Metagenome / Metatranscriptome Family F062899

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062899
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	66 residues
Representative Sequence	MNSLAANRTVARPLPPPAGAAKHCSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ
Number of Associated Samples	93
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	21.54 %
% of genes from short scaffolds (< 2000 bps)	67.69 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (18.462 % of family members)
Environment Ontology (ENVO)	Unclassified (46.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.51% Coil/Unstructured: 91.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00593	TonB_dep_Rec	11.54
PF07690	MFS_1	10.00
PF13692	Glyco_trans_1_4	5.38
PF00069	Pkinase	3.85
PF07992	Pyr_redox_2	3.08
PF07715	Plug	3.08
PF00111	Fer2	1.54
PF00856	SET	1.54
PF00248	Aldo_ket_red	0.77
PF13561	adh_short_C2	0.77
PF00857	Isochorismatase	0.77
PF03795	YCII	0.77
PF00171	Aldedh	0.77
PF02463	SMC_N	0.77
PF13517	FG-GAP_3	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	15.38
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.77
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.77
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.77
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.62 %
Unclassified	root	N/A	35.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.62 %
Unclassified	root	N/A	35.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.62 %
Unclassified	root	N/A	35.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.92 %
Unclassified	root	N/A	35.38 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	36.92 %
Unclassified	root	N/A	35.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.38 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	13.08 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.54 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.38 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	13.08 %
Ideonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella	0.77 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.77 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.38 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	13.08 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.77 %
unclassified Ideonella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella	0.77 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.38 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	13.08 %
Ideonella sp. B508-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. B508-1	0.77 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.77 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002705\|JGI25156J39149_1000123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	56592	Open in IMG/M
3300002705\|JGI25156J39149_1005538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3621	Open in IMG/M
3300002705\|JGI25156J39149_1029250	Not Available	842	Open in IMG/M
3300002772\|JGI25164J39214_1008961	Not Available	990	Open in IMG/M
3300003316\|rootH1_10011133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. B508-1	7247	Open in IMG/M
3300003316\|rootH1_10046393	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300003320\|rootH2_10027067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10409	Open in IMG/M
3300003322\|rootL2_10014076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12483	Open in IMG/M
3300003323\|rootH1_10109750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1543	Open in IMG/M
3300003752\|Ga0055539_1000419	All Organisms → cellular organisms → Bacteria → Proteobacteria	15680	Open in IMG/M
3300003752\|Ga0055539_1018006	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300003761\|Ga0055535_1016852	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005327\|Ga0070658_10029284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4423	Open in IMG/M
3300005327\|Ga0070658_10073720	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300005327\|Ga0070658_10122382	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300005327\|Ga0070658_10448352	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300005327\|Ga0070658_11307848	Not Available	630	Open in IMG/M
3300005329\|Ga0070683_100989759	Not Available	807	Open in IMG/M
3300005330\|Ga0070690_100007600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6209	Open in IMG/M
3300005339\|Ga0070660_100019043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5025	Open in IMG/M
3300005339\|Ga0070660_100497489	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005340\|Ga0070689_100249543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1464	Open in IMG/M
3300005354\|Ga0070675_100354706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300005364\|Ga0070673_100006508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	7599	Open in IMG/M
3300005366\|Ga0070659_100322978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1290	Open in IMG/M
3300005366\|Ga0070659_100452051	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300005366\|Ga0070659_100462344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1078	Open in IMG/M
3300005366\|Ga0070659_100629773	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005456\|Ga0070678_101420771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	648	Open in IMG/M
3300005519\|Ga0077119_10004506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	16426	Open in IMG/M
3300005519\|Ga0077119_10038298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3588	Open in IMG/M
3300005519\|Ga0077119_10079547	All Organisms → cellular organisms → Bacteria → Proteobacteria	1937	Open in IMG/M
3300005519\|Ga0077119_10124905	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300005539\|Ga0068853_100465602	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005539\|Ga0068853_100651211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1003	Open in IMG/M
3300005563\|Ga0068855_101063308	Not Available	848	Open in IMG/M
3300005563\|Ga0068855_102133138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	564	Open in IMG/M
3300005577\|Ga0068857_101418880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	676	Open in IMG/M
3300005578\|Ga0068854_100005692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7875	Open in IMG/M
3300005616\|Ga0068852_100670479	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005616\|Ga0068852_101034029	Not Available	841	Open in IMG/M
3300006195\|Ga0075366_10423167	Not Available	820	Open in IMG/M
3300006881\|Ga0068865_101685154	Not Available	571	Open in IMG/M
3300009093\|Ga0105240_10093908	All Organisms → cellular organisms → Bacteria → Proteobacteria	3660	Open in IMG/M
3300009098\|Ga0105245_10819127	Not Available	970	Open in IMG/M
3300009545\|Ga0105237_10106187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	2800	Open in IMG/M
3300009551\|Ga0105238_11357253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	737	Open in IMG/M
3300009662\|Ga0105856_1318946	Not Available	524	Open in IMG/M
3300010152\|Ga0126318_10078823	Not Available	628	Open in IMG/M
3300010152\|Ga0126318_10182648	Not Available	619	Open in IMG/M
3300010375\|Ga0105239_12581237	Not Available	592	Open in IMG/M
3300010877\|Ga0126356_10716406	Not Available	715	Open in IMG/M
3300012212\|Ga0150985_101557092	Not Available	651	Open in IMG/M
3300013006\|Ga0164294_10535743	Not Available	796	Open in IMG/M
3300013308\|Ga0157375_12000686	Not Available	689	Open in IMG/M
3300014168\|Ga0181534_10247331	Not Available	946	Open in IMG/M
3300014325\|Ga0163163_10922228	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300015262\|Ga0182007_10135541	Not Available	830	Open in IMG/M
3300015374\|Ga0132255_101550675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1003	Open in IMG/M
3300020070\|Ga0206356_10563001	Not Available	592	Open in IMG/M
3300021402\|Ga0210385_10486426	Not Available	935	Open in IMG/M
3300021475\|Ga0210392_10807284	Not Available	701	Open in IMG/M
3300022908\|Ga0247779_1008110	All Organisms → cellular organisms → Bacteria → Proteobacteria	3586	Open in IMG/M
3300022908\|Ga0247779_1204414	Not Available	519	Open in IMG/M
3300025226\|Ga0209674_100007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1077082	Open in IMG/M
3300025230\|Ga0209563_123999	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300025231\|Ga0207427_100259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	41623	Open in IMG/M
3300025242\|Ga0209258_100123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	178931	Open in IMG/M
3300025242\|Ga0209258_100440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	47108	Open in IMG/M
3300025246\|Ga0209646_1000053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	284737	Open in IMG/M
3300025250\|Ga0209026_1017977	Not Available	1123	Open in IMG/M
3300025253\|Ga0209677_101665	All Organisms → cellular organisms → Bacteria → Proteobacteria	9341	Open in IMG/M
3300025253\|Ga0209677_110980	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300025256\|Ga0209759_1000839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	23996	Open in IMG/M
3300025256\|Ga0209759_1037950	Not Available	860	Open in IMG/M
3300025909\|Ga0207705_10019929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4798	Open in IMG/M
3300025909\|Ga0207705_10110974	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300025909\|Ga0207705_10330111	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300025909\|Ga0207705_10486911	Not Available	957	Open in IMG/M
3300025909\|Ga0207705_11148586	Not Available	597	Open in IMG/M
3300025909\|Ga0207705_11232507	Not Available	573	Open in IMG/M
3300025913\|Ga0207695_10018652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8015	Open in IMG/M
3300025919\|Ga0207657_10035523	All Organisms → cellular organisms → Bacteria	4468	Open in IMG/M
3300025919\|Ga0207657_10116373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	2203	Open in IMG/M
3300025919\|Ga0207657_10179023	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300025919\|Ga0207657_11232703	Not Available	567	Open in IMG/M
3300025924\|Ga0207694_10191123	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300025926\|Ga0207659_10127377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1960	Open in IMG/M
3300025927\|Ga0207687_10457886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1059	Open in IMG/M
3300025932\|Ga0207690_10538102	Not Available	948	Open in IMG/M
3300025932\|Ga0207690_11411734	Not Available	582	Open in IMG/M
3300025932\|Ga0207690_11451740	Not Available	574	Open in IMG/M
3300025936\|Ga0207670_10708566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	834	Open in IMG/M
3300025949\|Ga0207667_10108191	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300025949\|Ga0207667_12168160	Not Available	513	Open in IMG/M
3300025960\|Ga0207651_10002452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8873	Open in IMG/M
3300026041\|Ga0207639_11035577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M
3300026078\|Ga0207702_11309388	Not Available	719	Open in IMG/M
3300026088\|Ga0207641_10599045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1079	Open in IMG/M
3300026089\|Ga0207648_10337864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1356	Open in IMG/M
3300026116\|Ga0207674_10610495	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300026142\|Ga0207698_10816979	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300026911\|Ga0209620_1017685	Not Available	623	Open in IMG/M
3300028573\|Ga0265334_10051035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1587	Open in IMG/M
3300028783\|Ga0302279_10000109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	112439	Open in IMG/M
3300028789\|Ga0302232_10343897	Not Available	735	Open in IMG/M
3300029945\|Ga0311330_11384681	Not Available	502	Open in IMG/M
3300029951\|Ga0311371_10005973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	25181	Open in IMG/M
3300029984\|Ga0311332_11737992	Not Available	508	Open in IMG/M
3300029987\|Ga0311334_11874199	Not Available	512	Open in IMG/M
3300030294\|Ga0311349_10390075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	1317	Open in IMG/M
3300030520\|Ga0311372_10502820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1779	Open in IMG/M
3300030520\|Ga0311372_10520364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1737	Open in IMG/M
3300030521\|Ga0307511_10066017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	2701	Open in IMG/M
3300031047\|Ga0073995_11916716	Not Available	719	Open in IMG/M
3300031232\|Ga0302323_100149761	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300031232\|Ga0302323_101590319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	737	Open in IMG/M
3300031543\|Ga0318516_10035750	All Organisms → cellular organisms → Bacteria → Proteobacteria	2646	Open in IMG/M
3300031616\|Ga0307508_10873999	Not Available	523	Open in IMG/M
3300031716\|Ga0310813_10036080	All Organisms → cellular organisms → Bacteria → Proteobacteria	3538	Open in IMG/M
3300031730\|Ga0307516_10007993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12039	Open in IMG/M
3300031730\|Ga0307516_10547390	Not Available	811	Open in IMG/M
3300031797\|Ga0318550_10110988	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300031879\|Ga0306919_10027498	All Organisms → cellular organisms → Bacteria → Proteobacteria	3540	Open in IMG/M
3300031894\|Ga0318522_10201739	Not Available	753	Open in IMG/M
3300031902\|Ga0302322_101057493	Not Available	980	Open in IMG/M
3300031996\|Ga0308176_12788627	Not Available	520	Open in IMG/M
3300032074\|Ga0308173_10014522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5089	Open in IMG/M
3300032954\|Ga0335083_10479230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300034820\|Ga0373959_0172252	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	71.54%
Environmental	Environmental	28.46%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	71.54%
Terrestrial	Environmental → Terrestrial	25.38%
Aquatic	Environmental → Aquatic	3.08%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.77%
Roots	Host-Associated → Plants → Roots	20.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.92%
Soil	Environmental → Terrestrial → Soil	14.62%
Peat	Environmental → Terrestrial → Peat	9.23%
Rhizome	Host-Associated → Plants → Rhizome	3.85%
Freshwater	Environmental → Aquatic → Freshwater	3.08%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.54%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.23%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	8.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Endophytes	Host-Associated → Plants → Roots → Endophytes	6.92%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.08%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.54%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Lake	Environmental → Aquatic → Freshwater → Lake	0.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.77%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.77%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.23%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	8.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.38%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.08%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.54%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.77%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	18.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.77%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	8.46%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	6.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.62%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.62%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	3.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.08%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	3.08%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.31%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.54%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.54%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.54%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.77%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300002772	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS	Host-Associated	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003752	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2	Host-Associated	Open in IMG/M
3300003761	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025226	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025230	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025231	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025246	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)	Host-Associated	Open in IMG/M
3300025250	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes)	Host-Associated	Open in IMG/M
3300025253	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25156J39149_100012316	3300002705	Arabidopsis Root	MNPLAANRTAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
JGI25156J39149_10055384	3300002705	Arabidopsis Root	MNPLAANRTTVRPPAISRGARRYASFVEDLNWPASQPVPDRKAPRPTELWVPGPDGQWEGITPTLQ*
JGI25156J39149_10292501	3300002705	Arabidopsis Root	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPHGQWEGVTPTLQ*
JGI25164J39214_10089613	3300002772	Arabidopsis Rhizosphere	MNSLAANRTVARPLPAAARAAKLCSFVEDLNWPVPRQTPDRKPVRQTEVWVPGPNGQWEGVMPTLQ*
rootH1_100111334	3300003316	Sugarcane Root And Bulk Soil	MNPLAANRTAARPQPPLPGAPRHCSFVEDLNWPAPKTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
rootH1_100463934	3300003316	Sugarcane Root And Bulk Soil	MNPLAANRTAARPQPPLQGVSRHCSFVEDLNWPAPRTPDRKPARPTEVWVPGPNGRWEGVTPTLQ*
rootH2_100270676	3300003320	Sugarcane Root And Bulk Soil	MNPLAANRTAARPLPHPPAAKHCSFVEDLNWPAHQPTRDRKPVRPTEVWVPGRNGQWDGVTPTLQ*
rootL2_100140766	3300003322	Sugarcane Root And Bulk Soil	MNPLAANRTAARPQTPLPGAPRHCSFVEDLNWPAPKTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
rootH1_101097502	3300003323	Sugarcane Root And Bulk Soil	MNPLAANRTAARPQPVSPGAKHCSFVEDLNWPAHRPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0055539_100041911	3300003752	Arabidopsis Root	MNPLAANRTAARPQRPLPGVSRHCSFVEDLNWPAPRTPDRKPARPTEVWVPGPNGQWDGVTPTLQ*
Ga0055539_10180062	3300003752	Arabidopsis Root	MNSLAANRTAVRPPACMRGLDRHCSFVEDLNWPAARPSPDKKAPRRTEVWVPGPSGQWEGVTPTLQ*
Ga0055535_10168522	3300003761	Arabidopsis Root	MNPLAANRTAAPVLPPPPRAKHCSFVEDLNWPAHMPTPDKKTVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0070658_100292841	3300005327	Corn Rhizosphere	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKPPRPTDVWVPGPNGQWEGVTPTLQ*
Ga0070658_100737202	3300005327	Corn Rhizosphere	MNSLAANRTAARPLPPGRALEQHCSFVEDLNWPAARPTPEKKVPRPTDVWVPGPNGQWEGITPTLQ*
Ga0070658_101223822	3300005327	Corn Rhizosphere	MNSLAANRTVAPALPHMAGVAKHCSFVEDLNWPAPRSTPERKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0070658_104483521	3300005327	Corn Rhizosphere	GDTVSPAHLEPLSMNPLAANRTVARPPNLAGAAQHFSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0070658_113078481	3300005327	Corn Rhizosphere	MNSLAANHTAARPLPLGRALEQHCSFVEDLNWPAARPIPEKKVPRPTDVWVPGPNGQWEGVAPTLQ*
Ga0070683_1009897591	3300005329	Corn Rhizosphere	NPLAANRTAARPLPPPPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0070690_1000076002	3300005330	Switchgrass Rhizosphere	MNPLAANRTTARPQPRPPGAKHCSFVEDLNWPAHRPTPDKKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0070660_1000190434	3300005339	Corn Rhizosphere	MNSLAANHTAACPLPRGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGITPTLQ*
Ga0070660_1004974892	3300005339	Corn Rhizosphere	MNPLAANRTVARPPHLAGAAQHFSFVEDLNWPASRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0070689_1002495431	3300005340	Switchgrass Rhizosphere	MNPLAANRTTARPQPRPPGAKHCSFVEDLNWPAHRPTPDKKPARPTEVWVPGPNGQWEGV
Ga0070675_1003547062	3300005354	Miscanthus Rhizosphere	MNSLAANRTVARTLPPPAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0070673_1000065081	3300005364	Switchgrass Rhizosphere	ILELSPMNTLAANRTNARPLPLGRGLGKHCSFVEDLNWPAARPIPEKKVPRPTDVWVPGPNGQWEGVTPTLQ*
Ga0070659_1003229782	3300005366	Corn Rhizosphere	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKVPRPTDVWVPGPDGRWEGITPTLQ*
Ga0070659_1004520511	3300005366	Corn Rhizosphere	MNSLAANRTIAGPLPPPAGAAKHCSFVEDLNWPAIRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0070659_1004623442	3300005366	Corn Rhizosphere	MNPLAANRTIARPLPHPASAAKHCSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0070659_1006297731	3300005366	Corn Rhizosphere	MNSLAANHTAACPLPWGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGITPTLQ*
Ga0070678_1014207711	3300005456	Miscanthus Rhizosphere	MNPLAANRTTARPQPRPPGAKHCSFVEDLNWPVPRQTPDRKPVRQTEVWVPGPNGQWEGVMPTLQ*
Ga0077119_1000450612	3300005519	Arabidopsis Root	MNSLAANRTTALPLPLPRGTAKHCSFVEDLNWPGAQPTPDKKPARPTEVWVPGPNGNWEGVTPTLQ*
Ga0077119_100382984	3300005519	Arabidopsis Root	MNPLAANRTAARPPALSRGPRQQLSFVEDLNWPGARPVPDRKTPRPTAVWVPGPNGNWEGVTPTLQ*
Ga0077119_100795471	3300005519	Arabidopsis Root	MNSLAANHTVARPLPPGRGPATQCSFVEDLNWPAAQPTPEKKPKRPTDVWVPGPNGQWEGVTPTLQ*
Ga0077119_101249052	3300005519	Arabidopsis Root	MNSLAANRTATRPLPPRRGSARRCSFVEDLNWPAPQPAQDRKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0068853_1004656021	3300005539	Corn Rhizosphere	MNSLAANRTVARPLPPLAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGRWEGVTPTLH*
Ga0068853_1006512111	3300005539	Corn Rhizosphere	PLAANRTAARPLPPPPRAKHCSFVEDLNWPTHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0068855_1010633082	3300005563	Corn Rhizosphere	MNSLAANRTAIRPPVFVRGLDRHCSFVEDLNWPAARPSPDKKTPRPTEVWVPGPDGQWEGVTPTLQ*
Ga0068855_1021331382	3300005563	Corn Rhizosphere	MNPLAANRTTARPQPRPPGAKHCSFVEDLNWPAHRPTPDKKPARPTEVWVPGPNGQWE
Ga0068857_1014188802	3300005577	Corn Rhizosphere	MNSLAANRTVARTLPPPAGAAKHCSFVEDLNWPALRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0068854_1000056925	3300005578	Corn Rhizosphere	MNPLVANRIAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0068852_1006704793	3300005616	Corn Rhizosphere	LSLMNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGITPTLQ*
Ga0068852_1010340291	3300005616	Corn Rhizosphere	MNSLAANHTAARPLPLGRELEQRCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPDGRWEGITPTLQ*
Ga0075366_104231671	3300006195	Populus Endosphere	MNSLAANRTVARPLPPLAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0068865_1016851542	3300006881	Miscanthus Rhizosphere	MNSLAANRTVARPLPALARATKLCSFVEDLNWPVPHPAPDRKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0105240_100939082	3300009093	Corn Rhizosphere	MGSPAQLELLSMNPLAANRTAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0105245_108191273	3300009098	Miscanthus Rhizosphere	MNSLAANRTVARPLPPPAGAAKHCSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0105237_101061872	3300009545	Corn Rhizosphere	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGVTPTLQ*
Ga0105238_113572531	3300009551	Corn Rhizosphere	MNSLAANRTVARPLPHPAGAAKHCSFVEDLNWPALRPTPERKPVRPTEVWVPGPNGRWEGVTPTLH*
Ga0105856_13189461	3300009662	Permafrost Soil	MNSLAANHTAVPRRPVARGAAQRCSYVEDLNWPAARPTPDKKAPRPTEVWVPGPNGQWEGITPTLQ*
Ga0126318_100788232	3300010152	Soil	MNPLAANHTVVRPPVLVRDLDRHCSFVEDLNWPAARPVPDKKRQRPTEVWVPGPDGEWEGVTPTLQ*
Ga0126318_101826481	3300010152	Soil	HLEPSSMNPLAANRTAARPLPVPPSPRHCSFVEDLNWPAHVPTPARKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0105239_125812372	3300010375	Corn Rhizosphere	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGRWEGITPTLQ*
Ga0126356_107164062	3300010877	Boreal Forest Soil	MNPLAANRTAAPSPVLSTGPAQRCCFVEDLNWPAAQPMPTKKSPRPTEMWVPGPNGQWEGVTPTLQ*
Ga0150985_1015570922	3300012212	Avena Fatua Rhizosphere	MNSLAANHTAARPLPLGRELEQRCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGVTPTLQ*
Ga0164294_105357432	3300013006	Freshwater	MNPLAANRTVVLPPVVPRRPDAHCSFVEDLGWPGAVPVPDRKPARRVDVWVPGPNGQWGGITPTLQ*
Ga0157375_120006863	3300013308	Miscanthus Rhizosphere	LAANRTTARPQPRPPGAKHCSFVEDLNWPAHRPTPDKKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0181534_102473311	3300014168	Bog	PMNPLAANRTIVRPPAIPRGARQDAAFVEDLNWPASRPVPDRKGPRPTALWVPGRNGKCEGGGPTLQ*
Ga0163163_109222281	3300014325	Switchgrass Rhizosphere	LELLSMNPLAANRTAARPLPPPPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ*
Ga0182007_101355412	3300015262	Rhizosphere	MNSLAANHTVARPLPPGRRPAKQCSFVEDLNWPAAPPTPEKKPKRPTDVWVPGPNGQWEGVTPTLQ*
Ga0132255_1015506752	3300015374	Arabidopsis Rhizosphere	MNSLAANRTVARPPPPLAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ*
Ga0206356_105630012	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	PAQLELLSMNPLAANRTAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0210385_104864261	3300021402	Soil	MNSLAAIRTTAPRRAVAPDAAQRCSYVEDLNWPAAWPTPGKKAPRRPEMWVPGPNGRWEGVTPTLQ
Ga0210392_108072842	3300021475	Soil	MNSLAANRTAARPPLSCGSAKRCSYVEDLNWPAARPTPGRKAPRPTEVWVPGPNGQWEGVTPTLQ
Ga0247779_10081102	3300022908	Plant Litter	MNSLAANRTAARPLPPARGSGKHCSFVEDLNWPAARPTPDRKPPRPTEVWVPGRDGHWGGIVPTLQ
Ga0247779_12044141	3300022908	Plant Litter	MNPLAAIRTVRPLPAAQPGARHCSFVEDLNWPAGRPAPDRKAPRPTEVWVPGRDGQWGPAPTLQ
Ga0209674_100007784	3300025226	Arabidopsis Root	MNPLAANRTAARPQRPLPGVSRHCSFVEDLNWPAPRTPDRKPARPTEVWVPGPNGQWDGVTPTLQ
Ga0209563_1239991	3300025230	Arabidopsis Root	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGVTPTLQ
Ga0207427_10025913	3300025231	Arabidopsis Rhizosphere	MNSLAANRTVARPLPAAARAAKLCSFVEDLNWPVPRQTPDRKPVRQTEVWVPGPNGQWEGVMPTLQ
Ga0209258_10012318	3300025242	Arabidopsis Root	MNPLAANRTTVRPPAISRGARRYASFVEDLNWPASQPVPDRKAPRPTELWVPGPDGQWEGITPTLQ
Ga0209258_1004407	3300025242	Arabidopsis Root	MNPLAANRTAAPVLPPPPRAKHCSFVEDLNWPAHMPTPDKKTVRPTEVWVPGPNGQWEGVTPTLQ
Ga0209646_1000053180	3300025246	Arabidopsis Root	MNPLAANRTAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0209026_10179773	3300025250	Arabidopsis Root	MNSLAANRTTALPLPLPRGTAKHCSFVEDLNWPGAQPTPDKKPARPTEVWVPGPNGNWEGVTPTLQ
Ga0209677_1016655	3300025253	Arabidopsis Root	MNSLAANRTAVRPPACMRGLDRHCSFVEDLNWPAARPSPDKKAPRRTEVWVPGPSGQWEGVTPTLQ
Ga0209677_1109801	3300025253	Arabidopsis Root	NRTDARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0209759_100083913	3300025256	Arabidopsis Root	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPHGQWEGVTPTLQ
Ga0209759_10379501	3300025256	Arabidopsis Root	LAANRTAARPLPPTHGPVRHCSFVEDLNWPAPRPAPDKKPARPTEVWVPGPNGQWEGIAPTLQ
Ga0207705_100199294	3300025909	Corn Rhizosphere	MNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPTPGKKPPRPTDVWVPGPNGQWEGVTPTLQ
Ga0207705_101109742	3300025909	Corn Rhizosphere	MNPLAANRTVARPPNLAGAAQHFSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207705_103301111	3300025909	Corn Rhizosphere	MNSLAANHTAARPLPLGRALEQHCSFVEDLNWPAARPIPEKKVPRPTDVWVPGPNGQWEGVAPTLQ
Ga0207705_104869113	3300025909	Corn Rhizosphere	MNSLAANRTAIRPPVFVRGLDRHCSFVEDLNWPAARPSPDKKTPRPTEVWVPGPDGQWEGVTPTLQ
Ga0207705_111485862	3300025909	Corn Rhizosphere	MNSLAANRTVAPALPHMAGVAKHCSFVEDLNWPAPRSTPERKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207705_112325072	3300025909	Corn Rhizosphere	MNSLAANRTAARPLPPGRALEQHCSFVEDLNWPAARPTPEKKVPRPTDVWVPGPNGQWEGITPTLQ
Ga0207695_100186523	3300025913	Corn Rhizosphere	MNPLAANRTAARPLPPPLRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207657_100355234	3300025919	Corn Rhizosphere	MNSLAANHTAACPLPRGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGITPTLQ
Ga0207657_101163732	3300025919	Corn Rhizosphere	MNPLAANRTVARPPHLAGAAQHFSFVEDLNWPASRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207657_101790232	3300025919	Corn Rhizosphere	MNPLAANRTAARPLPPPPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207657_112327031	3300025919	Corn Rhizosphere	SLAANRTAVRPPACMRGLDRHCSFVEDLNWPAARPSPDKKAPRRTEVWVPGPSGQWEGVTPTLQ
Ga0207694_101911233	3300025924	Corn Rhizosphere	MGSPAQLELLSMNPLAANRTAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207659_101273772	3300025926	Miscanthus Rhizosphere	MISLAANRTVARPLPPLAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ
Ga0207687_104578862	3300025927	Miscanthus Rhizosphere	MNSLAANRTVARPLPPPAGAAKHCSFVEDLNWPAVRPTPERKPLRPTEVWVPGPNGQWEGVTPTLQ
Ga0207690_105381023	3300025932	Corn Rhizosphere	MNSLAANRTIAGPLPPPAGAAKHCSFVEDLNWPAIRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ
Ga0207690_114117341	3300025932	Corn Rhizosphere	ACPLPWGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGITPTLQ
Ga0207690_114517402	3300025932	Corn Rhizosphere	VSPAHLEPLSMNPLAANRTVARPPHLAGAAQHFSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207670_107085662	3300025936	Switchgrass Rhizosphere	MNPLAANRTTARPQPRPPGAKHCSFVEDLNWPAHRPTPDKKPARPTEVWVPGPNGQW
Ga0207667_101081913	3300025949	Corn Rhizosphere	MNSLAANHTAACPLPWGRELEQHCSFVEDLNWPAARPTPGKKAPRPTDVWVPGPNGQWEGITPTLQ
Ga0207667_121681602	3300025949	Corn Rhizosphere	MNSLAANRTAIRPPVFVRGLDRHCSFVEDLNWPAARPTPDKKTPRPTEVWVPGPDGQWEGVTPTLQ
Ga0207651_100024528	3300025960	Switchgrass Rhizosphere	ILELSLMNSLAANHTAARPLPLGRELEQHCSFVEDLNWPAARPIPEKKVPRPTDVWVPGPNGQWEGVTPTLQ
Ga0207639_110355772	3300026041	Corn Rhizosphere	MNSLAANRTVARPLPPLAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGRWEGVTPTLH
Ga0207702_113093881	3300026078	Corn Rhizosphere	MNSLAANRTAARPLPLGRALEQHCSFVEDLNWPAARPAPEKKVPRPTDVWVPGPNGQWEGVTPTLQ
Ga0207641_105990452	3300026088	Switchgrass Rhizosphere	MNPLAANRTTARPQPRPPGAKHCSFVEDLNWPAHRPTPDKKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207648_103378642	3300026089	Miscanthus Rhizosphere	MNPLAANRTIARPLPHPASAAKHCSFVEDLNWPAPRPTPERKPARPTEVWVPGPNGQWEGVTPTLQ
Ga0207674_106104953	3300026116	Corn Rhizosphere	TVARPSPPAGAAKHCSFVEDLNWPALRPTPERKPVRPTEVWVPGPNGRWEGVTPTLH
Ga0207698_108169791	3300026142	Corn Rhizosphere	MNPLAANRTAARPLPLPRPRAKHCSFVEDLNWPAHMPTPDRKPARPTEVWVPGPN
Ga0209620_10176852	3300026911	Forest Soil	MNSLAANRTAVRPLPPRTAATRCSYVEDLNWPAARPVPDKKSPRPTEVWVPGPNGQWEGVTPTLQ
Ga0265334_100510352	3300028573	Rhizosphere	MNPLAANRTAAHPLPAPQGPARRCFHVEDLNWPAIWPTPGKKAPRPTGLWMPGPDGRWEDVTPTLQ
Ga0302279_1000010964	3300028783	Bog	MNSLAANRTAVRPPVSKGLAQRCSFVEDLNWPSTPTPPGRKTQRPTEMWVPGPNGQWEGVTPTLQ
Ga0302232_103438971	3300028789	Palsa	MNSLAANRTAARPPIPCGSAKRCSYVEDLNWPAARPTPDKKPARPTEVWVPGPNGQWEGITPTLQ
Ga0311330_113846813	3300029945	Bog	MNPLAANRTTAPARPAAARAARRCTYVEDLNWPAARPTPGKKVPRRTELWVPGPNGQWEGVTPTLQ
Ga0311371_100059733	3300029951	Palsa	MNSLAANRTVVRPLPPRGAATRCSYVEDLNWPASRPAPDKKSPRPTEVWVPGRNGRWDGVTPTLQ
Ga0311332_117379922	3300029984	Fen	ATWGCRRTLESPVMNPLAANRTAARPHLVPTAGGTRCSCVEDLNWPGPHPTPAKKPVRPTEMWVPGPNGQWEAITPTLH
Ga0311334_118741992	3300029987	Fen	HTLELSPMNSLAANRTAARPPVLSSGLPKRCSFVEDLNWPAAEPTPSKKTRRPTEMWVPGPNGQWEGVTPTLQ
Ga0311349_103900752	3300030294	Fen	MTNPLAANRTAHRPLPTAHSASVEDLGWPAVRPTPPSRKPVRPVRTWVPGPNGQWEGVTPTLQ
Ga0311372_105028203	3300030520	Palsa	MNPLAAIRTAIPPRCLVPEAAQRCSYVEDLNWPTARPTPDKTPPRRTEMWVPGPNGRWEGVTPTLQ
Ga0311372_105203642	3300030520	Palsa	MNSLAAIRTTPPRRAVAPTAAQRCSYVEDLNWPAAWPTPDKKAPRRTGMWVPGPNGQWEGVTPTLQ
Ga0307511_100660173	3300030521	Ectomycorrhiza	MNSLAANHTAAFPLPLSRGMAQHCSFVEDLNWPGAQPTPDRKPARPTEVWVPGPNGNWEGVTPTLQ
Ga0073995_119167162	3300031047	Soil	TLGDRGRRRTLELSPMNSLAANRTAARPLPVSHGHARRCAYVEDLNWPAAWPTPAKKSPRPTEMWVPGPNGQWEGVTPTLQ
Ga0302323_1001497613	3300031232	Fen	MTNPLAANRTAHRPLPTSHSASVEDLGWPAVRPTPPSRKPVRPVRTWVPGPNGQWEGVTPTLQ
Ga0302323_1015903191	3300031232	Fen	MNPLAANRTAARPHLVPTAGGTRCSCVEDLNWPGPHPTPAKKPVRPTEMWVPGPNGQWEAITPTLH
Ga0318516_100357502	3300031543	Soil	MTGDIGLPAHQEPPPMTPLAANRTAARPLPPRRGIDRRCSFVEDLNWPAPDPVPGRKPTRPTDVWVPGPNGQWEGVPPTLQ
Ga0307508_108739991	3300031616	Ectomycorrhiza	MNSLAANPTATRAPVLSRSPTVRCSFVEDLNWPAVQPTPVKKTPRPTEMWVPGPNGQWEGVTPTLQ
Ga0310813_100360802	3300031716	Soil	MNSLAANRTVARPPPPLAGAAKHCSFVEDLNWPAVRPTPERKPVRPTEVWVPGPNGQWEGVTPTLQ
Ga0307516_100079933	3300031730	Ectomycorrhiza	MNPLAANRTAARPPVLSQAPRAHCSYVEDLNWPAAQPTPTKKTPRPTEMWVPGPNGQWEGVTPTLQ
Ga0307516_105473901	3300031730	Ectomycorrhiza	RTAARPPVLSRGPMAHCSYVEDLNWPAAQPTPTKKTPRPTEMWVPGPNGQWEGVTPTLQ
Ga0318550_101109883	3300031797	Soil	IGLPAHQEPPPMTPLAANRTAARPLPPRRGIDRRCSFVEDLNWPAPDPVPGRKPTRPTDVWVPGPNGQWEGVPPTLQ
Ga0306919_100274984	3300031879	Soil	MTPLAANRTAARPLPPRRGIDRRCSFVEDLNWPAPDPVPGRKPTRPTDVWVPGPNGQWEGVPPTLQ
Ga0318522_102017391	3300031894	Soil	PLAATRTAARPLPPRRGIDRRCSFVEDLNWPAPDPVPGRKPTRPTDVWVPGPNGQWEGVPPTLQ
Ga0302322_1010574933	3300031902	Fen	MNSLAANRTAARPHLVPTAGGTRCSCVEDLNWPGPHPTPAKKPVRPTEMWVPGPNGQWEAITPTLH
Ga0308176_127886271	3300031996	Soil	MNSLAANRTVVRPPACVRGLDRHCSFVEDLNWPAARPLPDKKAPRPTEVWVPGRAGQWEGVAPTLQ
Ga0308173_100145222	3300032074	Soil	MNPLAANHTVRPLPPIRPVAQRCSFVEDLNWPAAVPTPDKKPARPTEVWVPGRNGQWGGIAPTLQ
Ga0335083_104792302	3300032954	Soil	MNPLAANRTASRLPPPPQRCSFVEDLNWPAARPTPDKKPRRPTEVWVPGPNGRWEGVTPTLQ
Ga0373959_0172252_195_395	3300034820	Rhizosphere Soil	MNSLAANRTNAGPLPPPADAAKHCSFVEDLNWPAIRPTPERKPVRPTDVWVPGPNGQWEGVTPTLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062899

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences