREDKEKQKNHDWSKKL |
| Ga0208134_11034451 | 3300025652 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKLVGH |
| Ga0208162_10392105 | 3300025674 | Aqueous | MKDKINFKLFKPFGSTIAKAELPIELFKDFNQDLKT |
| Ga0208899_11101921 | 3300025759 | Aqueous | MNVRVCVVSDKINFKLFKPFGSTVAKAIMPLGLMKD |
| Ga0208767_11082421 | 3300025769 | Aqueous | MNVRVCVVSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKL |
| Ga0208767_11251201 | 3300025769 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQI |
| Ga0208767_12170962 | 3300025769 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLK |
| Ga0208645_11188611 | 3300025853 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLELMKDFQNDLKQIRQ |
| Ga0209482_10745183 | 3300027668 | Marine | VSDKINFKLFKPFGSTVAKAIMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKL |
| Ga0209816_10685151 | 3300027704 | Marine | VSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKDKQK |
| Ga0209815_11735251 | 3300027714 | Marine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNHDWSKKL |
| Ga0209090_101749181 | 3300027813 | Marine | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKAH |
| Ga0185543_10577581 | 3300029318 | Marine | MSDKINFKLFKPFGSTLAKATLPLELLKDFKEDLKKIREDKQKQKDHDWSQRLVGAVKEEYL |
| Ga0307488_102099533 | 3300031519 | Sackhole Brine | VVSDKINFKLFKPFGSTIAKSVLPLNLMKEFQEDLKQIREDKDKVKNHD |
| Ga0307488_103313121 | 3300031519 | Sackhole Brine | MNVRVCVVSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKK |
| Ga0314858_051396_1_177 | 3300033742 | Sea-Ice Brine | VVSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQKNHDWSKKLVGHAF |
| Ga0314858_057011_764_955 | 3300033742 | Sea-Ice Brine | VSDKINFKLFKPFGSTIAKSVLPLNLMKEFQDDLKQIREDKDKAKNHDWGNQLIGQVHGEYLIT |
| Ga0314858_071393_725_862 | 3300033742 | Sea-Ice Brine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQKN |
| Ga0314858_201563_3_134 | 3300033742 | Sea-Ice Brine | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIREDKEKQ |
| Ga0348336_092071_895_1056 | 3300034375 | Aqueous | MNVLEFVVSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQKNH |
| Ga0348337_139060_575_706 | 3300034418 | Aqueous | MSDKINFKLFKPFGSTVAKAVMPLGLMKDFQDDLKQIRQDKEKQ |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |