Metagenome / Metatranscriptome Family F062965

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062965
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	68 residues
Representative Sequence	EEVRDLGNGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTTYEVDEARAAAERLARERG
Number of Associated Samples	115
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.15 %
% of genes near scaffold ends (potentially truncated)	94.62 %
% of genes from short scaffolds (< 2000 bps)	96.92 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (50.769 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.769 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.15% β-sheet: 34.04% Coil/Unstructured: 46.81%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF12680	SnoaL_2	49.23
PF00196	GerE	2.31
PF00441	Acyl-CoA_dh_1	2.31
PF08327	AHSA1	1.54
PF07366	SnoaL	0.77
PF00171	Aldedh	0.77
PF07690	MFS_1	0.77
PF08240	ADH_N	0.77
PF07883	Cupin_2	0.77
PF08241	Methyltransf_11	0.77
PF01872	RibD_C	0.77
PF00296	Bac_luciferase	0.77
PF01850	PIN	0.77
PF01883	FeS_assembly_P	0.77
PF00211	Guanylate_cyc	0.77
PF01909	NTP_transf_2	0.77
PF08669	GCV_T_C	0.77
PF02371	Transposase_20	0.77
PF02541	Ppx-GppA	0.77
PF03632	Glyco_hydro_65m	0.77
PF03167	UDG	0.77
PF00583	Acetyltransf_1	0.77
PF00923	TAL_FSA	0.77
PF10590	PNP_phzG_C	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.31
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.54
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.77
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.77
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.77
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.77
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.77
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.77
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.77
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.77
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.77
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
All Organisms	root	All Organisms	49.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
cellular organisms	root	All Organisms → cellular organisms	48.46 %
Viruses	superkingdom	All Organisms → Viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.23 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.00 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.23 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.54 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.77 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.15 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	2.31 %
Chloroflexi bacterium RBG_16_52_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_52_11	0.77 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.69 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	4.62 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	2.31 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.77 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.77 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.77 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.77 %
Chloroflexi bacterium RBG_16_52_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_52_11	0.77 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.69 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	4.62 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	2.31 %
Crateriforma	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma	0.77 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.77 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.77 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.77 %
Chloroflexi bacterium RBG_16_52_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_52_11	0.77 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.69 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	4.62 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.31 %
Crateriforma conspicua	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua	0.77 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.77 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.77 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.77 %
Chloroflexi bacterium RBG_16_52_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_52_11	0.77 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.69 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	4.62 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.31 %
Conexibacter sp. DBS9H8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	0.77 %
Crateriforma conspicua	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua	0.77 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.77 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.77 %
Chloroflexi bacterium RBG_16_52_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_52_11	0.77 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118312656	Not Available	548	Open in IMG/M
3300004081\|Ga0063454_101479590	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua	580	Open in IMG/M
3300004091\|Ga0062387_100743594	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300004092\|Ga0062389_100523888	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300004092\|Ga0062389_101914515	Not Available	771	Open in IMG/M
3300004092\|Ga0062389_102785682	Not Available	653	Open in IMG/M
3300004152\|Ga0062386_100906156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	729	Open in IMG/M
3300004152\|Ga0062386_101103836	Not Available	658	Open in IMG/M
3300004157\|Ga0062590_102678441	Not Available	531	Open in IMG/M
3300004643\|Ga0062591_100217488	Not Available	1422	Open in IMG/M
3300005093\|Ga0062594_100311906	Not Available	1205	Open in IMG/M
3300005167\|Ga0066672_10762210	Not Available	613	Open in IMG/M
3300005180\|Ga0066685_10286543	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300005184\|Ga0066671_10764073	Not Available	620	Open in IMG/M
3300005187\|Ga0066675_10895095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300005329\|Ga0070683_100714704	Not Available	960	Open in IMG/M
3300005343\|Ga0070687_100863276	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005434\|Ga0070709_10871201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	711	Open in IMG/M
3300005437\|Ga0070710_10646565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300005444\|Ga0070694_100295413	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1240	Open in IMG/M
3300005459\|Ga0068867_102068609	Not Available	539	Open in IMG/M
3300005459\|Ga0068867_102178676	Not Available	526	Open in IMG/M
3300005471\|Ga0070698_102051108	Not Available	525	Open in IMG/M
3300005530\|Ga0070679_101926362	Not Available	540	Open in IMG/M
3300005552\|Ga0066701_10710165	Not Available	603	Open in IMG/M
3300005554\|Ga0066661_10761353	Not Available	567	Open in IMG/M
3300005558\|Ga0066698_10555051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300005587\|Ga0066654_10583711	Not Available	617	Open in IMG/M
3300005614\|Ga0068856_102220796	Not Available	558	Open in IMG/M
3300005843\|Ga0068860_100449870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1281	Open in IMG/M
3300005844\|Ga0068862_101361716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300006046\|Ga0066652_100529766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300006175\|Ga0070712_100315571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1270	Open in IMG/M
3300006175\|Ga0070712_100622636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300006791\|Ga0066653_10463682	Not Available	644	Open in IMG/M
3300006844\|Ga0075428_102484916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300006847\|Ga0075431_101188442	Not Available	726	Open in IMG/M
3300006876\|Ga0079217_10350579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M
3300009012\|Ga0066710_104636587	Not Available	514	Open in IMG/M
3300009094\|Ga0111539_10812862	Not Available	1088	Open in IMG/M
3300009094\|Ga0111539_12334855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300009098\|Ga0105245_11813836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300009137\|Ga0066709_102628587	Not Available	673	Open in IMG/M
3300009137\|Ga0066709_104547056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300009156\|Ga0111538_12588342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	636	Open in IMG/M
3300009156\|Ga0111538_14052926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	506	Open in IMG/M
3300009789\|Ga0126307_10031370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4088	Open in IMG/M
3300009840\|Ga0126313_10214083	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300010037\|Ga0126304_11046103	Not Available	557	Open in IMG/M
3300010039\|Ga0126309_10084058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1605	Open in IMG/M
3300010044\|Ga0126310_11163509	Not Available	617	Open in IMG/M
3300010301\|Ga0134070_10372341	Not Available	558	Open in IMG/M
3300010333\|Ga0134080_10327619	Not Available	693	Open in IMG/M
3300010396\|Ga0134126_10014121	All Organisms → cellular organisms → Bacteria	10085	Open in IMG/M
3300010876\|Ga0126361_10776602	Not Available	507	Open in IMG/M
3300010880\|Ga0126350_10462716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300012201\|Ga0137365_10794382	Not Available	691	Open in IMG/M
3300012203\|Ga0137399_10266854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1407	Open in IMG/M
3300012203\|Ga0137399_11781827	Not Available	504	Open in IMG/M
3300012208\|Ga0137376_11597859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300012208\|Ga0137376_11682701	Not Available	525	Open in IMG/M
3300012212\|Ga0150985_111837548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300012683\|Ga0137398_10754492	Not Available	678	Open in IMG/M
3300012917\|Ga0137395_10924231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300012960\|Ga0164301_10593879	Not Available	816	Open in IMG/M
3300012960\|Ga0164301_10803826	Not Available	719	Open in IMG/M
3300012960\|Ga0164301_11667989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300012961\|Ga0164302_11768604	Not Available	521	Open in IMG/M
3300012977\|Ga0134087_10452296	Not Available	636	Open in IMG/M
3300012986\|Ga0164304_11357347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	582	Open in IMG/M
3300012986\|Ga0164304_11452778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012988\|Ga0164306_10929179	Not Available	711	Open in IMG/M
3300012989\|Ga0164305_11338628	Not Available	628	Open in IMG/M
3300012989\|Ga0164305_12005326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300013308\|Ga0157375_13586069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	516	Open in IMG/M
3300014326\|Ga0157380_10897207	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300015164\|Ga0167652_1004609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3305	Open in IMG/M
3300015371\|Ga0132258_11026993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2083	Open in IMG/M
3300015373\|Ga0132257_102971272	Not Available	618	Open in IMG/M
3300016294\|Ga0182041_10422924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300016319\|Ga0182033_10643096	Not Available	924	Open in IMG/M
3300017965\|Ga0190266_10942518	Not Available	571	Open in IMG/M
3300017970\|Ga0187783_11332568	Not Available	517	Open in IMG/M
3300018058\|Ga0187766_11116945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	567	Open in IMG/M
3300018066\|Ga0184617_1211665	Not Available	578	Open in IMG/M
3300018071\|Ga0184618_10265380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300018076\|Ga0184609_10432178	Not Available	608	Open in IMG/M
3300018081\|Ga0184625_10320021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300018433\|Ga0066667_12277557	Not Available	506	Open in IMG/M
3300018469\|Ga0190270_12877543	Not Available	544	Open in IMG/M
3300019356\|Ga0173481_10514055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300021080\|Ga0210382_10167610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300021432\|Ga0210384_10991461	Not Available	742	Open in IMG/M
3300025915\|Ga0207693_10235109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1439	Open in IMG/M
3300025916\|Ga0207663_11287733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300025921\|Ga0207652_11355180	Not Available	614	Open in IMG/M
3300025924\|Ga0207694_10425929	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300025928\|Ga0207700_11052751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	728	Open in IMG/M
3300025939\|Ga0207665_10707512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300025941\|Ga0207711_11987687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	524	Open in IMG/M
3300025942\|Ga0207689_10967131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_52_11	718	Open in IMG/M
3300026045\|Ga0208535_1015675	Not Available	716	Open in IMG/M
3300026294\|Ga0209839_10235994	Not Available	578	Open in IMG/M
3300026300\|Ga0209027_1066253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1344	Open in IMG/M
3300026552\|Ga0209577_10444825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300027388\|Ga0208995_1068988	Not Available	620	Open in IMG/M
3300027824\|Ga0209040_10110000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1545	Open in IMG/M
3300027903\|Ga0209488_11163801	Not Available	522	Open in IMG/M
3300029910\|Ga0311369_11329899	Not Available	548	Open in IMG/M
3300029943\|Ga0311340_11269304	Not Available	589	Open in IMG/M
3300031093\|Ga0308197_10314924	Not Available	582	Open in IMG/M
3300031152\|Ga0307501_10285655	Not Available	503	Open in IMG/M
3300031543\|Ga0318516_10279347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300031680\|Ga0318574_10830628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300031740\|Ga0307468_101365758	Not Available	649	Open in IMG/M
3300031754\|Ga0307475_10568630	Not Available	909	Open in IMG/M
3300031780\|Ga0318508_1146708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300031859\|Ga0318527_10165012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300031893\|Ga0318536_10516908	Not Available	600	Open in IMG/M
3300031896\|Ga0318551_10767158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300031942\|Ga0310916_10550259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	982	Open in IMG/M
3300031962\|Ga0307479_11706248	Not Available	583	Open in IMG/M
3300031995\|Ga0307409_100692085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1018	Open in IMG/M
3300032025\|Ga0318507_10540935	Not Available	507	Open in IMG/M
3300032174\|Ga0307470_11434581	Not Available	571	Open in IMG/M
3300032261\|Ga0306920_103034805	Not Available	633	Open in IMG/M
3300032261\|Ga0306920_103215752	Not Available	611	Open in IMG/M
3300032892\|Ga0335081_11089126	Not Available	922	Open in IMG/M
3300032898\|Ga0335072_11460218	Not Available	587	Open in IMG/M
3300033289\|Ga0310914_11155336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.85%
Host-Associated	Host-Associated	16.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.62%
Plants	Host-Associated → Plants	16.15%
Aquatic	Environmental → Aquatic	9.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.92%
Freshwater	Environmental → Aquatic → Freshwater	6.15%
Sediment	Environmental → Aquatic → Sediment	3.08%
Peat	Environmental → Terrestrial → Peat	1.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.15%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.62%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.54%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026045	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1183126562	3300002568	Soil	EELEFGLEEVRDLGNGVVFAVVVQNGRPAGSGGHLGQREGWVFVWVRDLIARLTISEVDEARAAAERLAVERGQA*
Ga0063454_1014795902	3300004081	Soil	LEFKLEEVHDLGNGVVLAVVVQEGRPAGIAGHLQQREGWVYVWVGGLIARLTISDTDEALEAAGLSE*
Ga0062387_1007435943	3300004091	Bog Forest Soil	VRDLGNGVVFAVVVQNGRPVGSAGHLRQREGWVFVWARGLIAGLTVSEVDEARAAAERLAGERA*
Ga0062389_1005238883	3300004092	Bog Forest Soil	EELEFGVEEVRDLGNEVVFAVVVQNGRPAGSAGHLRQREGWVFVWVGGLIARLSTYEVDEARAAAERLAQERDR*
Ga0062389_1019145151	3300004092	Bog Forest Soil	LEVGLEEVRDLGNGVVFAVVIQNGRLVGSAGQLRQREGWVFVWVRDLIARLTISDIDEARAAAERLAQERG*
Ga0062389_1027856822	3300004092	Bog Forest Soil	YEELEYGLEEVRDLGNGVMFAVIVQNGRLVGSTGHLRQREGWVFVWVRGLVARLTVYEVDEGRAAAERLAEELG*
Ga0062386_1009061563	3300004152	Bog Forest Soil	AYEELDYGLEEVRDLGNGVVFAVVVQNGRPVGSAGHLRQREGWVFVWVRGLIARLTILEVDEARAAAERLAEERG*
Ga0062386_1011038361	3300004152	Bog Forest Soil	DWFDSYETLDFELEEVSDLGNGVVFAVVVQDGRLVGIAGHIRQREGWVYLCVGGLIARLTTYDVDEGRAAAERLAAERE*
Ga0062590_1026784411	3300004157	Soil	KLEDVRDLGSGVVFAVVFQEGVPAGSAGHGRVWQREGWVFLWERGLIARHAVLDTDIDEARAAAEALAESRR*
Ga0062591_1002174881	3300004643	Soil	GVVLAVVLQEARPVGIAGHVQQREGWVYVWVRGLIARLTVFDIDEARAAAERLAESTSRSGPP*
Ga0062594_1003119064	3300005093	Soil	FAVVFQEGVLAGSAGPGRVWQREGWAFLWERGLIALHAVLDTDIDEARAAAERLAESRR*
Ga0066672_107622102	3300005167	Soil	EDVRDLGNGVVFAVVVQEGVPAGSAGHGHFRQREGWVFLWERGLIARLSAYDPDEARAAAERLAESMG*
Ga0066685_102865433	3300005180	Soil	FEELEFKLEEVHDLGNGVVLAVVLQEARPAGIAGHVQQREGWVYVWVGGLIARLTASDIDEARAAAERLAEERG*
Ga0066671_107640731	3300005184	Soil	ALVIQDGRLVGSDDHVRQCEGWVYLCVGGSIARLTTSDIDQARAAAERVAQERG*
Ga0066675_108950951	3300005187	Soil	FAAVRQHGRPTGSIGHVQQREGFVYVWVSLTVRLTIYPYSDIDEARAAAERLAESKG*
Ga0070683_1007147041	3300005329	Corn Rhizosphere	GVVLAVVVQDGRLVGADGHVRQCEGWVYVCEGGSIARLTTREDVDQVRSAAARLAHERG*
Ga0070687_1008632761	3300005343	Switchgrass Rhizosphere	VVIQDGRPVGGDGRLRQREGWVYLCVEGSIARLTTSDVDQARAAAERLAQERG*
Ga0070709_108712011	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LDFELEEVSDLGGGVVFAVVIQDGRLVGSAGRIRQREGWVYLWVGGSIARLTTSDVDQARAAAERLAQERG*
Ga0070710_106465651	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EDWFQAYEEFAVELEEVHDLGNGVVFAVVHQNARPAGSAGRVRQREGWVLVWEEGLTVQMTTYGDIDEARAAAERLAEQRG*
Ga0070694_1002954134	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AVVIQDGRPVGGDGHVRQREGWVYLCVGGSIARLTTSGVDQARAAAERLAQERG*
Ga0068867_1020686091	3300005459	Miscanthus Rhizosphere	YEELEFKLEETHDLGNGVVFAVASQDGRPVGSAGHLRQREGWVFLCARGLIARLTISEIDEAREAMGLSEQDAHSDS*
Ga0068867_1021786761	3300005459	Miscanthus Rhizosphere	GGGVVFAVVIQDGRPVGGDGRLRQREGWVYLWAGGSIARLTTSEVDQARAAAERLAQERE
Ga0070698_1020511082	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LEEVRHLGGGVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSIARLTTSDVDQARAAAERLAQERG*
Ga0070679_1019263622	3300005530	Corn Rhizosphere	GRLVGSDGHVRQREGWVYLCVGGSIARLTTSDVDQGRAAAERLVGLCSQW*
Ga0066701_107101651	3300005552	Soil	VVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTTYEVDEARAAAERLAQERG*
Ga0066661_107613531	3300005554	Soil	LEEVSHLGGGVVFAVVIQDGRLVGSDGRVRQREGWVYLWVGGSIARLTTSEVDEARAAAERLAEERS*
Ga0066698_105550511	3300005558	Soil	LEDWFRAYEELGFELEEVSHLGGGVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSIARLTTSDVDQARAAAERLAQERG*
Ga0066654_105837112	3300005587	Soil	EELEFKLEEVHDLGNGVVLAVVLQEARPAGIAGHVQQREGWVYVWVGGLIARLTASDIDEARAAAERLAEERG*
Ga0068856_1022207961	3300005614	Corn Rhizosphere	QHGRLVGSDGHVRQREGWVYLCVGGSIARLTTSDVDQGRAAAERLVGLCSQW*
Ga0068860_1004498703	3300005843	Switchgrass Rhizosphere	AYEELDFELEEVTHLGGGVVFAVVIQDGRLVGSDGHVRQREGWVYLCVGGSIARLTTSGVDQARAAAERLAQERG*
Ga0068862_1013617161	3300005844	Switchgrass Rhizosphere	VVFAVVVQNGRPAGSAGHLRQREGWVLVVRGLIARLTISEVDEARAAAERLAESRGGRDE
Ga0066652_1005297661	3300006046	Soil	GVVFAVVIQDGRLVGGDGHLRQREGWVYLCVGGSIARLTTSDVDEARAAAERLAEERG*
Ga0070712_1003155714	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QDGRLVGSAGRIRQREGWVYLCVGGSIARLTTSDVDHGRAAAEQLAQ*
Ga0070712_1006226361	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EGWFGMYEELEFKLEEVDDLGNGVVLAVVLQEARPSGSAGHVQQREGWVYVWVGGLIASLTVSDIDEARAAAERLARERA*
Ga0066653_104636821	3300006791	Soil	EELEVGLEEVRDLGTGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTIYEVDEARAAAARLAQERG*
Ga0075428_1024849162	3300006844	Populus Rhizosphere	KVEDARDLGNGVVFDVVAQDGLPVGSGGHGHFRQREGWVFLWERGLIARLSTQDIDVGRAAAERLAESRA*
Ga0075431_1011884422	3300006847	Populus Rhizosphere	EEVRDLGNGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTVYEVDEARAAAERLAQERG*
Ga0079217_103505792	3300006876	Agricultural Soil	VFAVVTQNGRPVGSAGHVRQREGWVYVWVGGLIELLTISDIDEARAAAERLAQERE*
Ga0066710_1046365871	3300009012	Grasslands Soil	VRDLGNGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTTYEVDEARAAAERLAQERAGG
Ga0111539_108128621	3300009094	Populus Rhizosphere	ELDFELEEVSDLGGGVVFAVVIQDGRPVGGGGRVRQREGWVYVWVGGLIAQFTISDIDEARAAAERLAEQRG*
Ga0111539_123348553	3300009094	Populus Rhizosphere	VFAVVAQDGLPVGSGGHGHFRQREGWVFLWERGLIARLSTQDIDVGRAAPEGLAESRA*
Ga0105245_118138361	3300009098	Miscanthus Rhizosphere	MRMVPSFRMSRTTKLEEVHDLGNGVVFAVVLQEARPVGIAGHVRQREGWIYVWVGGLIASLTASDPDEARAAAERLAES
Ga0066709_1026285873	3300009137	Grasslands Soil	FAVVIQDGGPVGSAGPLRQPEGRVFLWGRGLIAAVTAADIDEARAAAERLAKERA*
Ga0066709_1045470562	3300009137	Grasslands Soil	VEQEEVLDLGNGVVFAVTHQNARPAGSAGHVRQREGWVLVWEEGLTVQMTTYGDIDEARAAAERLAEERADG*
Ga0111538_125883423	3300009156	Populus Rhizosphere	QNGRPVGSAGHVRQREGWVYVWVGGLIAQFTVSDIDEARAAAERLAQERE*
Ga0111538_140529261	3300009156	Populus Rhizosphere	LNYELEEVSDLGGGVVFAVVIQDGRPVGADGRVRQREGWVYLWVGGSIARLTTSEVNQGRAAAERLAQERG*
Ga0126307_100313701	3300009789	Serpentine Soil	WFGMYEELEFKLEEVHDLGNGVVLAVVLQEGRPAGSAGHVQQREGWVYVWSGGLIARLTVFDIDEARAAAECLAQERE*
Ga0126313_102140831	3300009840	Serpentine Soil	MYEELEFKLEEVHDLGNGVVLAVVLQEGRPAGSAGHVQQREGWVYVWSGGLIARLTVFDIDEARAAAERLAQERE*
Ga0126304_110461031	3300010037	Serpentine Soil	NGVVLAVVLQEARPAGIAGHVQQREGWVYVWVGGLIARLTVFDIDEARAAAERLAQERE*
Ga0126309_100840582	3300010039	Serpentine Soil	MYEELEFKLEEVHDLGNGVVLAVVLQEARPAGIAGHVQQREGWVYVWVGGLIARLTVVDIDEARAAAERLAQERE*
Ga0126310_111635092	3300010044	Serpentine Soil	LEFGLEEVRDLGKGVVFAVVTQNGRPVGSAGHVRQREGWVYVWVGGLIAQFTISDIDEARAAAERLAQERE*
Ga0134070_103723412	3300010301	Grasslands Soil	EEWFGAYEELEVGLEEVRDLGNGIVFAVVFQNGRLVGSAGHLRQREGWVFVWVRGLIARLAISDIDEARAAAERLAKERG*
Ga0134080_103276191	3300010333	Grasslands Soil	LEEVRDLGKGVVFAVVTQNGRLVGSAGHVRQREGWVYVWVGGLIARLTTYELDEARVAAERLAEERG*
Ga0134126_100141211	3300010396	Terrestrial Soil	VVIQHGRLVGSDGHVRQREGWVYLCVGSSIARLTTSDVDQGRAAAERLVGLCSQW*
Ga0126361_107766022	3300010876	Boreal Forest Soil	EYKLEEVHDLGNGVVFAVVFQEARPAGIAGHVQQREGWVYVWVGGLIARLTTSDIDDARAAAERLAESSEQT*
Ga0126350_104627161	3300010880	Boreal Forest Soil	ELDFELEEVSHLGGGVVFAVVSQDGRLVGSAGHIRQREGWVYLCVGGSMARLATSDVDEGRAAAERLAEERK*
Ga0137365_107943822	3300012201	Vadose Zone Soil	FKLEDARDLGNGVVLAVVVQEGVPAGSAGHGHFRQREGWVFLWERGLIARLSTHEIDEARTAAERLAEERG*
Ga0137399_102668542	3300012203	Vadose Zone Soil	VVFAVVIQDGRPVGGDGRLRQREGWVYLCVGGSIARLTTSDVDQARAAAERLAQERG*
Ga0137399_117818271	3300012203	Vadose Zone Soil	DGRPVGGDGRLRQREGWVYLWVGGSIARLTTYDVDQARAAAERLAEERG*
Ga0137376_115978591	3300012208	Vadose Zone Soil	IQDGRPVGSAGHLRQREGWVFLWVRGLIARLTTSEIDEARAAAERLAQERE*
Ga0137376_116827012	3300012208	Vadose Zone Soil	YEELEVGLEEVRDLGNGVVFAVVVQNGRPAGSAGRLRQREGWVFVWVRGLIARLTISEVDEARAAAERLAQERG*
Ga0150985_1118375482	3300012212	Avena Fatua Rhizosphere	LEFWLEEVRDLGNGVVFAVVVQSGRPAGSGGHLRQREGWVFVWVRDLIARLSVCEVDEAREAAERLA
Ga0137398_107544922	3300012683	Vadose Zone Soil	EFGLEAVRDLGNGVVFAVVVQNGRPAGSAGHLRAREGWVFVWVRGLIARLTTYDIDEARAAAERLAGERA*
Ga0137395_109242311	3300012917	Vadose Zone Soil	YEELDFELEEITQLGGGVVFAVVTQDGRLVGTDGHIRQREGWVYLCVGGLIARLTTSEVDEARAAAERLAEERG*
Ga0164301_105938793	3300012960	Soil	ELEYELEEVRDLGTGVVFAVVVQNGRPTGSAGHLRQREGWVFVWVRGLVARITISEVDEARAAAERLAQERG*
Ga0164301_108038262	3300012960	Soil	LEEVHDLGNGVVLAVVLQEARPAGVAGHVQQREGWVYVWVGGLIARLTASDIDEARVAAERLAKERG*
Ga0164301_116679891	3300012960	Soil	LEDWFRAYEELGFELEEVSHLGGGVVFAVVIQDGRPVGGDGRLRQREGWVYLFAGGSITRLTTSEVGEARAAAQRLAEERK*
Ga0164302_117686042	3300012961	Soil	EEVSHLGGGVVFAVVIQDGRLVGGDGHIRQREGWVYVCVGGSIARLTTRDGVDEARAAAERLAQERG*
Ga0134087_104522961	3300012977	Grasslands Soil	FGLEEVRDLGNGVVFAVVVQNGRPAGRADHLRQREGWVFVWVRGLIARLAIYEVDEARAAAERLAQERG*
Ga0164304_113573471	3300012986	Soil	VFAVVVQDGRLLGGDGLVQQREGWVYVLAEGSIARLAIYEVDQARAVGERLAQERD*
Ga0164304_114527782	3300012986	Soil	RAYEELGFELEEVSHLGGGVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSIARLTTSDVDQARAAAERLAQERG*
Ga0164306_109291792	3300012988	Soil	GVVFAVVLQEARPAGVAGRVRQREGWIYVWAGGSIARLAVSDVDGGRAAAERLAEERGRRRVPGLDQ*
Ga0164305_113386281	3300012989	Soil	DLGNGVVLAVVLQEGRPAGVAGHVQQREGWVYVWVGGLIARLTASDIDEARAAAERLAEERG*
Ga0164305_120053261	3300012989	Soil	SHLGGGVVFAVVIQGGRLVGSDGRVRQREGWVYLWVGGSIARLTTSEVDEARAAAERLAEERG*
Ga0157375_135860692	3300013308	Miscanthus Rhizosphere	FLEDWFRAFEKLDFELEEVSDLGGGVVFAVVIQDGRPVDSGGHVRQREGWVYLCVGGSIARLTTSDVEPARAAAERLARERE*
Ga0157380_108972074	3300014326	Switchgrass Rhizosphere	GLEEVRDLDNGVVFAVVVQNGRPAGSGGHLRQREGWVFVWVRDLIARLTILEVDEARAAAERLAGERGQT*
Ga0167652_10046095	3300015164	Glacier Forefield Soil	FGAYEELEWGLEEVRDPGNGIVFAVVIQNGRLTSSAGHLRQREGWVFVWVRGMIARVTTSDIDTARAAAERLAGERG*
Ga0132258_110269931	3300015371	Arabidopsis Rhizosphere	LEFKLEEVHDLGNGVVFGVVLQEARPPGLAGHVRQREGWVYVWVGGLIARLTVLDIDEARAAADALAESRG*
Ga0132257_1029712722	3300015373	Arabidopsis Rhizosphere	LEEVSHLGGGVVFAVVIQDGRPVGGDGHVRQREGWVYLCEGGSLARLTTFEVDQGRAAAERLAQERG*
Ga0182041_104229242	3300016294	Soil	MYEELEFKLEEVHELGNGVVFAVVVQEARPADIAGHVRQREGWVYVWVEGLIARFTVSDTDEARAAAERLAEERG
Ga0182033_106430962	3300016319	Soil	LGFDFEEVSDLGSGVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSITRLTTSEVDEGRAAAEPLAQERG
Ga0190266_109425181	3300017965	Soil	EELDFELEEVSHLGGGVVFAVVIQEGRPVGGDGRVRQREGWVYLCVGGSIARLTTSDVDEARAASERLAQERGG
Ga0187783_113325682	3300017970	Tropical Peatland	AYEELHFEFEEVSHLGNGVVFAVCIQDARLVGSAGHIRQREQWVYIWARGLIARLTTYDVDEGRAAAERLAQERG
Ga0187766_111169452	3300018058	Tropical Peatland	FDAYEELHFEFEEVSHLGNGVVFAVCIQDARLVGSAGHIRQREGWVYIWARGLIARLQTTYIDIEEGRAAAERLAKERG
Ga0184617_12116651	3300018066	Groundwater Sediment	GVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSIARLTTSDVDRARAAAERLAQERG
Ga0184618_102653801	3300018071	Groundwater Sediment	GVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRDLIARLTISEVDEARAAAERLAQERG
Ga0184609_104321782	3300018076	Groundwater Sediment	GNGVVFAVVVQNGRPAGSVGHLRQREGWVFVWVRGLIARLTIHEVDEARAAAERLAEERE
Ga0184625_103200211	3300018081	Groundwater Sediment	LAVVFQEGRPAGIAGHVQQREGWVYVWVGRLIARLTVYAIDEARAAAERLAESSG
Ga0066667_122775572	3300018433	Grasslands Soil	EEVRDLGNGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTTYEVDEARAAAERLARERG
Ga0190270_128775431	3300018469	Soil	EDWFRAYEELDFELEEVSHLGGGVVFAVVIQDGRLVGGDGRLRQREGWVYLCVGGSIARLTTSDVDEARAASERLAQERG
Ga0173481_105140552	3300019356	Soil	GGIVFAVVIQDGRLVAGDGRLRQREGWVYLWMGGSIARLTTYEVDQARAAAERLAAQRG
Ga0210382_101676103	3300021080	Groundwater Sediment	VVIQDGRPVGGDGRLRQREGWVYLWTGGSIARLTISEVDQARAAAERLAQERE
Ga0210384_109914611	3300021432	Soil	TYEELEFGLEEVRDLGKGVVFAVVTQNGRPVGSAGHLRQREGWVYVWMRGLIERFTTYGDIDEARAAAERLAAERG
Ga0207693_102351094	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	FAVVTQNGRPVGSAGHVRQREGWVYVWVGGLIARLTISDIDEARAAAERLAEERA
Ga0207663_112877331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ELEFKLEEVHDLGNGVVLAVVLQEARPSGSAGHVQQREGWVYVWVGGLIASLTVSDIDEARAAAERLARERA
Ga0207652_113551801	3300025921	Corn Rhizosphere	EELDFELEEVSHLGGGVVFAVVIQHGRLVGSDGHVRQREGWVYLCVGGSIARLTTSDVDQGRAAAERLVGLCSQW
Ga0207694_104259292	3300025924	Corn Rhizosphere	LEFGPEEVRDLGNGVMFAVVVQNGRPAGSGGHLRQREGWVLVWERGLIARLTISEVDEARAAAERLAQERG
Ga0207700_110527511	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	DEWFGAYEELDYELEEVSHLGGGVVFVVAIQDGRLVGSDGRVRQREGWVYLWVGGSIARLTTSEVDQARATAERLAQERG
Ga0207665_107075121	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LEDWFRAYEELDFELEKVSHLGGGVVFAVVSQDGRLVGSAGRIRQREGWVYLCVGGSIARLTTSDVDHGRAAAEQLAHERG
Ga0207711_119876872	3300025941	Switchgrass Rhizosphere	EEWFGAYEELDFELEEVSHLGGGVVFAVVIQDGRLVGSDGHIRQREGWVYLCVRGSIARLTTSDVEPARAAAERLARERE
Ga0207689_109671311	3300025942	Miscanthus Rhizosphere	MKCCFRAYEELNYELEEVSDLGGGVVFAVVIQDGRPVGGGGRVRQREGWVYLWMGGVIARLTTSEVDQARAA
Ga0208535_10156751	3300026045	Natural And Restored Wetlands	GVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTIYEVDEARAAAERLAQERG
Ga0209839_102359942	3300026294	Soil	EEWFATYEELEFGLEEVRDLGNGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLVARLTTSEVDEARAAAERLAQERG
Ga0209027_10662531	3300026300	Grasslands Soil	ALVVQNGRPAGSGGHLRQREGWVFVWVRDLIARLTISEVDEARAAAERLARERGQA
Ga0209577_104448251	3300026552	Soil	ELEFKLEEVHDLGNGVVFAVVLQEARPAGTAAHVRQREGWVYVWVGGLITRLTASDLDEARAAAERLAKERE
Ga0208995_10689882	3300027388	Forest Soil	SHLGGGVVFAVVIQDGRLVGSDGRVRQREGWVYLWVGGSIARLTTSDIDEARGAAERLAEERG
Ga0209040_101100003	3300027824	Bog Forest Soil	LAYEELDYGLEEVRDLGNGVVFAVVVQNGRPVGSAGHLRQREGWVFVWVRGLIARLTILEVDEARAAAERLAEERG
Ga0209488_111638012	3300027903	Vadose Zone Soil	DLGNGVVSAVVTQNGRLVGTAGHVRQREGWVYVWVGGLIARLTTYELDEARVAAERLAEERG
Ga0311369_113298992	3300029910	Palsa	EWFATYEELEFGLEEVRDLGNGVVFAVVVQNGRPAGSAGHLRQREGWVFVWVRGLIARLTTSEVYEAHAAAERLAQERG
Ga0311340_112693041	3300029943	Palsa	EEVRDLGNGVVFAVVVQNGRLAGSAGHVRQREGWVFVWVGGLIASLTTFEVDEGRAAAERLTEEMAGR
Ga0308197_103149241	3300031093	Soil	VRNLGTGVVFAVVAQDGLPVGSAGHGHFRQREGWVFLWERGLIARLSTQDIDVARAAAERLAESRA
Ga0307501_102856552	3300031152	Soil	NGVVFAVVIQDGRPVGGAGHLRQREGWVFLWVRGLIARLTTSEIDEARAAAERLAQEPE
Ga0318516_102793471	3300031543	Soil	GVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSITRLTTSEVDEGRAAAEPLAQERG
Ga0318574_108306281	3300031680	Soil	FRGYEELGFDFEEVSDLGSGVVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSITRLTTSEVDEGRAAAEPLAQERG
Ga0307468_1013657581	3300031740	Hardwood Forest Soil	VSHLGGGVVFAVVIQDGRLAGSGGHLGQREGWVYLCVGGSIARLTTSDVDQARAAAERLAEERG
Ga0307475_105686303	3300031754	Hardwood Forest Soil	ISDLGNGVVFGVLIQEGRLVGSGAHVGQREGWVYVWARGLIARLETTYFDIDEGRAAAERLAEERG
Ga0318508_11467082	3300031780	Soil	DFVEEWWSAYEELDFELEDISYLGAGLVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSITRLTTSEVDEGRAAAEPLAQERG
Ga0318527_101650123	3300031859	Soil	AGLVFAVVIQDGRPVGGDGHVRQREGWVYLCVGGSITRLTTSEVDEGRAAAEPLAQERG
Ga0318536_105169082	3300031893	Soil	ESGLEEARDLGHGVVFAVVVQNGRPAGSAGHLRQLEGWVIVWVGGVIASITVYEVDEGRAAAEALARERG
Ga0318551_107671581	3300031896	Soil	YEELEFRLEEVHELGNGVVFAVVVQEARPADIAGRVRQREGWVYVWVEGLITRFTVSDIDEARATAERLAQERS
Ga0310916_105502591	3300031942	Soil	VVFAVVVQEARPADIAGHVRQREGWVYVWVEGLIARFTVSDTDEARAAAERLAEERG
Ga0307479_117062482	3300031962	Hardwood Forest Soil	EVRDLGNGVVFAVVTQNGRPVGSAGHLRQREGWVFVWVRGLIARLRTSEVDEARAAAERLAQERA
Ga0307409_1006920853	3300031995	Rhizosphere	LEFKLEEVHDLGNGVVLAVVLQEARPAGIAGHVQQREGWVYVWVGGLIARLTVLDIDEARAAAERLAQERE
Ga0318507_105409351	3300032025	Soil	GFLPDWFRAWEELDFELEEVSDLGGGVVFAVVIQDGRPVGGEGRFRQREGWVYLWVGGSMARLTASEVDEGRAHAERLAQERG
Ga0307470_114345812	3300032174	Hardwood Forest Soil	GGVVFAVVIQDGRLAGSGGHLGQREGWVYLCVGGSIARLTTYDVDQARAAAERLAEERG
Ga0306920_1030348051	3300032261	Soil	LDFELEEVSDLGGGIVLAVVIQDGRPVGGEGRFRQREGWVYLWVGGSMARLTASEVDEGRAHAERLAQERG
Ga0306920_1032157521	3300032261	Soil	VVFAVVIQDGRLVGSAGRIGQREGSVYLWVGGSIARFTAYLDIDQARAAAERLAEERE
Ga0335081_110891263	3300032892	Soil	RAFLENWYGVYGELDFELEEASHLGGGVVFAVVTQEGRLVGGDGHIRQREGWVYLCVGGRIARLTISEVDEGRAAAERLARERV
Ga0335072_114602181	3300032898	Soil	VQTGRMAGSTGRVRQREGWVSVWERGLIARIMFREVDEGRAAAETLAEAGGRA
Ga0310914_111553362	3300033289	Soil	EELGFELEEVSHLGGGVVLAVVIQDGRPVGGGGHVRQREGWVYLYVGGSIARLTTSEVDEARAAAERRAKERA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences