Metagenome Family F063022

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063022
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	64 residues
Representative Sequence	MLPCLIVDRSQEGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH
Number of Associated Samples	77
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.62 %
% of genes near scaffold ends (potentially truncated)	42.31 %
% of genes from short scaffolds (< 2000 bps)	68.46 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (67.692 % of family members)
Environment Ontology (ENVO)	Unclassified (63.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 13.98% Coil/Unstructured: 86.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF07238	PilZ	21.54
PF00313	CSD	3.08
PF01381	HTH_3	3.08
PF10137	TIR-like	2.31
PF13083	KH_4	2.31
PF13435	Cytochrome_C554	1.54
PF00990	GGDEF	1.54
PF13506	Glyco_transf_21	1.54
PF13328	HD_4	0.77
PF04366	Ysc84	0.77
PF07676	PD40	0.77
PF13560	HTH_31	0.77
PF13031	DUF3892	0.77
PF00589	Phage_integrase	0.77
PF08308	PEGA	0.77
PF02954	HTH_8	0.77
PF01609	DDE_Tnp_1	0.77
PF13545	HTH_Crp_2	0.77
PF05593	RHS_repeat	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.77
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.77
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.77
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.77
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.77
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.77
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.77 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.62 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Unclassified	root	N/A	3.85 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	3.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10023363	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300002907\|JGI25613J43889_10076342	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300002908\|JGI25382J43887_10190909	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300005167\|Ga0066672_10069503	All Organisms → cellular organisms → Bacteria → Acidobacteria	2077	Open in IMG/M
3300005171\|Ga0066677_10588010	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300005176\|Ga0066679_10089343	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300005179\|Ga0066684_10045694	All Organisms → cellular organisms → Bacteria	2485	Open in IMG/M
3300005180\|Ga0066685_10123052	All Organisms → cellular organisms → Bacteria → Acidobacteria	1748	Open in IMG/M
3300005451\|Ga0066681_10275430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300005554\|Ga0066661_10160315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1380	Open in IMG/M
3300005554\|Ga0066661_10712612	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300005586\|Ga0066691_10640511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300006031\|Ga0066651_10335345	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300006173\|Ga0070716_100365384	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300006791\|Ga0066653_10002392	All Organisms → cellular organisms → Bacteria → Acidobacteria	5662	Open in IMG/M
3300006797\|Ga0066659_10445639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300006804\|Ga0079221_10378380	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300006806\|Ga0079220_10184849	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300007255\|Ga0099791_10554535	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300007258\|Ga0099793_10013688	All Organisms → cellular organisms → Bacteria → Acidobacteria	3208	Open in IMG/M
3300007265\|Ga0099794_10140929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300009038\|Ga0099829_10200380	All Organisms → cellular organisms → Bacteria → Acidobacteria	1615	Open in IMG/M
3300009038\|Ga0099829_10453723	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300009088\|Ga0099830_10274644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300009088\|Ga0099830_10681992	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300009089\|Ga0099828_10111950	All Organisms → cellular organisms → Bacteria → Acidobacteria	2374	Open in IMG/M
3300009089\|Ga0099828_10146283	All Organisms → cellular organisms → Bacteria → Acidobacteria	2085	Open in IMG/M
3300009089\|Ga0099828_10239176	All Organisms → cellular organisms → Bacteria → Acidobacteria	1626	Open in IMG/M
3300010336\|Ga0134071_10388184	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300011269\|Ga0137392_10180463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300011269\|Ga0137392_10303363	All Organisms → cellular organisms → Bacteria → Acidobacteria	1320	Open in IMG/M
3300011269\|Ga0137392_10720627	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300011269\|Ga0137392_11015795	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300011270\|Ga0137391_10276909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300011270\|Ga0137391_10590167	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300011271\|Ga0137393_10071509	All Organisms → cellular organisms → Bacteria → Acidobacteria	2768	Open in IMG/M
3300011271\|Ga0137393_11748263	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300012096\|Ga0137389_10003927	All Organisms → cellular organisms → Bacteria → Acidobacteria	9339	Open in IMG/M
3300012096\|Ga0137389_10578925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300012189\|Ga0137388_10270974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300012189\|Ga0137388_10314675	All Organisms → cellular organisms → Bacteria → Acidobacteria	1438	Open in IMG/M
3300012189\|Ga0137388_10769580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300012189\|Ga0137388_10977349	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300012198\|Ga0137364_10374151	All Organisms → cellular organisms → Bacteria → Acidobacteria	1064	Open in IMG/M
3300012202\|Ga0137363_10266882	All Organisms → cellular organisms → Bacteria → Acidobacteria	1396	Open in IMG/M
3300012202\|Ga0137363_10905172	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300012202\|Ga0137363_10933356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	737	Open in IMG/M
3300012202\|Ga0137363_11051914	Not Available	692	Open in IMG/M
3300012202\|Ga0137363_11753371	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012203\|Ga0137399_10024122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4054	Open in IMG/M
3300012203\|Ga0137399_10529575	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300012205\|Ga0137362_10086684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2620	Open in IMG/M
3300012205\|Ga0137362_10375650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300012205\|Ga0137362_10566316	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300012205\|Ga0137362_10597733	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300012349\|Ga0137387_11109739	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300012351\|Ga0137386_10825975	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300012361\|Ga0137360_10869374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	777	Open in IMG/M
3300012361\|Ga0137360_11005731	Not Available	719	Open in IMG/M
3300012361\|Ga0137360_11548174	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012362\|Ga0137361_10015586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5616	Open in IMG/M
3300012362\|Ga0137361_10116429	All Organisms → cellular organisms → Bacteria → Acidobacteria	2349	Open in IMG/M
3300012362\|Ga0137361_10518470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300012362\|Ga0137361_10836046	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300012362\|Ga0137361_11803128	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012363\|Ga0137390_10113858	All Organisms → cellular organisms → Bacteria → Acidobacteria	2677	Open in IMG/M
3300012363\|Ga0137390_10192734	All Organisms → cellular organisms → Bacteria	2024	Open in IMG/M
3300012363\|Ga0137390_11897041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	524	Open in IMG/M
3300012582\|Ga0137358_10008358	All Organisms → cellular organisms → Bacteria → Acidobacteria	6360	Open in IMG/M
3300012582\|Ga0137358_10350807	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300012683\|Ga0137398_10003577	All Organisms → cellular organisms → Bacteria → Acidobacteria	6945	Open in IMG/M
3300012683\|Ga0137398_10403145	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300012683\|Ga0137398_10455281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	876	Open in IMG/M
3300012683\|Ga0137398_10740348	Not Available	685	Open in IMG/M
3300012683\|Ga0137398_10949769	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300012685\|Ga0137397_10020394	All Organisms → cellular organisms → Bacteria → Acidobacteria	4652	Open in IMG/M
3300012917\|Ga0137395_10831179	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300012918\|Ga0137396_10005743	All Organisms → cellular organisms → Bacteria → Proteobacteria	7235	Open in IMG/M
3300012918\|Ga0137396_10095678	All Organisms → cellular organisms → Bacteria → Acidobacteria	2113	Open in IMG/M
3300012918\|Ga0137396_10395480	Not Available	1024	Open in IMG/M
3300012918\|Ga0137396_10581132	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300012923\|Ga0137359_11450735	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012924\|Ga0137413_10570409	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300012925\|Ga0137419_10104606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1966	Open in IMG/M
3300012925\|Ga0137419_10448178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300012929\|Ga0137404_10037181	All Organisms → cellular organisms → Bacteria	3648	Open in IMG/M
3300012977\|Ga0134087_10027096	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300015054\|Ga0137420_1089007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1411	Open in IMG/M
3300015054\|Ga0137420_1255791	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300015054\|Ga0137420_1262941	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300015054\|Ga0137420_1475471	All Organisms → cellular organisms → Bacteria → Acidobacteria	2063	Open in IMG/M
3300015241\|Ga0137418_10012953	All Organisms → cellular organisms → Bacteria	7705	Open in IMG/M
3300015241\|Ga0137418_10238635	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300015245\|Ga0137409_10022592	All Organisms → cellular organisms → Bacteria → Acidobacteria	6170	Open in IMG/M
3300015245\|Ga0137409_10308822	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300015264\|Ga0137403_10270251	All Organisms → cellular organisms → Bacteria → Acidobacteria	1604	Open in IMG/M
3300017654\|Ga0134069_1026360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1768	Open in IMG/M
3300018431\|Ga0066655_10000415	All Organisms → cellular organisms → Bacteria → Acidobacteria	13921	Open in IMG/M
3300018431\|Ga0066655_10055177	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300018468\|Ga0066662_12156292	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300018468\|Ga0066662_12950345	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300018482\|Ga0066669_10667022	All Organisms → cellular organisms → Bacteria → Acidobacteria	915	Open in IMG/M
3300020170\|Ga0179594_10037154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1588	Open in IMG/M
3300021086\|Ga0179596_10313531	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300021178\|Ga0210408_10019832	All Organisms → cellular organisms → Bacteria	5375	Open in IMG/M
3300024330\|Ga0137417_1007044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3369	Open in IMG/M
3300024330\|Ga0137417_1222157	All Organisms → cellular organisms → Bacteria → Acidobacteria	1923	Open in IMG/M
3300025939\|Ga0207665_10085160	All Organisms → cellular organisms → Bacteria → Acidobacteria	2182	Open in IMG/M
3300026297\|Ga0209237_1113452	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300026309\|Ga0209055_1089568	All Organisms → cellular organisms → Bacteria → Acidobacteria	1255	Open in IMG/M
3300026310\|Ga0209239_1059531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1698	Open in IMG/M
3300026319\|Ga0209647_1340275	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300026323\|Ga0209472_1018695	All Organisms → cellular organisms → Bacteria → Acidobacteria	3342	Open in IMG/M
3300026342\|Ga0209057_1000250	All Organisms → cellular organisms → Bacteria	49585	Open in IMG/M
3300026547\|Ga0209156_10035733	All Organisms → cellular organisms → Bacteria → Acidobacteria	2766	Open in IMG/M
3300026551\|Ga0209648_10058553	All Organisms → cellular organisms → Bacteria	3275	Open in IMG/M
3300026551\|Ga0209648_10077214	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300026551\|Ga0209648_10167369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1717	Open in IMG/M
3300026551\|Ga0209648_10398654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300026555\|Ga0179593_1144857	All Organisms → cellular organisms → Bacteria → Acidobacteria	3251	Open in IMG/M
3300026557\|Ga0179587_10793145	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300027643\|Ga0209076_1001406	All Organisms → cellular organisms → Bacteria → Acidobacteria	4912	Open in IMG/M
3300027643\|Ga0209076_1002550	All Organisms → cellular organisms → Bacteria → Acidobacteria	3972	Open in IMG/M
3300027846\|Ga0209180_10045252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2415	Open in IMG/M
3300027846\|Ga0209180_10057664	All Organisms → cellular organisms → Bacteria → Acidobacteria	2155	Open in IMG/M
3300027875\|Ga0209283_10191286	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300027903\|Ga0209488_10048274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3129	Open in IMG/M
3300031720\|Ga0307469_10436109	Not Available	1130	Open in IMG/M
3300031753\|Ga0307477_10016416	All Organisms → cellular organisms → Bacteria	5052	Open in IMG/M
3300031754\|Ga0307475_11101982	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.69%
Loam	Environmental → Terrestrial → Soil → Loam	2.31%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	70.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	67.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_100233632	3300002907	Grasslands Soil	MLPCLIVDRSQEGFRLRGNFILKRGQLVELIVDDPVDSVRCEVIWVGRAGSELEGQAGVQTIGH*
JGI25613J43889_100763421	3300002907	Grasslands Soil	IVDXSQXGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEMGLQAIAH
JGI25382J43887_101909091	3300002908	Grasslands Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK*
Ga0066672_100695034	3300005167	Soil	MFPCLIVDRSQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVGEVGLQIVGKMTFGLRTRSR*
Ga0066677_105880102	3300005171	Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEV
Ga0066679_100893436	3300005176	Soil	LRGVQKMFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMTCEVIWTGKAGSEVMEVGLQTVGK*
Ga0066684_100456941	3300005179	Soil	IVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK*
Ga0066685_101230522	3300005180	Soil	MFPCLIVDRSQEGFRLRGSFRLKRGQLVELVLDDPVDSIRCEVIWIGKGGLEQAGEVGLQTVGK*
Ga0066681_102754303	3300005451	Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEAVEVGLQTVGK*
Ga0066661_101603152	3300005554	Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVQCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0066661_107126121	3300005554	Soil	LRGVQKMFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK*
Ga0066691_106405112	3300005586	Soil	SQEGFRLRGNFRLRRGQLVEIVLDDPVDSLRCEVVWTGKTQLEQVGEVGLQIVGK*
Ga0066651_103353451	3300006031	Soil	GVQKMFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK*
Ga0070716_1003653841	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFPCLIVDRSHEGFRLRGNFNLRRGQIVELITDDPEDSVRCQVIWVGKAGSQQEGQAGVQTVGK*
Ga0066653_100023923	3300006791	Soil	MFLCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK*
Ga0066659_104456393	3300006797	Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMTCEVIWTGKAGSEVMEVGLQTVGK*
Ga0079221_103783801	3300006804	Agricultural Soil	AFVINLGGVQRLLPCLIVDRSEVGFRLQGSFRLKRGQLVELITEEDAPVDAVLCQVIWIGKAGSKQAGEMGLHTVRK*
Ga0079220_101848492	3300006806	Agricultural Soil	MFPCLIVDRSREGFRLRGEFKLRRGQFVELVVDELDSVRCEVIWIGKPGSVQAGEAGLQ
Ga0099791_105545352	3300007255	Vadose Zone Soil	GFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0099793_100136884	3300007258	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILKRGQLVELIVDDPVDSVRCEVIWVGRAGSKLEGQAGVQTIGH*
Ga0099794_101409292	3300007265	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGRAGSQEEGQVGVQTVGK*
Ga0099829_102003803	3300009038	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWIGRAGSQQEGQAGVQTVGK*
Ga0099829_104537231	3300009038	Vadose Zone Soil	EGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIGH*
Ga0099830_102746443	3300009088	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0099830_106819921	3300009088	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGRAGSQQEGQAGVQTVGK*
Ga0099828_101119502	3300009089	Vadose Zone Soil	MHPCLIVDRSQEGFRLRCDFRLRRAQLVELVVENPVDSVRCEVIWVGKAGSEQAGEAGLQTAGK*
Ga0099828_101462834	3300009089	Vadose Zone Soil	LRGSFKLRRGQLVELVVDDPTMDSVRCEVIWIGKAGSEQAEEIGLQATAR*
Ga0099828_102391762	3300009089	Vadose Zone Soil	MHPCLIVDRSQEGFRLRRDFRLRRGQLVELLVDDPVDSVRCEVIWIGKAGSEQAGEVGLQTVGK*
Ga0134071_103881841	3300010336	Grasslands Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQT
Ga0137392_101804632	3300011269	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILKCGQLVELIVDDPVDSVRCEVIWVGRAGSELEGQAGVQTIGH*
Ga0137392_103033632	3300011269	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIGH*
Ga0137392_107206272	3300011269	Vadose Zone Soil	MFPCLIIDRSQEGFRLRGNFSLKRGQIVELIADDPVDSVRCEVIWVGKPESQQVGEVGLQTVDK*
Ga0137392_110157952	3300011269	Vadose Zone Soil	MVPCLVVDRSHEGFRLRGDFKLRRGQLVELVLDDPVDSVRCEVMWVGRARSEQEEQVGLQTVGK*
Ga0137391_102769091	3300011270	Vadose Zone Soil	MLPCLIVDKSQEGFRLRASFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137391_105901671	3300011270	Vadose Zone Soil	FRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIGH*
Ga0137393_100715094	3300011271	Vadose Zone Soil	MHPCLIVDRSQEGFRLRCDFRLRRGQLVELVVDDPVNSVRCEVIWIGSAGSQQAGEAGLHARSEK*
Ga0137393_117482631	3300011271	Vadose Zone Soil	LIVDRSQEGFRLRGNFILKRGQLVELIVDDPVDSVRCEVIWVGRAGSELEGQAGVQTIGH
Ga0137389_1000392712	3300012096	Vadose Zone Soil	MHPCLIVDRSQEGFRLRCDFRLRRGQLVELVVENPVDSVRCEVIWVGKAGSEQAGEAGLQTAGK*
Ga0137389_105789253	3300012096	Vadose Zone Soil	CLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWIGRAGSKQEGQAGVQTVGK*
Ga0137388_102709744	3300012189	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137388_103146754	3300012189	Vadose Zone Soil	PCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVILIGKVGSEQAEEVGLQATAR*
Ga0137388_107695801	3300012189	Vadose Zone Soil	EGFRLKGNFRLKRGQIVEVIVADDPVDSVRCEVIWVGRAGSQQEGQAGVQTVGK*
Ga0137388_109773491	3300012189	Vadose Zone Soil	VIDRSGGQKMFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWIGRAGSKQEGQAGVQTVGK*
Ga0137364_103741512	3300012198	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFRLRRGQLVELVVDDPVDSVRCEVIWIGRAVSGQAGEAGLQARSEK*
Ga0137363_102668822	3300012202	Vadose Zone Soil	MFPCLIVDRSQEGFRSRGNFRLRRGQLVELVFDDPVDSVPCEVVSTGKAGSEEVVEAGLQTVGK*
Ga0137363_109051721	3300012202	Vadose Zone Soil	MFPCLIVDRSKEGFRLKGNFRLRRGQLVELVLDDPVDSVRCEVVWTGKARSEVMEAGLQT
Ga0137363_109333561	3300012202	Vadose Zone Soil	SQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137363_110519141	3300012202	Vadose Zone Soil	KMLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVWCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137363_117533711	3300012202	Vadose Zone Soil	SQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKVGSEQAEEVGLQATAR*
Ga0137399_100241221	3300012203	Vadose Zone Soil	IVDKSQEGFRLRGSFKLRRGQLVELVVEDPMMDSVRCEVIWIGKAGSEQAEEVGLQATAR
Ga0137399_105295752	3300012203	Vadose Zone Soil	MLPCLIVDKSQAGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEMGLQAIAH*
Ga0137362_100866841	3300012205	Vadose Zone Soil	PCLIVDKSQEGFRLRGSFKLRRGQLVELVVEDPMMDSVWCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137362_103756502	3300012205	Vadose Zone Soil	MFHCLIVDRCQEGFRLRGKFRLRRGQLVELVLDDPVDSVPCEVVSTGKAGSEEVVEAGLQTVGK*
Ga0137362_105663161	3300012205	Vadose Zone Soil	MFACLIVDRSQEGFRLRGNFRLRRGQLVELVLDDPVDSVPCGVVWTGKAGSEEVVEAGLQTVGK*
Ga0137362_105977332	3300012205	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFRLKRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137387_111097391	3300012349	Vadose Zone Soil	MFPCLIVDKSKDGFRLKGDFRLRRGQLVELVLDDPVDSVPCEVVWTGKAGSEEVVEGELQTVGK*
Ga0137386_108259751	3300012351	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVRWVGRTGSEQEGQVGVQIVGK*
Ga0137360_108693741	3300012361	Vadose Zone Soil	IVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH
Ga0137360_110057312	3300012361	Vadose Zone Soil	PCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVWCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137360_115481741	3300012361	Vadose Zone Soil	LPCLIVDKSQEGFRLRGSFKLRRGQLVELVVEDPMMDSVRCEVIWIGKAGSEQAEEVGLQATAR*
Ga0137361_1001558612	3300012362	Vadose Zone Soil	RASLVIDRSGGQKMFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGRAGSQQEGQAGVQTVGK*
Ga0137361_101164296	3300012362	Vadose Zone Soil	MFPCLIVDRSKEGFRLKGNFRLRRGQLVELVLDDPVDSVRCEVVWTGKARSEVMEAGLQTVGK*
Ga0137361_105184702	3300012362	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFRLRRRQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137361_108360462	3300012362	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGSFKLSHGQLVELVVDNPVDSVPCEVIWVGRAGSREAGEAGLQTVGK*
Ga0137361_118031281	3300012362	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137390_101138583	3300012363	Vadose Zone Soil	MFPCLIIDRSQEGFRLRGNFSLKRGQIVELIADDPVDSVRCEVIWVGKPESQQVGEVGLQTVGK*
Ga0137390_101927341	3300012363	Vadose Zone Soil	SQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137390_118970412	3300012363	Vadose Zone Soil	SQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIGH*
Ga0137358_100083581	3300012582	Vadose Zone Soil	INLSGIQKMLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVWCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137358_103508072	3300012582	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILKRGQLVELIVDDPVDSVRCEVIWVGRAGSELEGQAGVQTI
Ga0137398_100035775	3300012683	Vadose Zone Soil	MFPCLIIDRSQEGFRLRGNFSLKRGQIVELIADDPEDSVRCEVIWVGRAGSQQEGQAGVQTVGK*
Ga0137398_104031452	3300012683	Vadose Zone Soil	MFPCLIVDKSQDGFRLKGNFRLRRGQLVELVLDDPVDSVRCEVIWTGKAGSEVVEAGLQTVGK*
Ga0137398_104552812	3300012683	Vadose Zone Soil	MLLCLIVDKSQEGFRLRASFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQATAH*
Ga0137398_107403481	3300012683	Vadose Zone Soil	RLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137398_109497692	3300012683	Vadose Zone Soil	VINLSGIQKMLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDPVRCEVIWIGKVGSEQAEEVGLQATAR*
Ga0137397_100203944	3300012685	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILKRGQLVELIVDHPVDSVRCEVIWVGRAGSKLEGQAGVQTIGH*
Ga0137395_108311792	3300012917	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGRAGSQQEGQAGLQTVGK*
Ga0137396_100057439	3300012918	Vadose Zone Soil	MFLCLIVERSNEGFRLRGNFKLKRGQIVELIADDPTDSVRCEVIWFGKPGSQQLGEAGLQMRPGK
Ga0137396_100956784	3300012918	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137396_103954801	3300012918	Vadose Zone Soil	NRSHDGFGLRGGFRLKRGQLIELIVEDDAVDSVRCEVIWTGRAGSQQAGEAGLQAVAK*
Ga0137396_105811322	3300012918	Vadose Zone Soil	MFPCLIVDRSQDGFRLKGNFRLRRGQLVELVLDDPVDSLRCEVIWTGKAGSEVLEAGLQTVGK*
Ga0137359_114507351	3300012923	Vadose Zone Soil	KMLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVEDPMMDSVRCEVIWIGKAGSEQAEEVGLQATAR*
Ga0137413_105704092	3300012924	Vadose Zone Soil	MFPCLIIDRSQEGFRLRGNFSLKRGQIVELIADDPEDSVRCEVIWVGRAGSQQEGQAGV*
Ga0137419_101046062	3300012925	Vadose Zone Soil	MFPCLIVDRSQEGFRLRGNFSLRRGQIIELIADDPEDSVRCEVIWVGRAGSQQEGQAGVQTVGK*
Ga0137419_104481781	3300012925	Vadose Zone Soil	MFPCLIVDRSHEGFRLRGGFRLKRGQLIELIVEDDPVDSVRCEVIWTGRAGSQQAGEAGLQAVAK*
Ga0137404_100371812	3300012929	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGRAGSQQEGQAGVQTVGK*
Ga0134087_100270962	3300012977	Grasslands Soil	MFPCLILDRSQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVWEVGLQIVGKMTFGLRTRSR*
Ga0137420_10890073	3300015054	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVEDPMMDSVRCEVIWIGKAGSEQAEEVGLQATAR*
Ga0137420_12557911	3300015054	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137420_12629411	3300015054	Vadose Zone Soil	MLPCLIVDKSQAGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137420_14754713	3300015054	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEMGLQAIAH*
Ga0137418_1001295314	3300015241	Vadose Zone Soil	GFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH*
Ga0137418_102386351	3300015241	Vadose Zone Soil	GFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQATAR*
Ga0137409_100225926	3300015245	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILQRGQLVELIVDHPVDSVRCEVIWVGRAGSKLEGQAGVQTIGH*
Ga0137409_103088223	3300015245	Vadose Zone Soil	MLPCRIVEKSQAGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEIGLQAIAH*
Ga0137403_102702513	3300015264	Vadose Zone Soil	MFPCLIVDRSQDGFRLKGNFRLRRRLLVELVVDDPVDSVRCEVIWVGRTGSEQEGQVGVQTVGK*
Ga0134069_10263602	3300017654	Grasslands Soil	MFPCLIVDRLQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVGEVGLQIVGKMTFGLRTRSR
Ga0066655_1000041512	3300018431	Grasslands Soil	MFPCLIVDRSQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVGEVGLQIVGKMTFGLRTRSR
Ga0066655_100551774	3300018431	Grasslands Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK
Ga0066662_121562921	3300018468	Grasslands Soil	IVDRSQEGLRLKGNFSLRRGQLVETVLDDPVDSLQCEVVWTGKTELEQVGEVGLQIVGK
Ga0066662_129503452	3300018468	Grasslands Soil	IVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEVMEVGLQTVGK
Ga0066669_106670221	3300018482	Grasslands Soil	MFPCLIVDRSQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVGEVGLQIVGKLTFGL
Ga0179594_100371543	3300020170	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILKRGQLVELIVDDPVDSVRCEVIWVGRAGSELEGQAGVQTIGH
Ga0179596_103135311	3300021086	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEIGLQAIAH
Ga0210408_100198324	3300021178	Soil	MSPCLIVDSSQEGFRLRGSFNLRSGQLVELIVNDPVDSVRCEVIWVGKPGYKQEGEAGLQTVRNKTVGAED
Ga0137417_10070441	3300024330	Vadose Zone Soil	MFLCLIVERSNEGFRLRGNFKLKRGQIVELIADDPTDSVRCEVIWFGKPGSQQLGEAGGGGFANEARKR
Ga0137417_12221571	3300024330	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH
Ga0207665_100851603	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFPCLIVDRSHEGFRLRGNFNLRRGQIVELITDDPEDSVRCQVIWVGKAGSQQEGQAGVQTVGK
Ga0209237_11134521	3300026297	Grasslands Soil	PCLIVDRSQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVGEVGLQIVGKMTFGLRTRSR
Ga0209055_10895682	3300026309	Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVQCEVIWIGKAGSEQAEEIGLQAIAH
Ga0209239_10595311	3300026310	Grasslands Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMTCEVIWTGKAGSEVMEVGLQTVGK
Ga0209647_13402752	3300026319	Grasslands Soil	GVQKMFACLIVDRSQEGFRLRGNFRLRRGQLVELVLDDPVDSVPCGVVWTGKAGSEEVVEAGLQTVGK
Ga0209472_10186953	3300026323	Soil	MFPCLIVDKSQAGFRLKGNFRLRRGQLVELVLDDPMDSMRCEVIWTGKAGSEAVEVGLQTVGK
Ga0209057_10002501	3300026342	Soil	MFPCLIVDRSQEGFRLRGSFRLKRGQLVEIVLDDPVDSVQCEVEWTGKTELEQVGEVGLQIVGKM
Ga0209156_100357331	3300026547	Soil	DRSQEGFRLRGSFRLKRGQLVELVLDDPVDSIRCEVIWIGKGGLEQAGEVGLQTVGK
Ga0209648_100585531	3300026551	Grasslands Soil	IVDRAQEGFRLRGNFRLKRGQLIELILDDPVDSVRCEVIWVGKPESQQVGEVGLQTVGK
Ga0209648_100772141	3300026551	Grasslands Soil	MLLCLIVDKSQEGFRLRGSFRLRRGQLVELVVDDPMMDSVRREAIWIGKAGSEQAEEVGLQATAH
Ga0209648_101673695	3300026551	Grasslands Soil	QEGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIGH
Ga0209648_103986543	3300026551	Grasslands Soil	QGGGQKMFPCLIVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGKPESQQVGEAGLHAVGR
Ga0179593_11448573	3300026555	Vadose Zone Soil	MLPCLILDVSQEGFRLRGDFRLRRGQLVELIAEDAPLSSVQCEVIWSGKAGSGHEGEVGLQAVVR
Ga0179587_107931451	3300026557	Vadose Zone Soil	MFPCLVVDRSHEGFRLRGGFRLKRGQLIELIVEDDPLDSVQCEVIWTGRARSQQEGEAGLQAVAK
Ga0209076_10014062	3300027643	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGNFILKRGQLVELIVDDPVDSVRCEVIWVGRAGSKLEGQAGVQTIGH
Ga0209076_10025503	3300027643	Vadose Zone Soil	MLPCLIVDRSQEGFRLRGSFRLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH
Ga0209180_100452526	3300027846	Vadose Zone Soil	MLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIGH
Ga0209180_100576641	3300027846	Vadose Zone Soil	CLIVDKSQEGFRLRASFKLRRGQLVELVVDDPMMDSVRCEVIWIGKAGSEQAEEVGLQAIAH
Ga0209283_101912863	3300027875	Vadose Zone Soil	MHPCLIVDRSQEGFRLRRDFRLRRGQLVELLVDDPVDSVRCEVIWIGKAGSEQAGEVGLQTVGK
Ga0209488_100482745	3300027903	Vadose Zone Soil	MPASLVINLSGIQKMLPCLIVDKSQEGFRLRGSFKLRRGQLVELVVDDPMMDPVRCEVIWIGKVGSEQAEEVGLQATAR
Ga0307469_104361092	3300031720	Hardwood Forest Soil	QEGFKLRGSFKLRHGQLVELVVDEPVDSVPCEVIWVGTAGSRQEGEAGLQTVG
Ga0307477_100164161	3300031753	Hardwood Forest Soil	MFPCLLVDRSQEGFRLRGNFSLRRGQIVELIADDPEDSVRCEVIWVGRAGSRQEGQAGVQTVGK
Ga0307475_111019821	3300031754	Hardwood Forest Soil	MFPCLIVDRSNEGGFRLRGNFRLGRGQIVELLADVDSVRCEVIWTSKAGSEQTGEAGLLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063022

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences