Metagenome / Metatranscriptome Family F062913

Basic Information
Family ID	F062913
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	52 residues
Representative Sequence	MERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL
Number of Associated Samples	31
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	86.15 %
% of genes from short scaffolds (< 2000 bps)	90.77 %
Associated GOLD sequencing projects	17
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.231 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring (60.769 % of family members)
Environment Ontology (ENVO)	Unclassified (88.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (60.769 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.55% β-sheet: 0.00% Coil/Unstructured: 27.45%
Feature Viewer

Powered by Feature Viewer

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.23 %
All Organisms	root	All Organisms	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.23 %
Viruses	superkingdom	All Organisms → Viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000348\|GreS_7680CDRAFT_1003571	Not Available	1825	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1003688	Not Available	1781	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1003831	Not Available	1733	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1004123	Not Available	1642	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1005011	Not Available	1421	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1005019	Not Available	1420	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1005665	Not Available	1297	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1006984	Not Available	1102	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1008960	Not Available	900	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1009603	Not Available	850	Open in IMG/M
3300000348\|GreS_7680CDRAFT_1010342	Not Available	805	Open in IMG/M
3300001340\|JGI20133J14441_1019052	Not Available	1990	Open in IMG/M
3300001340\|JGI20133J14441_1021266	Not Available	1827	Open in IMG/M
3300001340\|JGI20133J14441_1021800	Not Available	1790	Open in IMG/M
3300001340\|JGI20133J14441_1022918	Not Available	1710	Open in IMG/M
3300001340\|JGI20133J14441_1025667	Not Available	1554	Open in IMG/M
3300001684\|JGI20128J18817_1006442	Not Available	2543	Open in IMG/M
3300001684\|JGI20128J18817_1009534	Not Available	1956	Open in IMG/M
3300001684\|JGI20128J18817_1010149	Not Available	1877	Open in IMG/M
3300001684\|JGI20128J18817_1010643	Not Available	1815	Open in IMG/M
3300001684\|JGI20128J18817_1010894	Not Available	1787	Open in IMG/M
3300001684\|JGI20128J18817_1026884	Not Available	919	Open in IMG/M
3300001684\|JGI20128J18817_1029231	Not Available	862	Open in IMG/M
3300005223\|Ga0073350_101674	Not Available	1539	Open in IMG/M
3300005223\|Ga0073350_113696	Not Available	916	Open in IMG/M
3300005223\|Ga0073350_120737	Not Available	3199	Open in IMG/M
3300005223\|Ga0073350_141634	Not Available	1211	Open in IMG/M
3300005859\|Ga0080003_1010653	Not Available	2215	Open in IMG/M
3300005859\|Ga0080003_1010709	Not Available	2205	Open in IMG/M
3300005859\|Ga0080003_1011581	Not Available	2044	Open in IMG/M
3300005859\|Ga0080003_1012017	Not Available	1976	Open in IMG/M
3300005859\|Ga0080003_1012728	Not Available	1868	Open in IMG/M
3300005859\|Ga0080003_1019582	Not Available	1227	Open in IMG/M
3300005859\|Ga0080003_1021481	Not Available	1122	Open in IMG/M
3300005859\|Ga0080003_1023579	Not Available	1015	Open in IMG/M
3300005861\|Ga0080006_1091119	Not Available	1925	Open in IMG/M
3300005861\|Ga0080006_1102734	Not Available	1978	Open in IMG/M
3300005861\|Ga0080006_1150061	Not Available	1023	Open in IMG/M
3300005977\|Ga0081474_139731	Not Available	1644	Open in IMG/M
3300006179\|Ga0079043_1004082	Not Available	1902	Open in IMG/M
3300006179\|Ga0079043_1004146	Not Available	1880	Open in IMG/M
3300006179\|Ga0079043_1004509	Not Available	1762	Open in IMG/M
3300006181\|Ga0079042_1006669	Not Available	1657	Open in IMG/M
3300006855\|Ga0079044_1005524	Not Available	1853	Open in IMG/M
3300006855\|Ga0079044_1005712	Not Available	1812	Open in IMG/M
3300006857\|Ga0079041_1006557	Not Available	1780	Open in IMG/M
3300006858\|Ga0079048_1028856	Not Available	712	Open in IMG/M
3300006859\|Ga0079046_1007703	Not Available	1948	Open in IMG/M
3300006859\|Ga0079046_1007836	Not Available	1926	Open in IMG/M
3300006859\|Ga0079046_1008266	Not Available	1857	Open in IMG/M
3300006859\|Ga0079046_1015118	Not Available	1233	Open in IMG/M
3300007811\|Ga0105111_1002169	Not Available	2072	Open in IMG/M
3300007811\|Ga0105111_1002417	Not Available	1937	Open in IMG/M
3300007811\|Ga0105111_1002621	Not Available	1851	Open in IMG/M
3300007811\|Ga0105111_1004151	Not Available	1400	Open in IMG/M
3300007811\|Ga0105111_1004644	Not Available	1293	Open in IMG/M
3300007811\|Ga0105111_1004847	Not Available	1260	Open in IMG/M
3300007811\|Ga0105111_1005568	Not Available	1158	Open in IMG/M
3300007811\|Ga0105111_1006251	Not Available	1074	Open in IMG/M
3300007812\|Ga0105109_1002785	Not Available	2031	Open in IMG/M
3300007812\|Ga0105109_1002999	Not Available	1928	Open in IMG/M
3300007812\|Ga0105109_1003046	Not Available	1908	Open in IMG/M
3300007812\|Ga0105109_1003047	Not Available	1908	Open in IMG/M
3300007812\|Ga0105109_1003104	Not Available	1881	Open in IMG/M
3300007812\|Ga0105109_1003184	Not Available	1844	Open in IMG/M
3300007812\|Ga0105109_1003227	Not Available	1826	Open in IMG/M
3300007812\|Ga0105109_1003245	Not Available	1819	Open in IMG/M
3300007812\|Ga0105109_1003627	Not Available	1664	Open in IMG/M
3300007812\|Ga0105109_1005403	Not Available	1244	Open in IMG/M
3300007812\|Ga0105109_1006072	Not Available	1145	Open in IMG/M
3300007812\|Ga0105109_1006309	Not Available	1115	Open in IMG/M
3300007814\|Ga0105117_1005192	Not Available	1930	Open in IMG/M
3300007814\|Ga0105117_1012002	Not Available	1136	Open in IMG/M
3300007814\|Ga0105117_1037417	Not Available	547	Open in IMG/M
3300007816\|Ga0105112_1001075	Not Available	1826	Open in IMG/M
3300007816\|Ga0105112_1001076	Not Available	1826	Open in IMG/M
3300007816\|Ga0105112_1001464	Not Available	1593	Open in IMG/M
3300007816\|Ga0105112_1003652	Not Available	1063	Open in IMG/M
3300007816\|Ga0105112_1008952	Not Available	685	Open in IMG/M
3300013008\|Ga0167616_1008482	Not Available	1886	Open in IMG/M
3300013008\|Ga0167616_1009305	Not Available	1767	Open in IMG/M
3300013008\|Ga0167616_1015966	Not Available	1204	Open in IMG/M
3300013009\|Ga0167615_1012241	Not Available	1526	Open in IMG/M
3300013009\|Ga0167615_1020795	Not Available	1110	Open in IMG/M
3300013009\|Ga0167615_1053896	Not Available	625	Open in IMG/M
3300025462\|Ga0209120_1011587	Not Available	1929	Open in IMG/M
3300025462\|Ga0209120_1012629	Not Available	1812	Open in IMG/M
3300025462\|Ga0209120_1012665	Not Available	1808	Open in IMG/M
3300025462\|Ga0209120_1013190	Not Available	1755	Open in IMG/M
3300025462\|Ga0209120_1013415	Not Available	1733	Open in IMG/M
3300025462\|Ga0209120_1030360	Not Available	965	Open in IMG/M
3300025462\|Ga0209120_1034421	Not Available	882	Open in IMG/M
3300025462\|Ga0209120_1034452	Not Available	882	Open in IMG/M
3300025503\|Ga0209012_1013741	Not Available	3389	Open in IMG/M
3300025503\|Ga0209012_1027607	Not Available	1816	Open in IMG/M
3300025503\|Ga0209012_1032376	Not Available	1573	Open in IMG/M
3300025503\|Ga0209012_1046248	Not Available	1145	Open in IMG/M
3300026623\|Ga0208661_103981	Not Available	1737	Open in IMG/M
3300026623\|Ga0208661_104550	Not Available	1550	Open in IMG/M
3300026627\|Ga0208548_104895	Not Available	2249	Open in IMG/M
3300026627\|Ga0208548_105852	Not Available	1900	Open in IMG/M
3300026762\|Ga0208559_102331	Not Available	2311	Open in IMG/M
3300026762\|Ga0208559_102784	Not Available	1979	Open in IMG/M
3300026762\|Ga0208559_103014	Not Available	1845	Open in IMG/M
3300026762\|Ga0208559_104656	Not Available	1288	Open in IMG/M
3300026762\|Ga0208559_105152	Not Available	1187	Open in IMG/M
3300026768\|Ga0208447_102633	Not Available	1862	Open in IMG/M
3300026768\|Ga0208447_102671	Not Available	1846	Open in IMG/M
3300026768\|Ga0208447_102925	Not Available	1740	Open in IMG/M
3300026768\|Ga0208447_102981	All Organisms → Viruses → Predicted Viral	1714	Open in IMG/M
3300026768\|Ga0208447_104180	Not Available	1348	Open in IMG/M
3300026768\|Ga0208447_104348	Not Available	1312	Open in IMG/M
3300026768\|Ga0208447_105934	Not Available	1046	Open in IMG/M
3300026877\|Ga0208314_105382	Not Available	2508	Open in IMG/M
3300026877\|Ga0208314_120593	Not Available	822	Open in IMG/M
3300026882\|Ga0208313_118667	Not Available	770	Open in IMG/M
3300026906\|Ga0208683_108792	Not Available	1818	Open in IMG/M
3300026906\|Ga0208683_109494	Not Available	1701	Open in IMG/M
3300026906\|Ga0208683_121100	Not Available	829	Open in IMG/M
3300027931\|Ga0208312_101987	Not Available	1878	Open in IMG/M
3300027931\|Ga0208312_102096	Not Available	1803	Open in IMG/M
3300027931\|Ga0208312_105323	Not Available	984	Open in IMG/M
3300027933\|Ga0208549_104748	Not Available	3034	Open in IMG/M
3300027933\|Ga0208549_108094	Not Available	1932	Open in IMG/M
3300027933\|Ga0208549_108120	Not Available	1927	Open in IMG/M
3300027933\|Ga0208549_108359	Not Available	1879	Open in IMG/M
3300027933\|Ga0208549_108747	Not Available	1809	Open in IMG/M
3300027933\|Ga0208549_127050	Not Available	683	Open in IMG/M
3300027937\|Ga0208151_106485	Not Available	1954	Open in IMG/M
3300027937\|Ga0208151_106725	Not Available	1887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Thermal Springs	Environmental → Aquatic → Thermal Springs	73.08%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	18.46%
Freshwater	Environmental → Aquatic → Freshwater	8.46%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	73.08%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	17.69%
Lotic	Environmental → Aquatic → Freshwater → Lotic	8.46%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	60.77%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats	17.69%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	12.31%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	8.46%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	60.77%
Hot Spring	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Hot Spring	17.69%
Hypersaline Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hypersaline Mat	9.23%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	8.46%
Hotspring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hotspring	3.08%
Ferrous Microbial Mat	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Ferrous Microbial Mat	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000348	Acidic sulfate chloride spring microbial streamer communities from Grendel Spring, Yellowstone National Park, USA - T=76-80	Environmental	Open in IMG/M
3300001340	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B	Environmental	Open in IMG/M
3300001684	Hot spring microbial communities from Joseph's Coat, Yellowstone National Park, USA - JC2_E	Environmental	Open in IMG/M
3300005223	Sylvan Springs Unknown 12.1A - Microbial communities from the Yellowstone National Park, bulk metagenomes as controls for mini-metagenomic methods	Environmental	Open in IMG/M
3300005859	Hot spring microbial communities from Joseph's Coat, Yellowstone National Park, USA - JC2_E (SPADES assembly)	Environmental	Open in IMG/M
3300005861	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPADES assembly)	Environmental	Open in IMG/M
3300005977	Ferrous microbial mat communities from One Hundred Spring Plain, Yellowstone National Park, USA	Environmental	Open in IMG/M
3300006179	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_C virus_MetaG	Environmental	Open in IMG/M
3300006181	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_B nyco_MetaG	Environmental	Open in IMG/M
3300006855	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_C host_MetaG	Environmental	Open in IMG/M
3300006857	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_B host_MetaG	Environmental	Open in IMG/M
3300006858	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - OSPB_host_MetaG	Environmental	Open in IMG/M
3300006859	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_host_MetaG	Environmental	Open in IMG/M
3300007811	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Slide_host_7_15	Environmental	Open in IMG/M
3300007812	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_6_15	Environmental	Open in IMG/M
3300007814	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Slides-mat_host_7_15	Environmental	Open in IMG/M
3300007816	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_virus_9_15	Environmental	Open in IMG/M
3300013008	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Mat_host_9_15 (v2)	Environmental	Open in IMG/M
3300013009	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_9_15 (v2)	Environmental	Open in IMG/M
3300025462	Hot spring microbial communities from Joseph's Coat, Yellowstone National Park, USA - JC2_E (SPAdes)	Environmental	Open in IMG/M
3300025503	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPAdes)	Environmental	Open in IMG/M
3300026623	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_C virus_MetaG (SPAdes)	Environmental	Open in IMG/M
3300026627	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_C host_MetaG (SPAdes)	Environmental	Open in IMG/M
3300026762	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_6_15 (SPAdes)	Environmental	Open in IMG/M
3300026768	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Slide_host_7_15 (SPAdes)	Environmental	Open in IMG/M
3300026877	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Mat_host_9_15 (SPAdes)	Environmental	Open in IMG/M
3300026882	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Slides-mat_host_7_15 (SPAdes)	Environmental	Open in IMG/M
3300026906	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_9_15 (SPAdes)	Environmental	Open in IMG/M
3300027931	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_virus_9_15 (SPAdes)	Environmental	Open in IMG/M
3300027933	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_host_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027937	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_B host_MetaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GreS_7680CDRAFT_10035711	3300000348	Freshwater	LPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRMFL*
GreS_7680CDRAFT_10036881	3300000348	Freshwater	CEGNTQIIPIINRVLELIRGGECDKAYNELNKLRMFL*
GreS_7680CDRAFT_10038311	3300000348	Freshwater	INCEGNTQIISVINRALELIRGGECDKAYNELNKLRMFL*
GreS_7680CDRAFT_10041233	3300000348	Freshwater	NTQILSIINRALELIRGGECDKAYNELNKLRIFL*
GreS_7680CDRAFT_10050113	3300000348	Freshwater	MERSRAVEVFSNINCEGNTQIISVINRALELIRSGECDKAYNELNKLRMFL*
GreS_7680CDRAFT_10050191	3300000348	Freshwater	INCEGNTQILSIINRALELIRGGECDKAYNELNKLRVFL*
GreS_7680CDRAFT_10056653	3300000348	Freshwater	LSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL*
GreS_7680CDRAFT_10069843	3300000348	Freshwater	AVEVFSNINCEGNTQIISVINRALELIRGGECDRAYNELNKLRMFL*
GreS_7680CDRAFT_10089601	3300000348	Freshwater	AVFRLLPCLFMDRSRAVEVFSNINCEGNTQIISIINRVLELIRGGECDKAYNELNKLKMFL*
GreS_7680CDRAFT_10096032	3300000348	Freshwater	LFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLKMFL*
GreS_7680CDRAFT_10103422	3300000348	Freshwater	EGNTQILSIINRALELIRGGECDKAYNELNKLKMFL*
JGI20133J14441_10190524	3300001340	Hypersaline Mat	INCEGNTQILSTINRALELIRGGECDKAYNELNKLRMFL*
JGI20133J14441_10212661	3300001340	Hypersaline Mat	SRAVEVFNNINCEGNTQIISIINRALELIREGECDKAYNELNKLKMFL*
JGI20133J14441_10218001	3300001340	Hypersaline Mat	NINCESNTQIVSTISRALELIRGGECDKAYNELNKLKMFL*
JGI20133J14441_10229183	3300001340	Hypersaline Mat	NINCESNTQIVSTISRALELIRGGECDKAYNELRKLSMIL*
JGI20133J14441_10256673	3300001340	Hypersaline Mat	INCEGNTQILSTINRALELIRGGECDKAYNELNKLKMVL*
JGI20128J18817_10064421	3300001684	Hot Spring	LINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIVSIINRALELIRGGECDKAYNELNKLGMFL*
JGI20128J18817_10095341	3300001684	Hot Spring	AVFRLLPCLFMERSRAVEVFNNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL*
JGI20128J18817_10101491	3300001684	Hot Spring	MERSKAVEVFNNINCEGNTQILSTINRTLELIRGGECDKAYNELNKLRMFL*
JGI20128J18817_10106433	3300001684	Hot Spring	FMERSRAVEVFSNINCEGNTQIVSIINRALELIRGGECDKAYNELNKLKMFL*
JGI20128J18817_10108943	3300001684	Hot Spring	INCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL*
JGI20128J18817_10268842	3300001684	Hot Spring	LLPCLFMERSRAVEVFNNINCEGNTQILSTINRTLELIRRGECDKAYNELNKLKMFL*
JGI20128J18817_10292311	3300001684	Hot Spring	CLFMERSRAVEVFSNINCEGNTQIVSIINRALELIRGGECDKAYNELRRLSMFL*
Ga0073350_1016741	3300005223	Hotspring	NLSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL*
Ga0073350_1136962	3300005223	Hotspring	MERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDRAYNELRKLSMFL*
Ga0073350_1207371	3300005223	Hotspring	NLSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLRLFL*
Ga0073350_1416343	3300005223	Hotspring	MERSRAVEVFNNINCEGNTQILSTINRALELIRGGECDKAYNELNKLKMFL*
Ga0080003_10106534	3300005859	Hot Spring	RLLPCLFMERSKAVEVFNNINCEGNTQIVSTINRALELIRGGECDKAYNELNKLGMFL*
Ga0080003_10107091	3300005859	Hot Spring	RLLPCLFMERSKAVEVFNNINCEGNTQIVSTINRALELIRSGECDKAYNELNKLKMFL*
Ga0080003_10115811	3300005859	Hot Spring	CEGNTQIVSTINRALELIRGGECDKAYNELNKLRMFL*
Ga0080003_10120171	3300005859	Hot Spring	RSRAVEVFNNINCEGNTQILSTINRALELIRGGECDKAYNELNKLKMFL*
Ga0080003_10127281	3300005859	Hot Spring	RLLPCLFMERSRAVEVFNNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL*
Ga0080003_10195821	3300005859	Hot Spring	RLLPCLFMERSRAIEVFNNINCEGNTQIVSTINRALELIREAEYNKAYNELNKLKMFL*
Ga0080003_10214811	3300005859	Hot Spring	LLPCLFMERSRAVEVFSNINCEGNTQIVSIINRALELIRGGECDKAYNELNKLKMFL*
Ga0080003_10235792	3300005859	Hot Spring	MERSRAVEVFSNINCEGNTQIVSTINRVLELIRGGECDKAYNELRKLSMFL*
Ga0080006_10911191	3300005861	Hypersaline Mat	MERSRAVEVFNNINCEGNTQIISIINRALELIRGGECDKAYNELKKLSMIL*
Ga0080006_11027344	3300005861	Hypersaline Mat	MERSRAVEVFNNINCESNTQIVSTISRALELIRGGECDKAYNELRKLSMIL*
Ga0080006_11500612	3300005861	Hypersaline Mat	LLPCLFMERSRAVEVFNNINCEGNTQILSTINRALELIRGGECDKAYNELNKLKLFL*
Ga0081474_1397313	3300005977	Ferrous Microbial Mat	EVFSNINCEGNTQIIPIINRALDLIRGGECDKAYNELNKLRVFL*
Ga0079043_10040823	3300006179	Hot Spring	LLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELKKLSMFL*
Ga0079043_10041463	3300006179	Hot Spring	LNAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSIINRVLELIRGGECDKAYNELNKLKMFL*
Ga0079043_10045093	3300006179	Hot Spring	NINCEGNTQILSTINRALELIRGGECDKAYNELRKLSMFL*
Ga0079042_10066693	3300006181	Hot Spring	LSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELKKLSMFL*
Ga0079044_10055243	3300006855	Hot Spring	LNAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL*
Ga0079044_10057123	3300006855	Hot Spring	LLPCLFMERSRAVEVFSNINCEGNTQILSTINRALELIRGGECDKAYNELRKLSMFL*
Ga0079041_10065573	3300006857	Hot Spring	AVEVFSNINCEGNTQILSTINRALELIRGGECDKAYNELRKLSMFL*
Ga0079048_10288562	3300006858	Hot Spring	LINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL*
Ga0079046_10077031	3300006859	Hot Spring	MERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRTFL*
Ga0079046_10078361	3300006859	Hot Spring	NCEGNTQIISVINRALELIRDGECDKAYNELRKLSMFL*
Ga0079046_10082661	3300006859	Hot Spring	VFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL
Ga0079046_10151183	3300006859	Hot Spring	LSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIVSIINRALELIRGGECDKAYNELNKLKMFL*
Ga0105111_10021694	3300007811	Hot Spring	AVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELNKLRMFL*
Ga0105111_10024171	3300007811	Hot Spring	FLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRVFL*
Ga0105111_10026211	3300007811	Hot Spring	AVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL*
Ga0105111_10041513	3300007811	Hot Spring	VEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELRKLSMFL*
Ga0105111_10046441	3300007811	Hot Spring	CLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRMLL*
Ga0105111_10048471	3300007811	Hot Spring	INCEGNTQIISVINRALELIRGGECDKAYNELNKLSMFL*
Ga0105111_10055683	3300007811	Hot Spring	EVFSNINCEGNTQIIPIINRALELIRGGECDKAYNELNKLRMFL*
Ga0105111_10062513	3300007811	Hot Spring	FMERSRAVEVFSNINCEGNTQIIPIINRALELIRGGECDKAYNELNKLKMFL*
Ga0105109_10027854	3300007812	Hot Spring	RAVEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELNKLRMFL*
Ga0105109_10029991	3300007812	Hot Spring	FLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSIINRVLEFIRGGECDKAYNELNKLKMFL*
Ga0105109_10030461	3300007812	Hot Spring	RAVEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELRKLSMFL*
Ga0105109_10030473	3300007812	Hot Spring	VEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLKMFL*
Ga0105109_10031041	3300007812	Hot Spring	MERSRAVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRVFL*
Ga0105109_10031843	3300007812	Hot Spring	MERSRAVEVFSNINCEGNTQIIPVINRALELIRGSECDKAYNELNKLKMFL*
Ga0105109_10032273	3300007812	Hot Spring	MERSRAVEVFSNINCEGNTQILSIINRVLELIRGGECDKAYNELNKLRMFL*
Ga0105109_10032451	3300007812	Hot Spring	MERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELKRLSMFL*
Ga0105109_10036273	3300007812	Hot Spring	CEGNTQIISVINRALELIRGGECDKAYNELNKLRMLL*
Ga0105109_10054033	3300007812	Hot Spring	VEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLSMFL*
Ga0105109_10060721	3300007812	Hot Spring	RLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL*
Ga0105109_10063093	3300007812	Hot Spring	MERSRAVEVFSNINCEGNTQILSIINRALELIRSGECDKAYNELNKLRMFL*
Ga0105117_10051923	3300007814	Hot Spring	MERCRADEVISNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL*
Ga0105117_10120023	3300007814	Hot Spring	NAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL*
Ga0105117_10374172	3300007814	Hot Spring	FMERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL*
Ga0105112_10010753	3300007816	Hot Spring	MERSRAVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRMFL*
Ga0105112_10010763	3300007816	Hot Spring	FMERSRAVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRVFL*
Ga0105112_10014641	3300007816	Hot Spring	SRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELRKLSMFL*
Ga0105112_10036523	3300007816	Hot Spring	ERSRAVEVFSNINCEGNTQIISVINRTLELIRGGECDKAYNELNKLRIFL*
Ga0105112_10089522	3300007816	Hot Spring	FMERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRVFL*
Ga0167616_10084821	3300013008	Hot Spring	MERSRAVEVFSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL*
Ga0167616_10093053	3300013008	Hot Spring	SRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRMLL*
Ga0167616_10159661	3300013008	Hot Spring	NTQIISVINRALELIRGGECDKAYNELNKLSMFL*
Ga0167615_10122413	3300013009	Hot Spring	FMERSRAVEVFSNINCEGNTQILSIINRVLEFIRGGECDKAYNELNKLKMFL*
Ga0167615_10207951	3300013009	Hot Spring	AVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL*
Ga0167615_10538961	3300013009	Hot Spring	RSRAVEVFSNINCEGNTQIIPIINRALDLIRGGECDKAYNELNKLRVFL*
Ga0209120_10115871	3300025462	Hot Spring	ERSKAVEVFNNINCEGNTQILSTINRTLELIRGGECDKAYNELNKLRMFL
Ga0209120_10126291	3300025462	Hot Spring	MERSKAVEVFNNINCEGNTQIVSTINRALELIRSGECDKAYNELNKLKMFL
Ga0209120_10126653	3300025462	Hot Spring	AVEVFNNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL
Ga0209120_10131903	3300025462	Hot Spring	ERSRAVEVFSNINCEGNTQIVSIINRALELIRGGECDKAYNELRRLSMFL
Ga0209120_10134151	3300025462	Hot Spring	MERSKAVEVFNNINCEGNTQIVSTINRALELIRGGECDKAYNELNKLRMFL
Ga0209120_10303602	3300025462	Hot Spring	SRAVEVFNNINCEGNTQIISIINSVLELIREGECDKAYNELNKLRMFL
Ga0209120_10344212	3300025462	Hot Spring	MERSRAVEVFNNINCEGNTQILSTINRALELIRGGECDKAYNELKKLSMIL
Ga0209120_10344522	3300025462	Hot Spring	VFRLLPCLFMERSRAVEVFSNINCEGNTQIVSTINRVLELIRGGECDKAYNELRKLSMFL
Ga0209012_10137411	3300025503	Hypersaline Mat	LFMERGRAVEVFNSINCEGNTQIVSIINRALELIRGGECDKAYNELRKLSMVL
Ga0209012_10276073	3300025503	Hypersaline Mat	RAVEVFNNINCESNTQIVSTISRALELIRGGECDKAYNELNKLKMFL
Ga0209012_10323763	3300025503	Hypersaline Mat	RSRAVEVFNNINCEGNTQILSTINRALELIRGGECDKAYNELNKLKMVL
Ga0209012_10462483	3300025503	Hypersaline Mat	FNNINCEGNTQIISIINRALELIRGGECDKAYNELKKLSMIL
Ga0208661_1039813	3300026623	Hot Spring	INCEGNTQILSTINRALELIRGGECDKAYNELRKLSMFL
Ga0208661_1045501	3300026623	Hot Spring	LPCLFMERSRAVEVFSNINCEGNTQILSIINRVLELIRGGECDKAYNELNKLKMFL
Ga0208548_1048954	3300026627	Hot Spring	MERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL
Ga0208548_1058523	3300026627	Hot Spring	NAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSTINRALELIRGGECDKAYNELKKLSMFL
Ga0208559_1023311	3300026762	Hot Spring	NAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELNKLRMFL
Ga0208559_1027841	3300026762	Hot Spring	NAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELRKLSMFL
Ga0208559_1030143	3300026762	Hot Spring	MERSRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELKRLSMFL
Ga0208559_1046561	3300026762	Hot Spring	FRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLSMFL
Ga0208559_1051521	3300026762	Hot Spring	MERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL
Ga0208447_1026333	3300026768	Hot Spring	FLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIIPVINRALELIRGSECDKAYNELNKLKMFL
Ga0208447_1026711	3300026768	Hot Spring	FRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL
Ga0208447_1029251	3300026768	Hot Spring	AVEVFSNINCEGNTQIIPIINRALELIRGGECDKAYNELNKLKMFL
Ga0208447_1029811	3300026768	Hot Spring	LPCLFMERSRAVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRVFL
Ga0208447_1041803	3300026768	Hot Spring	FRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRMLL
Ga0208447_1043481	3300026768	Hot Spring	CEGNTQIISVINRALELIRGGECDKAYNELNKLSMFL
Ga0208447_1059342	3300026768	Hot Spring	VEVFSNINCEGNTQIIPIINRALELIRGGECDKAYNELNKLKMFL
Ga0208314_1053821	3300026877	Hot Spring	NINCEGNTQIISVINRALELIRGGECDKAYNELNKLRMLL
Ga0208314_1205932	3300026877	Hot Spring	FSNINCEGNTQIISIINRALELIRGGECDKAYNELNKLKMFL
Ga0208313_1186672	3300026882	Hot Spring	SRAVEVFSNINCEGNTQILSIINRALELIRGGECDKAYNELNKLRMFL
Ga0208683_1087923	3300026906	Hot Spring	RSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELRKLSMFL
Ga0208683_1094941	3300026906	Hot Spring	VFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRMFL
Ga0208683_1211002	3300026906	Hot Spring	AVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRVFL
Ga0208312_1019871	3300027931	Hot Spring	ENLSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSIINRVLELIRGGECDKAYNELNKLRMFL
Ga0208312_1020961	3300027931	Hot Spring	LFMERSRAVEVFSNINCEGNTQIISVINRVLELIRGGECDKAYNELNKLRVFL
Ga0208312_1053231	3300027931	Hot Spring	FSNINCEGNTQIISVINRTLELIRGGECDKAYNELNKLRIFL
Ga0208549_1047481	3300027933	Hot Spring	HFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRTFL
Ga0208549_1080943	3300027933	Hot Spring	MERSRAVEVFSNINCEGNTQILSIINRVLEFIRGGECDKAYNELNKLKMFL
Ga0208549_1081204	3300027933	Hot Spring	NCEGNTQIISVINRALELIRDGECDKAYNELRKLSMFL
Ga0208549_1083591	3300027933	Hot Spring	KPENLSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELNKLRIFL
Ga0208549_1087471	3300027933	Hot Spring	AVFRLLPCLFMERSRAVEVFSNINCEGNTQIIPIINRALELIRGGECDKAYNELNKLKMF
Ga0208549_1270501	3300027933	Hot Spring	VFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRDGECDKAYNELNKLRMFL
Ga0208151_1064851	3300027937	Hot Spring	ENLSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQIISVINRALELIRGGECDKAYNELKKLSMFL
Ga0208151_1067251	3300027937	Hot Spring	ENLSLINHFLNAVFRLLPCLFMERSRAVEVFSNINCEGNTQILSIINRVLELIRGGECDKAYNELNKLKMFL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062913

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign