Metagenome Family F062882

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062882
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	49 residues
Representative Sequence	WFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETIKF
Number of Associated Samples	64
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.91 %
% of genes near scaffold ends (potentially truncated)	88.46 %
% of genes from short scaffolds (< 2000 bps)	74.62 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (44.615 % of family members)
Environment Ontology (ENVO)	Unclassified (73.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (50.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01208	URO-D	5.38
PF00465	Fe-ADH	2.31
PF09335	SNARE_assoc	2.31
PF12146	Hydrolase_4	2.31
PF00106	adh_short	2.31
PF00694	Aconitase_C	2.31
PF07690	MFS_1	1.54
PF00248	Aldo_ket_red	1.54
PF02036	SCP2	1.54
PF04358	DsrC	1.54
PF00753	Lactamase_B	1.54
PF01467	CTP_transf_like	1.54
PF02954	HTH_8	1.54
PF02585	PIG-L	1.54
PF00011	HSP20	1.54
PF08241	Methyltransf_11	1.54
PF07992	Pyr_redox_2	1.54
PF02574	S-methyl_trans	1.54
PF00005	ABC_tran	1.54
PF00582	Usp	1.54
PF01642	MM_CoA_mutase	1.54
PF13511	DUF4124	0.77
PF13181	TPR_8	0.77
PF02700	PurS	0.77
PF13187	Fer4_9	0.77
PF01808	AICARFT_IMPCHas	0.77
PF01512	Complex1_51K	0.77
PF13344	Hydrolase_6	0.77
PF13401	AAA_22	0.77
PF04290	DctQ	0.77
PF01980	TrmO	0.77
PF08442	ATP-grasp_2	0.77
PF06414	Zeta_toxin	0.77
PF00702	Hydrolase	0.77
PF16576	HlyD_D23	0.77
PF02687	FtsX	0.77
PF04073	tRNA_edit	0.77
PF13557	Phenol_MetA_deg	0.77
PF00884	Sulfatase	0.77
PF02589	LUD_dom	0.77
PF00795	CN_hydrolase	0.77
PF05524	PEP-utilisers_N	0.77
PF00892	EamA	0.77
PF13207	AAA_17	0.77
PF08340	DUF1732	0.77
PF00589	Phage_integrase	0.77
PF04015	DUF362	0.77
PF01613	Flavin_Reduct	0.77
PF13932	GIDA_C	0.77
PF05226	CHASE2	0.77
PF13561	adh_short_C2	0.77
PF11219	DUF3014	0.77
PF00682	HMGL-like	0.77
PF01315	Ald_Xan_dh_C	0.77
PF06808	DctM	0.77
PF00436	SSB	0.77
PF02803	Thiolase_C	0.77
PF03972	MmgE_PrpD	0.77
PF02577	BFN_dom	0.77
PF02361	CbiQ	0.77
PF04199	Cyclase	0.77
PF06325	PrmA	0.77
PF04055	Radical_SAM	0.77
PF12694	cpYpsA	0.77
PF05015	HigB-like_toxin	0.77
PF11249	DUF3047	0.77
PF04280	Tim44	0.77
PF00378	ECH_1	0.77
PF12706	Lactamase_B_2	0.77
PF11136	DUF2889	0.77
PF02915	Rubrerythrin	0.77
PF00411	Ribosomal_S11	0.77
PF01568	Molydop_binding	0.77
PF07963	N_methyl	0.77
PF07977	FabA	0.77
PF04011	LemA	0.77
PF13458	Peripla_BP_6	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	5.38
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	2.31
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	2.31
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	2.31
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	2.31
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	2.31
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	2.31
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	2.31
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	1.54
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	1.54
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.54
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	1.54
COG2920	Sulfur transfer complex TusBCD TusE component, DsrC family (tRNA 2-thiouridine synthesizing protein C)	Translation, ribosomal structure and biogenesis [J]	1.54
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.54
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.54
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.77
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.77
COG1894	NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)	Energy production and conversion [C]	0.77
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.77
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.77
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.77
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.77
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.77
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.77
COG4395	Predicted lipid-binding transport protein, Tim44 family	Lipid transport and metabolism [I]	0.77
COG4656	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit	Energy production and conversion [C]	0.77
COG4706	Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain	Lipid transport and metabolism [I]	0.77
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.77
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.77
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.77
COG1720	tRNA (Thr-GGU) A37 N6-methylase	Translation, ribosomal structure and biogenesis [J]	0.77
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	0.77
COG1561	Endoribonuclease YloC, YicC family	Translation, ribosomal structure and biogenesis [J]	0.77
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.77
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	0.77
COG0764	3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase	Lipid transport and metabolism [I]	0.77
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.77
COG0619	ECF-type transporter transmembrane protein EcfT	Coenzyme transport and metabolism [H]	0.77
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.77
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.77
COG0138	AICAR transformylase/IMP cyclohydrolase PurH	Nucleotide transport and metabolism [F]	0.77
COG0100	Ribosomal protein S11	Translation, ribosomal structure and biogenesis [J]	0.77
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.15 %
Unclassified	root	N/A	17.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.77 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.77 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	33.85 %
Unclassified	root	N/A	17.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.85 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.77 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.77 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	33.85 %
Unclassified	root	N/A	17.69 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3.08 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.77 %
Candidatus Aerophobetes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes	0.77 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.77 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.69 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.46 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.54 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.54 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	0.77 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Candidatus Aerophobus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	0.77 %
Thermosediminibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales	0.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.77 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	0.77 %
Halanaerobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales	0.77 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.46 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.54 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	0.77 %
Halanaerobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae	0.77 %
Tepidanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae	0.77 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	0.77 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	0.77 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.77 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.77 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Candidatus Aerophobus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.46 %
Tepidanaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter	0.77 %
Halarsenatibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halarsenatibacter	0.77 %
Sporolituus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus	0.77 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.77 %
Desulfomonile	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile	0.77 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.77 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.77 %
unclassified Syntrophomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae	0.77 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Candidatus Aerophobus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.46 %
Tepidanaerobacter acetatoxydans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans	0.77 %
Sporolituus thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus → Sporolituus thermophilus	0.77 %
Halarsenatibacter silvermanii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halarsenatibacter → Halarsenatibacter silvermanii	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.77 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.77 %
Chlorobium/Pelodictyon group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group	0.77 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.77 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Candidatus Aerophobus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.46 %
Tepidanaerobacter acetatoxydans Re1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re1	0.77 %
Chlorobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	0.77 %
Sporolituus thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus → Sporolituus thermophilus	0.77 %
Halarsenatibacter silvermanii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halarsenatibacter → Halarsenatibacter silvermanii	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.77 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.77 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.77 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Candidatus Aerophobus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.46 %
Chlorobium limicola	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → Chlorobium limicola	0.77 %
Tepidanaerobacter acetatoxydans Re1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re1	0.77 %
Sporolituus thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus → Sporolituus thermophilus	0.77 %
Halarsenatibacter silvermanii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halarsenatibacter → Halarsenatibacter silvermanii	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.77 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.77 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.77 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.77 %
Candidatus Aerophobus	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	0.77 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000231\|TB_LI09_4DRAFT_10066173	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300000231\|TB_LI09_4DRAFT_10213827	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300003861\|Ga0031654_10256490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halarsenatibacter → Halarsenatibacter silvermanii	506	Open in IMG/M
3300004481\|Ga0069718_10050743	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300004481\|Ga0069718_10066679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	527	Open in IMG/M
3300004481\|Ga0069718_16323468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → Candidatus Aerophobus	1623	Open in IMG/M
3300006224\|Ga0079037_100687335	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300006224\|Ga0079037_102352673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300006930\|Ga0079303_10060174	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300009009\|Ga0105105_10302574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	864	Open in IMG/M
3300009037\|Ga0105093_10249956	Not Available	928	Open in IMG/M
3300009037\|Ga0105093_10900872	Not Available	520	Open in IMG/M
3300009078\|Ga0105106_10004877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9596	Open in IMG/M
3300009078\|Ga0105106_10052340	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3016	Open in IMG/M
3300009078\|Ga0105106_10092865	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300009078\|Ga0105106_10109597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2031	Open in IMG/M
3300009078\|Ga0105106_10469026	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300009078\|Ga0105106_10937405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	616	Open in IMG/M
3300009078\|Ga0105106_11021615	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009081\|Ga0105098_10352988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	719	Open in IMG/M
3300009082\|Ga0105099_10136265	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300009082\|Ga0105099_10160135	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300009082\|Ga0105099_10574902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300009085\|Ga0105103_10032325	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300009085\|Ga0105103_10080464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1675	Open in IMG/M
3300009085\|Ga0105103_10107176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1455	Open in IMG/M
3300009085\|Ga0105103_10169191	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300009085\|Ga0105103_10713696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	577	Open in IMG/M
3300009085\|Ga0105103_10714084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300009087\|Ga0105107_10010021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6524	Open in IMG/M
3300009087\|Ga0105107_10013948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	5589	Open in IMG/M
3300009087\|Ga0105107_10263512	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	1203	Open in IMG/M
3300009087\|Ga0105107_10859142	Not Available	631	Open in IMG/M
3300009091\|Ga0102851_10563776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1183	Open in IMG/M
3300009111\|Ga0115026_10085129	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300009111\|Ga0115026_10282334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1153	Open in IMG/M
3300009111\|Ga0115026_10359398	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300009111\|Ga0115026_10390658	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300009131\|Ga0115027_11898753	Not Available	502	Open in IMG/M
3300009146\|Ga0105091_10040986	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300009146\|Ga0105091_10422208	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009146\|Ga0105091_10613412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	563	Open in IMG/M
3300009146\|Ga0105091_10723862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	523	Open in IMG/M
3300009165\|Ga0105102_10179539	Not Available	1048	Open in IMG/M
3300009165\|Ga0105102_10386858	Not Available	741	Open in IMG/M
3300009166\|Ga0105100_10035869	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300009166\|Ga0105100_10633909	Not Available	656	Open in IMG/M
3300009166\|Ga0105100_10906403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300009167\|Ga0113563_10114787	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300009167\|Ga0113563_10389150	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300009169\|Ga0105097_10075073	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300009169\|Ga0105097_10096318	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300009171\|Ga0105101_10347360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300009171\|Ga0105101_10496052	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300009171\|Ga0105101_10618121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	539	Open in IMG/M
3300009179\|Ga0115028_10378227	Not Available	985	Open in IMG/M
3300014256\|Ga0075318_1106903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300018070\|Ga0184631_10225446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	772	Open in IMG/M
3300027675\|Ga0209077_1196769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	562	Open in IMG/M
3300027675\|Ga0209077_1227572	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027721\|Ga0209492_1040291	Not Available	1640	Open in IMG/M
3300027721\|Ga0209492_1068213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus → Sporolituus thermophilus	1255	Open in IMG/M
3300027721\|Ga0209492_1188609	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300027723\|Ga0209703_1050732	Not Available	1614	Open in IMG/M
3300027723\|Ga0209703_1295077	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → Chlorobium limicola	576	Open in IMG/M
3300027726\|Ga0209285_10187543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	645	Open in IMG/M
3300027726\|Ga0209285_10229061	Not Available	583	Open in IMG/M
3300027818\|Ga0209706_10008126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5445	Open in IMG/M
3300027818\|Ga0209706_10062954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1863	Open in IMG/M
3300027818\|Ga0209706_10357784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re1	684	Open in IMG/M
3300027818\|Ga0209706_10523073	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300027877\|Ga0209293_10366491	Not Available	742	Open in IMG/M
3300027897\|Ga0209254_10308324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1208	Open in IMG/M
3300027900\|Ga0209253_10139962	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300027902\|Ga0209048_10058190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3117	Open in IMG/M
3300027902\|Ga0209048_10113842	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300027902\|Ga0209048_10197759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1465	Open in IMG/M
3300027902\|Ga0209048_10414364	Not Available	922	Open in IMG/M
3300027972\|Ga0209079_10008271	All Organisms → cellular organisms → Bacteria	3503	Open in IMG/M
3300027972\|Ga0209079_10018554	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300027972\|Ga0209079_10034572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1694	Open in IMG/M
3300027972\|Ga0209079_10213202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	660	Open in IMG/M
3300027972\|Ga0209079_10329495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	516	Open in IMG/M
3300027979\|Ga0209705_10356144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	735	Open in IMG/M
3300031707\|Ga0315291_10145225	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300031707\|Ga0315291_10412538	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300031746\|Ga0315293_10425069	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031746\|Ga0315293_10705390	Not Available	750	Open in IMG/M
3300031772\|Ga0315288_10009088	All Organisms → cellular organisms → Bacteria	12533	Open in IMG/M
3300031772\|Ga0315288_10570344	Not Available	1099	Open in IMG/M
3300031834\|Ga0315290_10009661	All Organisms → cellular organisms → Bacteria	7168	Open in IMG/M
3300031873\|Ga0315297_10107776	All Organisms → cellular organisms → Bacteria	2217	Open in IMG/M
3300031885\|Ga0315285_10006856	All Organisms → cellular organisms → Bacteria	11744	Open in IMG/M
3300031885\|Ga0315285_10011441	All Organisms → cellular organisms → Bacteria	9049	Open in IMG/M
3300031885\|Ga0315285_10086235	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300031997\|Ga0315278_10027455	All Organisms → cellular organisms → Bacteria	5451	Open in IMG/M
3300031997\|Ga0315278_10041919	All Organisms → cellular organisms → Bacteria	4458	Open in IMG/M
3300031997\|Ga0315278_10130975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2552	Open in IMG/M
3300031997\|Ga0315278_10133655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2525	Open in IMG/M
3300031999\|Ga0315274_10053658	All Organisms → cellular organisms → Bacteria	5415	Open in IMG/M
3300032046\|Ga0315289_10444357	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300032046\|Ga0315289_10823108	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300032053\|Ga0315284_10662658	Not Available	1233	Open in IMG/M
3300032069\|Ga0315282_10559554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	630	Open in IMG/M
3300032070\|Ga0315279_10459935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	850	Open in IMG/M
3300032143\|Ga0315292_10113074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	2137	Open in IMG/M
3300032156\|Ga0315295_10060212	All Organisms → cellular organisms → Bacteria	3592	Open in IMG/M
3300032164\|Ga0315283_10642843	Not Available	1146	Open in IMG/M
3300032177\|Ga0315276_10540690	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300032342\|Ga0315286_10041979	All Organisms → cellular organisms → Bacteria	4805	Open in IMG/M
3300032342\|Ga0315286_11173091	Not Available	753	Open in IMG/M
3300032401\|Ga0315275_10596432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1234	Open in IMG/M
3300032516\|Ga0315273_10533648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1566	Open in IMG/M
3300032516\|Ga0315273_10759988	Not Available	1267	Open in IMG/M
3300033406\|Ga0316604_10093494	Not Available	1575	Open in IMG/M
3300033414\|Ga0316619_10592529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	920	Open in IMG/M
3300033419\|Ga0316601_100414930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1271	Open in IMG/M
3300033433\|Ga0326726_10403467	All Organisms → cellular organisms → Bacteria → Proteobacteria	1297	Open in IMG/M
3300033434\|Ga0316613_10205868	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300033434\|Ga0316613_10280570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1097	Open in IMG/M
3300033434\|Ga0316613_10584018	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300033487\|Ga0316630_10392674	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1104	Open in IMG/M
3300033488\|Ga0316621_10546947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	816	Open in IMG/M
3300033488\|Ga0316621_11044792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	611	Open in IMG/M
3300033513\|Ga0316628_100810347	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300033513\|Ga0316628_101598475	Not Available	868	Open in IMG/M
3300033521\|Ga0316616_102468609	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300033557\|Ga0316617_100381761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1234	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	87.69%
Terrestrial	Environmental → Terrestrial	12.31%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.92%
Soil	Environmental → Terrestrial → Soil	10.77%
Sediment	Environmental → Aquatic → Sediment	0.77%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.77%
Peat	Environmental → Terrestrial → Peat	0.77%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	52.31%
Lake	Environmental → Aquatic → Freshwater → Lake	23.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	52.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	23.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.77%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.15%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.85%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	44.62%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	23.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.15%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.38%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300014256	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_LI09_4DRAFT_100661734	3300000231	Groundwater	MSAERWFRKKLQMQGAQKLRSEAHLRVRRNDEVEAQRRRWTFYETISK*
TB_LI09_4DRAFT_102138271	3300000231	Groundwater	ERWFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRRRWTFYETINTDSGVCA*
Ga0031654_102395671	3300003861	Freshwater Lake Sediment	WFRKKLQMQGAQKLRSEAYLQVRCNDEVEAQRSRWTFYETIKICAPHFVKPSVIG*
Ga0031654_102564901	3300003861	Freshwater Lake Sediment	XWXRKKLQMQGAQKLRSEAHLQVRRNDEVAAQSRSERDRWTFYETITLMGVKIA*
Ga0069718_100507432	3300004481	Sediment	SREGWFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYETITDN*
Ga0069718_100666792	3300004481	Sediment	FRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYETINIRHFENL*
Ga0069718_163234682	3300004481	Sediment	VKNFAKGWLRKKLQMQGAQKLRSEAHLRVHRNDEVEAQRRRWTFYEAISF*
Ga0079037_1006873351	3300006224	Freshwater Wetlands	RKKLQMQGAQKLRSEAHLQVRRNDEVAAQSRSERDRWTFCETSKSVKT*
Ga0079037_1023526731	3300006224	Freshwater Wetlands	WFRKKLQMQGAQKLRREAHEQVRRNDEVAAQRRRWTFYETINYSPKDSPTR*
Ga0079303_100601742	3300006930	Deep Subsurface	MPGKRWFYQKVQMQGAQKIIIGAIHELPLRVRRNDEVAAQSRSERDR*
Ga0105105_103025741	3300009009	Freshwater Sediment	KRWFRKKLQMPGAQKLRNEVHSRVRRRWIFYETIKIT*
Ga0105093_102499561	3300009037	Freshwater Sediment	MGGFSGKICERWFCKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRSWTF
Ga0105093_109008721	3300009037	Freshwater Sediment	KKLQMQGAQKLRSEAHLQVRRKDEVDAQRRRWTFYETINDDPIKSL*
Ga0105106_1000487716	3300009078	Freshwater Sediment	SARKKSEKRWFRKKLQMQGAQKLRSGAHLLVRRNDEVAAQRRRWTFYEAIVY*
Ga0105106_100523403	3300009078	Freshwater Sediment	MGGFSGKICERWFCKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRSWTFYETIK*
Ga0105106_100928651	3300009078	Freshwater Sediment	ERWFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYETIRLNKHE*
Ga0105106_101095971	3300009078	Freshwater Sediment	ERWFRKKLQMQGAQKLRSEAHSQVRCNDEVEAQRRRWTFYETIN*
Ga0105106_104690262	3300009078	Freshwater Sediment	MPEPWFRKTLQMPGAQKLRREAHFRVRRNDEVAAQCRRWTFYETIKEGRLDV*
Ga0105106_109374051	3300009078	Freshwater Sediment	RWLCKKLQMQGAQKLRSEAHLQVRRNDEVAAQRSRWTFYEAIKLFYRPF*
Ga0105106_110216151	3300009078	Freshwater Sediment	RWFRKKLQMPGAQKLRSAAYLLVRCNDEVEAQRRRWTFYETIKLHRNFSAKW*
Ga0105098_103529881	3300009081	Freshwater Sediment	RWFRKKLQMQGAQKLRNEAHLRMRRNDKVAAQRRRWTFYETIRFHG*
Ga0105099_101362652	3300009082	Freshwater Sediment	MGGFSGKICERWFCKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRSWTFYETIN*
Ga0105099_101601352	3300009082	Freshwater Sediment	RKKLQMQGAQKLRSEAHLRVHRNDEVEAQRRRWTFYEAISF*
Ga0105099_105749021	3300009082	Freshwater Sediment	KLQMQGAQKIIIVGAIHESPLRVRCNDEVEAQRRRWTFYEPIKNIYFLSA*
Ga0105103_100323252	3300009085	Freshwater Sediment	VKNFAKGWLRKKLQMQGAQKLRSEAHLRVRRNDEVEAQRRRWTFYEAISF*
Ga0105103_100804644	3300009085	Freshwater Sediment	CKKLQMPGAQKLRSEAYEQVRCNDEVEVQRRRWTFCETIIFLDLFFRR*
Ga0105103_101071765	3300009085	Freshwater Sediment	WFCKKLQMPGAQKLRSEEHLQVPRNDKVEAQRRGWTFYETIKKS*
Ga0105103_101691913	3300009085	Freshwater Sediment	SAERWLCKKLQMQGAQKPRSEAHLQVRRNDEVAAQRRRWTFYEAIKIAPGSRFE*
Ga0105103_103409701	3300009085	Freshwater Sediment	PRRWFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYETIMIHCPHRENR*
Ga0105103_107136962	3300009085	Freshwater Sediment	PKRWFRKKLQMPGAQKLRSEAYLTVRRNDEVEAQRRRWTFYETIKF*
Ga0105103_107140842	3300009085	Freshwater Sediment	WFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETIKF*
Ga0105107_1001002110	3300009087	Freshwater Sediment	KKLQMQGAQKLRSEAHLQVRRNDEVAAQRSRWTFYEAIKLFYRPF*
Ga0105107_100139488	3300009087	Freshwater Sediment	MSSKRWFRKKLQMQGAQKLRSEAHLRVRRNDEVEAQRHRWTFYETIKFPAEKRG
Ga0105107_102635123	3300009087	Freshwater Sediment	FRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYETIKNR*
Ga0105107_108591422	3300009087	Freshwater Sediment	KKSPKRWFRKKLQMQGAQKLRSEAHFQVRRNDKVAAQRRRWTFYETIIFV*
Ga0102851_105637761	3300009091	Freshwater Wetlands	MNSLKSLKRWFRKKLQMQGAQKLRSEAHLQVCRNDEVEAQSRSERDRWTFYET
Ga0115026_100851291	3300009111	Wetland	KRWFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQSRSERDRWTFCETSKSVKI*
Ga0115026_102823342	3300009111	Wetland	RKKLQMQGAQKLRSEAHLQLRRNDEVAAQSRSERDRWTFYETIKTG*
Ga0115026_103593981	3300009111	Wetland	RWFRKKLQVQGAQKLRSEAHLWVRRNDEVAAQRSRWTFYETIKF*
Ga0115026_103906581	3300009111	Wetland	KRGERWFRKKLQMQGAQKLRSEAHLRVRRNDEVAAQRSRWTFYETIF*
Ga0115027_118987532	3300009131	Wetland	KRWFRKKLQMQGAQKPRSEAHLQVRRNDEVAAQSRSERDRWTFCKTIIL*
Ga0105091_100409862	3300009146	Freshwater Sediment	VKNFAKGWLRKKLQMQGAQKLRSEAHLRVRRNDEVEAQRRRWTFYEAISL*
Ga0105091_104222083	3300009146	Freshwater Sediment	MPEPWFRKTLQMPGAQKLRREAHFRMRRNDEVAAQCRRWTFYETIKEGRLDV*
Ga0105091_106134121	3300009146	Freshwater Sediment	KKSPERWFCKKLQMPGAQKLRSEEHLQVPRNDKVEAQRRGWTFYETIKKS*
Ga0105091_107238621	3300009146	Freshwater Sediment	RFRKKLQMQGAQKLRSEAHKQVRRNDEVAVQSCSERGRWTFFKTVLIK*
Ga0105102_101795391	3300009165	Freshwater Sediment	MGGFSGKICERWFCKKLQMQCAQKLRSEAHLRVRRNDEVAAQRRSWTFYETIK*
Ga0105102_103868581	3300009165	Freshwater Sediment	RKKLQMQGAQKLRSEAYEQVRCNDEVEAQRRRWTFYEAITLAPFFAR*
Ga0105100_100358691	3300009166	Freshwater Sediment	RWFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETINI*
Ga0105100_106339092	3300009166	Freshwater Sediment	RKKLQMQGAQKLRSEAHLQVRRNDEVDAQRRRWTFYETIKYHRA*
Ga0105100_109064031	3300009166	Freshwater Sediment	VKNFAKGWLRKKLQMQGAQKLRSEAHLRVHRNDEVEAQRRRWTFYEAIS
Ga0113563_101147873	3300009167	Freshwater Wetlands	KKLQMQGAQKLRSEAHLQVRRNDEVAAQSPSERDRWTFCETSKSVKI*
Ga0113563_103891501	3300009167	Freshwater Wetlands	RWFRKKLQMQGAQKLRSEAHLRVRRNDEVAAQRSRWTFYETIF*
Ga0105097_100750731	3300009169	Freshwater Sediment	RWFRKKLQMQGAQKLRREAHLRVRRNDEVEAQRRRWTFYETIKFAEY*
Ga0105097_100963183	3300009169	Freshwater Sediment	GKICERWFCKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRSWTFYETIK*
Ga0105101_103473602	3300009171	Freshwater Sediment	RKKLQMQGAQKLRSEAHLQVRRNDEVEAQRRRWTFYETITLQFFEKGAS*
Ga0105101_104960522	3300009171	Freshwater Sediment	GWFRKKLQMQGAQKPRSEAHILVRRNDEVEAQRRRWTFYETITGSAWR*
Ga0105101_106181212	3300009171	Freshwater Sediment	WFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYETIMIHCPHRENR*
Ga0115028_103782271	3300009179	Wetland	RKKLQMQGAQKLSSEAHFRVRRSDEVAAQSRSERDRWTFYETITILFLKK*
Ga0075318_11069032	3300014256	Natural And Restored Wetlands	RKKSAKRWFRKKLQMPGAQKLRSEAHLRVRRSDEVEAQRRRWTFYETIK*
Ga0184631_102254461	3300018070	Groundwater Sediment	MQGAQKLRNEAYLWVRCNDEGEAQRRRWTFYEAIKSRVLQEGFHLKNI
Ga0209077_11967691	3300027675	Freshwater Sediment	KKSPERWFCKKLQMPGAQKLRSEEHLQVPRNDKVEAQRRGWTFYETIKKS
Ga0209077_12275722	3300027675	Freshwater Sediment	MPEPWFRKTLQMPGAQKLRREAHFRMRRNDEVAAQCRRWTFYETIKEGRLDV
Ga0209492_10402912	3300027721	Freshwater Sediment	WFRKKLQMQGAQKLRSEAHLQVRRNDEVDAQRRRWTFYETIKYHRA
Ga0209492_10682133	3300027721	Freshwater Sediment	KKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETIKPTGTGF
Ga0209492_11886092	3300027721	Freshwater Sediment	WLCKKLQMQGAQKLRSEAHLLVRRNDEVEAQRRRWTFYEAIKFRKGEKNIWR
Ga0209703_10507322	3300027723	Freshwater Sediment	KKSAEGWFRKKLQMQGAQKLRSEAHLQVRRNDEVDAQRRRWTFYETIKYHRA
Ga0209703_12950772	3300027723	Freshwater Sediment	WFRKKLQMQGAQKLRSEAHLQVRRSDEVEAQRRRWTFYETINPC
Ga0209285_101875431	3300027726	Freshwater Sediment	FRKKLQMQGAQKLRSEAHKQVRRNDEVAVQSCSERGRWTFYKTVLIK
Ga0209285_102290611	3300027726	Freshwater Sediment	MTSKKSGDRWFGKKLQMQGAQKLRSEGHLQVRRNDEVEAQRRRWTFSETIE
Ga0209706_100081262	3300027818	Freshwater Sediment	MGGFSGKICERWFCKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRSWTFYETIK
Ga0209706_100629541	3300027818	Freshwater Sediment	VKNFAKGWLRKKLQMQGAQKLRSEAHLRVHRNDEVEAQRRRWTFYE
Ga0209706_103577842	3300027818	Freshwater Sediment	RWFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETIKPTGTGF
Ga0209706_105230731	3300027818	Freshwater Sediment	KKLAERWFRKKLQMQGAQKLRSEAHFQVRRNDKVAAQRRRWTFYETIIFV
Ga0209293_103664913	3300027877	Wetland	KRGERWFRKKLQMQGAQKLRSEAHLRVRRNDEVAAQRSRWTFYETIF
Ga0209254_103083241	3300027897	Freshwater Lake Sediment	WFRKKLQMPGAQKLRSEAHLQVRRNDEVEAQRRRWTFYETINFRHF
Ga0209253_101399623	3300027900	Freshwater Lake Sediment	RWFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETIKFC
Ga0209048_100581901	3300027902	Freshwater Lake Sediment	KSPERWFRKKLQMQGAQKLRSEAYLQVRCNDEGEAQRRRWTFYETISTEFYP
Ga0209048_101138421	3300027902	Freshwater Lake Sediment	KVAERWFRKKLQMQGAQKLRSEAYLQVRCNDEGEAQRSRWTFYETITFG
Ga0209048_101977592	3300027902	Freshwater Lake Sediment	RKKSPERWLRKKLQMQGAQKLRSEAYLQVRCNDEVEAQRRRWTFYETIIP
Ga0209048_104143641	3300027902	Freshwater Lake Sediment	FRKKLQMQGAQKLRSEAYLQVRCNDEVEAQRSRWTFYETINNR
Ga0209079_100082712	3300027972	Freshwater Sediment	MPEPWFRKTLQMPGAQKLRREAHFRVRRNDEVAAQCRRWTFYETIKEGRLDV
Ga0209079_100185541	3300027972	Freshwater Sediment	FHKKLQMPGAQKLRRAAHYQVRRNDEVEAQRRRWTFYETIKFACA
Ga0209079_100345723	3300027972	Freshwater Sediment	KKYAERWFCKKLQMQGAQKLRSEAHLQVRRNDEVEAQRSRWTFYETICMNRRETGRGRR
Ga0209079_102132021	3300027972	Freshwater Sediment	AERWLCKKLQMQGAQKPRSEAHLQVRRNDEVAAQRRRWTFYEAIKIAPGSRFE
Ga0209079_103294952	3300027972	Freshwater Sediment	TKRWFRKKLQMPGAQKLRSEAYLTVRRNDEVEAQRRRWTFYETIKF
Ga0209705_103561442	3300027979	Freshwater Sediment	ERWFRKKLQMQGAQKLRSEAHSQVRCNDEVEAQRRRWTFYETIN
Ga0315291_101452251	3300031707	Sediment	WFRKKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETISN
Ga0315291_104125382	3300031707	Sediment	AERWFRKKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETINVGMVEYWEN
Ga0315293_104250692	3300031746	Sediment	AERWFRKKLQLQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETIKICLSNWEEA
Ga0315293_107053902	3300031746	Sediment	WFRKKIQMPGAQKLRSEAHLQVRCNDEVEAQRRRWTFYETINFVTFIFSGR
Ga0315288_1000908815	3300031772	Sediment	MQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYDFINVGMVEYWEN
Ga0315288_105703442	3300031772	Sediment	WFCKKLQMPGAQKLRSEAHLHVRRNDEVEAQRRRWTFYETFTFRPL
Ga0315290_100096611	3300031834	Sediment	FRKKLQLQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETIKICLSNWEEA
Ga0315297_101077763	3300031873	Sediment	GRFRKKLQMQGAQKLRREAYLHVRCNDEVEAQRSRWTFYDFINVGMVEYWEN
Ga0315285_100068561	3300031885	Sediment	RWFRKKLQLQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETIKICLSNWEEA
Ga0315285_100114416	3300031885	Sediment	MQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETINVGMVEYWEN
Ga0315285_100862351	3300031885	Sediment	RWFRKKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETISN
Ga0315278_100274556	3300031997	Sediment	KKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYDFINVGMVEYWEN
Ga0315278_100419191	3300031997	Sediment	WLRKKLQMQGAQKLRSEAHLRVRRSDEVAAQRRRWTFYEAIKKGGWQ
Ga0315278_101309752	3300031997	Sediment	KSPERWFRKKLQMQGAQKLRSEAHLQVRRSDEVEAQRSRWTFYETIKFKDSEH
Ga0315278_101336551	3300031997	Sediment	WLRKKLQMQGAQKLRSETHLRVRRNDEVEAQRRRWTFYEAINLGRKIWRD
Ga0315274_100536587	3300031999	Sediment	RWFRKKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETINLDEIVKSP
Ga0315289_104443571	3300032046	Sediment	WFRKKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYDFINVGMVEYWEN
Ga0315289_108231081	3300032046	Sediment	RALKLQLQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETIKICLSNWEEA
Ga0315284_106626582	3300032053	Sediment	KRWFRKKLQMQGAQKLRSEAHLQVRRNDEVEAQRRRWTFYETIRKGRQTTR
Ga0315282_105595541	3300032069	Sediment	KKLQMQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETINIELGPYHIP
Ga0315279_104599352	3300032070	Sediment	FRKKLQMQGAQKLRSEAYLDVRCNDEVEAQRRRWTFYETITLNLL
Ga0315292_101130741	3300032143	Sediment	FRKKLQLQGAQKLRSEAYLHVRCNDEVEAQRSRWTFYETITYECFAS
Ga0315295_100602121	3300032156	Sediment	KKLRSAAHLHVRRNDEVEAQSRSERDRWTFYETFTLRPL
Ga0315283_106428431	3300032164	Sediment	RKKLQMQGAQKLRSEAHLQVRRNDEVEAQRRRWTFYETIRKGRQTTR
Ga0315276_105406902	3300032177	Sediment	RKKFQMPGAQKLRSEAHFKMHPNDEVAGQRRRWTFYETINIAISSTSNQE
Ga0315286_100419791	3300032342	Sediment	LPERWFRKKLQMQGAQKLRSEVHLRVRRNDEVAAQRRRGTFYETINICNLQ
Ga0315286_111730911	3300032342	Sediment	RWFRKKLQMQGAQKLRSEAQLQVRRKDEVTAQRRRWTFYETINY
Ga0315275_105964321	3300032401	Sediment	FRKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRRWTFYETIKISPFEKGG
Ga0315273_105336481	3300032516	Sediment	WFRKKLQMQGAQKLRSEAHLRVRRNDEVAAQRRRWTFYETIKTRFLQYLF
Ga0315273_107599881	3300032516	Sediment	FRKKLQLQGAQKLRSEAYLHVRCNDEVAAQRSRWTFYETIKITG
Ga0316604_100934942	3300033406	Soil	RKKSANRWFRKKLQMPGAQKLRSEAHLRVRRNDEVAAQSRSERNRWTFYETINN
Ga0316619_105925292	3300033414	Soil	FHPELGERWFRKKLRMPGAQKLRSEAHIYVRRSDEVAAQPRSERDRWTFYRTI
Ga0316601_1004149301	3300033419	Soil	KSAKRWFRKKFHMQGAQKLRSEAHLQMRRNDEVAAQRRRWTFYETIKFYYFIHSHLPI
Ga0326726_104034671	3300033433	Peat Soil	MQGAQNLTREVYLQARRNDEGEVQRSRWTFYETINVEIEIKDKT
Ga0316613_102058681	3300033434	Soil	WLRKKLQMQGAQKLRSEAHLQVRRNDEVAAQRRRWTFYEAIK
Ga0316613_102805701	3300033434	Soil	TRKKSVKRWFRKKLQLQGAQKLRSEARLQVRRNDEVAAHSRSARDRWTF
Ga0316613_105840183	3300033434	Soil	WFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQSRSERDRWTFCETSKSVKT
Ga0316630_103926741	3300033487	Soil	FRKRLQKQGAQKLRSEAHLQVRRNDEVAAQSRSERDRWTFYEPSNILCHAQNA
Ga0316621_105469471	3300033488	Soil	RKKLQMQGAQKLRSEAHLRVHRSNEVEAQRRRWTFCETIIIPWP
Ga0316621_110447921	3300033488	Soil	KDDLTKKFPVRWFCKKRQMQGAQKLRSEAYFQVCRNEEAEAQRRRWKFYEAVKKS
Ga0316628_1008103472	3300033513	Soil	RWFRKKLQMQGAQKLRSEAHFRVRRNDEVEAQRRRWTFYETLKE
Ga0316628_1015984752	3300033513	Soil	AKRWFRKKLQTQGAQKLRSEAHEHVRCNDEVEAQHSRWIFYETIKLPFQ
Ga0316616_1024686091	3300033521	Soil	WFRKKLQMQGAQKLRSEAHLQVRRNDEVAAQSPSERDRWTFCETSKSVKI
Ga0316617_1003817611	3300033557	Soil	LRKKLQMQGAQKLRSEAHLRVRRNDEVEAQRRRWTFYEVIIIINF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062882

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences