Metagenome / Metatranscriptome Family F062934

Basic Information
Family ID	F062934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	57 residues
Representative Sequence	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Number of Associated Samples	99
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.68 %
% of genes near scaffold ends (potentially truncated)	35.38 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (93.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.462 % of family members)
Environment Ontology (ENVO)	Unclassified (41.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.923 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.32% β-sheet: 0.00% Coil/Unstructured: 40.68%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00313	CSD	58.46
PF00497	SBP_bac_3	10.77
PF12833	HTH_18	6.92
PF00487	FA_desaturase	5.38
PF12840	HTH_20	2.31
PF11794	HpaB_N	0.77
PF13458	Peripla_BP_6	0.77
PF00165	HTH_AraC	0.77
PF05592	Bac_rhamnosid	0.77
PF07728	AAA_5	0.77
PF00494	SQS_PSY	0.77
PF05656	DUF805	0.77
PF06240	COXG	0.77
PF00395	SLH	0.77
PF00561	Abhydrolase_1	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	5.38
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	5.38
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.77
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.77
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.77
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.62 %
Unclassified	root	N/A	5.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.62 %
Unclassified	root	N/A	5.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.85 %
Unclassified	root	N/A	5.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.46 %
Unclassified	root	N/A	5.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.08 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.08 %
Unclassified	root	N/A	5.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.08 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.00 %
Unclassified	root	N/A	5.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.08 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.31 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.92 %
Unclassified	root	N/A	5.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.77 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.77 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.38 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	0.77 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10013067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	5416	Open in IMG/M
3300000567\|JGI12270J11330_10258867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	557	Open in IMG/M
3300001471\|JGI12712J15308_10041203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1181	Open in IMG/M
3300001593\|JGI12635J15846_10585124	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300001593\|JGI12635J15846_10756841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300002245\|JGIcombinedJ26739_100559503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1021	Open in IMG/M
3300002245\|JGIcombinedJ26739_100859047	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300002245\|JGIcombinedJ26739_101211477	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300003505\|JGIcombinedJ51221_10065061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
3300004082\|Ga0062384_101038821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300004091\|Ga0062387_100339739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	986	Open in IMG/M
3300004100\|Ga0058904_1014183	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300004121\|Ga0058882_1772890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300004137\|Ga0058883_1553812	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005591\|Ga0070761_10379773	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300005591\|Ga0070761_10868032	Not Available	570	Open in IMG/M
3300005602\|Ga0070762_10033595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2758	Open in IMG/M
3300005602\|Ga0070762_10279141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1047	Open in IMG/M
3300005610\|Ga0070763_10155151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1198	Open in IMG/M
3300005610\|Ga0070763_10651974	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300005610\|Ga0070763_10654218	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300005921\|Ga0070766_10047757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2395	Open in IMG/M
3300005921\|Ga0070766_10074262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1965	Open in IMG/M
3300006050\|Ga0075028_100335304	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300006162\|Ga0075030_100371230	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300006176\|Ga0070765_100261985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1588	Open in IMG/M
3300006176\|Ga0070765_100404692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1274	Open in IMG/M
3300006176\|Ga0070765_100584452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1053	Open in IMG/M
3300006176\|Ga0070765_100713161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	947	Open in IMG/M
3300006176\|Ga0070765_100792454	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300006176\|Ga0070765_101604762	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300006893\|Ga0073928_10117225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2201	Open in IMG/M
3300006893\|Ga0073928_10632161	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300009519\|Ga0116108_1138070	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300009520\|Ga0116214_1033589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1851	Open in IMG/M
3300009521\|Ga0116222_1006222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5824	Open in IMG/M
3300009521\|Ga0116222_1131421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300009523\|Ga0116221_1430052	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300010379\|Ga0136449_101101973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1264	Open in IMG/M
3300011066\|Ga0138524_1140806	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300014158\|Ga0181521_10100644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1775	Open in IMG/M
3300014501\|Ga0182024_10083548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4744	Open in IMG/M
3300014657\|Ga0181522_10228832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300015089\|Ga0167643_1050492	Not Available	631	Open in IMG/M
3300017935\|Ga0187848_10224096	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300017940\|Ga0187853_10350342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	660	Open in IMG/M
3300017946\|Ga0187879_10085510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1818	Open in IMG/M
3300019182\|Ga0184598_104294	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300019185\|Ga0184587_135272	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300019268\|Ga0181514_1249601	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300019270\|Ga0181512_1198768	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300019888\|Ga0193751_1146757	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M
3300020581\|Ga0210399_10076358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2717	Open in IMG/M
3300020582\|Ga0210395_10047282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3150	Open in IMG/M
3300020582\|Ga0210395_10293429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1223	Open in IMG/M
3300021168\|Ga0210406_10479866	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300021171\|Ga0210405_10027454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4574	Open in IMG/M
3300021178\|Ga0210408_10052472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3188	Open in IMG/M
3300021180\|Ga0210396_10000015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	438688	Open in IMG/M
3300021180\|Ga0210396_10058969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3507	Open in IMG/M
3300021181\|Ga0210388_10283059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1456	Open in IMG/M
3300021181\|Ga0210388_10871979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	777	Open in IMG/M
3300021403\|Ga0210397_10195144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1444	Open in IMG/M
3300021404\|Ga0210389_10054240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3073	Open in IMG/M
3300021405\|Ga0210387_10097310	All Organisms → cellular organisms → Bacteria → Proteobacteria	2455	Open in IMG/M
3300021405\|Ga0210387_11764043	Not Available	522	Open in IMG/M
3300021406\|Ga0210386_10488535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1064	Open in IMG/M
3300021407\|Ga0210383_10343049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1287	Open in IMG/M
3300021407\|Ga0210383_10596542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300021474\|Ga0210390_10057653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3199	Open in IMG/M
3300021478\|Ga0210402_10838667	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300021479\|Ga0210410_10681495	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300022503\|Ga0242650_1023903	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300022506\|Ga0242648_1080361	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300022509\|Ga0242649_1081080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300022522\|Ga0242659_1075072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300022532\|Ga0242655_10191266	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300022532\|Ga0242655_10287786	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300022533\|Ga0242662_10096018	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300022714\|Ga0242671_1094353	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300022714\|Ga0242671_1121803	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300022715\|Ga0242678_1052468	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	593	Open in IMG/M
3300022717\|Ga0242661_1124885	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300022720\|Ga0242672_1136689	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300022721\|Ga0242666_1113236	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300022722\|Ga0242657_1169652	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300023030\|Ga0224561_1019366	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300023656\|Ga0247547_103772	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300024225\|Ga0224572_1015101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300025509\|Ga0208848_1034710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1094	Open in IMG/M
3300027370\|Ga0209010_1001316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6425	Open in IMG/M
3300027521\|Ga0209524_1019628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1395	Open in IMG/M
3300027562\|Ga0209735_1019194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1389	Open in IMG/M
3300027567\|Ga0209115_1000533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5716	Open in IMG/M
3300027568\|Ga0208042_1157808	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300027660\|Ga0209736_1129471	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300027767\|Ga0209655_10175480	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300027854\|Ga0209517_10580357	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300027869\|Ga0209579_10099542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1540	Open in IMG/M
3300027879\|Ga0209169_10213883	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300027908\|Ga0209006_10465282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1058	Open in IMG/M
3300028906\|Ga0308309_10624773	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300030740\|Ga0265460_12338227	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300030762\|Ga0265775_115031	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300030814\|Ga0265741_106835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	756	Open in IMG/M
3300030863\|Ga0265766_1021914	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300030916\|Ga0075386_11813537	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300030923\|Ga0138296_1132138	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300030963\|Ga0265768_110935	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300031090\|Ga0265760_10003498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4557	Open in IMG/M
3300031231\|Ga0170824_110859444	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300031474\|Ga0170818_101650308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	858	Open in IMG/M
3300031708\|Ga0310686_101146347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779	Open in IMG/M
3300031708\|Ga0310686_106023862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5001	Open in IMG/M
3300031715\|Ga0307476_10001217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16117	Open in IMG/M
3300031715\|Ga0307476_10329544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1122	Open in IMG/M
3300031715\|Ga0307476_10350568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300031753\|Ga0307477_10871948	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300031754\|Ga0307475_10741612	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300031823\|Ga0307478_11005475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	697	Open in IMG/M
3300032120\|Ga0316053_116172	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300032120\|Ga0316053_121173	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300032160\|Ga0311301_10110172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5288	Open in IMG/M
3300032160\|Ga0311301_10241456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2999	Open in IMG/M
3300032160\|Ga0311301_10844782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1247	Open in IMG/M
3300032515\|Ga0348332_13013820	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.23%
Host-Associated	Host-Associated	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.38%
Aquatic	Environmental → Aquatic	13.85%
Plants	Host-Associated → Plants	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.62%
Freshwater	Environmental → Aquatic → Freshwater	10.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.54%
Sediment	Environmental → Aquatic → Sediment	1.54%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.46%
Loam	Environmental → Terrestrial → Soil → Loam	25.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.00%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	13.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.54%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011066	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300019182	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300023656	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030762	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030863	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100130677	3300000567	Peatlands Soil	VRTRTPAGGIASKEFKQKLKSGKSKKRPARRAIILKSASWYANAALSIGISAKAENSTH*
JGI12270J11330_102588672	3300000567	Peatlands Soil	VRTRAPAGGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAETSTH*
JGI12712J15308_100412033	3300001471	Forest Soil	VRTRAPAGGIASKEPKQNLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
JGI12635J15846_105851241	3300001593	Forest Soil	VRTRAPAGGIASRELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH*
JGI12635J15846_107568411	3300001593	Forest Soil	VRTRAPAGGIASRELKQKLKNVKSRKRPARRAIILKSASWYANAALSIGISAKAESSTH*
JGIcombinedJ26739_1005595033	3300002245	Forest Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAE
JGIcombinedJ26739_1008590471	3300002245	Forest Soil	VRTRAPAGGIASKELKQKLKNVKPGKRPARRAIILKSASWYASAALSIGISAKAETGTH*
JGIcombinedJ26739_1012114771	3300002245	Forest Soil	VRTRTPAGGIASKELKQKLKSGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
JGIcombinedJ51221_100650614	3300003505	Forest Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
Ga0062384_1010388212	3300004082	Bog Forest Soil	GIASKELKQKLKNVKSKKRPARRAIILKSASWYANAAMSIGISAKAETTH*
Ga0062387_1003397392	3300004091	Bog Forest Soil	VRTRAPAGGIASRELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAETSTH*
Ga0062387_1009537722	3300004091	Bog Forest Soil	VRVIHITSKALKQKLKNSKSKKRTARRLAVFKSASWYANAAMSIGVRGKA*
Ga0062389_1023673991	3300004092	Bog Forest Soil	ITSKALKQKLKNSKSKKRTARRLAVFKSASWYANAAMSIGVRGKA*
Ga0062389_1023994921	3300004092	Bog Forest Soil	ITSKALKQKLKNSKSKKRTARRSAVFKSASWYASAAMSIGVRAKA*
Ga0058904_10141831	3300004100	Forest Soil	VRTRTPAGGIASKELKQKPKNVKSKKRPARRAIILKSASWYANAALSIGISAKA*
Ga0058882_17728902	3300004121	Forest Soil	VRTRAPAGGIASREFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPSTH*
Ga0058883_15538121	3300004137	Forest Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISARAESRT
Ga0070732_109631382	3300005542	Surface Soil	VRERVRVSPVTSKEFRQKLKNVKSKKRKTTGRSAVFKSASWYENAALSIGVSAKA*
Ga0070761_103797732	3300005591	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAETSTH*
Ga0070761_108680321	3300005591	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
Ga0070762_100335953	3300005602	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH*
Ga0070762_102791413	3300005602	Soil	VRTRAPAGGIASRELKQKLKNVKPGKRPARRAIILKSASWYASAALSIGISAKAESSTH*
Ga0070763_101551513	3300005610	Soil	VRTRAPAGGIASKELKQKLKNVKSRKRPARRAIILKSASWYANAALSIGISAKAETRTH*
Ga0070763_106519742	3300005610	Soil	VRTRTPAGGIASKELKQKLKSGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH*
Ga0070763_106542181	3300005610	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAE
Ga0070766_100477574	3300005921	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAESRTH*
Ga0070766_100742623	3300005921	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPSH*
Ga0075028_1003353043	3300006050	Watersheds	VRTRTPAGGIASKELKQKLKNRKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH*
Ga0075030_1003712303	3300006162	Watersheds	VRTRTPTGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH*
Ga0070765_1002619853	3300006176	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
Ga0070765_1004046921	3300006176	Soil	VRTRTPAGGIASKELKQKLKSGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH*
Ga0070765_1005844522	3300006176	Soil	VRTRAPAGGIASRELKQKLKNVKPGKRPARRAIILKSASWYASAALSIGISAKAEPSTH*
Ga0070765_1007131611	3300006176	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGIS
Ga0070765_1007924543	3300006176	Soil	PAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH*
Ga0070765_1016047622	3300006176	Soil	SKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
Ga0073928_101172252	3300006893	Iron-Sulfur Acid Spring	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH*
Ga0073928_106321611	3300006893	Iron-Sulfur Acid Spring	GRFFVRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH*
Ga0116108_11380701	3300009519	Peatland	VRTRAPAGGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAESSTH*
Ga0116214_10335891	3300009520	Peatlands Soil	VRTRAPAGGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAENSTH*
Ga0116222_10062228	3300009521	Peatlands Soil	VRTRTPAGGIASKEFKQKLKSGKSKKRPARRAIILKSASWYSNAALSIGISAKAENSTH*
Ga0116222_11314211	3300009521	Peatlands Soil	VRTRAPAGGIASKELKQKLKSGKSKKGPARRAIVLKSASWYANAALSIGISAKA
Ga0116221_14300522	3300009523	Peatlands Soil	VRTRAPAGGIASKELKQKLKNVKAKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
Ga0136449_1011019733	3300010379	Peatlands Soil	SRELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH*
Ga0138524_11408061	3300011066	Peatlands Soil	VRTRTPAGGIASKEFKQKLKSGKSKKRPARRAIILKSASWYANAALSIGISAK
Ga0181521_101006443	3300014158	Bog	GGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAETSTH*
Ga0182024_100835483	3300014501	Permafrost	VRTRTPAGGIASKELKQKSKNVKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH*
Ga0181522_102288322	3300014657	Bog	VRTRAPAGGIASKELKQKLKNGKAKKRPARRAIILKSASWYANAALSIGISAKAETRTH*
Ga0167643_10504922	3300015089	Glacier Forefield Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH*
Ga0187848_102240962	3300017935	Peatland	VRTRAPAGGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAESSTH
Ga0187853_103503422	3300017940	Peatland	VRTRAPAGGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAETSTH
Ga0187879_100855101	3300017946	Peatland	VRTRAPAGGIASKDFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGVSAKAETSAH
Ga0184598_1042941	3300019182	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAESRT
Ga0184587_1352721	3300019185	Soil	VRTRAPSGSIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIG
Ga0181514_12496012	3300019268	Peatland	VRTRAPAGGIASKELKQKLKNGKAKKRPARRAIILKSASWYANAALSIGISAKTENRTH
Ga0181512_11987682	3300019270	Peatland	VRTRAPTGGIASKELKQKLKNGKAKKRPARRAIILKSASWYANAALSIGISAKTEN
Ga0193751_11467573	3300019888	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKTEPRTH
Ga0210399_100763583	3300020581	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAEPRT
Ga0210395_100472825	3300020582	Soil	VRTRVQVGRITSNGIKQKLKNVKSKKGTAHRSVILKSASWYANAALSIGVSAKGESGTH
Ga0210395_102934291	3300020582	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0210406_104798663	3300021168	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0210405_100274547	3300021171	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISARAESRTH
Ga0210408_100524722	3300021178	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH
Ga0210396_10000015233	3300021180	Soil	VRTRTPAGGIASKELKQKLKNGKFKKRPARRAIVLKSASWYANAALSIGISARAESRTH
Ga0210396_100589692	3300021180	Soil	VRTRVQVGRITSNGIKQKLKNVKSKKGTARRSVILKSASWYANAALSIGVSAKGESGTH
Ga0210388_102830592	3300021181	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAETSTH
Ga0210388_108719793	3300021181	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALS
Ga0210397_101951443	3300021403	Soil	VRTRAPAAGIASKGLKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0210389_100542403	3300021404	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0210387_100973102	3300021405	Soil	VRTRTPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0210387_117640432	3300021405	Soil	RAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0210386_104885352	3300021406	Soil	VRTRAPAGGIASREFKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPSTH
Ga0210383_103430492	3300021407	Soil	VRTRAPAGGIASRELKQKLKNVKPGKRPARRAIILKSASWYASAALSIGISAKAESSTH
Ga0210383_105965422	3300021407	Soil	VRTRTPAGGVASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAENRTH
Ga0210390_100576536	3300021474	Soil	VRTRVQVGRITSNGIKQKLKNVKSKKGTARRSVILKSASWYANAALSIEVSAK
Ga0210402_108386672	3300021478	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH
Ga0210410_106814952	3300021479	Soil	MSADCRIVGRFFVRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0242650_10239032	3300022503	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAE
Ga0242648_10803611	3300022506	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISARAESRTH
Ga0242649_10810801	3300022509	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAES
Ga0242659_10750722	3300022522	Soil	VRTRAPAGGIASREFKQKLKSGKSKKRPARRAIILKSASWYANAALSIGISAKAEPSTH
Ga0242655_101912661	3300022532	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAETGT
Ga0242655_102877862	3300022532	Soil	VRTRTPAGGIASKELKQKPKNVKSKKRPARRAIILKSASWYANAALSIGISAKA
Ga0242662_100960182	3300022533	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSLAISAKAESRTH
Ga0242671_10943531	3300022714	Soil	VRTRAPASGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0242671_11218031	3300022714	Soil	VRTRTPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEP
Ga0242678_10524683	3300022715	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPR
Ga0242661_11248852	3300022717	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSATWYANAALSIGISAKAESRTH
Ga0242672_11366892	3300022720	Soil	VRTRAPAGGIASKELKQKLKNVKSKKGTARRSVILKSASWYANAALSIGVSAKGESG
Ga0242666_11132361	3300022721	Soil	VRTRAPSGGIASKEFKQKLKSVKSKSKKRPARRAIILKSASWYANAALSIGISAKAESRT
Ga0242657_11696521	3300022722	Soil	VRTRAPAGGISSKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0224561_10193663	3300023030	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKA
Ga0247547_1037721	3300023656	Soil	VRTRTPAGGIASKAFKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEP
Ga0224572_10151011	3300024225	Rhizosphere	VRTRAPSGSIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSI
Ga0208848_10347102	3300025509	Arctic Peat Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKTASWYANAALSIGISAKAESRTH
Ga0209010_10013167	3300027370	Forest Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAENRTH
Ga0209524_10196281	3300027521	Forest Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISA
Ga0209735_10191942	3300027562	Forest Soil	VRTRAPAGGIASKEPKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0209115_10005334	3300027567	Forest Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0208042_11578081	3300027568	Peatlands Soil	VRTRTPAGGIASKEFKQKLKSGKSKKRPARRAIILKSASWYANAALSIGISAKAENSTH
Ga0209736_11294711	3300027660	Forest Soil	VRTRAPAGGIASRELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0209655_101754803	3300027767	Bog Forest Soil	VRTRTPAGGIASRELKQKLKNVKSKKRPVRRAIILKSASWYANAALSI
Ga0209517_105803571	3300027854	Peatlands Soil	VRTRAPSGGIASKEFKQKLKSVKSKKRPARRAIILKSASWYANAALSIGISAKAENSTH
Ga0209579_100995422	3300027869	Surface Soil	VRTRAPAGGIAAKEFKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESSTH
Ga0209169_102138832	3300027879	Soil	IASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAESRTH
Ga0209006_104652821	3300027908	Forest Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKA
Ga0308309_106247731	3300028906	Soil	TRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0265460_123382272	3300030740	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAEPR
Ga0265775_1150312	3300030762	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAENR
Ga0265741_1068353	3300030814	Soil	VRTRAPAGGIASRELKQKLKNVKPGKRPARRAIILKSASWYASAALSIGISA
Ga0265766_10219141	3300030863	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEP
Ga0075386_118135372	3300030916	Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGI
Ga0138296_11321381	3300030923	Soil	VRTRTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSI
Ga0265768_1109352	3300030963	Soil	VRTRTPAGGIASKEVKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH
Ga0265760_100034982	3300031090	Soil	VRTRTPAGGVASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAETRTH
Ga0170824_1108594442	3300031231	Forest Soil	VRTRTPAGGIASKELKQKLTNGKSKKRPARRAIVLKSASWYANAALSIGISAKAEPRTH
Ga0170818_1016503083	3300031474	Forest Soil	VRTRAPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSI
Ga0310686_1011463473	3300031708	Soil	VRTRTPAGGIASKAFKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0310686_1060238624	3300031708	Soil	VRTRAPSGSIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISAKAESRT
Ga0307476_1000121716	3300031715	Hardwood Forest Soil	VRTRAPAGGIASRELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAESSTH
Ga0307476_103295442	3300031715	Hardwood Forest Soil	VRTRTPAGGIASKEVKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0307476_103505681	3300031715	Hardwood Forest Soil	SKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0307477_108719482	3300031753	Hardwood Forest Soil	VRTRAPAGGIASKELEQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0307475_107416123	3300031754	Hardwood Forest Soil	VRTRTPAGGIASKELKQKPKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESR
Ga0307478_110054752	3300031823	Hardwood Forest Soil	RTPAGGIASKELKQKLKNGKSKKRPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0316053_1161722	3300032120	Soil	VRTRAPSGGIASKEFKQKLKNVKSKSKKRPARRAIILKSASWYANAALSIGISA
Ga0316053_1211732	3300032120	Soil	VRTRAPAGGIASKELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPR
Ga0311301_101101724	3300032160	Peatlands Soil	VRTRAPAGGIASKELKQKLKNVKAKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0311301_102414563	3300032160	Peatlands Soil	VRTRAPAGGIASKELKQKLKSGKSKKGPARRAIVLKSASWYANAALSIGISAKAESRTH
Ga0311301_108447821	3300032160	Peatlands Soil	DIASRELKQKLKNVKSKKRPARRAIILKSASWYANAALSIGISAKAEPRTH
Ga0348332_130138202	3300032515	Plant Litter	VRTRVQVAHITSKELKRKLKNLKSKKRPARRATILKSASWYANAALTIGVSAKAESG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign