Metagenome Family F062954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062954
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	49 residues
Representative Sequence	SRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQDPGLNIGDPFPLWTLH
Number of Associated Samples	91
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.62 %
% of genes near scaffold ends (potentially truncated)	94.62 %
% of genes from short scaffolds (< 2000 bps)	93.85 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.231 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.154 % of family members)
Environment Ontology (ENVO)	Unclassified (36.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 13.33% Coil/Unstructured: 86.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF12697	Abhydrolase_6	3.85
PF12694	cpYpsA	3.85
PF04002	RadC	1.54
PF02201	SWIB	1.54
PF00076	RRM_1	1.54
PF00330	Aconitase	1.54
PF01934	HepT-like	1.54
PF12833	HTH_18	1.54
PF01058	Oxidored_q6	0.77
PF00561	Abhydrolase_1	0.77
PF05114	DUF692	0.77
PF13358	DDE_3	0.77
PF13424	TPR_12	0.77
PF01872	RibD_C	0.77
PF08240	ADH_N	0.77
PF07690	MFS_1	0.77
PF02861	Clp_N	0.77
PF11638	DnaA_N	0.77
PF00291	PALP	0.77
PF10431	ClpB_D2-small	0.77
PF10604	Polyketide_cyc2	0.77
PF14310	Fn3-like	0.77
PF00216	Bac_DNA_binding	0.77
PF14517	Tachylectin	0.77
PF00300	His_Phos_1	0.77
PF12146	Hydrolase_4	0.77
PF12847	Methyltransf_18	0.77
PF00106	adh_short	0.77
PF07729	FCD	0.77
PF02852	Pyr_redox_dim	0.77
PF12680	SnoaL_2	0.77
PF13610	DDE_Tnp_IS240	0.77
PF01220	DHquinase_II	0.77
PF04187	Cofac_haem_bdg	0.77
PF02264	LamB	0.77
PF12706	Lactamase_B_2	0.77
PF07929	PRiA4_ORF3	0.77
PF00355	Rieske	0.77
PF07592	DDE_Tnp_ISAZ013	0.77
PF06305	LapA_dom	0.77
PF02452	PemK_toxin	0.77
PF03030	H_PPase	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	1.54
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	1.54
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.54
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	1.54
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.77
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.77
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.77
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.77
COG3220	Uncharacterized conserved protein, UPF0276 family	Function unknown [S]	0.77
COG3016	Putative heme-binding protein PhuW	General function prediction only [R]	0.77
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.77
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.77
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.77
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.77
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.77
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.77
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.77
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.77
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
All Organisms	root	All Organisms	40.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
cellular organisms	root	All Organisms → cellular organisms	40.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.31 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	1.54 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.77 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.31 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	1.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.77 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.77 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.77 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.77 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.77 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.77 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	1.54 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.54 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.77 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.77 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	1.54 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1.54 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.77 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.77 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.77 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.77 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
unclassified Geothrix	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix	1.54 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.54 %
Nitrosospira lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	0.77 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.77 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.77 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.77 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.77 %
Candidatus Brocadia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia	0.77 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
Geothrix sp. SG189	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG189	1.54 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.54 %
Nocardia mangyaensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia mangyaensis	0.77 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.77 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.77 %
Deinococcus marmoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus marmoris	0.77 %
Candidatus Brocadia fulgida	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia fulgida	0.77 %
Nitrosospira lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	0.77 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
Geothrix sp. SG189	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG189	1.54 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.54 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.77 %
Nocardia mangyaensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia mangyaensis	0.77 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.77 %
Deinococcus marmoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus marmoris	0.77 %
Candidatus Brocadia fulgida	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia fulgida	0.77 %
Nitrosospira lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	0.77 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01CCNF6	Not Available	518	Open in IMG/M
2170459010\|GIO7OMY02GLYTO	Not Available	508	Open in IMG/M
3300002917\|JGI25616J43925_10136265	Not Available	989	Open in IMG/M
3300004152\|Ga0062386_101354013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	592	Open in IMG/M
3300005332\|Ga0066388_103779919	Not Available	772	Open in IMG/M
3300005332\|Ga0066388_108596236	Not Available	508	Open in IMG/M
3300005434\|Ga0070709_10265041	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300005434\|Ga0070709_11513889	Not Available	545	Open in IMG/M
3300005436\|Ga0070713_101008674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300005437\|Ga0070710_10248287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1143	Open in IMG/M
3300005437\|Ga0070710_10419006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	901	Open in IMG/M
3300005445\|Ga0070708_100777048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300005536\|Ga0070697_100088083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus marmoris	2563	Open in IMG/M
3300005602\|Ga0070762_10280745	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005764\|Ga0066903_103357168	Not Available	864	Open in IMG/M
3300006028\|Ga0070717_10218176	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300006059\|Ga0075017_100623795	Not Available	825	Open in IMG/M
3300006175\|Ga0070712_101077566	Not Available	697	Open in IMG/M
3300006175\|Ga0070712_101484254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300006176\|Ga0070765_100570722	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300009698\|Ga0116216_10994803	Not Available	501	Open in IMG/M
3300009792\|Ga0126374_11514094	Not Available	551	Open in IMG/M
3300010043\|Ga0126380_11406886	Not Available	613	Open in IMG/M
3300010048\|Ga0126373_10918325	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300010048\|Ga0126373_11349170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG189	779	Open in IMG/M
3300010048\|Ga0126373_12982579	Not Available	528	Open in IMG/M
3300010048\|Ga0126373_13308885	Not Available	501	Open in IMG/M
3300010361\|Ga0126378_11286334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG189	827	Open in IMG/M
3300010366\|Ga0126379_10788764	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1049	Open in IMG/M
3300010376\|Ga0126381_100269814	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300010376\|Ga0126381_101079483	Not Available	1159	Open in IMG/M
3300010376\|Ga0126381_101678114	Not Available	918	Open in IMG/M
3300010376\|Ga0126381_102701303	Not Available	710	Open in IMG/M
3300010376\|Ga0126381_103504074	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012083\|Ga0154000_1124466	Not Available	519	Open in IMG/M
3300012169\|Ga0153990_1057335	Not Available	884	Open in IMG/M
3300012202\|Ga0137363_10007511	All Organisms → cellular organisms → Bacteria	6838	Open in IMG/M
3300012202\|Ga0137363_10180310	Not Available	1681	Open in IMG/M
3300012361\|Ga0137360_10156084	Not Available	1814	Open in IMG/M
3300012362\|Ga0137361_10237548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1658	Open in IMG/M
3300012362\|Ga0137361_10809279	Not Available	852	Open in IMG/M
3300012362\|Ga0137361_11678273	Not Available	555	Open in IMG/M
3300012927\|Ga0137416_10367357	Not Available	1211	Open in IMG/M
3300012927\|Ga0137416_11633965	Not Available	587	Open in IMG/M
3300016270\|Ga0182036_11768857	Not Available	523	Open in IMG/M
3300016270\|Ga0182036_11814258	Not Available	516	Open in IMG/M
3300016294\|Ga0182041_10327617	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300016294\|Ga0182041_11068347	Not Available	732	Open in IMG/M
3300016319\|Ga0182033_10346712	Not Available	1241	Open in IMG/M
3300016357\|Ga0182032_11520827	Not Available	581	Open in IMG/M
3300016387\|Ga0182040_10487790	Not Available	982	Open in IMG/M
3300016387\|Ga0182040_11597677	Not Available	555	Open in IMG/M
3300016404\|Ga0182037_12081408	Not Available	510	Open in IMG/M
3300018037\|Ga0187883_10598830	Not Available	572	Open in IMG/M
3300020199\|Ga0179592_10118151	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300020580\|Ga0210403_10778071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300020582\|Ga0210395_10010581	All Organisms → cellular organisms → Bacteria	6862	Open in IMG/M
3300020583\|Ga0210401_10940690	Not Available	723	Open in IMG/M
3300021088\|Ga0210404_10357256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	812	Open in IMG/M
3300021168\|Ga0210406_11371038	Not Available	506	Open in IMG/M
3300021178\|Ga0210408_11046777	Not Available	630	Open in IMG/M
3300021361\|Ga0213872_10270170	Not Available	712	Open in IMG/M
3300021372\|Ga0213877_10056571	Not Available	1138	Open in IMG/M
3300021403\|Ga0210397_10125207	Not Available	1767	Open in IMG/M
3300021404\|Ga0210389_10038026	Not Available	3693	Open in IMG/M
3300021420\|Ga0210394_10386597	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300021432\|Ga0210384_11597858	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300021439\|Ga0213879_10097776	Not Available	820	Open in IMG/M
3300021444\|Ga0213878_10019200	Not Available	2507	Open in IMG/M
3300021444\|Ga0213878_10080927	Not Available	1301	Open in IMG/M
3300021474\|Ga0210390_10331609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1288	Open in IMG/M
3300021475\|Ga0210392_11139435	Not Available	584	Open in IMG/M
3300025898\|Ga0207692_10620971	Not Available	696	Open in IMG/M
3300025906\|Ga0207699_10249323	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300025910\|Ga0207684_10165172	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300025910\|Ga0207684_11044782	Not Available	682	Open in IMG/M
3300026319\|Ga0209647_1111949	Not Available	1275	Open in IMG/M
3300026551\|Ga0209648_10337939	Not Available	1046	Open in IMG/M
3300026551\|Ga0209648_10841330	Not Available	502	Open in IMG/M
3300026557\|Ga0179587_10122663	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300026557\|Ga0179587_10618674	Not Available	713	Open in IMG/M
3300027371\|Ga0209418_1051944	Not Available	728	Open in IMG/M
3300027521\|Ga0209524_1043533	Not Available	945	Open in IMG/M
3300027548\|Ga0209523_1033808	Not Available	1030	Open in IMG/M
3300027698\|Ga0209446_1078335	Not Available	844	Open in IMG/M
3300027727\|Ga0209328_10076222	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300027824\|Ga0209040_10231837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	937	Open in IMG/M
3300027824\|Ga0209040_10456785	Not Available	579	Open in IMG/M
3300027825\|Ga0209039_10120450	Not Available	1111	Open in IMG/M
3300027882\|Ga0209590_10572309	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300027884\|Ga0209275_10722886	Not Available	574	Open in IMG/M
3300027903\|Ga0209488_10531361	Not Available	859	Open in IMG/M
3300028906\|Ga0308309_10977064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300031231\|Ga0170824_101623517	Not Available	557	Open in IMG/M
3300031564\|Ga0318573_10640843	Not Available	572	Open in IMG/M
3300031718\|Ga0307474_10232935	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300031720\|Ga0307469_11569328	Not Available	632	Open in IMG/M
3300031724\|Ga0318500_10226869	Not Available	901	Open in IMG/M
3300031724\|Ga0318500_10710299	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031753\|Ga0307477_10168772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1526	Open in IMG/M
3300031753\|Ga0307477_10280653	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031753\|Ga0307477_10338876	Not Available	1035	Open in IMG/M
3300031753\|Ga0307477_10352107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1012	Open in IMG/M
3300031754\|Ga0307475_10136363	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300031754\|Ga0307475_10161157	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300031754\|Ga0307475_10601914	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia fulgida	880	Open in IMG/M
3300031754\|Ga0307475_10753832	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031754\|Ga0307475_10993185	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031796\|Ga0318576_10586944	Not Available	525	Open in IMG/M
3300031823\|Ga0307478_10027943	All Organisms → cellular organisms → Bacteria	4040	Open in IMG/M
3300031823\|Ga0307478_10583982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	934	Open in IMG/M
3300031823\|Ga0307478_11157940	Not Available	645	Open in IMG/M
3300031890\|Ga0306925_12246725	Not Available	506	Open in IMG/M
3300031897\|Ga0318520_10356896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	888	Open in IMG/M
3300031910\|Ga0306923_11571108	Not Available	685	Open in IMG/M
3300031912\|Ga0306921_10003632	All Organisms → cellular organisms → Bacteria	15649	Open in IMG/M
3300031912\|Ga0306921_10357331	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300031912\|Ga0306921_11788349	Not Available	661	Open in IMG/M
3300031912\|Ga0306921_12430179	Not Available	546	Open in IMG/M
3300031947\|Ga0310909_10333784	Not Available	1272	Open in IMG/M
3300031947\|Ga0310909_10759934	Not Available	803	Open in IMG/M
3300031947\|Ga0310909_11107751	Not Available	643	Open in IMG/M
3300031954\|Ga0306926_12116810	Not Available	629	Open in IMG/M
3300031962\|Ga0307479_10757150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia mangyaensis	948	Open in IMG/M
3300031962\|Ga0307479_11743211	Not Available	576	Open in IMG/M
3300032001\|Ga0306922_10544883	Not Available	1234	Open in IMG/M
3300032059\|Ga0318533_10846678	Not Available	671	Open in IMG/M
3300032076\|Ga0306924_10771299	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300032892\|Ga0335081_10678304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300032955\|Ga0335076_10344386	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.69%
Host-Associated	Host-Associated	2.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Aquatic	Environmental → Aquatic	5.38%
Fungi	Host-Associated → Fungi	1.54%
Plants	Host-Associated → Plants	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Freshwater	Environmental → Aquatic → Freshwater	4.62%
Mycelium	Host-Associated → Fungi → Mycelium	1.54%
Sediment	Environmental → Aquatic → Sediment	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.54%
Loam	Environmental → Terrestrial → Soil → Loam	19.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.54%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.54%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	3.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.31%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012083	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaG	Host-Associated	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_02500460	2170459009	Grass Soil	DAFNTVAFGEIKPHCGSLKDRRIDLVYYQDPCLNIGDPFRLWTLH
F62_03997280	2170459010	Grass Soil	YQLIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYHQSPGLNIGDPFPLWTLH
JGI25616J43925_101362651	3300002917	Grasslands Soil	LQRNRELGIGTKYRGSFNTLAFGEIKPYSGSLKDGRLDLVYYRDPGLNVGDSFPLWTLH*
Ga0062386_1013540132	3300004152	Bog Forest Soil	FNTLAFGEIKPYSGSPKDGRPDLVYYQEPGLKVGDQFSLWTLH*
Ga0066388_1037799191	3300005332	Tropical Forest Soil	KYRGSFNTLVFGEIKPHTGSLHGGRLDLVYFQNPDLDIGDQFPLWTLR*
Ga0066388_1085962362	3300005332	Tropical Forest Soil	DQYQVIVQIGTKYRGSFNTLAFGEIKPYSGSLKDGRLDLVYYRDPGLKAGDQFPLWTLH*
Ga0070709_102650411	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VIVQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLILLPGSGLNVGDQFPVWTLR*
Ga0070709_115138892	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QISPKYRGSFNTVAFGEIKPHSGSLKDGRLDLLYHQNPGFNIGDPFPLWTLH*
Ga0070713_1010086741	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FNTLAFGEIKPYSGSLKDGRLDLIYYRDPALEVGDPFPLWTLR*
Ga0070710_102482871	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TRYRGSFNTLAFGDIKPYSGSLKDGRLDLIYYRDPGLEVGDAFPLWALR*
Ga0070710_104190061	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RGSFNTLAFGEIKPYSGSLKDGRLDLILLPGSGLNVGDQFPVWTLR*
Ga0070708_1007770482	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VFGEIKPHSGSLQDGRLNLVYYQNPGLSIRDPFPLWTLH*
Ga0070697_1000880831	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ETKYRGSFNTLAFGDNKPFTGSYHDGRLDLVYYRDPCLEVNQAFPLWTIRRFQSRSHR*
Ga0070762_102807451	3300005602	Soil	RLVNTLAFGEIKPYSGSLKDGRLDLIYYRDPGLNVGDPFPVWTLR*
Ga0066903_1033571681	3300005764	Tropical Forest Soil	VQITNKYRGSFNTLAFGEIKPYSGSLRDGRLDLVYYRDPGLRAGDLFPLWTLH*
Ga0070717_102181761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QVIVEISPKYRGSFNTLVFGEIKPHSGSLQDGRLNLVYYQNPGLSIRDPFPLWTLH*
Ga0075017_1006237951	3300006059	Watersheds	IVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQNPGLNVEEPFPLWTLH*
Ga0070712_1010775662	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NTLAFGEIKPHSGSLRDGRLDLVYYQNPGLSVEDPFPLWTLH*
Ga0070712_1014842541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LAFGEIKPYSGSLKDGRLDLILLPGSGLNVGDQFPVWTLR*
Ga0070765_1005707221	3300006176	Soil	NTLAFGEIKPYSGSLKEGRLDLIYYRDPGLNVGDPFPVWTLR*
Ga0116216_109948031	3300009698	Peatlands Soil	IGIPKYRGSFNTLVFGERKPYRGSLKDGRLDLIYHQDPGFTPGELFPLWTLRR*
Ga0126374_115140941	3300009792	Tropical Forest Soil	KYKGSFNTLVFGEMKPHSGSLKDGRPDLVYYQNPGLGIGDLFPLWTLH*
Ga0126380_114068861	3300010043	Tropical Forest Soil	NTLAFGEIKPHSGSLKDGRLDLVYYQNPGVNMGDSFRLWILN*
Ga0126373_109183252	3300010048	Tropical Forest Soil	FNTLAFGEIKPYTGALKDGRLDLVYYRDPGLNEGDPFPLWTLQ*
Ga0126373_113491702	3300010048	Tropical Forest Soil	ITNKYRGSFNTLLFGEIKPYIGSLKDGRLDLVYYRDPGLRAGDQFPLWTLH*
Ga0126373_129825792	3300010048	Tropical Forest Soil	KPYTGALKDGRLDLVYYRDPELNEGDPFPLWTLH*
Ga0126373_133088851	3300010048	Tropical Forest Soil	SFNTLAFGEIKPYIGSLKDGRLDLVYYQNPGLTVGDPFPLWKLR*
Ga0126378_112863341	3300010361	Tropical Forest Soil	LFGEIKPYIGSLKDGRLDLVCYRDPGLRAGDQFPLWTLH*
Ga0126379_107887641	3300010366	Tropical Forest Soil	AFGEIKPYIGALKDGRLDLVYHRDPGLKVGDDFPVWTLT*
Ga0126381_1002698144	3300010376	Tropical Forest Soil	QVIVQIGTKYRGSFNTLAFGEIKPYTGALKDGRLDLVYYRDPELNEGDPFPLWTLQ*
Ga0126381_1010794831	3300010376	Tropical Forest Soil	QVIVQISTKYRGSFNTLAFGEIKPYIGSLKDGRLGLVYYQNPGLNEGDQFPLWTLH*
Ga0126381_1016781142	3300010376	Tropical Forest Soil	NTLLFGEIKPYIGSLKDGRLDLVCYRDPGLRAGDQFPLWTLH*
Ga0126381_1027013031	3300010376	Tropical Forest Soil	EAHLINTLAFEEIKPPIGSLRDRRLDLVYYQNPGLSIGDPFSLWTLH*
Ga0126381_1035040741	3300010376	Tropical Forest Soil	FGEIKPYIGSLKDGRLDLVYYRAPGLNKGDPFPLWNATLSCV*
Ga0154000_11244661	3300012083	Attine Ant Fungus Gardens	QAIIQIGPRYRGSFNTLAFGDIKPYSGSLKDGRLDLVYYQDPGLEVGDQLPLWILR*
Ga0153990_10573351	3300012169	Attine Ant Fungus Gardens	ISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLIYHQNPGLSIGDPFPLWTLH*
Ga0137363_100075119	3300012202	Vadose Zone Soil	MSPKYRGSFNTLAFGEIKPHSGSLRDGRLDLVYYQDPGLNLGDPFRLWTLH*
Ga0137363_101803103	3300012202	Vadose Zone Soil	LAFGEIKPHSGFLKEGRLDLVYYQNYGLNIGDPFRRWTLH*
Ga0137360_101560841	3300012361	Vadose Zone Soil	SPKYRGSFNTLAFGEIKPHSGSLRDGRLDLVYYQDPGLNLGDPFRLWTLH*
Ga0137361_102375483	3300012362	Vadose Zone Soil	SKYRGSFNTLAFGEIKPHSGSLRHGRLDLVYHQNPALSVGDTFPLWTLH*
Ga0137361_108092792	3300012362	Vadose Zone Soil	AFGEIKPHSGFLKEGRLDLVYYQNYGLNIGDPFRRWTLH*
Ga0137361_116782731	3300012362	Vadose Zone Soil	GSFNTLAFGEIKPYVGSLKDSRLDLVYYRDPGLSAGDQFPLWTLQ*
Ga0137416_103673572	3300012927	Vadose Zone Soil	VIVQIGPKYRGSFNTLAFGEIKPHSGSFKDGRLDLVYHKDPGFNIEDPFPLWTLH*
Ga0137416_116339651	3300012927	Vadose Zone Soil	VIVQIGPKYRGSFNTLAFGEIKPHSGSFKDGRLDLVYHKDPGFNIGDPFPLWTLH*
Ga0182036_117688571	3300016270	Soil	HYQVVVQINTRYRGSFNTLAFGEIKPYSGSLKDGRLDLVYYRDPSLSAGDPFPLWTLH
Ga0182036_118142581	3300016270	Soil	QVVVQITNKYRGSFNTLAFGEVKPYSGSLKNGRLDLVYYRDPGLRAGDQFPLWTLH
Ga0182041_103276171	3300016294	Soil	VIVQISTKYRGSFNMLAFGEIKPYSGSLKDGRLDLVYHRDPGLKVGDQFPLWTLH
Ga0182041_110683472	3300016294	Soil	YQVVVQISPKYRGSFNTIAFGEIKPHSGSLQHGRLDLVYYQNPGLSIGDPFPLWTLH
Ga0182033_103467121	3300016319	Soil	LAFGEIKPHIGSLRDGRLDLVYYQNPGLSIGDPFSLWTLH
Ga0182032_115208271	3300016357	Soil	SFNTLAFGAIKPHSGSLRDGRLDLVYYQNPGLSVGDPFPLWTLH
Ga0182040_104877903	3300016387	Soil	GSFNTLAFGEVKPHSGSLQHGRLDLLYYQNPGLSIGDPFPLWTLH
Ga0182040_115976772	3300016387	Soil	GIQYQVVVQIGTPKYKGSFNTLVFGEMKPHSGSLKDGRLDLVYYQNPGLGIGDLFPLWTL
Ga0182037_120814081	3300016404	Soil	KYRGSFNTLAFGEIKPHSGSLRDGCLDLVYFQNPGLSVEDPFPLWTLH
Ga0187883_105988302	3300018037	Peatland	FNTLAFGEIKPHSGSLKDGRLDLVYYQNPGLNIGDPFQLWTFH
Ga0179592_101181513	3300020199	Vadose Zone Soil	ADPYQVIVQVILKYRGSFNTFAFGETKPHSGSFKDGRLDLVYHQTPGLSIGDLFPLWTLH
Ga0210403_107780711	3300020580	Soil	VFRELKPHTGFLKEGRLDLVYYQNPGLNAGDPFPLWTLH
Ga0210395_100105811	3300020582	Soil	HQVIVQISRKYRGSFNTLIFGEIKPYTGSLNENRLDLVYNQNPNLVVGDSFPLWTLR
Ga0210401_109406901	3300020583	Soil	SKYQGSVTTLVFGELKPHSGSLKEGRLDLVYYQNPGLNAGDPFPLWTLH
Ga0210404_103572562	3300021088	Soil	VIVQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLILLPGSGLNVGDQFPVWTLR
Ga0210406_113710381	3300021168	Soil	VWLQRNRELGISTKYRGSFNTLAFGEIKPYSGSLKDGWLDLVYYRDPGLTVGDQFPLWTL
Ga0210408_110467771	3300021178	Soil	QYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQNPGINIGDLFRLWTLN
Ga0213872_102701701	3300021361	Rhizosphere	AFGEIKAYSGALKDGRLDLLYYRDPDLNVGDPFPLWTLH
Ga0213877_100565711	3300021372	Bulk Soil	AFGEIKPYSGSLKDGRLDLIYYQNPALNAGDPFPLWTLA
Ga0210397_101252074	3300021403	Soil	QAIIQIGPKYRGSFNTLAFGDIKPYSGALKDGRVDLLYYRDPGLNVGDQFPLWTLH
Ga0210389_100380261	3300021404	Soil	RKNITFNTLIFGEIKPYTGSLNENRLDLVYNQNPNLVVGDSFPLWTLR
Ga0210394_103865972	3300021420	Soil	ISPKYRGSFNTLAFGEIKPHSGSLKEGRLDLVYYQDPGLNIGDPFRLWTLH
Ga0210384_115978582	3300021432	Soil	DARGWLQRNRELGISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLIYYRAPGLSVGDLFLLWTLHRRTSKKL
Ga0213879_100977762	3300021439	Bulk Soil	LAFGEIKPYSGSLKDGRLDLIYYQNPALNAGDPFPLWTLA
Ga0213878_100192003	3300021444	Bulk Soil	VIVEIIPKYRGSFNTLVFGDIKPQIGSLKDGRLDLLYYQNPGLNIGDPFPLWTLH
Ga0213878_100809272	3300021444	Bulk Soil	VKITNKYRGSFNTLLFGEIKPYSGSLKDGRLDLVYYRDPGLRAGDKFPLWTLH
Ga0210390_103316093	3300021474	Soil	TGDQYRVIVQISTKYRGSFNTLAFGEVKPYSGSLRDGRLDLVYHRSPGLEVGDPFPLWTL
Ga0210392_111394351	3300021475	Soil	QVIVQISRKYRGSFNTLAFGETKPLSGALKDGRLDLVYNQNPCLNIGDDFRLWTLH
Ga0207692_106209711	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLILLPGSGLNVGDQFPVWTLR
Ga0207699_102493231	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TKYRGSFNTLAFGEIKPYSGSLKDGRLDLILLPGSGLNVGDQFPVWTLR
Ga0207684_101651726	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AFEEIKPHSGSLKDGRLDLVYYQNPGLNIGDPFPLWTLH
Ga0207684_110447821	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KYRGSFNTLAFGEIKPHSGSLKDGRLDLVYHQNPGFNVGGPFPLWTLH
Ga0209647_11119492	3300026319	Grasslands Soil	TTKYRGSFNTLVFGDIKPYSGSLKDGRLDLVYYRDPGLNAGDQFPLWTLH
Ga0209648_103379393	3300026551	Grasslands Soil	LNTLAFGEIKPYSGSLKSGRLDLFYYRDPGLNGGDQFPLWTLH
Ga0209648_108413301	3300026551	Grasslands Soil	LAFGEIKPYSGSLKDGRLDLVYYRDPRLSVGEQFPLWTLH
Ga0179587_101226631	3300026557	Vadose Zone Soil	RGSFNTFAFGETKPHSGSFKDGRLDLVYHQTPGLSIGDLFPLWTLH
Ga0179587_106186743	3300026557	Vadose Zone Soil	QVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQNPGINIGDLFRLWTLH
Ga0209418_10519443	3300027371	Forest Soil	LAFGEIKPHSGSIKDGRLDLVYYQDPGINIGDPFQLWTLH
Ga0209524_10435331	3300027521	Forest Soil	VIVQIGPKYRGSFNTLAFGEIKPHSGFFKDGRLDLVYHKDPGFNIGDPFPLWTLH
Ga0209523_10338082	3300027548	Forest Soil	GSFNTLAFGEIKPHSGSFKDGRLDLVYHKDPGFNIGDPFPLWTLH
Ga0209446_10783352	3300027698	Bog Forest Soil	TPKYRGSFNTLAFGEIKPHSGSLKEGRLDLVYYQDPGLNIGDPFRLWTLH
Ga0209328_100762222	3300027727	Forest Soil	SPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYRQNPGFNIGDPFPLWTLH
Ga0209040_102318371	3300027824	Bog Forest Soil	FGEIKPHSGSLKDGRLDLVYYQNPGLNIGDPFPLWTLH
Ga0209040_104567852	3300027824	Bog Forest Soil	YQVIVQITQKHRGSFNTLVFGEIKPHSGSLKDGGLDLVYHQNPGLNIGDPFRLWTLH
Ga0209039_101204501	3300027825	Bog Forest Soil	FGEIKPHSGSLKEGRLDLVYYQDPGLNIGDPFRLWTLH
Ga0209590_105723091	3300027882	Vadose Zone Soil	SFNTLAFGEIKPHSGSLKDGRLDLVYYQNPGLNIGDPFPLWTLH
Ga0209275_107228861	3300027884	Soil	RLVNTLAFGEIKPYSGSLKDGRLDLIYYRDPGLNVGDPFPVWTLR
Ga0209488_105313613	3300027903	Vadose Zone Soil	VIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQNPGINIGDLFRLWTLH
Ga0308309_109770642	3300028906	Soil	VIVQISTKYRGSFNTLAFGEIKPYSGSLKEGRLDLIYYRDPGLNVGDEFPVWTLR
Ga0170824_1016235171	3300031231	Forest Soil	TLAFGEIKPYIGSLNDGRLDLVYYRDPGLSVGDQFPLWTLH
Ga0318573_106408431	3300031564	Soil	YQLVVEIVPKYRGSFNTLIFGEIKPHTGSLKDGRLDLVYFQNPGFHIGDRFPLWTLH
Ga0307474_102329354	3300031718	Hardwood Forest Soil	ISTKYRGSFNTLAFGEIKPYVGSLKDGRLDLVYYRNPGLDVGEEFPLWTLH
Ga0307469_115693281	3300031720	Hardwood Forest Soil	GPKYRGSFNTLTFGEIKPHSGSLRDGRLDLVYYQNPGLNIGDPFQLWTLH
Ga0318500_102268692	3300031724	Soil	VEIIPKYRGSFNTLVFGEIKPHSGSIKDGRLNLVYYQNPGLNIGDLFPLWTLH
Ga0318500_107102991	3300031724	Soil	YQVVVQITNKYRGSFNTLLFGEIKPYIGSLKDGRLDLVYYRDPGLRAGDQFPLWTLH
Ga0307477_101687724	3300031753	Hardwood Forest Soil	TLASGEIEPHIGSLKDGRLDLVYYRDPGLSEGDLFSLWTLH
Ga0307477_102806532	3300031753	Hardwood Forest Soil	KLGNHYQAIVHIMTKYRGSFDTLAFGEIKPYSGSLKNGRLDLVYYRDPGLKAGDNFPVWTLS
Ga0307477_103388762	3300031753	Hardwood Forest Soil	RGSFNTLAFGQIKPYSGSLKDGRLDLVYYRDPGLNVGDPFLVWTLH
Ga0307477_103521072	3300031753	Hardwood Forest Soil	TGNQYQVIVQISTKYRGSFNTLAFGEVKPYIGSLKDGRLDLIYYRDPGLEVGDPFPVWTL
Ga0307475_101363635	3300031754	Hardwood Forest Soil	SFNTLAFGEIKPYSGSLKGGRLDLVYYRDPGLNAGDHFPLWTLH
Ga0307475_101611573	3300031754	Hardwood Forest Soil	LAFGEIKPYVGSLKDGRLDLVYFRDPHLGIGDQFPLWTLH
Ga0307475_106019141	3300031754	Hardwood Forest Soil	SRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQDPGLNIGDPFPLWTLH
Ga0307475_107538321	3300031754	Hardwood Forest Soil	QYQVIVQISTNYRGSFNTLAFGEIKPYSGSLKDGRLDLVYYRDPGLTVGDQFALWTLH
Ga0307475_109931851	3300031754	Hardwood Forest Soil	DQPKYRGSFNTLAFGDIKPYIGSLKDRRLDLIYYRDPGLEVGDPFPVWTLH
Ga0318576_105869441	3300031796	Soil	QVIVQISPKYRGSFNTLAFGAIKPHSGSLRDGRLDLVYYQNPRLSVGDPFPLWTLH
Ga0307478_100279431	3300031823	Hardwood Forest Soil	FGEIKPYSGSLKDGRLDLVYYRDPGLTVGDQFALWTLH
Ga0307478_105839822	3300031823	Hardwood Forest Soil	CQISTKYRGSFNTLAFGEVKPYSGSLKDGRLDLLYFRDPHLEVGDQFPVWTLR
Ga0307478_111579401	3300031823	Hardwood Forest Soil	QVVVQIANKYRGSFNTLAFGEIKPYSGSLKDGRLDLVYYLDPGLKAGDQFPLWTLH
Ga0306925_122467251	3300031890	Soil	FNTLAFGEIKPHSGSLRDGRLDLVYFQNPGLSVEDPFPLWTLH
Ga0318520_103568961	3300031897	Soil	SSNKAEYQVVVQISPKYRRSFNTLAFGEIKPHGGSLKDGRLELVYYQNPGLTIGDPFPLWTLH
Ga0306923_115711082	3300031910	Soil	ELKPHTGFLKEGRLDLVYYQNPGLNAGDPFQLWTLH
Ga0306921_1000363215	3300031912	Soil	VVVQISPKYRRSFNTLAFGEIKPHGGSLKDGRLELVYYQNPGLTIGDPFPLWTLH
Ga0306921_103573314	3300031912	Soil	YRGSFNTLAFGEIKPHSGSLRDGRLDLVYYQNPGLSAEDPFPLWTLH
Ga0306921_117883491	3300031912	Soil	YQVIVQISPKYRGSFNTLAFGAIKPQSGSLRDGRLDLVYYQNPGLSVGDPFPLWTLH
Ga0306921_124301792	3300031912	Soil	FGEIKPYSGSLKEGRLDLVYYRDPGLSVGDPFPLWTLH
Ga0310909_103337842	3300031947	Soil	VEIVPKYRGSFNTLIFGEIKPHTGSLKDGRLDLVYFQNPGFHIGDRFPLWTLH
Ga0310909_107599342	3300031947	Soil	GSFNTLAFGEIKPYSGSLKDGRLDLVYYRDPGLTVGGRFPLWKLR
Ga0310909_111077511	3300031947	Soil	GSFNTLAFGAIKPHSGSLRDGRLDLVYYQNPGLNVGDPFPLWTLH
Ga0306926_121168101	3300031954	Soil	FGELKPHTGFLKEGRLDLVYYQNPGLNAGDPFQLWTLH
Ga0307479_107571504	3300031962	Hardwood Forest Soil	FNTLAFGEIKPYSGSLKDGRLDLVYYRDPGLNVADQFPLWTLH
Ga0307479_117432111	3300031962	Hardwood Forest Soil	SLLERSKPYIGSLKDGRLDLIYYRDPGLKVGDPFPLWILH
Ga0306922_105448832	3300032001	Soil	RGSFNMLAFGEIKPYSGSLKDGRLDLVYHRDPGLRAGDQFPLWTLH
Ga0318533_108466781	3300032059	Soil	VFGEIKPHSGSLKDGRLDLVYYQNPGLGIGDLFPLWTLR
Ga0306924_107712991	3300032076	Soil	NGIVQIRPKYRGSFNTLAFGAIKPHSGSLRDGRLDLVYYQNPGLNVGDPFPLWTLH
Ga0335081_106783041	3300032892	Soil	RDSPNTLAFGEIKPHSGSLKDGRLDLVYYQVPGLNIGDPLPLWTLH
Ga0335076_103443863	3300032955	Soil	YRGSFNTLVFGEIKPYSGSLKDGRLDLIYYRDPGLAIGDPFPLWTLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences