Metagenome / Metatranscriptome Family F062918

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062918
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	66 residues
Representative Sequence	MACRSCGSENQTEFGAEINIHFPGLKNLDKPAVLVFPKLVVCLDCGFTQFALPEAELRYLAQGIAA
Number of Associated Samples	82
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.61 %
% of genes near scaffold ends (potentially truncated)	19.23 %
% of genes from short scaffolds (< 2000 bps)	75.38 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.64% β-sheet: 20.21% Coil/Unstructured: 69.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00072	Response_reg	20.00
PF14417	MEDS	7.69
PF02518	HATPase_c	3.08
PF13493	DUF4118	2.31
PF00196	GerE	1.54
PF13426	PAS_9	1.54
PF00079	Serpin	1.54
PF02082	Rrf2	1.54
PF13469	Sulfotransfer_3	0.77
PF04237	YjbR	0.77
PF00484	Pro_CA	0.77
PF01872	RibD_C	0.77
PF13531	SBP_bac_11	0.77
PF07730	HisKA_3	0.77
PF13188	PAS_8	0.77
PF11074	DUF2779	0.77
PF04545	Sigma70_r4	0.77
PF01545	Cation_efflux	0.77
PF12833	HTH_18	0.77
PF14534	DUF4440	0.77
PF07687	M20_dimer	0.77
PF13176	TPR_7	0.77
PF00239	Resolvase	0.77
PF02586	SRAP	0.77
PF11737	DUF3300	0.77
PF00486	Trans_reg_C	0.77
PF13180	PDZ_2	0.77
PF13183	Fer4_8	0.77
PF00962	A_deaminase	0.77
PF13519	VWA_2	0.77
PF14294	DUF4372	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.54
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	1.54
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	1.54
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	1.54
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.54
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	1.54
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	1.54
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.54
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	1.54
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.77
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.77
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.77
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.77
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.77
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.77
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.77
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.77
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.77
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.77
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.77
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.77
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.77
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.77
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.08 %
Unclassified	root	N/A	6.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.31 %
Unclassified	root	N/A	6.92 %
Viruses	superkingdom	All Organisms → Viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	6.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.38 %
Unclassified	root	N/A	6.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.46 %
Unclassified	root	N/A	6.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.46 %
Unclassified	root	N/A	6.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.46 %
Unclassified	root	N/A	6.92 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.69 %
Unclassified	root	N/A	6.92 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.77 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.77 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.69 %
Unclassified	root	N/A	6.92 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.77 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.77 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.69 %
Unclassified	root	N/A	6.92 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.77 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.77 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12956170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300003351\|JGI26346J50198_1005926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1177	Open in IMG/M
3300003505\|JGIcombinedJ51221_10000816	All Organisms → cellular organisms → Bacteria	7333	Open in IMG/M
3300004091\|Ga0062387_100326634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300004092\|Ga0062389_100415373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1469	Open in IMG/M
3300004092\|Ga0062389_100974252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300004114\|Ga0062593_102005188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300005437\|Ga0070710_10916132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300005541\|Ga0070733_10679044	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	691	Open in IMG/M
3300005542\|Ga0070732_10045634	All Organisms → cellular organisms → Bacteria → Acidobacteria	2525	Open in IMG/M
3300005546\|Ga0070696_101604344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300006176\|Ga0070765_101497432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300006954\|Ga0079219_11924628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009038\|Ga0099829_10004614	All Organisms → cellular organisms → Bacteria → Acidobacteria	8238	Open in IMG/M
3300009698\|Ga0116216_10850245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300009839\|Ga0116223_10279523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300010343\|Ga0074044_10132262	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300010343\|Ga0074044_10174056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1435	Open in IMG/M
3300010343\|Ga0074044_10719946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300010379\|Ga0136449_104025063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300011120\|Ga0150983_16008056	All Organisms → cellular organisms → Bacteria	4988	Open in IMG/M
3300012202\|Ga0137363_11081654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	682	Open in IMG/M
3300012203\|Ga0137399_10598852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300012350\|Ga0137372_10083984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2705	Open in IMG/M
3300012924\|Ga0137413_11754369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012925\|Ga0137419_10608140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300012925\|Ga0137419_11289179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300014162\|Ga0181538_10065561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2213	Open in IMG/M
3300014164\|Ga0181532_10001874	All Organisms → cellular organisms → Bacteria	19952	Open in IMG/M
3300014164\|Ga0181532_10025654	All Organisms → cellular organisms → Bacteria	4179	Open in IMG/M
3300014200\|Ga0181526_10267610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300015373\|Ga0132257_104379808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300015374\|Ga0132255_100153670	All Organisms → cellular organisms → Bacteria → Acidobacteria	3211	Open in IMG/M
3300016702\|Ga0181511_1223991	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300016702\|Ga0181511_1430983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2341	Open in IMG/M
3300016750\|Ga0181505_10649620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300017822\|Ga0187802_10186956	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300017823\|Ga0187818_10088770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1336	Open in IMG/M
3300017823\|Ga0187818_10122039	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300017823\|Ga0187818_10219707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300017823\|Ga0187818_10261620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300017823\|Ga0187818_10419654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300017823\|Ga0187818_10426389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300017926\|Ga0187807_1211644	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300017928\|Ga0187806_1079434	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300017928\|Ga0187806_1296327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300017932\|Ga0187814_10330130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300017932\|Ga0187814_10405140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300017933\|Ga0187801_10045920	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300017933\|Ga0187801_10239885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300017933\|Ga0187801_10380096	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300017934\|Ga0187803_10262191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300017942\|Ga0187808_10344240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300017943\|Ga0187819_10071861	All Organisms → cellular organisms → Bacteria → Acidobacteria	2059	Open in IMG/M
3300017943\|Ga0187819_10105563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1682	Open in IMG/M
3300017943\|Ga0187819_10115443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	1603	Open in IMG/M
3300017943\|Ga0187819_10148137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1398	Open in IMG/M
3300017943\|Ga0187819_10192923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300017943\|Ga0187819_10196289	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300017943\|Ga0187819_10513899	Not Available	683	Open in IMG/M
3300017943\|Ga0187819_10766539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300017955\|Ga0187817_10063988	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300017955\|Ga0187817_10067591	All Organisms → cellular organisms → Bacteria → Acidobacteria	2220	Open in IMG/M
3300017955\|Ga0187817_10071387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2161	Open in IMG/M
3300017955\|Ga0187817_10140810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1531	Open in IMG/M
3300017955\|Ga0187817_10219105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300017955\|Ga0187817_10558168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300017955\|Ga0187817_10606792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300017966\|Ga0187776_10126396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300017966\|Ga0187776_11255088	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300017995\|Ga0187816_10554149	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300018001\|Ga0187815_10032813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2201	Open in IMG/M
3300018001\|Ga0187815_10066436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300018001\|Ga0187815_10075853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1413	Open in IMG/M
3300018001\|Ga0187815_10369755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300018032\|Ga0187788_10509283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300019882\|Ga0193713_1194504	Not Available	520	Open in IMG/M
3300020579\|Ga0210407_10116239	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300020580\|Ga0210403_10244711	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300020581\|Ga0210399_10909290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300020582\|Ga0210395_10017883	All Organisms → cellular organisms → Bacteria → Acidobacteria	5211	Open in IMG/M
3300020582\|Ga0210395_10092357	All Organisms → cellular organisms → Bacteria → Acidobacteria	2234	Open in IMG/M
3300020583\|Ga0210401_10006111	All Organisms → cellular organisms → Bacteria → Acidobacteria	12297	Open in IMG/M
3300020583\|Ga0210401_10047759	All Organisms → cellular organisms → Bacteria	4048	Open in IMG/M
3300020583\|Ga0210401_10982914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300021170\|Ga0210400_10495858	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300021403\|Ga0210397_11636690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300021405\|Ga0210387_11646134	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300021420\|Ga0210394_10385818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1232	Open in IMG/M
3300021420\|Ga0210394_10537833	All Organisms → Viruses → Predicted Viral	1028	Open in IMG/M
3300021478\|Ga0210402_10081273	All Organisms → cellular organisms → Bacteria → Acidobacteria	2883	Open in IMG/M
3300021478\|Ga0210402_10337606	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300021478\|Ga0210402_11744004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021559\|Ga0210409_10340999	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300022504\|Ga0242642_1063553	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300025898\|Ga0207692_10180054	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300027698\|Ga0209446_1095669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300027783\|Ga0209448_10000070	All Organisms → cellular organisms → Bacteria → Acidobacteria	36788	Open in IMG/M
3300027783\|Ga0209448_10014709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2540	Open in IMG/M
3300027783\|Ga0209448_10098813	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300027783\|Ga0209448_10276458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300027846\|Ga0209180_10012773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4366	Open in IMG/M
3300028015\|Ga0265353_1021160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300030659\|Ga0316363_10345227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300030945\|Ga0075373_11297401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300031040\|Ga0265754_1008384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300031057\|Ga0170834_102430987	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300031057\|Ga0170834_105338760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300031128\|Ga0170823_12343213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1338	Open in IMG/M
3300031128\|Ga0170823_13244834	Not Available	610	Open in IMG/M
3300031231\|Ga0170824_110503363	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300031231\|Ga0170824_115970456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300031231\|Ga0170824_121640252	All Organisms → cellular organisms → Bacteria → Acidobacteria	2011	Open in IMG/M
3300031446\|Ga0170820_17059795	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031474\|Ga0170818_100392552	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031474\|Ga0170818_106278797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031718\|Ga0307474_10622493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031912\|Ga0306921_12487273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300031962\|Ga0307479_11041314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300031962\|Ga0307479_11502837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300032180\|Ga0307471_100439533	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300032893\|Ga0335069_10230493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2238	Open in IMG/M
3300032893\|Ga0335069_10872918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300034090\|Ga0326723_0604827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.46%
Host-Associated	Host-Associated	1.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.15%
Aquatic	Environmental → Aquatic	42.31%
Plants	Host-Associated → Plants	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.38%
Freshwater	Environmental → Aquatic → Freshwater	42.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.54%
Peat	Environmental → Terrestrial → Peat	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	42.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.15%
Loam	Environmental → Terrestrial → Soil → Loam	4.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	30.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.08%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.31%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_129561701	3300000789	Soil	MACRSCGSQNQTEFGGEINVHFPGLKNLDKPAVFLFPKLLVCLDCGFTEFTITKTDLRLLGAGVEA*
JGI26346J50198_10059262	3300003351	Bog Forest Soil	MVGSGISQAVTTCRSCGSEDQTQFNSEIMIHFSGLKHLSNPGVLVFPRLLVCLDCGVSQFALPERELGQLKETIAA*
JGIcombinedJ51221_100008166	3300003505	Forest Soil	MTCRSCGSENQTQFVSEIMIHFAGLRNLDKPGALVFPKVLVCLDCGVSQFSLTQGELGLLKANIAA*
Ga0062387_1003266342	3300004091	Bog Forest Soil	MACRSCGSENQTEFGTEINIHFPGRKGLDKPAVLVFPKLVVCLNCGFTQFALPEAQLLLLREGLAA*
Ga0062389_1004153732	3300004092	Bog Forest Soil	MACNSCGSENRTEFGAEINIHFPGWKGLDKPSVLIFPKLVVCLECGFAQFTLPEAELRLLQEGAAA*
Ga0062389_1009742522	3300004092	Bog Forest Soil	VSKGAEKAIMACRSCGSANRTEFGAEINIHFPGWKGLDKPAVLVFPKLVVCLDCGFTQFALPETELRYLAQGIAA*
Ga0062593_1020051881	3300004114	Soil	VACRSCASENQTELGAEINIHFSRPKNLDIPAVLVFPTLLVCLDCGFTEFTLEETELRQVLKVRQGSV*
Ga0070710_109161321	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTCRSCGSQNQTEFGGEINVHFPGLKNLDKPAVFLFPKLLVCLDCGFTEFTITKTDLRLLDAGVAA*
Ga0070733_106790441	3300005541	Surface Soil	MPCRSCWSNLTAFTAEINIHFSGLRNLEKPGVLLFPKLLVCMNCGFAEFSIQEAELGLLGDSHLNFAESE*
Ga0070732_100456343	3300005542	Surface Soil	MACRSCGSENQTEFVSEILIHFSGLENLNKPGVLVFPKVLVCLDCGVSQFSLPEGELGLLRDNIAA*
Ga0070696_1016043441	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LQNQTEFGGEINVHSPGLKNLDKPAVFLFPKLLVCLDCGFTEFTITKTDLRLLGAGVAA*
Ga0070765_1014974321	3300006176	Soil	MACRSCESGNQTEFVAEMNVHLPGRKGLDKTAVLVFPRVVVCLDCGFSHFTLPETDLRALEKDAAA*
Ga0079219_119246282	3300006954	Agricultural Soil	SENQTEFVAEIDIHFAGRKGLDKPGVLFFPKLLVCLDCGLAQFTVPETELRLLKEGAT*
Ga0099829_100046149	3300009038	Vadose Zone Soil	MKCRSCGAEPQTEFGAEINIHFPGRRGLDKPAVLIFPKLVVCFECGFTEFTIPEDQLRLLEEDDAA*
Ga0116216_108502451	3300009698	Peatlands Soil	NQTEFGAEMLIHFSGLKNLDKPAVWVFPKLVVCLDCAFTEFTIPEAELRLLGEGAAA*
Ga0116223_102795232	3300009839	Peatlands Soil	MACRSCGSENQTQFVAEINIHFSGLRNLDKPGVLVFPKLLVCLDCGVSQFTVPKGELGLLRGNIAA*
Ga0074044_101322623	3300010343	Bog Forest Soil	MPCVSCGSENQTQFVAEINIHFSGLKNLSKPNVLVFPKVLVCLDCCVSQFTLPEGEVGLLRGDFAA*
Ga0074044_101740561	3300010343	Bog Forest Soil	CVSCGSENQTQFVAEINIHFSGLKNLNKPGVLVFPKVLVCLDCGVSQFTLPEGDVGLLREDIAA*
Ga0074044_107199462	3300010343	Bog Forest Soil	MACRSCGSENQRQFVAEINIHFSGLKNLNKPGVLVFPKLLVCLDCGLSQFTLPEGELGLLRENIAA*
Ga0126370_116951551	3300010358	Tropical Forest Soil	MACRRCASDKHKDFGAEINIHFPGRAGLDKPGVLVFPILVVCLECGLAEFSIPESELHQLVLGTEEEKKA*
Ga0126376_107002502	3300010359	Tropical Forest Soil	MVCKRCASDKHKEFGAEINIHFPGRAGLSKPGVLVFPMLVVCLACGLAEFSVPESELRQLVLGTEEEKKA*
Ga0126379_124909122	3300010366	Tropical Forest Soil	MACRRCASDNHKEFGAEINIHFRGRAALDKPGVLVFPMLVVCLECGLAEFSVPESELRQLVLGTEEEKKA*
Ga0136449_1040250632	3300010379	Peatlands Soil	EFGAEINIHFPGRESVDKPTVMVFPKLVVCLDCGFAHCMLPEPKLRLLAEGARSSV*
Ga0126383_115553431	3300010398	Tropical Forest Soil	MACRRCASDNHKEFGAEINIHFPGRAGLDKPGVLVFPMLVVCLECGLAEFTIPESELRQLVLGTEEEKKA*
Ga0150983_160080561	3300011120	Forest Soil	MSCVLCASGNQTEFLSEINMHFSGLKDLGRPSVLVFPKLVVCLDCGLTQFTLPETELRLLRESAAASEGCS*
Ga0137363_110816542	3300012202	Vadose Zone Soil	MACRSCQSKNRTELGAEINIHFPGREGLDKPAVLAYPVVVVCLDCGFTEFNLTETELLFTRDVAA*
Ga0137399_105988522	3300012203	Vadose Zone Soil	MACRSCRSENQTELGAEINIHFPGRRGLDKPAVMVFSNLAVCLDCGFTQFTLPETETRALETGAAA*
Ga0137372_100839843	3300012350	Vadose Zone Soil	MNCAFCAASNQMEFSAEINIHFSGFKNIDHPGVLVFPKLLVCLDCGFTQFTVAEGELGLLRGDAAA*
Ga0137413_117543692	3300012924	Vadose Zone Soil	MACRSCRSKNQTELGAEINIHFPGREGLDKPAVLAYPVVVVCLDCGFTEFNLAETELLFTRDVAA*
Ga0137419_106081401	3300012925	Vadose Zone Soil	MACRSCRSENQTELGAEINIHFPGRRGLDKPAVMVFSKLAVCLDCGFTQFTLPETETRALETGAAA*
Ga0137419_112891791	3300012925	Vadose Zone Soil	MACRSCRSENQSELVAEINIHFPGWRGLDKPAVMVYPKLVVCLDCGFTQFMLPETELRTLGKGVAA*
Ga0181538_100655611	3300014162	Bog	MACKLCRSENQTEFGAEINIHFSGQRNLDKPAVLVFPKLVVCLDCGFTQFTLPETELRLLGKGAAA*
Ga0181532_100018741	3300014164	Bog	VACRSCGSEHQTQFVAEINIHFSGLRNLDKPGVLVFPKLWVCFDCGFTQFTLPESELDLLTGNIAA*
Ga0181532_100256543	3300014164	Bog	MVCRSCGSENQTQFVAEINIHFPGLRNLDKPPVLVFPKLVVCLDCGVSRFTLPEGELGLLRGTIAA*
Ga0181526_102676102	3300014200	Bog	VACRSCGSEHQTQFVAEINIHFSGLRNLDKPGVLVFPKLWVCFDCGFTQFTLPESELGLLTGNIAA*
Ga0132257_1043798082	3300015373	Arabidopsis Rhizosphere	MTCRSCGSQNQTEFGGEINVHFPGLKNLDKPAVFLFPKLLVCLDCGFTEFTITKTDLRLLGAGVAA*
Ga0132255_1001536707	3300015374	Arabidopsis Rhizosphere	MACRSCWSQNQTEFGGEINVHFPGLKNLDKPAVFLFPKLLVCLDCGFTEFTITKTDLRLLGAGVAA*
Ga0181511_12239912	3300016702	Peatland	ERIETGTACRYCRSENRRQFSAEINIHFSGMENLNKPGVLVFPKIVVCLDCGDSQFTLTESAVDSLKA
Ga0181511_14309833	3300016702	Peatland	VACRSCGSEHQTQFVAEINIHFSGLRNLDKPGVLVFPKLWVCFDCGFTQFTLPESELDLLTGNIAA
Ga0181505_106496201	3300016750	Peatland	MVCRSCGSENQTQFVAEINIHFPGLRNLDKPPVLVFPKLVVCLDCGVSRFTLPEGELGLLRGTIAA
Ga0187802_101869561	3300017822	Freshwater Sediment	GSENQKEFGAEICVHFPGLKNLDKPAVMVFPRLLTCLDCGVTRFTIPEAELRCLAQDIAA
Ga0187818_100887703	3300017823	Freshwater Sediment	MTCRSCGSQSQTEFGAEICIHFPGLKNLDKPAVMVFPKLLVCLECGFAQFTVPEAELRCLAAQSIAA
Ga0187818_101220392	3300017823	Freshwater Sediment	MNCRSCGSADQTEFGAEINIHFPGLKNLDKPAVLVFPRLVVCLECGFTQFTVPETELCLLRENAAA
Ga0187818_102197072	3300017823	Freshwater Sediment	MACRSCGSKKQSELSAEINIHFSGRKNLDKSAVLVFSQLVVCLDCGFTQFTLPETELR
Ga0187818_102616201	3300017823	Freshwater Sediment	MNCRSCGSRNCREFGAEINIHFPGLEGLDKPAVLVFPKLVVCLDCGFTQFTLPETEVGYLAQGIAA
Ga0187818_104196541	3300017823	Freshwater Sediment	MACRSCGSENQSEFGAEINIHFSGRQNLGKSAVLVFPQLVVCLDCGFTQFTLPETELRHLAEGIAS
Ga0187818_104263891	3300017823	Freshwater Sediment	MACRSCGLANQTEFTAEIDIHFPGLRNLDKRPVLVFPKLLVCLDCGFTQFTIPETELRCLAQGIAA
Ga0187807_12116442	3300017926	Freshwater Sediment	TCRSCGSQSQTKFGAEICIHFPGLKNLDKPAVMVFPRLLTCLDCGVTRFTIPEAELRCLAQDIAA
Ga0187806_10794341	3300017928	Freshwater Sediment	MACKSCGSQDLTEFGAEICIHFPGMRNLDEATVMVFPKLLVCLDCGFTQFTLPETELRLLRESAAA
Ga0187806_12963272	3300017928	Freshwater Sediment	MACGSCGSQNQTEFGAEICIHFPGLKNLDKPAVMVFPRLLTCLDCGVTRFTIPEAELRCLAQDIAA
Ga0187814_103301301	3300017932	Freshwater Sediment	QELKRGLQCGALMACGSCGSVNLAEFGAEINIHFPGLEGLDKPAVLVFPRLAVCLDCGFTQFTLPETELRQLRAGSGDVVSLKS
Ga0187814_104051401	3300017932	Freshwater Sediment	MACRSCGSGNRTEFGAEICIHFPGLKNLEKPAVMVFPKLLVCLECGFTQFTLPETELLLLREGAAA
Ga0187801_100459203	3300017933	Freshwater Sediment	MACRSCGSGNQTEFGAEICIHFPGLKNLEKPAVMVFPKLLVCLECGFTQFTLPETELLLLREGAAA
Ga0187801_102398851	3300017933	Freshwater Sediment	MACRSCESKNQTQFDSEINIHFPGLKSLDKSAVLIFRKLVVCLNCGFTQLTIPETELRLLGEGGAGAASTAA
Ga0187801_103800962	3300017933	Freshwater Sediment	LAEKKAIMVCKSCGSGSLTELTAEIDIHFPGLKNLDKPTVLVFPKLLVCLKCGFTQFTIPEAELRHLAQGIAA
Ga0187803_102621912	3300017934	Freshwater Sediment	MACRSCGSENQTGFGAEINIHFSGRKNLDKSAMLVFSQLVVCLDCGFTQFTLPETELRYLAQGIAA
Ga0187821_101060672	3300017936	Freshwater Sediment	MACGSCGSENQVDFGAEINVHFPGRKNLDKPSVLVFPTLSVCLDCGLSHFNLQEAELLALRNGDAGSPTR
Ga0187809_103820131	3300017937	Freshwater Sediment	ENQVDFGAEINVHFPGRKNLDKPSVLVFPTLSVCLDCGLSHFNLQEAELLAPRNGDAGSPTR
Ga0187808_103442402	3300017942	Freshwater Sediment	MVCKSCGSGSLTEFTAEIDIHFPGLKNLDKPTVLVFPKLLVCLKCGFTQFTIPEAELRHLAQGIAA
Ga0187819_100718614	3300017943	Freshwater Sediment	MNCRSCGSGNRREFGTEINIHFPGLEGLDKPAVLVFPKVVVCLDCGFTQFTLPETELRQLRAGSGDVVSLKS
Ga0187819_101055634	3300017943	Freshwater Sediment	MWCSSCGSESLTEFTAEIDIHFPGLRNLDNLPVLVYPKLLVCLECGFTQFTIPEAELQCLAAQGIAA
Ga0187819_101154431	3300017943	Freshwater Sediment	MACRSCGSDRQTEFGAEINIHFPGRKGLDEPAVLIFPKLLVCLDCGFTQFTFPEAELRYLAQGIAA
Ga0187819_101481372	3300017943	Freshwater Sediment	MACRSCGSKKQSELSAEINIHFSGRKNLDKSAVLVFSQLVVCLDCGFTQFTLPETELRNLAQGIAS
Ga0187819_101929231	3300017943	Freshwater Sediment	MVCKSCGSGSLTDFTAEVDIHFPGLKNLDKPTVLVFPKLLVCLKCGFTQFTIPEAELRHLAQGIAA
Ga0187819_101962892	3300017943	Freshwater Sediment	MACKSCGSQDLTEFGAEICIHFPGMRNLDKATVMVFPKLLVCLDCGFTQFTLPETELRLLRESAAA
Ga0187819_105138991	3300017943	Freshwater Sediment	MACRSCTSENQNDFGAEMNVLFRGRNGLDKPAVLVFPRLTVCLDCGSTEFVIPEAQLHFLREDDAA
Ga0187819_107665391	3300017943	Freshwater Sediment	MACRSCGSENQSEFGAEINIHFSGRKNLGKSAVLVFPQLVVCLDCGFTQFTLPETELRHLAEGIAS
Ga0187817_100639883	3300017955	Freshwater Sediment	MACRSCGSGNQTEFGAEICIHFPGLKNLEKPAVMVFPKLLVCLECGFTQFTLPETEL
Ga0187817_100675913	3300017955	Freshwater Sediment	MNCRSCGSGNRREFGTEINIHFPGLEGLDKPAVLVFPRLAVCLDCGFTQFTLPETELRQLRAGSGDVVSLRS
Ga0187817_100713872	3300017955	Freshwater Sediment	MTCRSCGSQSQTEFGAEICIHFPGLKNLDKPAVMVFPKLLVCLECGFAQFTVPEAELRCLATQSIAA
Ga0187817_101408101	3300017955	Freshwater Sediment	MACGSCGSQNQTEFGAEICIHFPGLKNLDKPAVLVFPKLVVCLNCGFAQFTLPETELRLLRESAAA
Ga0187817_102191052	3300017955	Freshwater Sediment	MACRSCGSENEKEFGAEINIHFPGLKNVNKPTVMVFPKLMICWNCGFTQFTVPETELCLLRENAAA
Ga0187817_105581681	3300017955	Freshwater Sediment	MACRSCESKNQTQFDSEINIHFPGLKNLDKSAVLIFRKLVVCLDCGFTQFTIPETELRLL
Ga0187817_106067921	3300017955	Freshwater Sediment	MSCVSCGSSNQAEFSAEINIHFPGLKNLDKPSVLAFPKLLVCLDCGVAQFALPETELRLLRESAAA
Ga0187776_101263963	3300017966	Tropical Peatland	MACRSCGSANQTEFGAEINIHFSGWKNLDKPAVLVFPKLVVCLDCGLTQFTLPETELSLLREAAAA
Ga0187776_112550881	3300017966	Tropical Peatland	VEKSVIACRSCGSENQSEFYTEINIHFAGLTNLDKAPVMVFPKAVICLDCGVTQFTLPEAELRLLREGLKAA
Ga0187816_105541492	3300017995	Freshwater Sediment	SCGSESLTEFTAEIDIHFPGLRNLDNLPVLVYPKLLVCLECGFTQFTIPEAELQCLAAQGIAA
Ga0187815_100328132	3300018001	Freshwater Sediment	MACGSCGSQNQTEFGAEICIHFPGLKNLDKPAVLVFPKLVVCLDCGFAQFTLPETKLRLLREGIAA
Ga0187815_100664364	3300018001	Freshwater Sediment	MACRSCGSGNQKEFTAEIDIHFPGLRNLDKPTVLVFPKLLVCLDCGFTQFTLPETELRYLAQGIAA
Ga0187815_100758532	3300018001	Freshwater Sediment	MACRSCGSTNQTEFTAEIDIHLPGLKNLDKPTVLVFPRLVVCLDCGFTQFTLPETELRYLAQGIAA
Ga0187815_103697552	3300018001	Freshwater Sediment	MACKSCGSERLTEFTAEIDIHFPDLKNLCKPTVLVFPKLMVCLDCGFTQFALPEAELRLLRESAAA
Ga0187788_105092831	3300018032	Tropical Peatland	MACRSCGSDNQTKFTSEINIHFPGLKNLDRPTVWVFPKLVVCLDCGFTEFSILEPELLRLAEPGSTAA
Ga0193713_11945041	3300019882	Soil	LACKSCGAGNQSEHLAEINVHLSARNDLHKAAVLVFPKLLVCLDCGSTQFVLPEIELRLLRESIAA
Ga0210407_101162393	3300020579	Soil	MACRSCQAENVTEFGAEINIHFPAPEGLDEPPVFVFPKLVVCLGCGFTTFTLPETELHS
Ga0210403_102447111	3300020580	Soil	MACRSCQAENVTEFAAEVNIHFPAQEGLGKPSVLVFPKLVVCLGCGFTYFILAEPKLRQLEKRMQSGA
Ga0210399_109092902	3300020581	Soil	MVCRLCQVENVTEFGAEINIHFPGQEGLDQPPVLVFPKLVVCLACGFTNFTLPETELRQPAE
Ga0210395_100178837	3300020582	Soil	MTCRSCGSENQTQFVSEIMIHFAGLRNLDKPGALVFPKVLVCLDCGVSQFSLTQGELGLLMANIAA
Ga0210395_100923572	3300020582	Soil	SHVGHRTLESWVMSCVLCASGNQTEFLSEINMHFSGLKDLGRPSVLVFPKLVVCLDCGLTQFTLPETELRLLRESAAASEGCS
Ga0210401_100061113	3300020583	Soil	MSCVLCASGNQTEFLSEINMHFSGLKDLGRPSVLVFPKLVVCLDCGLTQFTLPETELRLLRESAAASEGCS
Ga0210401_100477594	3300020583	Soil	MPCRSCWSNLTAFTAEINIHFSGLRNLEKPGVLLFPKLLVCMNCGFAEFSIQEAELGLLGDSHLNFAESE
Ga0210401_109829142	3300020583	Soil	MVCRLCQAENVTEFGAEINIHFPAQEGLDESPLLVFPKLVVCLGCGFTNFTLEATELRQVAEVGAKRRSADSLRLEV
Ga0210400_104958582	3300021170	Soil	ELACKLCGSGNQSEFGAEINIHLSARKGLDRPAVLVFPKLVVCLDCGFAEFTLAETELRLLREGAAA
Ga0210397_116366901	3300021403	Soil	MTCKRCTSGNQREFSSEINVHFPGLKNLDKPSVLVFPKLLVCIDCGLTEFDIQETDLRLL
Ga0210387_116461342	3300021405	Soil	YLAVKGGENMACRSCQAENVTEFAAEVNIHFPAQEGLGKPSVLVFPKLVVCLGCGFTYFILAEPKLRQLEKRMQSGA
Ga0210394_103858182	3300021420	Soil	MACRSCQAENVTEFGAEINIHFPAGEGVDKPTVLVFSKLAVCLVCGFTQFTLPESKLRQLAKSVGSGA
Ga0210394_105378332	3300021420	Soil	MACRSCQAENVTEFGAEINIHFSAQEGLDKPTVLVFPKLVVCLSCGFTHFMLPEPKLRELAKRMRSGA
Ga0210402_100812735	3300021478	Soil	MACKSCASDHQADFGAEINIHFPGLRGMDKPAIWAFPKLTVCLDCGYTEFTLPETELWCLAKGAAP
Ga0210402_103376062	3300021478	Soil	MACKSCQAENVTEFGAEINIHFPAPEGLDEPPVFVFPKLAVCLGCGFTNFTLPKTELRQLAKCVRSGA
Ga0210402_117440041	3300021478	Soil	MFAEERTKASMACRSCRSKRQTEFGADINIHLSASKGMDEPAVLVFPRFVVCLDCGLAEFTLDETELRLLLEGAA
Ga0210409_103409992	3300021559	Soil	MTCRSCDSEEQTQFDAEIMIHFSGLRNLDKPGVLVFPKLVICLNCGVSQFILPEGELSLLRRNIAA
Ga0242642_10635532	3300022504	Soil	CRSCGSENQTQFVSEIMIHFAGLRNLDKPGALVFPKVLVCLDCGVSQFSLTQGELGLLMANIAA
Ga0207692_101800541	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TCRSCGSQNQTEFGGEINVHFPGLKNLDKHAVFLFPKLLVCLDCGFTEFTITKTDLRLLDAGVAA
Ga0209446_10956691	3300027698	Bog Forest Soil	MACNSCGSENRTEFGAEINIHFPGWKGLDKPSVLIFPKLVVCLECGFAQFTLPEAELRLLQEGAAA
Ga0209448_1000007028	3300027783	Bog Forest Soil	MVGSGISQAVTTCRSCGSEDQTQFNSEIMIHFSGLKHLSNPGVLVFPRLLVCLDCGVSQFALPERELGQLKETIAA
Ga0209448_100147093	3300027783	Bog Forest Soil	MACRSCGSANRTEFGAEINIHFPGWKGLDKPAVLVFPKLVVCLDCGFTQFALPETELRYLAQGIAA
Ga0209448_100988132	3300027783	Bog Forest Soil	MACRSCGSENQTEFGAEINIHFPGLKNLDKPAVLVFPKLVVCLDCGFTQFALPEAELRYLAQGIAA
Ga0209448_102764582	3300027783	Bog Forest Soil	MACRSCGSENQTEFGTEINIHFPGRKGLDKPAVLVFPKLVVCLNCGFTQFALPEAQLLLLREGLAA
Ga0209180_100127732	3300027846	Vadose Zone Soil	MKCRSCGAEPQTEFGAEINIHFPGRRGLDKPAVLIFPKLVVCFECGFTEFTIPEDQLRLLEEDDAA
Ga0265353_10211602	3300028015	Soil	MACSSCRSNNATEFGAEINIHFPGRESVDKPTVMVFPKLVVCLDCGFAHCMLPEPKLRLLAEGARSSV
Ga0316363_103452271	3300030659	Peatlands Soil	MACRSCGSENQTQFVAEINIHFSGLRNLDKPGVLVFPKLLVCLDCGVSQFTVPKGELGLLRGNIAA
Ga0075373_112974012	3300030945	Soil	RSCQVENVTEFGAEINIHFPAPEGLDEPAVFVFPKLVVCFGCGFTNFTLPETELRQLAE
Ga0265754_10083842	3300031040	Soil	MACSSCRSNHATEFGAEINIHLPGRESVDKPTVMVFPKLVVCLDCGFAHCMLPEPKLRLLAEGARSSV
Ga0170834_1024309872	3300031057	Forest Soil	MACRSCQAENVTEFAAEVNIHFPAQEGLGKPRVLVFPKLVVCLGCGFTYFILAEPKLRQLEKRMQSGA
Ga0170834_1053387601	3300031057	Forest Soil	MACRSCQVENVTEFGAEINIHFPAPEGLDEPAVFVFPKLVVCFGCGFTNFTLPETELRQLAE
Ga0170823_123432132	3300031128	Forest Soil	MVCRSCQAENVTEFGAEINIHFSGPEGLYEPPVLVFPKLVVCLGCGFTNFTLPETELRQLAE
Ga0170823_132448342	3300031128	Forest Soil	MVCRSCQVENVKEFGAEINIHFPAPEGLDEPAVFVFPKLVVCFGCGFTNFTLPEIELRQLAE
Ga0170824_1105033632	3300031231	Forest Soil	ENVKEFGAEINIHFPAPEGLDEPAVFVFPKLVVCFGCGFTNFTLPETELRQLAE
Ga0170824_1159704561	3300031231	Forest Soil	MACRSCQVENVTEFGAEINIHFPAPEGLDEPPVFVFPQLAVCLGCGFTTFTLPETELRQLAECVPSGA
Ga0170824_1216402523	3300031231	Forest Soil	MVCRSCQVENVTEFGAEINIHFSGPEGLYEPPVLVFPKLVVCLGCGFTNFTLPETELRQLAE
Ga0170820_170597953	3300031446	Forest Soil	MACRSCQAENVTQFGAEINIHFPAPKGLDEPPVFVFPQLAVCLGCGFTTFTLPETELRQLAECVRSGA
Ga0170818_1003925523	3300031474	Forest Soil	MACRSCQSENVTQFGAEINIHFPAPEGLDEPPVFVFPQLAVCLGCGFTTFALPETELRQLAECVRSSA
Ga0170818_1062787972	3300031474	Forest Soil	TEFGAEINIHFPGRKGLDKPAVLVFPKLVVCLDCGFTQFTLPEAELCLLGQGAADLVFKGVG
Ga0307474_106224933	3300031718	Hardwood Forest Soil	MVCKSCQVENVKEFGAEINIHFPAPEGLDEPAVFVFPKLVVCFGCGFTNFTLPETDLRQSAK
Ga0306921_124872732	3300031912	Soil	MACKLCRSENQGEFVAEINVHFPGLKNLDKPSVLVFPKIAVCLDCGFTEFLIPKTELLQLADNVPLSRK
Ga0307479_110413142	3300031962	Hardwood Forest Soil	MVCRSCQAENVTEFGAEINIHFPAQEGLDKPSVLVFPKLVVCLGCGFTNFTLPEPKLRQLAECVQSGA
Ga0307479_115028372	3300031962	Hardwood Forest Soil	VVCKSCQVENVKEFGSEINIHFPAPEGLDEPAVFVFPKLVVCFGCGFTNFTLSETDLRQLAE
Ga0307471_1004395331	3300032180	Hardwood Forest Soil	MVCRSCQAENVTEFGAEINIHFPAREGLDKLSVLVFPKVVVCLGCGFTNFMLPEPKLRQLAECVQSGA
Ga0335069_102304931	3300032893	Soil	RGKEAVMACRSCGSENQTEFGAEINIHFPGLRNLDKSAVMVFPKLVVCLDCGFTQFTIPEAELRRLAQGNAT
Ga0335069_108729181	3300032893	Soil	MCCLSCASGNQAEFGAEINIHFPGLRNIDRPSVWAFPKLSVCLDCGFARFTLPETELRLLREPTTDER
Ga0326723_0604827_317_496	3300034090	Peat Soil	LENQTELGAEINIHFPGRKGLDKPAVLVFPKLVVCLDCGFAQFTLPEAELLLLGERVAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences