Metagenome / Metatranscriptome Family F063027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	42 residues
Representative Sequence	MHNMKEDAKEAAKDSGMKKSDAEHGHLKVTDVKMVSDSCQK
Number of Associated Samples	117
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.56 %
% of genes near scaffold ends (potentially truncated)	94.62 %
% of genes from short scaffolds (< 2000 bps)	87.69 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.769 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.308 % of family members)
Environment Ontology (ENVO)	Unclassified (44.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.68% β-sheet: 0.00% Coil/Unstructured: 62.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00072	Response_reg	4.62
PF04055	Radical_SAM	3.85
PF14534	DUF4440	3.08
PF00882	Zn_dep_PLPC	2.31
PF00174	Oxidored_molyb	1.54
PF04191	PEMT	1.54
PF04932	Wzy_C	0.77
PF10417	1-cysPrx_C	0.77
PF16916	ZT_dimer	0.77
PF04794	YdjC	0.77
PF05974	DUF892	0.77
PF04616	Glyco_hydro_43	0.77
PF13414	TPR_11	0.77
PF09650	PHA_gran_rgn	0.77
PF00480	ROK	0.77
PF13424	TPR_12	0.77
PF05649	Peptidase_M13_N	0.77
PF13502	AsmA_2	0.77
PF07730	HisKA_3	0.77
PF11218	DUF3011	0.77
PF00857	Isochorismatase	0.77
PF01797	Y1_Tnp	0.77
PF03050	DDE_Tnp_IS66	0.77
PF11066	DUF2867	0.77
PF13561	adh_short_C2	0.77
PF00196	GerE	0.77
PF11752	DUF3309	0.77
PF08445	FR47	0.77
PF00078	RVT_1	0.77
PF01569	PAP2	0.77
PF00578	AhpC-TSA	0.77
PF12779	WXXGXW	0.77
PF13490	zf-HC2	0.77
PF13620	CarboxypepD_reg	0.77
PF04226	Transgly_assoc	0.77
PF04773	FecR	0.77
PF07715	Plug	0.77
PF14559	TPR_19	0.77
PF08308	PEGA	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.54
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.54
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.54
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.77
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.77
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.77
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.77
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	0.77
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.77
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.77
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.77
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.77
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.54 %
Unclassified	root	N/A	18.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.54 %
Unclassified	root	N/A	18.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.77 %
Unclassified	root	N/A	18.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.92 %
Unclassified	root	N/A	18.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.85 %
Unclassified	root	N/A	18.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.54 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.85 %
Unclassified	root	N/A	18.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.54 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.85 %
Unclassified	root	N/A	18.46 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.08 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.77 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.77 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.85 %
Unclassified	root	N/A	18.46 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.54 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.77 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.77 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.85 %
Unclassified	root	N/A	18.46 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.77 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.77 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.85 %
Unclassified	root	N/A	18.46 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.77 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.77 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.85 %
Unclassified	root	N/A	18.46 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.77 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.77 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459018\|G1P06HT01AWGFP	Not Available	517	Open in IMG/M
3300000789\|JGI1027J11758_12814669	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300001593\|JGI12635J15846_10605176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300002245\|JGIcombinedJ26739_101429425	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300002245\|JGIcombinedJ26739_101828095	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005176\|Ga0066679_10127820	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300005435\|Ga0070714_102127013	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	547	Open in IMG/M
3300005436\|Ga0070713_100172006	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300005439\|Ga0070711_100024579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3932	Open in IMG/M
3300005445\|Ga0070708_100376394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1339	Open in IMG/M
3300005450\|Ga0066682_10304177	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005451\|Ga0066681_10374659	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005537\|Ga0070730_11045192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005539\|Ga0068853_100481971	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005568\|Ga0066703_10353472	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005578\|Ga0068854_100485974	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005598\|Ga0066706_10620256	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300005764\|Ga0066903_107332913	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005843\|Ga0068860_101327743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300006047\|Ga0075024_100094269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300006102\|Ga0075015_100670929	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300006173\|Ga0070716_100271616	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300006175\|Ga0070712_101395411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300006176\|Ga0070765_101513654	Not Available	631	Open in IMG/M
3300006794\|Ga0066658_10357742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300006893\|Ga0073928_10043771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4109	Open in IMG/M
3300006893\|Ga0073928_10150680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1877	Open in IMG/M
3300007982\|Ga0102924_1322733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300009038\|Ga0099829_10095481	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300009038\|Ga0099829_10491824	Not Available	1018	Open in IMG/M
3300009088\|Ga0099830_11048364	Not Available	676	Open in IMG/M
3300009089\|Ga0099828_10230102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1658	Open in IMG/M
3300009092\|Ga0105250_10330368	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300009148\|Ga0105243_10728397	Not Available	970	Open in IMG/M
3300009174\|Ga0105241_11995031	Not Available	571	Open in IMG/M
3300009553\|Ga0105249_11914354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300010043\|Ga0126380_11781819	Not Available	556	Open in IMG/M
3300010047\|Ga0126382_10959664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300010322\|Ga0134084_10184867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300010335\|Ga0134063_10056456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300010336\|Ga0134071_10072465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300010360\|Ga0126372_13267040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010364\|Ga0134066_10315570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010375\|Ga0105239_10360244	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300010375\|Ga0105239_12960945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300011119\|Ga0105246_10455857	Not Available	1076	Open in IMG/M
3300011120\|Ga0150983_14535429	Not Available	598	Open in IMG/M
3300012096\|Ga0137389_10089608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2422	Open in IMG/M
3300012198\|Ga0137364_11280903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012202\|Ga0137363_10377697	Not Available	1177	Open in IMG/M
3300012205\|Ga0137362_10891906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300012351\|Ga0137386_10237035	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300012353\|Ga0137367_10502359	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300012361\|Ga0137360_10034111	All Organisms → cellular organisms → Bacteria	3548	Open in IMG/M
3300012362\|Ga0137361_11145160	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012363\|Ga0137390_10477992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300012922\|Ga0137394_10980842	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300012927\|Ga0137416_11727591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300012927\|Ga0137416_12071340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012927\|Ga0137416_12108741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012929\|Ga0137404_10657052	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300012930\|Ga0137407_10311274	All Organisms → cellular organisms → Bacteria → Acidobacteria	1442	Open in IMG/M
3300012930\|Ga0137407_11137237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	740	Open in IMG/M
3300012944\|Ga0137410_11949810	Not Available	521	Open in IMG/M
3300013296\|Ga0157374_11179967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300013306\|Ga0163162_11905000	All Organisms → cellular organisms → Archaea	680	Open in IMG/M
3300013308\|Ga0157375_10382882	Not Available	1573	Open in IMG/M
3300014154\|Ga0134075_10015440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2988	Open in IMG/M
3300014325\|Ga0163163_10438703	Not Available	1365	Open in IMG/M
3300014501\|Ga0182024_11156392	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300015167\|Ga0167661_1045640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	823	Open in IMG/M
3300015264\|Ga0137403_10127116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2535	Open in IMG/M
3300017927\|Ga0187824_10022986	All Organisms → cellular organisms → Bacteria → Acidobacteria	1848	Open in IMG/M
3300017930\|Ga0187825_10305276	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300020006\|Ga0193735_1002104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6431	Open in IMG/M
3300020006\|Ga0193735_1130245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300020170\|Ga0179594_10372749	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300020579\|Ga0210407_11411831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300020581\|Ga0210399_10168545	Not Available	1815	Open in IMG/M
3300020583\|Ga0210401_10475001	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300021088\|Ga0210404_10295691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300021170\|Ga0210400_11181173	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021170\|Ga0210400_11377673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300021344\|Ga0193719_10071312	Not Available	1508	Open in IMG/M
3300021344\|Ga0193719_10242755	Not Available	763	Open in IMG/M
3300021478\|Ga0210402_10134622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2243	Open in IMG/M
3300021479\|Ga0210410_10735593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300021560\|Ga0126371_13737793	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300025320\|Ga0209171_10020068	All Organisms → cellular organisms → Bacteria	5341	Open in IMG/M
3300025321\|Ga0207656_10386411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300025893\|Ga0207682_10636224	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300025900\|Ga0207710_10547430	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300025910\|Ga0207684_10296569	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300025916\|Ga0207663_11678957	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025960\|Ga0207651_12085339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300026078\|Ga0207702_10244781	Not Available	1681	Open in IMG/M
3300026281\|Ga0209863_10012131	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300026308\|Ga0209265_1136887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300026323\|Ga0209472_1045574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1915	Open in IMG/M
3300026325\|Ga0209152_10212571	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300026326\|Ga0209801_1208069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300026328\|Ga0209802_1201689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300026377\|Ga0257171_1053926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300026523\|Ga0209808_1065747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300026529\|Ga0209806_1279599	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300026557\|Ga0179587_10518059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	783	Open in IMG/M
3300027548\|Ga0209523_1037537	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300027565\|Ga0209219_1004152	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300027587\|Ga0209220_1199987	Not Available	507	Open in IMG/M
3300027842\|Ga0209580_10455695	Not Available	637	Open in IMG/M
3300027846\|Ga0209180_10132510	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300027846\|Ga0209180_10475622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300027875\|Ga0209283_10705218	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300027903\|Ga0209488_10827299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300027908\|Ga0209006_11275695	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300027915\|Ga0209069_10108725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300028047\|Ga0209526_10501067	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300028047\|Ga0209526_10729978	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300028536\|Ga0137415_11119871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300028673\|Ga0257175_1130488	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300028828\|Ga0307312_10551795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	762	Open in IMG/M
3300028906\|Ga0308309_11007145	Not Available	722	Open in IMG/M
3300030991\|Ga0073994_11836677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031090\|Ga0265760_10365258	Not Available	518	Open in IMG/M
3300031232\|Ga0302323_103463326	Not Available	502	Open in IMG/M
3300031716\|Ga0310813_10014986	All Organisms → cellular organisms → Bacteria → Acidobacteria	5135	Open in IMG/M
3300031823\|Ga0307478_10983300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300032770\|Ga0335085_10218949	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	14.62%
Engineered	Engineered	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.69%
Plants	Host-Associated → Plants	14.62%
Aquatic	Environmental → Aquatic	6.92%
Solid Waste	Engineered → Solid Waste	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.08%
Sediment	Environmental → Aquatic → Sediment	2.31%
Freshwater	Environmental → Aquatic → Freshwater	1.54%
Peat	Environmental → Terrestrial → Peat	0.77%
Roots	Host-Associated → Plants → Roots	0.77%
Grass	Engineered → Solid Waste → Grass	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.69%
Loam	Environmental → Terrestrial → Soil → Loam	16.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%
Composting	Engineered → Solid Waste → Grass → Composting	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.77%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.54%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2MG_02462930	2170459018	Switchgrass, Maize And Mischanthus Litter	MKEDAKDAAKDSGMKKSNAEHGHLKPTDVQMIGDTCTK
JGI1027J11758_128146692	3300000789	Soil	HNMKEDTKDMAQDTGMKKSNNEHGHLKATNVKMVSDSCSK*
JGI12635J15846_106051761	3300001593	Forest Soil	AMHNMKEDTKDMAKDSGAKKDNSEHGHLTITDLKMVSETCGQ*
JGIcombinedJ26739_1014294251	3300002245	Forest Soil	MKEDAKDAAKDSGMKKDDSEHGHLKITAVKMVSESCK*
JGIcombinedJ26739_1018280951	3300002245	Forest Soil	MHNMKEDAKGAAKDSGMKKSDAEHGHTTITKVKMVSDSC*
Ga0066679_101278203	3300005176	Soil	KMHNMKEDAKDVAKDTGAKKSNSEHGHLKVTNVKMVSDSCRE*
Ga0070714_1021270132	3300005435	Agricultural Soil	AMAHNMKEDTKDMAHDTGATKENSEHGHLTVTHVKHVSDTCSK*
Ga0070713_1001720061	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NMKEDTKDMAHDTGAMKTNNEHGHLKVTHLKHVSDSCSK*
Ga0070711_1000245791	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	KMHNMKEDTKDMAHDSGVTKENNEHGHLKVTDVKMVSDSCSK*
Ga0070708_1003763943	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TGVVSNAKMHNMKEDAKEAAKDSGMKKSDAEHGHLTITEVKMVSDSCK*
Ga0066682_103041775	3300005450	Soil	MHNMKEDAKDAAKDSGMKKSDAEHGHMKITDVKMVSESCK*
Ga0066681_103746591	3300005451	Soil	NNKMHNLKEDAKDTAHDTGMKKDNREHGHLTVTDVQMVSSSCSQ*
Ga0070730_110451922	3300005537	Surface Soil	VSHTKMHNMKEDAKDAAKDSGMAKNSTEHGHLTVTHVRMVGESCQQ*
Ga0068853_1004819711	3300005539	Corn Rhizosphere	KMHNLKEDAKDAAHDTGVKKSNNEHGHLKATDVQMVSSSCSQ*
Ga0066703_103534721	3300005568	Soil	MHNMKEDAKEAAKDSGMKKSDAEHGHLKVTDVKMVSDSCQK*
Ga0068854_1004859741	3300005578	Corn Rhizosphere	AMHNMKEDTKDMAKDAGMKKSNTEHGHLKITDVKMVSDSCSK*
Ga0066706_106202561	3300005598	Soil	AKEAAKDSGMKKSDAEHGHLKVTDVKMVSDSCQK*
Ga0066903_1073329131	3300005764	Tropical Forest Soil	VSNETMHNMKEDVKGAVDKDSKEHGHLTVTAVKMVSESCK*
Ga0068860_1013277432	3300005843	Switchgrass Rhizosphere	EHSTMHNMKEDTKDMAQDTGMKKSNNEHGHLKATNVKMVSDSCSK*
Ga0075024_1000942691	3300006047	Watersheds	MMHNMKEDAKDAAKDSGMKKSGAEHGHMKITDVKMVSDSCQK*
Ga0075015_1006709291	3300006102	Watersheds	ATMHNMKEDAKDAAKDSGATKTNHEHGHLTVTQVKMVSDSCK*
Ga0070716_1002716161	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	NMKEDAKDAAKDSGMKKTNAEHGHMTVTDLKMVSESCQ*
Ga0070712_1013954112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ATGVVSNATMHNMKEDAKDAAKDSGMTKSDNEHGHLKVTAVKMVSESCK*
Ga0070765_1015136541	3300006176	Soil	HNMKEDAKDAAKDSGMKKDDSEHGHLKVTAVKMVSESCK*
Ga0066658_103577422	3300006794	Soil	LHNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK*
Ga0073928_100437717	3300006893	Iron-Sulfur Acid Spring	HNMKEDTKDLAKDSGAKKDNSEHGHLTITDLTMVSETCGH*
Ga0073928_101506801	3300006893	Iron-Sulfur Acid Spring	EDTKDLAKDSGAKKDNSEHGHLTITDLKMVSETCGQ*
Ga0102924_13227333	3300007982	Iron-Sulfur Acid Spring	STMHNMKEDTKDLAKDSGAKKDNSEHGHLTITDLTMVSETCGH*
Ga0099829_100954811	3300009038	Vadose Zone Soil	HNMKEDAKETAKDSGMKKSDAEHGHMTITDVKMVSESCK*
Ga0099829_104918242	3300009038	Vadose Zone Soil	VVSNAKMHNMKEDAKEAAKDSGMKKSDGEHGHLKVTEVKMVSDSCK*
Ga0099830_110483641	3300009088	Vadose Zone Soil	GVVSNAKMHNMKEDAKETAKDSGMKKSDTEHGHMTITDVKMVSESCK*
Ga0099828_102301021	3300009089	Vadose Zone Soil	VSHAKMHNMKEDVKEAAKDSGMKKSDTEHGHMKITDVKMVSDSCQK*
Ga0105250_103303681	3300009092	Switchgrass Rhizosphere	NLKEDAKDAAKDSGMTKANNEHGHLTVTEVKMVSESCQ*
Ga0105243_107283972	3300009148	Miscanthus Rhizosphere	TAAMHNMKEDAKDAAHDAGMKDKNTEHGHLQITDVKMVSDSCTK*
Ga0105241_119950311	3300009174	Corn Rhizosphere	HNMKEDAKDAAKDSGMKKTNHEHGHITVTDVKMVSESCN*
Ga0105249_119143541	3300009553	Switchgrass Rhizosphere	KMHNMKEDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK*
Ga0126380_117818192	3300010043	Tropical Forest Soil	AHNMKEDTKHAMADTHMKKDNREHGDLKVTDLSMVSSSCK*
Ga0126380_119092141	3300010043	Tropical Forest Soil	MTGVVSNSTMHNMKEDAKTTVNKNSAEHGSLTVTAVQMVSESCK*
Ga0126382_109596642	3300010047	Tropical Forest Soil	VKNSTAHNLKEDAKDAASDAHMKKDNSEHGHLTITDVKMVDESCKQ*
Ga0134084_101848672	3300010322	Grasslands Soil	KLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0134063_100564561	3300010335	Grasslands Soil	NMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK*
Ga0134071_100724653	3300010336	Grasslands Soil	KLHNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK*
Ga0126372_132670401	3300010360	Tropical Forest Soil	AHNVKEDAKDVAHDTGMKKDNSEHGHLKVTDVQMVSTSCSQ*
Ga0134066_103155701	3300010364	Grasslands Soil	EDAKEAAKDSGMKKSDAEHGHLTVTEVKMVSDSCK*
Ga0105239_103602441	3300010375	Corn Rhizosphere	DAKDAAKDSGMKKTNEEHGHLTVTQVKMVSESCN*
Ga0105239_129609451	3300010375	Corn Rhizosphere	NATAHNLKEDAKDAAKDSGMTKANNEHGHLTVTEVKMVSESCQ*
Ga0105246_104558572	3300011119	Miscanthus Rhizosphere	EDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK*
Ga0150983_145354291	3300011120	Forest Soil	AKETAKDTGVTKDDKEHGHLTITAIKMVSESCKY*
Ga0137389_100896081	3300012096	Vadose Zone Soil	EDAKDAAKDSGMTKSDNEHGHLKVTAVKMVSESCK*
Ga0137364_112809031	3300012198	Vadose Zone Soil	MHNMKEDVKEAAKDSGMKKSDSEHGHMKITSVKMVSDSCQK*
Ga0137363_103776973	3300012202	Vadose Zone Soil	VVSNAKMHNMKEDAKETAKDSGMKKSNTEHGHTKITDVKIVSESYK*
Ga0137362_108919062	3300012205	Vadose Zone Soil	NATAHNMKEDAKDAAKDSGMKKSDAEHGHMKITDIKMVSESCQK*
Ga0137386_102370354	3300012351	Vadose Zone Soil	ATGVVSHAKMHNMKEDAKEAAKDSGMKKSDTEHGHLTITDVKMVSESCK*
Ga0137367_105023591	3300012353	Vadose Zone Soil	TKEMAKDSGMKKSNNEHGHLKVTDVKKLSDTCQQ*
Ga0137360_100341111	3300012361	Vadose Zone Soil	TGVVSNATMHNMKEDAKEAAKDSGMKKTDNEHGHLKVTAVQMVSDSCK*
Ga0137361_111451602	3300012362	Vadose Zone Soil	TGVVSNAKMHNMKEDAKETAKDSGMKKSDAEHGHMTITDVKMVSESCK*
Ga0137390_104779921	3300012363	Vadose Zone Soil	ATGVVSHAKMHNMKEDAKEAAKDSGMKKSDTEHGHMKITDEKMVRDSCKK*
Ga0137394_109808422	3300012922	Vadose Zone Soil	GHTVTATGVISNATMDNMKEDAKEAAKDSGMKKTDNEHGHLKVTAVQMVSDSCK*
Ga0137416_117275912	3300012927	Vadose Zone Soil	VVSHAKLHNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK*
Ga0137416_120713401	3300012927	Vadose Zone Soil	SNATAHNMKEDTKDMAHDTGMKKDNREHGHLKVTDVQMVSESCK*
Ga0137416_121087411	3300012927	Vadose Zone Soil	NMKEDAKDAAKDSGMKKDSSEHGHLKVTDVTLVSDSCQK*
Ga0137404_106570521	3300012929	Vadose Zone Soil	MHNMKEDAKDAAKESGMTKTNNEHGHLTVTQVKMVSDSCQ*
Ga0137407_103112741	3300012930	Vadose Zone Soil	MHNMKEDAKETAKDSGMKKSNAEHGHVKITDVKMVSESYK*
Ga0137407_111372371	3300012930	Vadose Zone Soil	AKMHNMKEDAKDAAKDSGMKKSDAEHGHLTVTEVKMISDSCK*
Ga0137410_119498101	3300012944	Vadose Zone Soil	HNMKEDAKDAAKDSGMKKSDAEHGHMKITDIKMVSESCQK*
Ga0157374_111799671	3300013296	Miscanthus Rhizosphere	HNLKEDAKDAAKDSGMKKSNTEHGHLKVTDVKMVSNSCK*
Ga0163162_119050001	3300013306	Switchgrass Rhizosphere	HNMKEDAKDAAQDAGMKKDNKEHGHMEITDVKMVSDSCSK*
Ga0157375_103828821	3300013308	Miscanthus Rhizosphere	DAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK*
Ga0134075_100154401	3300014154	Grasslands Soil	KLHNMKEDTKDMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0163163_104387031	3300014325	Switchgrass Rhizosphere	KEDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK*
Ga0182024_111563921	3300014501	Permafrost	LHNLKEDTKEAATDSGMKKADSEHGHLTITEVKMVSDSCQK*
Ga0167661_10456401	3300015167	Glacier Forefield Soil	GVVSNAKMHNMKEDAKEAAKDSGVKKSDAEHGHMKITSVKMVSDSCQK*
Ga0137403_101271161	3300015264	Vadose Zone Soil	HAKMHNMKEDAQEAAKDSGMKKSNPEHGHLTITDVKMVSESCK*
Ga0187824_100229863	3300017927	Freshwater Sediment	SNAKMHNMKEDAKDAAKDSGMKKSDNEHGHLKVTEVKMVSDSCK
Ga0187825_103052762	3300017930	Freshwater Sediment	VVRNAMAHNMKEDAKDAAADADLKKDNSEHGHLTVTRLKMVSESCGK
Ga0193735_10021041	3300020006	Soil	MHNMKEDAKEAAKDSGMKKSDAEHGHLTVTEIKMVSDSCKWSINV
Ga0193735_11302452	3300020006	Soil	VSNATMHNMKEDAKDAAKDSGMKKSDAEHGHMKITDVKMVSESCK
Ga0179594_103727492	3300020170	Vadose Zone Soil	KEDAKETAKDSGMKKSNAEHGHMKITDVKMVSKSCK
Ga0210407_114118312	3300020579	Soil	NATAHNMKEDAKDAAKDSGMKKDNSEHGHLTVTQVKMVSESCN
Ga0210399_101685452	3300020581	Soil	HNMKEDAKDAAKDSGMKKDDSEHGHLKVTAVKMVSESCK
Ga0210401_104750012	3300020583	Soil	KEDAKDAAKDSGMKKDNSEHGHLTVTQIKMVSESCN
Ga0210404_102956911	3300021088	Soil	HNLKEDAKDAAKDTGVKKTDTEHGHLTITSMKMVGESCK
Ga0210400_111811731	3300021170	Soil	NMKEDAKDAAKDSGMKKNGAEHGHLKVTDVRMIGESCQQ
Ga0210400_113776731	3300021170	Soil	SNATMHNMKEDTKDMAKDSGMKKSNTEHGHMKITDLKMVSESCK
Ga0193719_100713121	3300021344	Soil	GVVSNAKMHNMKEDAKDAAKDSGMTKSNEEYGHLKVTDVKMVSDSCQQ
Ga0193719_102427551	3300021344	Soil	HNMKEDAKDAAKDSGATKTNDEHGHLKITAVKMVSDSCK
Ga0210402_101346223	3300021478	Soil	MHNLKEDTKDMAKDSGVKKDNSEHGHMKITDLKMVSDSCQK
Ga0210410_107355931	3300021479	Soil	LKEDAKETAKDTGVTKDDKEHGHLTITAIKMVSESCKY
Ga0126371_137377931	3300021560	Tropical Forest Soil	KEDAKDMSDDIGVKKNNAEHGHMKITDLQMVSHSCSQ
Ga0209171_100200687	3300025320	Iron-Sulfur Acid Spring	GVVSNSTMHNMKEDTKDLAKDSGAKKDNSEHGHLTITDLTMVSETCGH
Ga0207656_103864112	3300025321	Corn Rhizosphere	HNLKEDTKDVAKDAHMSKSNSEHGHMKITDVQMVSSSCSK
Ga0207682_106362241	3300025893	Miscanthus Rhizosphere	LKEDAKDAAHDTGVKKSNNEHGHLKATDVQMVSSSCSQ
Ga0207710_105474303	3300025900	Switchgrass Rhizosphere	DAKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ
Ga0207684_102965691	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TKEDTKDMAHDTGMKKDNSEHGALTVTDVQMVSDSCQK
Ga0207663_116789572	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EDAKDAAKDSGMKKTNDEHGHLTVTQVKMVSESCN
Ga0207651_120853392	3300025960	Switchgrass Rhizosphere	VSNAGMHNLKEDAKDAAHDTGVKKSNNEHGHLKATEVQMVSTSCSQ
Ga0207702_102447811	3300026078	Corn Rhizosphere	MHNMKEDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK
Ga0209863_100121311	3300026281	Prmafrost Soil	HNIKEDAKDAAKDSGMKKSDTEHGHMKITDVKMVSDSCK
Ga0209265_11368872	3300026308	Soil	HARLHNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK
Ga0209472_10455741	3300026323	Soil	KEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK
Ga0209152_102125712	3300026325	Soil	NLKEDAKDTAHDTGMKKDNREHGHLTVTDVQMVSSSCSQ
Ga0209801_12080692	3300026326	Soil	HAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK
Ga0209802_12016892	3300026328	Soil	HNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK
Ga0257171_10539261	3300026377	Soil	AKMHNMKEDAKEAAKDSGMKKSDTEHGHLTITDVKMVSESCK
Ga0209808_10657473	3300026523	Soil	NMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK
Ga0209806_12795993	3300026529	Soil	HAKMHNMKEDAKEAAKDSGMKKSDAEHGHLKVTDVKMVSDSCQK
Ga0179587_105180592	3300026557	Vadose Zone Soil	KEDTKDMAKDSGLKKDNSEHGHLRVTDLKMVSDSCGK
Ga0209523_10375372	3300027548	Forest Soil	KEDAKTAATDSGVKKNDNEHGHLKVTGLKMVSESCK
Ga0209219_10041521	3300027565	Forest Soil	GVVSNAKMHNMKEDAKETAKDSGMKKSDTEHGHMKITDVKMVSDSCQK
Ga0209220_11999871	3300027587	Forest Soil	HNMKEDAKDTAKDAGANNSTREHGHLTITSMKMVGESCRY
Ga0209580_104556952	3300027842	Surface Soil	NAKMHNLKEDAKDAAKDTGMKKDNKEHGHLKITDVQTVSESCQR
Ga0209180_101325102	3300027846	Vadose Zone Soil	TATGVVSHAKMHNMKEDAKEAAKDSGMKKSDTEHGHMTITDVKMVSESCK
Ga0209180_104756222	3300027846	Vadose Zone Soil	HAKLHNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK
Ga0209283_107052182	3300027875	Vadose Zone Soil	MHNMKEDAKEAAKDSGMKKSDAEHGHMTITDVKMVSESCK
Ga0209488_108272991	3300027903	Vadose Zone Soil	GVVSNATMHNMKEDAKGAAKDSGMTKSDNEHGHLKVTAVKMVSESCK
Ga0209006_112756952	3300027908	Forest Soil	KMHNLKEDAKDAAKDSGMKKSNTEHGHLEVTDVRSVSASCQK
Ga0209069_101087251	3300027915	Watersheds	MMHNMKEDAKDAAKDSGMKKSGAEHGHMKITDVKMVSDSCQK
Ga0209526_105010672	3300028047	Forest Soil	MHNMKEDAKGAAKDSGMKKSDAEHGHTTITKVKMVSDSC
Ga0209526_107299782	3300028047	Forest Soil	VVSNAKMHNMKEDAKEAAKDSGMKKSDDEHGHMKVTEVKMVSDSCQK
Ga0137415_111198712	3300028536	Vadose Zone Soil	TGVVSNAKMHNMKEDTKEMAKDSGMKKSDAEHGHLKATDVKMVSDSCK
Ga0257175_11304881	3300028673	Soil	KEDAKEAAKDSGMKKSDAEHGHLTVTEVKMVSDSCK
Ga0307312_105517951	3300028828	Soil	KEDAKDAAKDSGMKKSDSERGHMKITDVKMVSESCQK
Ga0308309_110071451	3300028906	Soil	SNATMHNMKEDAKDAAKDSGMKKDDSEHGHLKVTAVKMVSESCK
Ga0073994_118366771	3300030991	Soil	HNLKEDAKDTATDAGVKKDNREHGHLTITSIKMVSESCKY
Ga0265760_103652581	3300031090	Soil	NLKEDAKDAAKDSGMKKDNSEHGHLTITAVKMVSDSCQK
Ga0302323_1034633261	3300031232	Fen	TVTATGVVANPAMHNMKEDAKNTVDKDSMEHGHLTVTAVKMVSESCK
Ga0310813_100149861	3300031716	Soil	STAHNMKEDTKDMAHDTGMKKDNSEHGTLKVTDVQMVSDSCQK
Ga0307478_109833001	3300031823	Hardwood Forest Soil	AKGVVSHAKMHNLKEDTKDAAKDSGMKKTSTEHGHLKVTDVHMVGDSCQK
Ga0335085_102189494	3300032770	Soil	DAKDAAKDSGMKKSNNEHGHLEVTDVRSVSASCQK
Ga0335069_117635632	3300032893	Soil	KMHNMKEDSKNVASDAGVKKNNAEHGHLTITDLHMISESCQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences