Metagenome Family F062905

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062905
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	68 residues
Representative Sequence	VSDYDAALARCGMLDEEALARPWPFRGRQMDVRYALYRTLEDAQEVHVRVSAVDHPESRRILALA
Number of Associated Samples	114
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.75 %
% of genes near scaffold ends (potentially truncated)	74.62 %
% of genes from short scaffolds (< 2000 bps)	67.69 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (23.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.24% β-sheet: 8.60% Coil/Unstructured: 45.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00496	SBP_bac_5	16.15
PF13561	adh_short_C2	10.77
PF04909	Amidohydro_2	9.23
PF02515	CoA_transf_3	4.62
PF08352	oligo_HPY	2.31
PF00378	ECH_1	2.31
PF00296	Bac_luciferase	2.31
PF10397	ADSL_C	2.31
PF08240	ADH_N	2.31
PF13419	HAD_2	1.54
PF04679	DNA_ligase_A_C	1.54
PF00106	adh_short	0.77
PF00923	TAL_FSA	0.77
PF13714	PEP_mutase	0.77
PF03668	ATP_bind_2	0.77
PF14863	Alkyl_sulf_dimr	0.77
PF00536	SAM_1	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	4.62
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.31
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.54
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.77
COG1660	RNase adaptor protein RapZ for GlmZ sRNA degradation, contains a P-loop ATPase domain	Signal transduction mechanisms [T]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.15 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.15 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.15 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	36.15 %
Unclassified	root	N/A	33.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.38 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.54 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	36.15 %
Unclassified	root	N/A	33.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.54 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	36.15 %
Unclassified	root	N/A	33.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.31 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.54 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	36.15 %
Unclassified	root	N/A	33.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	6.92 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	2.31 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.54 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.15 %
Unclassified	root	N/A	33.85 %
Chelativorans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans	6.92 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.31 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.54 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.15 %
Unclassified	root	N/A	33.85 %
unclassified Chelativorans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans	6.92 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.31 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.54 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.15 %
Unclassified	root	N/A	33.85 %
Chelativorans sp. J32	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	6.92 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.31 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.54 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101351713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300000559\|F14TC_101320629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300002560\|JGI25383J37093_10194097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300002912\|JGI25386J43895_10193605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300004156\|Ga0062589_101621447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300004479\|Ga0062595_102504851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300005181\|Ga0066678_11033427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300005332\|Ga0066388_108233268	Not Available	520	Open in IMG/M
3300005451\|Ga0066681_10671987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300005467\|Ga0070706_100466600	Not Available	1175	Open in IMG/M
3300005471\|Ga0070698_100911908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300005540\|Ga0066697_10574713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300005546\|Ga0070696_100284887	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005556\|Ga0066707_10437212	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300005559\|Ga0066700_10727151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300005564\|Ga0070664_102151884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300005713\|Ga0066905_100242802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	1378	Open in IMG/M
3300005764\|Ga0066903_103822281	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005840\|Ga0068870_10725334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300005841\|Ga0068863_102425702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300005844\|Ga0068862_101860106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	612	Open in IMG/M
3300006049\|Ga0075417_10092907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300006194\|Ga0075427_10013700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	1241	Open in IMG/M
3300006854\|Ga0075425_100021761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	7028	Open in IMG/M
3300009038\|Ga0099829_10485579	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300009090\|Ga0099827_11685771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300009148\|Ga0105243_10261744	Not Available	1549	Open in IMG/M
3300009162\|Ga0075423_11468675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	731	Open in IMG/M
3300009177\|Ga0105248_13049351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300010043\|Ga0126380_10679033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300010046\|Ga0126384_10318126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	1286	Open in IMG/M
3300010046\|Ga0126384_10607780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	958	Open in IMG/M
3300010046\|Ga0126384_11739280	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300010047\|Ga0126382_11001182	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010048\|Ga0126373_10049025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3747	Open in IMG/M
3300010048\|Ga0126373_12146392	Not Available	620	Open in IMG/M
3300010323\|Ga0134086_10422334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300010329\|Ga0134111_10188050	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300010360\|Ga0126372_12510576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300010361\|Ga0126378_11118180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	888	Open in IMG/M
3300010366\|Ga0126379_11197415	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010403\|Ga0134123_12611594	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300012207\|Ga0137381_10149555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2008	Open in IMG/M
3300012349\|Ga0137387_10071187	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300012349\|Ga0137387_10238026	Not Available	1311	Open in IMG/M
3300012685\|Ga0137397_11069346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300012927\|Ga0137416_11160291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300012929\|Ga0137404_10057171	All Organisms → cellular organisms → Bacteria → Proteobacteria	3014	Open in IMG/M
3300012948\|Ga0126375_10804025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300013306\|Ga0163162_13134714	Not Available	531	Open in IMG/M
3300015241\|Ga0137418_11185899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300015248\|Ga0180079_1032516	Not Available	711	Open in IMG/M
3300015373\|Ga0132257_101437051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300017656\|Ga0134112_10039391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1688	Open in IMG/M
3300017656\|Ga0134112_10348305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300018056\|Ga0184623_10491661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300018063\|Ga0184637_10733877	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	535	Open in IMG/M
3300018074\|Ga0184640_10089557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1327	Open in IMG/M
3300018076\|Ga0184609_10533433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300018433\|Ga0066667_11471559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300018468\|Ga0066662_11154923	Not Available	779	Open in IMG/M
3300018482\|Ga0066669_10383261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	1183	Open in IMG/M
3300022694\|Ga0222623_10013303	All Organisms → cellular organisms → Bacteria	3021	Open in IMG/M
3300022756\|Ga0222622_10610437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	788	Open in IMG/M
3300025933\|Ga0207706_11207970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300026325\|Ga0209152_10005653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4538	Open in IMG/M
3300026480\|Ga0257177_1001684	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300026542\|Ga0209805_1430723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300027379\|Ga0209842_1011072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1782	Open in IMG/M
3300027533\|Ga0208185_1069412	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300027654\|Ga0209799_1152848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300027671\|Ga0209588_1029344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1754	Open in IMG/M
3300027821\|Ga0209811_10226091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	711	Open in IMG/M
3300028711\|Ga0307293_10116382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	850	Open in IMG/M
3300030336\|Ga0247826_10137875	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300031226\|Ga0307497_10483157	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300031679\|Ga0318561_10226307	Not Available	1017	Open in IMG/M
3300031681\|Ga0318572_10024310	All Organisms → cellular organisms → Bacteria	3084	Open in IMG/M
3300031720\|Ga0307469_11592349	Not Available	627	Open in IMG/M
3300031724\|Ga0318500_10071502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1525	Open in IMG/M
3300031740\|Ga0307468_100227955	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300031740\|Ga0307468_100904561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300031740\|Ga0307468_102301472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300031769\|Ga0318526_10040348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	1747	Open in IMG/M
3300031782\|Ga0318552_10478858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300031799\|Ga0318565_10515978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300031859\|Ga0318527_10373854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300031896\|Ga0318551_10172580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1188	Open in IMG/M
3300031949\|Ga0214473_10405011	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300032002\|Ga0307416_101606851	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300032035\|Ga0310911_10679695	Not Available	596	Open in IMG/M
3300032174\|Ga0307470_10292930	Not Available	1099	Open in IMG/M
3300032180\|Ga0307471_100127573	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300032180\|Ga0307471_100328278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	1630	Open in IMG/M
3300032180\|Ga0307471_100957384	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1023	Open in IMG/M
3300032205\|Ga0307472_100899205	Not Available	819	Open in IMG/M
3300032829\|Ga0335070_10018933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	7979	Open in IMG/M
3300033289\|Ga0310914_11035432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	721	Open in IMG/M
3300033433\|Ga0326726_10330390	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	15.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.46%
Plants	Host-Associated → Plants	15.38%
Aquatic	Environmental → Aquatic	6.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.23%
Sediment	Environmental → Aquatic → Sediment	6.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.15%
Peat	Environmental → Terrestrial → Peat	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.38%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.31%
Sand	Environmental → Terrestrial → Soil → Sand	1.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.54%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.54%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_04379150	2065487018	Soil	VSDFNAALARCGMLDEDVLSRPWPFRGRQMDVRYALFRTLEEAQDGPREGLGRG
INPhiseqgaiiFebDRAFT_1013517133	3300000364	Soil	MRRGVNRWSDEENQDVSDYDAALARCGMLDEEALARPWPFRGRQMDVRYAFYRTLEDAQEVHVRVSAADHPESRRILALAQ
F14TC_1013206291	3300000559	Soil	VSDFDAALARCGLLDEGALARPWTWRGRPMDVRFAIYRTLEDAQEAHVRASAGTHPESRRILAMAQHAFGSLRALLAGLPSALL
JGI25383J37093_101940972	3300002560	Grasslands Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHPESRRILALAQR
JGI25384J37096_101779782	3300002561	Grasslands Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALFRTLEDAQEVQARVSAGPH
JGI25384J37096_102392921	3300002561	Grasslands Soil	VSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEEAQEVYVRVSA
JGI25382J37095_101665291	3300002562	Grasslands Soil	VSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEEAQEVYVRVSAGAHPE
JGI25386J43895_101936052	3300002912	Grasslands Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHPESRRILALAQRAFGDLR
Ga0062589_1016214472	3300004156	Soil	MREFDAALSGFAALDEEALGRPWSFRGQPMDVRYALYRTIEDAQETHARVVGRPLPESRRILSF
Ga0063356_1054113211	3300004463	Arabidopsis Thaliana Rhizosphere	MTAMTTTSEIDAALERFAALDEKDLAQPWRFRDKPTDVRYALYRTIEEAQEAIVSAAARPHP
Ga0062595_1025048511	3300004479	Soil	MTGHPNVDVALAQFAGRDEKELSQPWRFRDKPSEVRYALYHTLEDAQEILVRLVALAHPESRRILALAQRAFGELRGLLIGLPGDLL
Ga0066678_110334271	3300005181	Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHPESRRILALAQRAFGDL
Ga0066388_1038644712	3300005332	Tropical Forest Soil	MTDFDAALAGFAALDEAALARRWTFRDKPMDVRYALYRTLEDAQEVLVDLAARP
Ga0066388_1082332682	3300005332	Tropical Forest Soil	VAATSEVDAALASFAALDESELARPWRFRDKPADVRYAIYRTLEDAQEAYVGVAALPHPE
Ga0066681_106719871	3300005451	Soil	VTDFDAVLISCVALDEEALVRPWSGRGRQMDVREALYRTLEDAYEAQVRASAGQVPESRR
Ga0070706_1004666003	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAAATVEFDAALAGVAALDEEALARPWRFRGQPMDVRYALYRTLEDAQDAYVRVVARPLPESRRILSLAQRAFGDLRGML
Ga0070698_1009119082	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEEAQEVYVRVSAGAHPESCRILALAQHAFGGLRGLLAGL
Ga0070697_1007912551	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNIHEAVDAALERFAALDEKELGQAWRFRGKPMEFRYTLYRAIEEAQEASVRLAA
Ga0066697_105747132	3300005540	Soil	VSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALHRTLEEAQEVYVRVSAGAHPESRRILAL
Ga0070696_1002848872	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MREFDAALSGFAALDEEALGRPWSFRGQPMDVRYALYRTIEDAQETHARVVGRPLPESRRILSFAQRA
Ga0066707_104372121	3300005556	Soil	VSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEEAQEVYVRVSAGAHPESCRILVLAQHAFGGLRGLLAGLP
Ga0066700_107271511	3300005559	Soil	VSDFDSALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEDAQEVYVRVSAGAHPESRRILALAQHAFGGLRGLLAGLPGA
Ga0070664_1021518842	3300005564	Corn Rhizosphere	VSEYDAALARCGMLDEDQLGRPWAFRGRQMDVRYALYRTLEDAQEVFVRVSAGEQPEARRILALTQRA
Ga0066905_1002428022	3300005713	Tropical Forest Soil	VSDYDAALARCGVLHEEALGRPWPWQGRQMDVRYALYRSLEDAQEVYVRVAAGDHAESRRILALAQRAFGGLRALLAGFPATLLDR
Ga0066905_1004910751	3300005713	Tropical Forest Soil	VSDYDAALTRCGTLDEDALARPWSFRGRQMDVRYALYRTLEDAQEVLVRVAA
Ga0066903_1038222812	3300005764	Tropical Forest Soil	MADFDTTLAGFAALDEAELGTPWTFRGQQMDVRYALFRTLEDAQEAHVRVASAAIPESRRILSLAQRAFGDL
Ga0066903_1080985302	3300005764	Tropical Forest Soil	MSVSDYDAALARCGVLHEEALGRPWPWQGRQMDVRYALYRTLEDAQEVYVRVAAG
Ga0068870_107253341	3300005840	Miscanthus Rhizosphere	MTEFDAALSSFAALDEEVLGRPWSCRGQPMDVRYALYRTIEDAQEAHVRVAGRPLPESRRILSFA
Ga0068863_1024257022	3300005841	Switchgrass Rhizosphere	VSDYDAALARCGMLDEEALARPWPFRGRQMDVRYALYRTLEDAQEVHVRVSAADHPESRRILALAQQAFGSLRALLVGVP
Ga0068862_1018601062	3300005844	Switchgrass Rhizosphere	MTEFDAALSRVAALDEDALGRPWSFRGQMTDVRYALYRTIEDAQEVHVRVVGRPLPESRRILSFAQRAFGDL
Ga0075417_100929073	3300006049	Populus Rhizosphere	MSDFDVALRGFAALDGEALSRPWSWRDKAMDVRFALYRTLEDAQEVHVRLSAARIPE
Ga0075427_100137001	3300006194	Populus Rhizosphere	VSDFDAALARSGSLDEDVLSGPWAFRGRQMDVRYALYRTLEDAQDVFVRVSAAEHPESRRILALAQRAFGELRGLLAGLPDALLD
Ga0075425_1000217618	3300006854	Populus Rhizosphere	VAATPEVDAALASFAAFDETELARPWRFRDKPADARYAIYRTLEDAQEAYVRLAALPHPESRRILALAQ
Ga0099829_104855791	3300009038	Vadose Zone Soil	MGGAMTDFDTALTGFAALDEDALARPWSWRDGRMEVRYALYRTLEDAQEAYVRVSAGTFPESRRILALAQRA
Ga0099827_116857711	3300009090	Vadose Zone Soil	MTDFDTALTGFAALDEDALARPWSWRDGRMEVRYALYRTLEDAQEAYVRVSARTFPESRRILA
Ga0105243_102617443	3300009148	Miscanthus Rhizosphere	MTEFDAALSSVAALDEEALGRPWSFRGQPMDVRYALYRTIEDAQEAHVRVAGRPLPESRRILSFAQRAFGDLRGLL
Ga0111538_135040612	3300009156	Populus Rhizosphere	VSDFDAALARGGSLDEDVLSGPWTFRGRQMDVRYALYRTLDDAQDVFVRVSAAEHPESRRILALAQRAFGELRGLLAGLPDALLDKA
Ga0075423_114686751	3300009162	Populus Rhizosphere	VSEYDAALARCGMLDEDQLGRAWAFRGRQMDVRYALYRTLEDAQEVSVRVSAGEHPESRRILALTQRAFGSLRAL
Ga0105248_130493511	3300009177	Switchgrass Rhizosphere	MSDFDAALSGFAALDEEALGQPWSFRGQVMDVRYALYRTIEDAQEAHVRVAGRPLPESRRIL
Ga0126380_106790331	3300010043	Tropical Forest Soil	MSDFDVALRGFAALDEEALARPWSWRDKAMDVRFALYRTLEDAQEVHVRLSAARIPESRRIMALAQRAFGNLRGLLAG
Ga0126384_103181261	3300010046	Tropical Forest Soil	MGVSDYDAALARCGVLHEEALGRPWPWQGRQMDVRYALYRTLEDAQEVYVRVAAGDHAESQRILALAQRAFGGLRALLAELPAI
Ga0126384_106077801	3300010046	Tropical Forest Soil	MSDFDEALRGFAALDEQALARPWWWRDKAMDVRFALYRTLEDAQEARVRLSDARYPESRRIL
Ga0126384_117392801	3300010046	Tropical Forest Soil	VKHVSDYDAALTRCGTLDEDALARPWSFRGRQMDVRYALYRTLEDAQEVLVRVAAGEHPESRRILALAQRAFGG
Ga0126382_110011821	3300010047	Tropical Forest Soil	MTDFDAALAGFAALDEAALAQPWPFRDKPMDVRYALYRTLEDAQEVLVDLDARPHPESCRILALAQQAFGDLKGLVI
Ga0126373_100490255	3300010048	Tropical Forest Soil	VAAESDVDAALASFAALDETELARPWRFRDKPTDVRYAIYRTLEDAQGAYVQLTALHHPESRRILALAQRAFGDL
Ga0126373_121463922	3300010048	Tropical Forest Soil	VAATSEVDAALASFAALDESELARPWRFRDKPADVRYAIYRTLEDAQEAYVGVAALPHPEAQRILALARR
Ga0134086_104223341	3300010323	Grasslands Soil	MTRAIGGRRNENVSEFDAALIGCAALDEEALARPWTWRGRQTDVRYALYRTLEDAQEAHVRASAGE
Ga0134111_101880502	3300010329	Grasslands Soil	MSDFDMALRGFAALDEEALSRPWSWRDTAMDVRFALYRTLEDAQETYARLSSARYPESRRILALAQRAFG
Ga0134071_101481801	3300010336	Grasslands Soil	VTDYDAALARCGMLDEEALARPWPFRGRQMEVRYALYRTLEDAQEAHVRVSAADH
Ga0126372_125105761	3300010360	Tropical Forest Soil	MTDFDAALAGFAALDEAALARPWTFRDKPMDVRYALYRTLEDAQEVLVPLAACPHPESRRILALAQGAFGDLKGLVTGVPDEVLDKPPREGEW
Ga0126378_111181802	3300010361	Tropical Forest Soil	MADFDTTLAGFAALDEAELGTPWTFRGQQMDVRYALFRTLEDAQEAHVRVDSAAIPESRRILSLAQRAFGDLRGVLAGL
Ga0126379_111974151	3300010366	Tropical Forest Soil	MSDFDEALRGFAALDEAALARPWSYRDKAMDVRFALYRTLEDAQEARVRLSDARYPESRR
Ga0126381_1036040652	3300010376	Tropical Forest Soil	MADFDTAADFDTALAGFAALDEAELGTPWTFRGQQMDVRYALFRTLEDAQEAHVRVASA
Ga0134123_126115942	3300010403	Terrestrial Soil	MTAMTTTSAIDAALERFAALDEKDLAQPWRFRDKPTEIRYALYRTIEDAQEAIVGAAARPHPESRRILS
Ga0137381_101495553	3300012207	Vadose Zone Soil	VTDFDAALAGFAGMDEEALARAWPWRDKQMDVRYALYRTLEDAQEAHVRVSAGRHPESRRILAL
Ga0137387_100711873	3300012349	Vadose Zone Soil	VTDFDAALAGFAGMDEEALARAWPWRDKQMDVRYALYRTLEDAQEAHVRVSAGRHPESRRILALAQRAFGD
Ga0137387_102380261	3300012349	Vadose Zone Soil	MARITDVEAALEGFAALDEKELSAPWRFRDKPMDVRYVLYRTMEDAQEVLVRLTVLSHPESRRILALAQGAFGDLR
Ga0137397_101183683	3300012685	Vadose Zone Soil	MSDFDMALCGFAALDEEALSRPWSWRDTAMDVRFALYRTLEDAQEMYARLSSARY
Ga0137397_110693461	3300012685	Vadose Zone Soil	LATVVDEETGDVSDFDAALARCGLLDEDVLGRPWQWRGRQMDVRYALYRTLEEAQEVHVRVSAGAHPESRRILALAQHAFG
Ga0137416_111602911	3300012927	Vadose Zone Soil	VTPFDAALSGIAGLDEEALGRPWTWRGNAMDVRYALYRTLEEAQEAHARASAGPQPESRRILALAQRAFGNLRGLLIGLPADL
Ga0137404_100571714	3300012929	Vadose Zone Soil	LAGVVDEETGDVSDFDAALARCGLLDEDVLGRPWQWRGRQMDVRYAVYRTLEEAQEVHVRVSAGAHPESRRILALAQHAF
Ga0126375_108040252	3300012948	Tropical Forest Soil	VSDYDAALTRCGTLDEDVLARPWSFRGREMDVRYALYRTLEDAQEVLVRVAAGEHPESRRILALAQ
Ga0163162_131347142	3300013306	Switchgrass Rhizosphere	MTGSPEVDAALARFAALDEKELSRPWRFRDKPSDVRYALYRTLEDAQEVLVRLAAPPHTESR
Ga0134075_100746421	3300014154	Grasslands Soil	MSDFDAALRGFAALDDEALARPWPWRGRERDVRYALYRTLEDAQEVQARVSAGPH
Ga0137418_111858992	3300015241	Vadose Zone Soil	MSDFDVALRGFAALDEEALSRPWSWRDQAMDVRFALYRTLEDAQETYARLSSARYPESRRILALAQ
Ga0180079_10325162	3300015248	Soil	MAGALDVDEALARFAALDEKELARPWRFREKPMDVRYALYRTIEDAQEASVRVAALPHPESRRILSLA
Ga0134089_103641341	3300015358	Grasslands Soil	LADEEKWDVSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEEAQEVY
Ga0132256_1005220553	3300015372	Arabidopsis Rhizosphere	MSDFDVALRGFAALDGEALSRPWSWRDKAMDVRFALYRTLEDAQEVHVRLSAA
Ga0132257_1014370511	3300015373	Arabidopsis Rhizosphere	MGDFDVALRGFAALDGEALSRPWSWRDKAMDVRFALYRTLEDAQEVHVRLSAARIPESRRIMALAQRAFGNLRGLLAGL
Ga0182038_116391192	3300016445	Soil	MSDYDAALARCGMLDEDALARPWSWRSRQMDVRYALYRTLEDAQEVQVRAAT
Ga0134112_100393911	3300017656	Grasslands Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHPES
Ga0134112_103483052	3300017656	Grasslands Soil	MSDFDMALRGFAALDEEALARPWSWRDTTMDVRFALYRTLEDAQETYARLSSARYPESRRILALAQR
Ga0184623_104916611	3300018056	Groundwater Sediment	MTDFDAALAGFAALDEDVLSRPWRWLGGTLDARYALYRALEEAQEACVVAAAGPQPESRRILALAQRAFGDLHGLL
Ga0184637_107338771	3300018063	Groundwater Sediment	MTDFDTALIGFAALDEEELSSPWSWREGRMDVRYALYRTLEDAQEVYVRVSAGTHPESRRILALAQ
Ga0184640_100895571	3300018074	Groundwater Sediment	MSDFDAALRGFAALDDEVLARPWPWRGREMDLRYALYRTLEDAQEVHARVSAGSHPESRR
Ga0184609_105334331	3300018076	Groundwater Sediment	MSAFDAALRGFAALGDEALARPWSWRGREMDVRYALYRTLEDAQEVHARVSAGPHPESRRILALAQRAFGDL
Ga0066667_114715591	3300018433	Grasslands Soil	MTRAIGGRRNENVSEFDAALIGCAALDEEALARPWTWRGRQTDVRYALYRTLEDAQEGHVRASAGEHPD
Ga0066662_111549231	3300018468	Grasslands Soil	VSDFDSALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEDAQEVYVRVSAGAHPES
Ga0066662_124451641	3300018468	Grasslands Soil	VSEFDAALIGCAALDEEALARPWTWRGRQTDVRYALYRTLEDAQEAHVRAAA
Ga0066669_103832611	3300018482	Grasslands Soil	VSDFDAALARCGMLDEDALGRPWTWRGRQMDVRYALYRTLEDAQEAHVRVSAGAHPESRRILA
Ga0222623_100133035	3300022694	Groundwater Sediment	MIDFDAALAGFAALDEDALARPWRWREGTLNVREALYRSLEDAQEACVSAAAGPHPESRRILTLAQR
Ga0222622_106104372	3300022756	Groundwater Sediment	MRRGVNRWSDEENQDVSDYDAALARCGMLDEEALARPWPFRGRQMDVRYALYRTLEDAQEVHVRVSAADHPESRRILALAQEAF
Ga0207699_112872372	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSPEVDAALARFAALDEKELSQPWRFRDKPSDVRYALYRTLEDAQEVLVRLAAL
Ga0207706_112079701	3300025933	Corn Rhizosphere	MREFDAALSGFAALDEEALGRPWSFRGQPMDVRYALYRTIEDAQEAHARVVGRPLPESRVRLLGVLDRPV
Ga0209152_100056535	3300026325	Soil	VSDFDSALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEDAQEVYVRMSAGAHPESRRILALAQHAF
Ga0257177_10016843	3300026480	Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHPESR
Ga0209805_14307232	3300026542	Soil	VSDFDSALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEDAQEVYVRVSAGAHPESRRILALAQH
Ga0209474_103924361	3300026550	Soil	VSDFDAALARCGTLDEDVLGRPWPFRGRPMDVRYALYRTLEDAQEVYVRVSAGAH
Ga0209842_10110721	3300027379	Groundwater Sand	VTDFDAALAGFAGMDEEALARAWPWRDKQMDVRYALYRTLEDAQEAHVRVSAGQHPESRRILALAQRAFGDLR
Ga0209854_10321841	3300027384	Groundwater Sand	VTDFDAALAGFAGMDEEALARAWPWRDRQMDVRYALYRTLEDAQEAHVRVSA
Ga0208185_10694122	3300027533	Soil	MTDFDAALRGFAALDDEALARPWSWRDKPMDVRFALYRTLEDAQEAHARVSATVQSES
Ga0209799_11528482	3300027654	Tropical Forest Soil	MSDFDEALRGFAALDEQALARPWSWRDKAMDVRFALYRTLEDAQEARVRLPDARCPESRRILALAQRAFG
Ga0209588_10293443	3300027671	Vadose Zone Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHPESRRILALAQRAFGDLHG
Ga0209811_102260912	3300027821	Surface Soil	MRRGVNRWPDEENQDVSDYDAALARCGMLDEEALARPWPFRGRQMEVRYALYRTLEDAQEVHVRVSAADHPESRRILALAQQAFGCGQHRPADAFVGDE
Ga0209814_100091775	3300027873	Populus Rhizosphere	VGDFDAALARCGALDEDVLAGPWQFSGRTMDVRYALYRTLEEAQDIFVRVSAGEHAE
Ga0268265_109797982	3300028380	Switchgrass Rhizosphere	MADYDSALAGFAALDEDTLARPWMWRDGKMDVRHALYRTLEDAQEVAIPL
Ga0268264_109986721	3300028381	Switchgrass Rhizosphere	MTGSPEVDAALARFAALDEKELSRPWRFRDKPSDVRYALYRTLEDAQEVLVRLAALPHPE
Ga0137415_114433511	3300028536	Vadose Zone Soil	MSDFDAALRGFAALDDEALARPWPWRGREMDVRYALYRTLEDAQEVQARVSAGPHP
Ga0307293_101163822	3300028711	Soil	MIDFDAALAGFAALDEQALARPWRWRESTLNVREALYRSLEDAQEACVSAAGGPHPESRRILALAQ
Ga0247826_101378751	3300030336	Soil	MSDFDVALRGFAALDGEALSRPWSWRDKAMDVRFALYRTLEDAQEVHVRLSAAHIPESRRIMALAQRAYGNLRGLLAGLPADLLD
Ga0307497_104831571	3300031226	Soil	MRRGVNRWSDEENQNVSDYDAALARCGMLDEEALARPWPFRGRQMDVRYALYRTLEDAQEVHVRVSAADHPESRRILALAQEAFGS
Ga0318561_102263071	3300031679	Soil	VAAGSDVDAALASFAALDETELARPWRFRDKPTDVRYAIYRTLEDAQGAYVQLTALHHPESRRI
Ga0318572_100243104	3300031681	Soil	VAAGSDVDAALASFAALDETELARPWRFRDKPTDVRYAIYRTLEDAQGAYVQLTALHHPESRRILALAQRAFG
Ga0307469_108207673	3300031720	Hardwood Forest Soil	MSIHEDVDAALERFAALDEKELGQAWRFRDKPMEFRYTLYRAIEEAQEASVRLAALSHPESR
Ga0307469_115923492	3300031720	Hardwood Forest Soil	MAGRPAVDAALAQFAALDEKELTQPWQFRDKPSDVRYALYRTLEDAQEVLVRLAALPHPESRRILALAQR
Ga0318500_100715021	3300031724	Soil	MSDYDAALARCGMLDEDALARPWSWRGRQMDVRYALYRTLEDAQEVQVRAATGDHAESRRILALAQRAFGSLRALLVGA
Ga0307468_1002279551	3300031740	Hardwood Forest Soil	VSDFDAALARSGSLDEDVLSGPWTFRGRQMDVRYALYRTLEDAQDVFVRVSAAEHPESRRILALAQRA
Ga0307468_1009045612	3300031740	Hardwood Forest Soil	VSDYDAALARCGMLDEEALARPWPFRGRQMDVRYALYRTLEDAQEVHVRVSAVDHPESRRILALA
Ga0307468_1023014721	3300031740	Hardwood Forest Soil	LSDFDAALARCGLLDEEALGRPWPWRGRQMDVRYAIYRTLEDAQEAHVRVSAGAHPESQRILALAQHAFG
Ga0318526_100403482	3300031769	Soil	MSDYDAALARCGMLDEDALARPWSWRSRQMDVRYALYRTLEDAQEVQVRAATGDHAESRRILALAQRAFGSLRALLVGA
Ga0318521_103517862	3300031770	Soil	MSDYDAALARCGMLDEDALARPWSWRGRQMDVRYALYRTLEDAQEVQVHAATGD
Ga0318552_104788582	3300031782	Soil	MSDYDAALARCGMLDEDALARPWSWRGRQMDVRYALYRTLEDAQEVQVRAATGDHAESRRILALAQRAFGSLRALLV
Ga0318565_105159782	3300031799	Soil	VSDYDAALTRCGVLHEEALARPWSWRGRQMDVRYALYRTLEDAQEVYVRVAAGDHPESRRILALAQRAFGSLRA
Ga0318564_104979771	3300031831	Soil	MSDYDAALARCGMLDEDALARPWSWRGRQMDVRYALYRTLEDAQEVQVRAATGDHAESRRILALAQRAFGSLRALLVGAPAALLD
Ga0318527_103738541	3300031859	Soil	VSDYDAALTRCGVLHEEALARPWSWRGRQMDVRYALYRTLEDAQEVYVRVAAGDHPESRRILALAQRAFGSL
Ga0318551_101725802	3300031896	Soil	MSDYDAALARCGMLDEDALARPWSWRSRQMDVRYALYRTLEDAQEVQVHAATGDHAESRRILALAQRAFGSLRALLVGA
Ga0214473_104050111	3300031949	Soil	MIDFDAALAGFAALDGDALAQPWRWREGTLNVREALYRSLEDAQEACVSAAAGPHPESRRILAIAQRAFGDLR
Ga0307416_1016068512	3300032002	Rhizosphere	MADFDAALVGFAGFDEGALSRAWTWRDGKMDVRHALYRTLEDAQEAAVPVIAGPHPESRRILAL
Ga0318563_101829601	3300032009	Soil	VSDYDAALTRCGVLHEEALARPWSWRGRQMDVRYALYRTLEDAQEVYVRVAADD
Ga0310911_106796952	3300032035	Soil	VAAGSDVDAALASFAALDETELARPWRFRDKPTDVRYAIYRTLEDAQGAYVQLTALHHPESRRILALAQ
Ga0318510_100871332	3300032064	Soil	VSDYDAALTRCGVLHEEALARPWSWRGRQMDVRYALYRTLEDAQEVYVRVAAGDHP
Ga0307470_102929301	3300032174	Hardwood Forest Soil	MTGSPEVDAALARFAALDEKELSRPWRFRDKPSDVRYALYRTLEDAQEVLVRLAALPHPESRRILAVAQRAF
Ga0307471_1001275731	3300032180	Hardwood Forest Soil	MTGSPEVDAALARFAALDEKELSRPWRFRDKPSDVRYALYRTLEDAQEVLVRLAALPHPESRRI
Ga0307471_1003282781	3300032180	Hardwood Forest Soil	MRRGVNRWPDEENQDVSDYDAALARCGMLDEEALARPWPFRGRQMEVRYALYRTLEDAQEVHVRVSAADHPESRR
Ga0307471_1009573843	3300032180	Hardwood Forest Soil	MTEFDAALIGFAELDEETLARPWTWRDGRLNVREALYRALEDAQEAYVRVAAAAHPESCRILSLAQ
Ga0307472_1008992052	3300032205	Hardwood Forest Soil	MTGRTDVDAALARFATLDEQELSQPWRFRDRPSDVRYALYRTLEDAQETVVRLAALAHPESRRILALAQR
Ga0335070_100189331	3300032829	Soil	VATPSEVDAALAGFAALDERELARPWAFRDKPMDVRYALYRTIEDAQEALVRLGPPPPESRRILA
Ga0310914_110354322	3300033289	Soil	VSDYDAALTRCGVLHEEALARPWSWRGRQMDVRYALYRTLEDAQEVYVRVAAGDHPESR
Ga0326726_103303901	3300033433	Peat Soil	MAEIDAALLRFAALDEKELAQPWLYRDKPTDVRYALYRTIEESQEALVSAAARSHPESRRILSLAQRAFGDL
Ga0247829_104155442	3300033550	Soil	MSDFDVALRGFAALDGEALSRPWSWRDKAMDVRFALYRTLEDAQEVHVRLSAAHI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062905

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences