Metagenome / Metatranscriptome Family F063056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	88 residues
Representative Sequence	VSYVGREVFQTRIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Number of Associated Samples	80
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.69 %
% of genes near scaffold ends (potentially truncated)	37.69 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (42.308 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.97% β-sheet: 18.97% Coil/Unstructured: 62.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01152	Bac_globin	10.00
PF01555	N6_N4_Mtase	8.46
PF01274	Malate_synthase	6.92
PF01699	Na_Ca_ex	4.62
PF08241	Methyltransf_11	3.85
PF00211	Guanylate_cyc	3.08
PF07883	Cupin_2	3.08
PF12867	DinB_2	1.54
PF00296	Bac_luciferase	1.54
PF00313	CSD	1.54
PF13659	Obsolete Pfam Family	1.54
PF00903	Glyoxalase	1.54
PF03795	YCII	0.77
PF04120	Iron_permease	0.77
PF04075	F420H2_quin_red	0.77
PF01243	Putative_PNPOx	0.77
PF13545	HTH_Crp_2	0.77
PF07676	PD40	0.77
PF01872	RibD_C	0.77
PF14026	DUF4242	0.77
PF02401	LYTB	0.77
PF01433	Peptidase_M1	0.77
PF13365	Trypsin_2	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	10.00
COG0863	DNA modification methylase	Replication, recombination and repair [L]	8.46
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	8.46
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	8.46
COG2225	Malate synthase	Energy production and conversion [C]	6.92
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	4.62
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	4.62
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.08
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.54
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.54
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.77
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.77
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.77
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	69.23 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	68.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.62 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.46 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.77 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.46 %
Filomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium	0.77 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.46 %
Candidatus Filomicrobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	0.77 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Unclassified	root	N/A	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11809233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300000956\|JGI10216J12902_102368784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3203	Open in IMG/M
3300004114\|Ga0062593_100962299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	871	Open in IMG/M
3300004156\|Ga0062589_100261001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1307	Open in IMG/M
3300004156\|Ga0062589_100384168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1132	Open in IMG/M
3300004156\|Ga0062589_100877929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	823	Open in IMG/M
3300004156\|Ga0062589_101087935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	755	Open in IMG/M
3300004463\|Ga0063356_100061498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3852	Open in IMG/M
3300004463\|Ga0063356_100094532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3217	Open in IMG/M
3300004463\|Ga0063356_100520546	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300004463\|Ga0063356_101242272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1085	Open in IMG/M
3300004463\|Ga0063356_102566311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	782	Open in IMG/M
3300004463\|Ga0063356_102974477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	730	Open in IMG/M
3300004463\|Ga0063356_103744616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300004463\|Ga0063356_106425339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300004480\|Ga0062592_100198694	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300004480\|Ga0062592_101200443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	709	Open in IMG/M
3300004480\|Ga0062592_101786757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300004480\|Ga0062592_102290723	Not Available	540	Open in IMG/M
3300004643\|Ga0062591_100339919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1206	Open in IMG/M
3300005045\|Ga0071328_133501	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300005093\|Ga0062594_100974619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	812	Open in IMG/M
3300005093\|Ga0062594_101414762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300005093\|Ga0062594_102045993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300005356\|Ga0070674_100374125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1157	Open in IMG/M
3300005840\|Ga0068870_11333578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300006169\|Ga0082029_1650623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	875	Open in IMG/M
3300006876\|Ga0079217_10105079	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1278	Open in IMG/M
3300006876\|Ga0079217_10267520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	924	Open in IMG/M
3300006894\|Ga0079215_11501059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300006918\|Ga0079216_10675885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	730	Open in IMG/M
3300007004\|Ga0079218_12490416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M
3300007004\|Ga0079218_12960265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300011332\|Ga0126317_10543376	All Organisms → cellular organisms → Bacteria → Terrabacteria group	998	Open in IMG/M
3300011400\|Ga0137312_1066274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300012045\|Ga0136623_10011607	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300012094\|Ga0136638_10480960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300012185\|Ga0136619_10002438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7302	Open in IMG/M
3300012530\|Ga0136635_10130092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	820	Open in IMG/M
3300012680\|Ga0136612_10000183	All Organisms → cellular organisms → Bacteria	18711	Open in IMG/M
3300012682\|Ga0136611_10407837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	873	Open in IMG/M
3300012891\|Ga0157305_10217068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300012892\|Ga0157294_10010333	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300012902\|Ga0157291_10131866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300012907\|Ga0157283_10054389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300012908\|Ga0157286_10227804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300012910\|Ga0157308_10186707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	690	Open in IMG/M
3300012910\|Ga0157308_10436308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300012912\|Ga0157306_10152635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	731	Open in IMG/M
3300012913\|Ga0157298_10105235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	772	Open in IMG/M
3300012914\|Ga0157297_10148881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300012915\|Ga0157302_10074908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1013	Open in IMG/M
3300014271\|Ga0075326_1095850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300014326\|Ga0157380_10650770	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300015077\|Ga0173483_10696786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300015077\|Ga0173483_10794580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300015258\|Ga0180093_1077841	All Organisms → cellular organisms → Bacteria → Terrabacteria group	787	Open in IMG/M
3300015371\|Ga0132258_12498515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300015371\|Ga0132258_13198815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1130	Open in IMG/M
3300015372\|Ga0132256_100878755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1012	Open in IMG/M
3300015372\|Ga0132256_101308062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	837	Open in IMG/M
3300015373\|Ga0132257_101886784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	769	Open in IMG/M
3300015374\|Ga0132255_102177411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	845	Open in IMG/M
3300017695\|Ga0180121_10194753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300017789\|Ga0136617_11126291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300017965\|Ga0190266_10037776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601	Open in IMG/M
3300018422\|Ga0190265_10070049	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300018422\|Ga0190265_10179550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2106	Open in IMG/M
3300018422\|Ga0190265_10689915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1143	Open in IMG/M
3300018422\|Ga0190265_11205393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	875	Open in IMG/M
3300018422\|Ga0190265_12413158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300018422\|Ga0190265_13194260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300018429\|Ga0190272_10018730	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3557	Open in IMG/M
3300018429\|Ga0190272_10620762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300018429\|Ga0190272_11422383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300018429\|Ga0190272_11566290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	674	Open in IMG/M
3300018429\|Ga0190272_11955404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300018429\|Ga0190272_12396939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300018432\|Ga0190275_10346219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1476	Open in IMG/M
3300018432\|Ga0190275_10454664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300018432\|Ga0190275_10592932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1155	Open in IMG/M
3300018432\|Ga0190275_11755018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300018432\|Ga0190275_13390187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300018466\|Ga0190268_10287875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	976	Open in IMG/M
3300018466\|Ga0190268_12019021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300018469\|Ga0190270_10155354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1866	Open in IMG/M
3300018469\|Ga0190270_10943479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	884	Open in IMG/M
3300018469\|Ga0190270_11290897	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300018481\|Ga0190271_10251910	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300018481\|Ga0190271_13582707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300019356\|Ga0173481_10078163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1216	Open in IMG/M
3300019356\|Ga0173481_10156160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	946	Open in IMG/M
3300019356\|Ga0173481_10182316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	895	Open in IMG/M
3300019362\|Ga0173479_10331823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300019377\|Ga0190264_10066414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1536	Open in IMG/M
3300019767\|Ga0190267_10067012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1302	Open in IMG/M
3300022756\|Ga0222622_11479015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300022893\|Ga0247787_1037442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	693	Open in IMG/M
3300022901\|Ga0247788_1004761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2178	Open in IMG/M
3300022915\|Ga0247790_10035270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1119	Open in IMG/M
3300023064\|Ga0247801_1026445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	810	Open in IMG/M
3300025960\|Ga0207651_11438249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300028722\|Ga0307319_10259146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300028744\|Ga0307318_10084205	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300028771\|Ga0307320_10101187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1095	Open in IMG/M
3300028876\|Ga0307286_10186887	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300030006\|Ga0299907_10019453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5083	Open in IMG/M
3300030006\|Ga0299907_10050517	All Organisms → cellular organisms → Bacteria	3308	Open in IMG/M
3300030006\|Ga0299907_10066113	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300030006\|Ga0299907_10087730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2539	Open in IMG/M
3300030006\|Ga0299907_10315224	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300030006\|Ga0299907_10509372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300031198\|Ga0307500_10190351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300031228\|Ga0299914_10529306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300031229\|Ga0299913_10586337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1098	Open in IMG/M
3300031547\|Ga0310887_10045591	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300031562\|Ga0310886_10113089	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300031562\|Ga0310886_10729131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300031854\|Ga0310904_10834988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300031854\|Ga0310904_10984214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300031858\|Ga0310892_10430805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	865	Open in IMG/M
3300031892\|Ga0310893_10185083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	831	Open in IMG/M
3300031944\|Ga0310884_10379479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	808	Open in IMG/M
3300032000\|Ga0310903_10661060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300032013\|Ga0310906_10904231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300032013\|Ga0310906_11266015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300032017\|Ga0310899_10105190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1146	Open in IMG/M
3300032075\|Ga0310890_10221448	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300033417\|Ga0214471_10262362	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300033417\|Ga0214471_10710781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.15%
Host-Associated	Host-Associated	13.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.92%
Plants	Host-Associated → Plants	13.85%
Aquatic	Environmental → Aquatic	9.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.00%
Freshwater	Environmental → Aquatic → Freshwater	6.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Sediment	Environmental → Aquatic → Sediment	2.31%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.92%
Ice	Environmental → Aquatic → Freshwater → Ice	6.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	17.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.92%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.15%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	42.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.00%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	6.15%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	6.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.54%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_118092331	3300000891	Soil	YVGREVFQTRIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
JGI10216J12902_1023687843	3300000956	Soil	MFYRGSVSYVGRDIFQTQLDCTCGAHVPLAQYREHMIARHCNVEGCSERALRTVSFGFRDPQFRLIGAPMGICRRHEHFVGKGRMHVIVHPPRSG*
Ga0062593_1009622991	3300004114	Soil	VSYVGRDIFQTEVPCTCGTGVTIMQYREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR*
Ga0062589_1002610012	3300004156	Soil	CGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG*
Ga0062589_1003841683	3300004156	Soil	VSYVDRDILQTRIDCSCGATIRIGEYREHMVRRHCNVDGCSERAFRTVAFGFRDPQFRIIGVPMGICRRHEHAIG
Ga0062589_1008779291	3300004156	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0062589_1010879352	3300004156	Soil	GRSILRCVSYVGREVFQTSIDCSCGAAVTIADLREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0063356_1000614983	3300004463	Arabidopsis Thaliana Rhizosphere	VFYRVWVSYVGRDIFQTRIDCSCGAPIRIGEYADHMVRRHCNVEGCSERAMRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG*
Ga0063356_1000945322	3300004463	Arabidopsis Thaliana Rhizosphere	VSYVGRDVFQTRIDCTCGAAITIAEYREHMVRRHCNVDGCNERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0063356_1005205463	3300004463	Arabidopsis Thaliana Rhizosphere	VSYVGREVFQTRIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0063356_1012422722	3300004463	Arabidopsis Thaliana Rhizosphere	CVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRS*
Ga0063356_1025663111	3300004463	Arabidopsis Thaliana Rhizosphere	CSILGRVSYVGRDIFQTEVPCTCGTGVTIMQYREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR*
Ga0063356_1029744772	3300004463	Arabidopsis Thaliana Rhizosphere	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGTGRMHVIVDPPRG*
Ga0063356_1037446162	3300004463	Arabidopsis Thaliana Rhizosphere	VSYVDRDILQTRIDCSCGATIRIGEYREHMVRRHCNVDGCSERAFRTVAFGFRDPQFRIIGVPMGICRRHEHA
Ga0063356_1064253391	3300004463	Arabidopsis Thaliana Rhizosphere	VSYVGREVFQTRIDCSCGAAVTIADLREHMVRRHCNVEGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHSVGKGRMHVIIDPPRG*
Ga0062592_1001986942	3300004480	Soil	VSYAGEDIFQFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG*
Ga0062592_1012004431	3300004480	Soil	GRSILRCVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRS*
Ga0062592_1017867571	3300004480	Soil	VFYSRRVSYVDRDIFQTRIDCSCGATIRIGEYREHMVRRHCNVEGCSERALRIVSFGFRDPQFRIIGVPMGICRRHEHAIG
Ga0062592_1022907231	3300004480	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHE
Ga0062591_1003399193	3300004643	Soil	VSYVDRDILQTRIDCSCGATIRIGEYREHMVRRHCNVDGCSERAFRTVAFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIVDPPRG*
Ga0071328_1335013	3300005045	Permafrost	VFYALGVSYVGRDIFQTRIDCSCGAPIRIGEYAEHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHTIGKGRMHLIIDPPRG*
Ga0062594_1009746191	3300005093	Soil	VSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR*
Ga0062594_1014147621	3300005093	Soil	DCAESNGRSILRCVSYVGREVFQTSIDCSCGAAVTIADLREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0062594_1020459932	3300005093	Soil	GREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG*
Ga0070674_1003741252	3300005356	Miscanthus Rhizosphere	VSYAGEDIFQFEIDCSCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG*
Ga0068870_113335782	3300005840	Miscanthus Rhizosphere	WAESNGRSILHGVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG*
Ga0082029_16506231	3300006169	Termite Nest	CGAGVTIIQYREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRRS*
Ga0079217_101050792	3300006876	Agricultural Soil	VSYVGRDIFQTRIDCSCGAEVRILDYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPSRG*
Ga0079217_102675202	3300006876	Agricultural Soil	VSYVGRDIFQTRIDCSCGAPIRIGEYADHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHAIGKGRMHMIVDPPRG*
Ga0079215_115010592	3300006894	Agricultural Soil	LREVPPAPSSVLGETEQVFYRCSVSYVGRDIFQTRIDCSCGAPIRIGEYQEHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPP
Ga0079216_106758852	3300006918	Agricultural Soil	LREVPPAPSSVLGETEQVFYRCSVSYVGRDIFQTRIDCSCGAPIRIGEYHEHMVRRHCNVEGCSERALRTVSFAFRDPQFKIIGAPMGICRRHEHAVGKGRMHLIIDPPRG*
Ga0079218_124904162	3300007004	Agricultural Soil	VSYVGREVFQTKIDCSCGAAVTIADLREHMVRRHCNVDGCSERALRTVTFGFRDPQFKMIGVPMGICRRHEHSIGKGRMHLIVDPPRS*
Ga0079218_129602652	3300007004	Agricultural Soil	LVSYVGRDIFQTRIDCSCGAPIRIGEYHEHMVRRHCNVGGCSERALRTVSFGFRDPQFTIIGAPMGICRRHEAAVGRGRMHMIIDPPRG*
Ga0126317_105433762	3300011332	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRS*
Ga0137312_10662742	3300011400	Soil	VSYVGREVFQTKIDCSCGAAVTIAELRQHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0136623_100116072	3300012045	Polar Desert Sand	MRWVSYVDRDIFQTRIDCSCGAPIRIAEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGTPMGICRRHEHAVGKGRMHMIFDPPRG*
Ga0136638_104809601	3300012094	Polar Desert Sand	MLRGVSYVGRDIFQTKIDCTCGSEVTIAQYREHQVRRHCNVDGCSERALRTVSFGFRDRQFRMIGVPMGICRRHEHDVGKGRMHVIVDPPRTG*
Ga0136619_100024387	3300012185	Polar Desert Sand	VSYVDRDIFQTRIDCSCGAPIRIAEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGTPMGICRRHEHAVGKGRMHMIFDPPRG*
Ga0136635_101300922	3300012530	Polar Desert Sand	MIRWVSYVDRDIFLTRIDCSCGAPIRIAEYREHMIRRHCNVEGCSERALRTVSFGFRDPQFRIIGPPMGICRRHEHAVGKGRMHMIIDPPRG*
Ga0136612_1000018313	3300012680	Polar Desert Sand	VGDTWAGTLEQVFYHQSVSYVDRDIFQTRIDCSCGAPIRIAAYRDHMVRRHCNVEDCSERALRTVSFGFRDPQFKIIGAPMGICRRHEHAIGTGRMHLIIDPPRG*
Ga0136611_104078372	3300012682	Polar Desert Sand	MLRGVSYVGRDIFQTKIDCTCGSEVMIAQYREHLVRRHCNVDGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHYVGKGRMHVVVDPPRTG*
Ga0157305_102170681	3300012891	Soil	VSYAGEDIFRFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG*
Ga0157294_100103332	3300012892	Soil	VSYAGEDIFQFEIDCSCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIGKGRMHVIVDPPRRG*
Ga0157291_101318662	3300012902	Soil	VFYSRRVSYVDRDIFQTRIDCSCGATIRIGEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG*
Ga0157283_100543892	3300012907	Soil	VSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPARRS*
Ga0157286_102278042	3300012908	Soil	VSYVGRDIFQTEVPCTCGTGVTIMQYREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIV
Ga0157308_101867072	3300012910	Soil	VSYVGREVFQTRIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPP
Ga0157308_104363081	3300012910	Soil	PPIGAIEHAFYSRRVSYVDRDILQTRIDCSCGATIRIGEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG*
Ga0157306_101526351	3300012912	Soil	VSYAGEDIFQFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRRDASGPNR*
Ga0157298_101052351	3300012913	Soil	VSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMDVIV
Ga0157297_101488812	3300012914	Soil	FQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG*
Ga0157302_100749082	3300012915	Soil	VSYAGEDIFQFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSVAKGRMHVIVDPPRRG*
Ga0075326_10958502	3300014271	Natural And Restored Wetlands	VSYAGRDIFETEIDCSCGMHVTIAHYREHMVERHCNVEGCSERALRTVTFGFRDPQFRMIGVPMGICRRHEHSVGRGRMHVIVNPARR*
Ga0157380_106507702	3300014326	Switchgrass Rhizosphere	LNGRSILHGVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG*
Ga0173483_106967862	3300015077	Soil	DRDIFQTRIDCSCGATIRIGEYREHMVRSHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG*
Ga0173483_107945801	3300015077	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG*
Ga0180093_10778412	3300015258	Soil	VSYVGREVFQTKIDCSCGAAVTIADLREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0132258_124985153	3300015371	Arabidopsis Rhizosphere	SCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0132258_131988152	3300015371	Arabidopsis Rhizosphere	IDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0132256_1008787553	3300015372	Arabidopsis Rhizosphere	VSYVGRDIFHTEIPCTCGTGVTIMQYREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR*
Ga0132256_1013080621	3300015372	Arabidopsis Rhizosphere	VSYVGREVFQTSIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG*
Ga0132257_1018867842	3300015373	Arabidopsis Rhizosphere	VSYVGRDIFQTEVPCTCGTGVTIMQYREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDP
Ga0132255_1021774111	3300015374	Arabidopsis Rhizosphere	VSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGSPMGICRRHEHSIAKGRMHVIVDPPRR*
Ga0180121_101947532	3300017695	Polar Desert Sand	MIRWVSYVDRDIFLTRIDCSCGAPIRIAEYREHMIRRHCNVEGCSERALRTVSFGFRDPQFRIIGPPMGICRRHEHAIGTGRMHLIIDPPRG
Ga0136617_111262911	3300017789	Polar Desert Sand	VGDTWAGTLEQVFYHQSVSYVDRDIFQTRIDCSCGAPIRIAAYREHMVRRHCNVEDCSERALRTVSFGFRDPQFKIIGAPMGICRRHEHAIGTGRMHLIIDPPRG
Ga0190266_100377761	3300017965	Soil	TKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG
Ga0190265_100700496	3300018422	Soil	RCVSYVGKEVFQTKIDCSCGAAVTIADLREHMVRRHCNVDGCSERALRTVTFGFRDPQFKMIGVPMGICRRHEHSIGKGRMHLIVDPPRG
Ga0190265_101795501	3300018422	Soil	CSCGAAVTIADLREHMVRRHCNVDGCSERALRTVTFGFRDPQFKMIGVPMGICRRHEHSIGKGRMHLIVDPPRG
Ga0190265_106899151	3300018422	Soil	CSCGAAVTIADLREHMVRRHCNVDGCSERALRTVTFGFRDPQFKMIGVPMGICRRHEHSIGKGRMHLIVDPPRN
Ga0190265_112053932	3300018422	Soil	SYVGRDIFQTRIDCSCGAPIRIGEYADHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG
Ga0190265_124131582	3300018422	Soil	VSHVDRDIFQTRIDCTCGAPVRITEYREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHSIGMGRMHLIIDPPRG
Ga0190265_131942602	3300018422	Soil	VFYSCEVSYVGRDIFQARIDCTCGAPVRIADYREHLVRRHCNVEGCTDRALRTVSFGFRDPRFQIIGEPMGICRRHEHAVGKGRMHMIIDPPRG
Ga0190272_100187304	3300018429	Soil	MSYVDRDISQTRIDCSCGAPIRIGEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHAIGKGRMHLIVDPPRG
Ga0190272_106207622	3300018429	Soil	MLWWMSYVDRDIFQTRIDCSCGAPIRISEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHAIGKGRMHMIIDPPRT
Ga0190272_114223832	3300018429	Soil	MSYVDRDIFQTRIDCSCGAPIRISEYREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHAIGKGRMHMIIDPPRG
Ga0190272_115662901	3300018429	Soil	VSYVGRDIFQTRIDCSCGAPIRIGEYADHMVRRRCNVDGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHGIGKGRMHLIIDPPRG
Ga0190272_119554042	3300018429	Soil	VSYVGRDIFQTKVDCTCGAEVTIAQYREHLVRRHCNVDGCSERALRIVSFGFRDPQFRIIGVPMGICRRHEHSIGRGRMHVIVDPPRSR
Ga0190272_123969392	3300018429	Soil	MSYVDRDIFQTRIDCSCGAPIRISDYREHLVRRHCNVDGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHMIIDPPRG
Ga0190275_103462192	3300018432	Soil	VSYVGRDIFQTRIDCSCGAPIRIGEYADHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG
Ga0190275_104546642	3300018432	Soil	MSYVDRDISQTRIDCSCGAPIRIGEYREHMIRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHAIGKGRMHLIVDPPRG
Ga0190275_105929321	3300018432	Soil	MSYVDRDISQTRIDCSCGAPIRIGEYREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHSVGKGRMHVIIDPPRG
Ga0190275_117550182	3300018432	Soil	RTAAARSGSGSRRPDHGIERLFYPEGVSYVGRDIFETKVDCTCGAEVTIAQYREHLVRRHCNVDGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGRGRMHVIVDPPRSR
Ga0190275_133901871	3300018432	Soil	MLGWMSYVDRDIFQTRIDCSCGAPIRISEYREHLVRRHCNVEGCSERALRAVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHMII
Ga0190268_102878752	3300018466	Soil	VSYVGREVFQTKIDCSCGAAVTIADLREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0190268_120190211	3300018466	Soil	MSYVDRDIFQTRIDCSCGAPIRISDYREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGQGRMHLIVDPPRG
Ga0190270_101553543	3300018469	Soil	SVPVSYVGGDIFETKLDCTCGAEVTIARYREHMVLRHCNVDGCHERALRTVTFGFRDPQFRMIGGPMGICRRHEHYVGKGRMHVVVDPRRG
Ga0190270_109434792	3300018469	Soil	VSYVGRDIFQTQLDCTCGAHVPIAQYREHMIARHCNVEGCSERALRTVTFGFRDPQFRMVGAPMGICRRHEHFVGKGRMHVIVHPPRSG
Ga0190270_112908972	3300018469	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0190271_102519102	3300018481	Soil	LAGRIERLFYPVPVSYVGGDIFETKLDCTCGAEVTIARYREHMVLRHCNVDGCFERAFRTLTFGFRDPQFRLIGGPMGICRRHEHYVGKGRMHVVVDPPRR
Ga0190271_135827071	3300018481	Soil	VSYAGRDIFETEIDCSCGMHVTIAHYREHMVERHCNVEGCSERALRTVTFGFRDPQFRMIGVPMGICRRHEHSVGKGRMHVIVNPARR
Ga0173481_100781632	3300019356	Soil	VSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHAHSIGKGRMHVIVDPPRR
Ga0173481_101561602	3300019356	Soil	VSYVGREVFQTRIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0173481_101823162	3300019356	Soil	VSYAGEDIFQFEIDCSCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIGKGRMHVIVDPARRS
Ga0173479_103318232	3300019362	Soil	VSYVDRDIFQTRIDCSCGATIRIGEYREHMVRRHCNVDGCSERAFRTVAFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG
Ga0190264_100664143	3300019377	Soil	MLCLMSYVDRDIFQTRIDCSCGAPIRIGEYAEHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHMIIDPPRG
Ga0190267_100670124	3300019767	Soil	FQTKVDCTCGAEVTIAQYREHLVRRHCNVDGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHSIGKGRMHLIVDPPRSG
Ga0222622_114790151	3300022756	Groundwater Sediment	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHS
Ga0247787_10374421	3300022893	Soil	VSYAGEDIFQFEIDCSCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG
Ga0247788_10047611	3300022901	Soil	VSYAGEDIFQFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSVAK
Ga0247790_100352702	3300022915	Soil	TGVLFSAGVSYAGEDIFQFEIDCSCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG
Ga0247801_10264452	3300023064	Soil	VSYAGEDIFQFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIGKGRMHVIV
Ga0207651_114382492	3300025960	Switchgrass Rhizosphere	VSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR
Ga0307319_102591462	3300028722	Soil	MEVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVG
Ga0307318_100842051	3300028744	Soil	MEVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPP
Ga0307320_101011872	3300028771	Soil	MEVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0307286_101868872	3300028876	Soil	VSYVGREVFQTKIDCSCGAAVTIGELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG
Ga0299907_100194533	3300030006	Soil	VFYSGRVSYVGRDIFQARIDCSCGAPVRIADYREHLVRRHCNVEGCTDRALRTVSFGFRDPRFRIIGEPMGICRRHEHAIGKGRMHLIIDPPRS
Ga0299907_100505175	3300030006	Soil	VSYVGRDIFQTRIDCTCGAPVRIVEYREHMVRRHCNVVGCSERALRTVSFGFRDPQFRIIGAPMGICRRHEHSIGKGRMHLIIDPPRG
Ga0299907_100661133	3300030006	Soil	VREDTGSFMSQTVRRTGVLFWGVSYVGRDIFQAKLDCDCGAAVAIVNYREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHNFGTGRMHVIVDPPRSA
Ga0299907_100877305	3300030006	Soil	VSYVGRDIFETKLDCTCGAAVAIREYREHPVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPLGICRRHEHYVGKGRMHVIVDPPRGR
Ga0299907_103152243	3300030006	Soil	VSYVGKEVFHTKIDCSCGAAVTIADLREHMVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHLIVDPPRN
Ga0299907_105093721	3300030006	Soil	ILRCVSYVGKEVFQTRIDCSCGAAVTIADLREHMVRRHCNVDGCSERALRTVSFGFRDPQFKMIGVPMGICRRHEHSIGKGRMHLIVDPPRG
Ga0307500_101903511	3300031198	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0299914_105293062	3300031228	Soil	SCGAAVTIADLREHMVRRHCNVDGCSERALRTVTFGFRDPQFKMIGVPMGICRRHEHSIGKGRMHLIVDPPRR
Ga0299913_105863371	3300031229	Soil	VSYVGRDIFQTRIDCTCGAPVRITEYREHLVRRHCNVEGCTERALRTVSFGFRDPQFRIIGAPMGICRRHEHSIGKGRMHLIIDPPR
Ga0310887_100455913	3300031547	Soil	LNGRSILHGVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG
Ga0310886_101130892	3300031562	Soil	VSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG
Ga0310886_107291311	3300031562	Soil	VSYVGREVFETRIDCSCGAAVTIADLREHMVRRHCNVEGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0310904_108349882	3300031854	Soil	FETRIDCSCGAAVTIADLREHMVRRHCNVEGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0310904_109842141	3300031854	Soil	VSYVGREVFQTSIDCSCGAAVTIADLREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRG
Ga0310892_104308052	3300031858	Soil	VSYVGREVFETRIDCSCGAAVTIADLREHMVRRHCNVEGCSERALRTVSFGFRDPQFRMIGVPMGICRRHEHSIGKGRMHVIVDPPRR
Ga0310893_101850831	3300031892	Soil	SILHGVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG
Ga0310884_103794791	3300031944	Soil	LNGRSILHGVSYVGREVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGK
Ga0310903_106610601	3300032000	Soil	VSYVGRDIFQTEIPCTCGIGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR
Ga0310906_109042311	3300032013	Soil	EIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR
Ga0310906_112660152	3300032013	Soil	RKGASGGSRTGVLFSAGVSYAGEDIFQFEIDCRCGARVAIVQYREHMVRRHCNVEGCSDRALRTVSFGFRDPQFRIIGTPMGICRRHEHSIAKGRMHVIVDPPRRG
Ga0310899_101051902	3300032017	Soil	REVFQTKIDCSCGAAVTIAELREHLVRRHCNVEGCSERALRTVSFGFRDPQFRIIGVPMGICRRHEHSVGKGRMHVIVDPPRG
Ga0310890_102214484	3300032075	Soil	LERVSYVGRDIFQTEIPCTCGTGVAIIQFREHMIRRHCNVEGCSDRALRTVSFGFRDPQFRIIGVPMGICRRHEHSIGKGRMHVIVDPPRR
Ga0214471_102623622	3300033417	Soil	MSYVDRDIFQTRIDCSCGAPIRIGEYREHMVRRHCNVEGCAERALRTVSFGFRDPQFRIIGVPMGICRRHEHAIGKGRMHLIIDPPRG
Ga0214471_107107812	3300033417	Soil	MSGAVERLFYSSEVSYVDRDIFKTRIDCSCGAPIRIVDYREHLVRRHCNVEGCTDRALRTVSFGFRDPQFRIIGATMGICRRHEHAIGKGRMHMIIDPPRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063056

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences