Metagenome / Metatranscriptome Family F062879

Basic Information
Family ID	F062879
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	68 residues
Representative Sequence	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Number of Associated Samples	82
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.23 %
% of genes near scaffold ends (potentially truncated)	33.08 %
% of genes from short scaffolds (< 2000 bps)	85.38 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (54.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (17.692 % of family members)
Environment Ontology (ENVO)	Unclassified (46.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (45.385 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.29% β-sheet: 0.00% Coil/Unstructured: 42.71%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF16561	AMPK1_CBM	6.92
PF06983	3-dmu-9_3-mt	2.31
PF07963	N_methyl	2.31
PF00873	ACR_tran	1.54
PF00583	Acetyltransf_1	1.54
PF06808	DctM	1.54
PF07929	PRiA4_ORF3	1.54
PF01261	AP_endonuc_2	1.54
PF02325	YGGT	1.54
PF00575	S1	1.54
PF10417	1-cysPrx_C	1.54
PF00403	HMA	0.77
PF00654	Voltage_CLC	0.77
PF13673	Acetyltransf_10	0.77
PF01649	Ribosomal_S20p	0.77
PF07883	Cupin_2	0.77
PF00857	Isochorismatase	0.77
PF00171	Aldedh	0.77
PF01906	YbjQ_1	0.77
PF16401	DUF5009	0.77
PF01679	Pmp3	0.77
PF01230	HIT	0.77
PF11799	IMS_C	0.77
PF14099	Polysacc_lyase	0.77
PF13302	Acetyltransf_3	0.77
PF13180	PDZ_2	0.77
PF04457	MJ1316	0.77
PF13646	HEAT_2	0.77
PF01738	DLH	0.77
PF00282	Pyridoxal_deC	0.77
PF01924	HypD	0.77
PF13489	Methyltransf_23	0.77
PF13847	Methyltransf_31	0.77
PF16798	DUF5069	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	2.31
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	2.31
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	1.54
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.77
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.77
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.77
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG1531	Uncharacterized conserved protein, UPF0248 family	Function unknown [S]	0.77
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.77
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.77
COG0409	Hydrogenase maturation factor HypD	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG0401	Membrane potential modulator PMP3/YqaE, plasma membrane proteolipid 3 (PMP3)/Esi3/RCI2/UPF0057 family	Energy production and conversion [C]	0.77
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.77
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	0.77
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.77
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.38 %
Unclassified	root	N/A	44.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.38 %
Unclassified	root	N/A	44.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.62 %
Unclassified	root	N/A	44.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	22.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.08 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.54 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	19.23 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.31 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	1.54 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.77 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.77 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.77 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	12.31 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.31 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.54 %
unclassified Candidatus Latescibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria	1.54 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.54 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.77 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	0.77 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.77 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.77 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.77 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.54 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.77 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.77 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.77 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.77 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.77 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.77 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	0.77 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.77 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.54 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.77 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.77 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.54 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.77 %
Orbiliomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes	0.77 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Microcystis elabens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	0.77 %
Orbiliales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes → Orbiliales	0.77 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Orbiliaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes → Orbiliales → Orbiliaceae	0.77 %
Microcystis elabens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	0.77 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Drechslerella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes → Orbiliales → Orbiliaceae → Drechslerella	0.77 %
Microcystis elabens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	0.77 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Drechslerella stenobrocha	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes → Orbiliales → Orbiliaceae → Drechslerella → Drechslerella stenobrocha	0.77 %
Microcystis elabens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	0.77 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.31 %
Phycisphaerae bacterium SM23_30	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	1.54 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1.54 %
Drechslerella stenobrocha 248	strain	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes → Orbiliales → Orbiliaceae → Drechslerella → Drechslerella stenobrocha → Drechslerella stenobrocha 248	0.77 %
Microcystis elabens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	0.77 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.77 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.77 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.77 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.77 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.77 %
Candidatus Omnitrophica bacterium 4484_70.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100072213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1004	Open in IMG/M
3300001213\|JGIcombinedJ13530_100726084	Not Available	838	Open in IMG/M
3300001213\|JGIcombinedJ13530_100957915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300001213\|JGIcombinedJ13530_102974347	Not Available	644	Open in IMG/M
3300001213\|JGIcombinedJ13530_103717768	Not Available	516	Open in IMG/M
3300001213\|JGIcombinedJ13530_108941883	Not Available	597	Open in IMG/M
3300003432\|JGI20214J51088_10857194	Not Available	592	Open in IMG/M
3300003541\|JGI20214J51650_10449441	Not Available	902	Open in IMG/M
3300005217\|Ga0069005_10206956	Not Available	553	Open in IMG/M
3300006224\|Ga0079037_101626436	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009091\|Ga0102851_12069710	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300009167\|Ga0113563_10609259	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300009167\|Ga0113563_11584507	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	774	Open in IMG/M
3300009175\|Ga0073936_10134880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1901	Open in IMG/M
3300009175\|Ga0073936_10294209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1059	Open in IMG/M
3300009502\|Ga0114951_10033509	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300009509\|Ga0123573_10067775	All Organisms → cellular organisms → Bacteria	3736	Open in IMG/M
3300009518\|Ga0116128_1189528	Not Available	579	Open in IMG/M
3300009525\|Ga0116220_10474232	Not Available	566	Open in IMG/M
3300009629\|Ga0116119_1187894	Not Available	515	Open in IMG/M
3300009631\|Ga0116115_1183854	Not Available	528	Open in IMG/M
3300009634\|Ga0116124_1086385	Not Available	894	Open in IMG/M
3300009637\|Ga0116118_1189163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300009639\|Ga0116122_1252548	Not Available	545	Open in IMG/M
3300009640\|Ga0116126_1011248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4238	Open in IMG/M
3300009640\|Ga0116126_1041306	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300009644\|Ga0116121_1061313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1178	Open in IMG/M
3300009764\|Ga0116134_1242385	Not Available	623	Open in IMG/M
3300009839\|Ga0116223_10421133	Not Available	784	Open in IMG/M
3300010339\|Ga0074046_10356968	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Orbiliomycetes → Orbiliales → Orbiliaceae → Drechslerella → Drechslerella stenobrocha → Drechslerella stenobrocha 248	889	Open in IMG/M
3300010341\|Ga0074045_11006790	Not Available	524	Open in IMG/M
3300010341\|Ga0074045_11079506	Not Available	501	Open in IMG/M
3300010343\|Ga0074044_10187931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1375	Open in IMG/M
3300010352\|Ga0116247_10378180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1113	Open in IMG/M
3300010379\|Ga0136449_100353588	All Organisms → cellular organisms → Bacteria → Acidobacteria	2639	Open in IMG/M
3300010379\|Ga0136449_102558010	Not Available	730	Open in IMG/M
3300010413\|Ga0136851_10159047	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300014155\|Ga0181524_10081328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1880	Open in IMG/M
3300014156\|Ga0181518_10016164	All Organisms → cellular organisms → Bacteria	5356	Open in IMG/M
3300014156\|Ga0181518_10079447	Not Available	1873	Open in IMG/M
3300014156\|Ga0181518_10488369	Not Available	584	Open in IMG/M
3300014159\|Ga0181530_10014006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6642	Open in IMG/M
3300014159\|Ga0181530_10260701	Not Available	925	Open in IMG/M
3300014162\|Ga0181538_10015682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5523	Open in IMG/M
3300014162\|Ga0181538_10236248	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300014162\|Ga0181538_10437697	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	693	Open in IMG/M
3300014162\|Ga0181538_10682087	Not Available	533	Open in IMG/M
3300014164\|Ga0181532_10514207	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	655	Open in IMG/M
3300014164\|Ga0181532_10727252	Not Available	534	Open in IMG/M
3300014165\|Ga0181523_10353698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300014490\|Ga0182010_10127475	Not Available	1296	Open in IMG/M
3300014491\|Ga0182014_10028638	Not Available	4380	Open in IMG/M
3300014491\|Ga0182014_10332714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300014491\|Ga0182014_10508698	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	589	Open in IMG/M
3300014491\|Ga0182014_10521590	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300014494\|Ga0182017_10688957	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium 4484_70.2	619	Open in IMG/M
3300014494\|Ga0182017_10929539	Not Available	523	Open in IMG/M
3300014496\|Ga0182011_10320519	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300014496\|Ga0182011_10631035	Not Available	680	Open in IMG/M
3300014496\|Ga0182011_11060836	Not Available	500	Open in IMG/M
3300014498\|Ga0182019_10770448	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300014501\|Ga0182024_12086742	Not Available	624	Open in IMG/M
3300014502\|Ga0182021_10349788	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300014502\|Ga0182021_10508395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1437	Open in IMG/M
3300014502\|Ga0182021_10649588	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300014502\|Ga0182021_11329618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300014502\|Ga0182021_12636184	Not Available	604	Open in IMG/M
3300014502\|Ga0182021_12970833	Not Available	568	Open in IMG/M
3300014502\|Ga0182021_13177858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	549	Open in IMG/M
3300014502\|Ga0182021_13412538	Not Available	529	Open in IMG/M
3300014839\|Ga0182027_11631096	Not Available	629	Open in IMG/M
3300014839\|Ga0182027_11747011	Not Available	603	Open in IMG/M
3300017929\|Ga0187849_1385864	Not Available	513	Open in IMG/M
3300017940\|Ga0187853_10388375	Not Available	619	Open in IMG/M
3300018002\|Ga0187868_1099825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1124	Open in IMG/M
3300018002\|Ga0187868_1315183	Not Available	513	Open in IMG/M
3300018008\|Ga0187888_1051526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	1894	Open in IMG/M
3300018008\|Ga0187888_1206793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	777	Open in IMG/M
3300018014\|Ga0187860_1042488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2366	Open in IMG/M
3300018016\|Ga0187880_1076462	Not Available	1705	Open in IMG/M
3300018017\|Ga0187872_10041334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2515	Open in IMG/M
3300018022\|Ga0187864_10322131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	684	Open in IMG/M
3300018022\|Ga0187864_10335552	Not Available	665	Open in IMG/M
3300018023\|Ga0187889_10444151	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300018025\|Ga0187885_10264907	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300018030\|Ga0187869_10178356	Not Available	1045	Open in IMG/M
3300018030\|Ga0187869_10257812	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300018030\|Ga0187869_10316132	Not Available	750	Open in IMG/M
3300018035\|Ga0187875_10050073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	2440	Open in IMG/M
3300018035\|Ga0187875_10336843	Not Available	812	Open in IMG/M
3300018037\|Ga0187883_10764381	Not Available	505	Open in IMG/M
3300018046\|Ga0187851_10357066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	840	Open in IMG/M
3300018057\|Ga0187858_10124537	Not Available	1737	Open in IMG/M
3300018057\|Ga0187858_10250758	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300019082\|Ga0187852_1040951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2192	Open in IMG/M
3300019785\|Ga0182022_1332899	Not Available	1369	Open in IMG/M
3300020228\|Ga0194040_1170822	Not Available	643	Open in IMG/M
3300021070\|Ga0194056_10072307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1268	Open in IMG/M
3300021602\|Ga0194060_10087804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1731	Open in IMG/M
3300022185\|Ga0079039_1467784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300023088\|Ga0224555_1099681	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300023090\|Ga0224558_1011439	Not Available	5303	Open in IMG/M
3300023090\|Ga0224558_1099298	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300025500\|Ga0208686_1115316	Not Available	561	Open in IMG/M
3300027896\|Ga0209777_10229209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1474	Open in IMG/M
3300029817\|Ga0247275_1038474	Not Available	1399	Open in IMG/M
3300031834\|Ga0315290_10498148	All Organisms → cellular organisms → Bacteria → FCB group	1063	Open in IMG/M
3300031834\|Ga0315290_10594339	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300031902\|Ga0302322_101818132	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031902\|Ga0302322_103456038	Not Available	541	Open in IMG/M
3300032160\|Ga0311301_10656341	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300032160\|Ga0311301_12157229	Not Available	642	Open in IMG/M
3300032256\|Ga0315271_10797163	All Organisms → cellular organisms → Bacteria → FCB group	814	Open in IMG/M
3300032342\|Ga0315286_11231952	Not Available	730	Open in IMG/M
3300032805\|Ga0335078_10448577	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300032829\|Ga0335070_10512283	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300032893\|Ga0335069_10746380	Not Available	1108	Open in IMG/M
3300032893\|Ga0335069_11866947	Not Available	636	Open in IMG/M
3300032897\|Ga0335071_11438042	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300033402\|Ga0326728_10003812	All Organisms → cellular organisms → Bacteria	45884	Open in IMG/M
3300033402\|Ga0326728_10005230	All Organisms → cellular organisms → Bacteria	36979	Open in IMG/M
3300033402\|Ga0326728_10066574	All Organisms → cellular organisms → Bacteria	4870	Open in IMG/M
3300033402\|Ga0326728_10150392	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300033402\|Ga0326728_10411086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1150	Open in IMG/M
3300033402\|Ga0326728_10440169	Not Available	1090	Open in IMG/M
3300033482\|Ga0316627_101663713	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300033483\|Ga0316629_10927795	Not Available	679	Open in IMG/M
3300033521\|Ga0316616_104186009	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM23_30	543	Open in IMG/M
3300033819\|Ga0334816_007136	Not Available	2252	Open in IMG/M
3300034128\|Ga0370490_0200506	Not Available	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.23%
Engineered	Engineered	0.77%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	56.15%
Terrestrial	Environmental → Terrestrial	43.08%
Wastewater	Engineered → Wastewater	0.77%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.46%
Soil	Environmental → Terrestrial → Soil	33.85%
Peat	Environmental → Terrestrial → Peat	9.23%
Marine	Environmental → Aquatic → Marine	6.15%
Sediment	Environmental → Aquatic → Sediment	1.54%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.77%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	40.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.23%
Lake	Environmental → Aquatic → Freshwater → Lake	7.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.54%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.77%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	27.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	17.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.23%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	6.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.38%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.62%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.77%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.69%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	13.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.46%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	6.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.62%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.62%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.08%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.08%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.08%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.08%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.31%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.54%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.54%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.54%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300005217	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020228	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-10m	Environmental	Open in IMG/M
3300021070	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062879

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1000722131	3300001213	Wetland	MNAPQKQSSPSRAASENPASKAQPEQGLPATPVQKVFIVVLGLYILSLIWLTLSHHWYGVLPSWLDPH*
JGIcombinedJ13530_1007260842	3300001213	Wetland	MKAPQKQSSPGRATSETQSAEAQPEQGLPATPVQKVFIVVLGLYVLSLLWLTLSHHWYGVLPKWLDPH*
JGIcombinedJ13530_1009579151	3300001213	Wetland	MNAPQKQSSLSHAAFANQPAAPQPEQGQPATLVQKIFIAGLYLYVLSLVWLTLSHHWYGVLPQWLDPH*
JGIcombinedJ13530_1029743472	3300001213	Wetland	QMNAPQKQSSPSRAASESQSAKALPEQGLPATLGQKIFVVVLFLYVLSLVWLTLSHYWYGVLPNWLDPHEEKPSVTAPK*
JGIcombinedJ13530_1037177681	3300001213	Wetland	MNAPQKQSSPSRAAPEKQAANAQLENDQPATLVQKIFIVGLYLYILSLVWLTLSHHWYGVLPKWL
JGIcombinedJ13530_1089418832	3300001213	Wetland	MNAPQKQSSPRRAASENHSAREQPEQGLPATLGQKIFIFLLFLYVLSLLWLTLSHHWYGVLPKWLARISSGVDDNSDE
JGI20214J51088_108571942	3300003432	Wetland	REATPEQDCQHMSASEKQSTPGRVASDKQPAKGQPEQEGPATLGQKIFITVLFLYVLSLVWLTLSHHWYGVLPKWLDPH*
JGI20214J51650_104494411	3300003541	Wetland	MNAPQKQSSPSRAAPEKQAANAQLENDQPATLVQKIFIVGLYLYILSLVWLTLSHHWYGVLPKWLDPH*
Ga0069005_102069561	3300005217	Natural And Restored Wetlands	MKAPQKQSSPGPAASENQPAKAQPENDQPATLVQKIFIVGLYLYVLSLLWLTLSHHWYGVLPKWLDPHEQKSSSS*
Ga0079037_1016264362	3300006224	Freshwater Wetlands	MNASEKQSTKPKPEQEAPATLGQKIFIAVLYLYILSLVWLTLSHHWYGVLPKWLDPH*
Ga0102851_120697101	3300009091	Freshwater Wetlands	MNASEKQSTKPKPAQEAPATLGQKIFIAVLYLYILSLVWLTLSHHWYGVLPKWLDPH*
Ga0113563_106092592	3300009167	Freshwater Wetlands	MKASEKQAAPGSAASEKQPATTQPERDVPATLGQKIFIVVLYLYILSLVWLTLSHHWYGVLPKWLDPH*
Ga0113563_115845072	3300009167	Freshwater Wetlands	MKASEKQTAPGGAASEKQSAQTQPEQDGPATLGQKIFIVVLCLYVLSLVWLTLSHHWYGVLPKWLDPYKPDAQAATT
Ga0073936_101348801	3300009175	Freshwater Lake Hypolimnion	MKAPQKQPSPGRATSENQSAEAQPEQGLPATPVQKVFIVVLGLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0073936_102942092	3300009175	Freshwater Lake Hypolimnion	MKAPQKQSSPGRATSENQSAEAQPEQGLPATPVQKVFIVVLGLYVLSLLWLTLSHHWYGVLPKWLDPH*
Ga0114951_100335095	3300009502	Freshwater	MNAPQQQSSLSSAASENQPAKAQPEQLLPATLVQKIFIAGLYLYVLSLVWLTLSHYWYGVLPQWLDPH*
Ga0123573_100677752	3300009509	Mangrove Sediment	LPRADTAAKSPAMNAPQKQFSPNRAASERQPGKAQPQQESSATLGQKIFLVVLCLYLLSLIWLVLSHHWYGVLPQWLDPH*
Ga0116128_11895281	3300009518	Peatland	MNALQKQSSLSRAESENQPAKAQPEQKYPATLVQKIFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0116220_104742321	3300009525	Peatlands Soil	MNAPQKPSAQSRAASGGQSDKGRPEQGLPATLGQKIFIVGLYLYALSLVWLTLSHYWYGVLPKWLDPH*
Ga0116119_11878941	3300009629	Peatland	MNAQQKQTSLSRAASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPH*
Ga0116115_11838541	3300009631	Peatland	MNAQQKQTSLSRAASEEQFTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHHWYGVLPKWLDPH*
Ga0116124_10863851	3300009634	Peatland	MNAQQKQTSLSRAVSEDQSTKAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHNWYGVLPKWLDPH*
Ga0116118_11891633	3300009637	Peatland	MNAPQKQSPLSHAAFANQPAGAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSH
Ga0116122_12525481	3300009639	Peatland	MNAQQKQTSLSRAASEDQSTKAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHHWYGVLPKWLDPH*
Ga0116126_10112483	3300009640	Peatland	MNAPQKQSPLSHAAFANQPAGAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSHHWYGVLPQWLDPH*
Ga0116126_10413063	3300009640	Peatland	MNALQKQSSLSRAESENQPAKAQPEQKYPATLVQKIFITGLYLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0116121_10613131	3300009644	Peatland	MNAQQKQTTLSRAASEEQSTKAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0116134_12423852	3300009764	Peatland	MNALQKQSSLSRAESENQPAKAQPEQKYPATLVQKIFITGLYLYVLSLVWLTLSHHWYGVLPKW
Ga0116223_104211332	3300009839	Peatlands Soil	LPHANSGANFLQMNAPQKPSAQSRAASGGQSDKGRPEQGLPATLGQKIFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH*
Ga0074046_103569682	3300010339	Bog Forest Soil	MNAPQKQASESRAASEDQSNEAQAEQKLPATLVQKLFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH*
Ga0074045_110067902	3300010341	Bog Forest Soil	MNAPQKQASESRAASEDQSNEAQAEQKLPATLVQKLFIVGLYLYVLSLVWLTLSHYWYGVLPKW
Ga0074045_110795061	3300010341	Bog Forest Soil	MNAPQKQSSLSHAASANHPAAAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSHHWYGLLPKWLDPH*
Ga0074044_101879312	3300010343	Bog Forest Soil	MNAPQKQASESRAASEDQSNEAQAEQKLPATLVQKLFIVGLYLYVLSLVWLTLSHYWYGVLPKWL
Ga0116247_103781801	3300010352	Anaerobic Digestor Sludge	AESSCRAPPAVQDLQSMNALQKQASQNGAAPEQGRPATLGQKIFIAVLYLYVLSLVWLTLSHHWYGVLPNWLDPH*
Ga0136449_1003535883	3300010379	Peatlands Soil	LPHANSGANFLQMNAPQKPSAQSRAASGGQSDKGRPEQGLPATLGQKIFIVGLYLYALSLVWLTLSHYWYGVLPKWLDPH*
Ga0136449_1025580101	3300010379	Peatlands Soil	RPSTPAQILLQMNAPQKQSAPSRAGSKDQSTDAQPEQGLPATPVQKLFIAGLYLYLLSLVWLTSSHYWYGVLPKWLDPH*
Ga0136851_101590472	3300010413	Mangrove Sediment	MNAPQKQFSPNRAASERQPGKAQPQQESSATLGQKIFLVVLCLYLLSLIWLVLSHHWYGVLPQWLDPH*
Ga0181524_100813281	3300014155	Bog	TPARNLSRMNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHYWYGVLPIWLDPH*
Ga0181518_100161645	3300014156	Bog	MNEPQKQSSLSRTASENQPAKAQPEQEHPATLGQKIFIVGLYLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0181518_100794471	3300014156	Bog	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGVLPIWLDPH*
Ga0181518_104883691	3300014156	Bog	MNAQQEQTSLSRAASEEQSTRAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHNWYGV
Ga0181530_1001400611	3300014159	Bog	MNEPQKQSSLSRTASENQPAKAQPEQEHPATLGQKVFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH*
Ga0181530_102607011	3300014159	Bog	APTPAQNLWQMNAQQKQTSLSRAASEEQCTKAQPEQKLPATLAQKLFIAGLYLYLLSLVWLTLSHNWYGVLPKWLDPH*
Ga0181538_100156821	3300014162	Bog	AASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPH*
Ga0181538_102362481	3300014162	Bog	MNAQQEQTSLSRAASEEQSTRAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHNWYGVLPKWLDPH*
Ga0181538_104376972	3300014162	Bog	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHYWYGVLPIWLDPH*
Ga0181538_106820871	3300014162	Bog	MNAQQKQTSLSRAASEEQCTKAQPEQKLPATLAQKLFIAGLYLYLLSLVWLTLSHNWYGVLPKWLDPH*
Ga0181532_105142071	3300014164	Bog	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHYWYGVLPIWLDPHKQRSR*
Ga0181532_107272521	3300014164	Bog	HAASEERPTKAQPKQELPATLVQKLFIAGLYLYLLSLLWLTLSHNWYGVLPKWLDPH*
Ga0181523_103536981	3300014165	Bog	MNAQQKQTSLSRAASEEQCTKAQPEQKLPATLAQKLFIAGLYLYLLSLVWLTLSHNWYG
Ga0182010_101274753	3300014490	Fen	MNAQQKQTSLSRAASEEQSTRAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGV
Ga0182014_100286387	3300014491	Bog	MNAQQKQTSVSRAASEEQSTKAAPEQELPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGMLPNWLDPH*
Ga0182014_103327141	3300014491	Bog	MKAPQKQSSPGHAASENQPAKAQPENDQPATLVQKIFIVGLYLYVLSLLWLTLSHHWYGVLPKWLDPHEQKSSSS*
Ga0182014_105086982	3300014491	Bog	MNAEKKQTSLSRASSEDQSTNAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHYWYGVLPKWLDPL*
Ga0182014_105215903	3300014491	Bog	MNAQQKQTSVSRAASQEQSPKAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHYWYGVLPKWLDPH*
Ga0182017_106889571	3300014494	Fen	MNAQQKQTSLSRAASEEQSTRAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGVLPKWLDPH*
Ga0182017_109295391	3300014494	Fen	MNGPKKQSSQSRAASESQPGQAPPEQDQPATFAQKIFIAGLYLYLLSLVWLTLSHHWYGVLPQWLDPH*
Ga0182011_103205191	3300014496	Fen	QMNAPQKQSSVSRAASENQPAQAQPEHDQPATLGVKIFIVGLYLYVLSLLWLTLSHHWYGVLPKWLDPH*
Ga0182011_106310352	3300014496	Fen	MNAPQKQSSLSRATSENLSATAQPEQGQPATLVQKIFITGLYIYLLSLLWLTLSHHWYGVLPKWLD
Ga0182011_110608361	3300014496	Fen	MNAQQKQTSLSRAASEEQSAKAQPEQQLPATFVQKLFIAGLYLYLLSLVWLTLSHNWYGVLPKWLDPH*
Ga0182019_107704482	3300014498	Fen	MSAPQTQSAKEQPEHDQPATLVQKIFIVGLYLYILSLVWLTLSHHWYGVLPNWLDPH*
Ga0182024_120867422	3300014501	Permafrost	MIKEHTAAGLNITREQSHAASENQPAKAQSKQEHPATFGQKILIAGLYLYLLSLVWLALSHYWYGVLPKWLDPH*
Ga0182021_103497882	3300014502	Fen	MNAPQKQSSGSQAVSGNQPAKAQPEHDQPATLGVKIFIVGLYLYVLSLVWLTLSHHWYGVLPKWLDPHEERPSVTAPK*
Ga0182021_105083952	3300014502	Fen	MKAPQKQSSPARAASENQPAVAQPENDQPATLVQKIFIVVLYLYVLSLLWLTLSHHWYGVLPKWLDPHEQKSSSS*
Ga0182021_106495882	3300014502	Fen	MNAPEKQSAKAQPEQGAPATLGQKIFIIALYLYILSLVWLTLSHHWYGVLPKWLDPH*
Ga0182021_113296181	3300014502	Fen	MKAPQKQSAVSRAASEAQPGKAQPERDQPATLVQKIFIVGLYLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0182021_126361841	3300014502	Fen	MNAPQKQSTLSHAASANQPATAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSHHWYAVLPKWLDPH*
Ga0182021_129708331	3300014502	Fen	LGRATSENLSDTAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSHHWYGVLPKWLDPH*
Ga0182021_131778582	3300014502	Fen	MNAPQKQSSQSRAAAENQPGKAQPEQDQPATLVQKIFITALYLYLLGLVWLTLSHHWYGVLPS
Ga0182021_134125381	3300014502	Fen	MFLIQIIYWQPLQNLQQMNAPKMQSSPSRAASGNQPGQAQFEQDQPATLAQKIFVAGLCLYLLALVWLTLSHHWYGVLPTWLDPH*
Ga0182027_116310962	3300014839	Fen	MNAPQKQSSLSREASENQPAKAQTEQEHPATLGQKLFIAGLYLYVPSLVWLALSHHWYGVLPKWLDPH*
Ga0182027_117470112	3300014839	Fen	SHAASANQPASAQPEQGQPATLLQKIFITGLYLYVLSLVWLTLSHHWYGVLPKWLDPH*
Ga0187849_13858642	3300017929	Peatland	MNAQQKQTSLSRASSEDQSTNAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHYWYGVLPKWLDPL
Ga0187853_103883752	3300017940	Peatland	MNAQQKQTALSRAVSEDQSTKAQPEQQLPATLVQKLFIAGLYLYVLSLVWLTLSHYWYGVLPIWLDPH
Ga0187868_10998252	3300018002	Peatland	MNALQKQSSLSRAESENQPAKAQPEQKYPATLVQKIFITGLYLYVLSLVWLTLS
Ga0187868_13151831	3300018002	Peatland	AQQKQTSLSRAASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPH
Ga0187888_10515262	3300018008	Peatland	MNAQQKQTSLSRAASEDQSTKAQPAQQLPATFVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPH
Ga0187888_12067932	3300018008	Peatland	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHHWYGVLPKWLD
Ga0187860_10424882	3300018014	Peatland	MNAPQKQSPLSHAAFANQPAGAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSHHWYGVLPQWLDPH
Ga0187880_10764622	3300018016	Peatland	MNALQKQSSLSRAESENQPAKAQPEQKYPATLVQKIFITGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0187872_100413343	3300018017	Peatland	MNAQQKQTSLSRAASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLSVSHHWYGVLPKWLDPH
Ga0187864_103221311	3300018022	Peatland	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGVLPKWLDPH
Ga0187864_103355522	3300018022	Peatland	MNAQQEQTSLSRAASEEQSTKAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0187889_104441511	3300018023	Peatland	MNAQQKQTSLSRAASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLTLSHNWYGVLPKWLDPH
Ga0187885_102649072	3300018025	Peatland	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLDLLSLVWLTLSHNWYGVLPIWLDPH
Ga0187869_101783561	3300018030	Peatland	KSTCRTSTPARNLSRMNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGVLPIWLDPH
Ga0187869_102578122	3300018030	Peatland	RAESENQPAKAQPEQKYPATLVQKIFITGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0187869_103161321	3300018030	Peatland	MNAQQKQTTLSRAASEEQSTKAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0187875_100500734	3300018035	Peatland	LSRAASEDQSTKAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHNWYGVLPKWLDPH
Ga0187875_103368432	3300018035	Peatland	MNAQQKQTALSRAASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPH
Ga0187883_107643811	3300018037	Peatland	MNAQQEQTSLSRAASEDQSTKAQPEQQLPATFVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPH
Ga0187851_103570661	3300018046	Peatland	PSRAASENQPANAQPENDQPATLVQKIFIVGLYLYVLSLLWLTLSHHWYGVLPKWLDPHEQKST
Ga0187858_101245372	3300018057	Peatland	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLAQKLFIAGLYLYLLSLVWLTLSHNWYGVLPIWLDPH
Ga0187858_102507581	3300018057	Peatland	LSRAASEEQSTRAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHNWYGVLPKWLDPH
Ga0187852_10409511	3300019082	Peatland	KSQQMNALQKQSSLSRAESENQPAKAQPEQKYPATLVQKIFITGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0182022_13328992	3300019785	Fen	MNAPQKPSSPSRAASEDQSNKAQAEQELPATLVQKLFIVGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0194040_11708221	3300020228	Anoxic Zone Freshwater	MKAPQKQSSPGRATSENQSAEAQPEQGLPATPVQKVFIVVLGLYVLSLLWLTLSHHWYGVLPKWLDPH
Ga0194056_100723072	3300021070	Anoxic Zone Freshwater	MKAPQKQPSPGRATSENQSAEAQPEQGLPATPVQKVFIVVLGLYVLSLLWLTLSHHWYGVLPKWLDPH
Ga0194060_100878042	3300021602	Anoxic Zone Freshwater	MNPPQMQSSLSRAASENKPAKAQFEQEHPARLAQKIFIAGLYLYSLALVWLTLSHHWYGVLPSWLDPH
Ga0079039_14677841	3300022185	Freshwater Wetlands	MSRATSASQPVDTQPEQGLPATLVQKIFITGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0224555_10996811	3300023088	Soil	MNAEKKQTSLSRASSEDQSTNAQPEQELPATLVQKLFIAGLYLYVLSLVWLTLSHYWYGVLPKWLDPL
Ga0224558_10114398	3300023090	Soil	MLAITLSLTHFRLKVKSTCRTPTPARNLSQMNAQQKQTSVSRAASEEQSTKAAPEQELPATLVQKLFIAGLYLYLLSLVWLTLSHNWYGMLPNWLDPH
Ga0224558_10992982	3300023090	Soil	MNAQQKQTSLRRSASEEQSTKAQPEQGLPATLGQKIFIVGLYLYVLSLVWLALSHNWYGVLPRWLDPH
Ga0208686_11153162	3300025500	Peatland	MNAQQKQTALSRAASEDQSTKAQPEQQLPATLVQKLFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0209777_102292092	3300027896	Freshwater Lake Sediment	MNAPQKQSSLSRATSENLSATAQPEQGQPATLVQKIFIAGLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0247275_10384742	3300029817	Soil	MNAQQEQTSLSRAASEEQSTRAQPEQQLPATLVQKLFIAGVYLYLLSLVWLTLSHYWYGVLPIWLDPHKQRSR
Ga0315290_104981482	3300031834	Sediment	MNAPQKQSPQSRAGSENPSAKAQPEQGLPATLGQKIFVAVLCLYVLSLIWLTLSHHWYGLLPKWLDPH
Ga0315290_105943391	3300031834	Sediment	MNAPQKQSSPSRAASESQSPAAQPEQGLPATLGQKRFIVVLFLYVLSLLWLTLSHHWYGVLPKWLDPHEERQSLTAP
Ga0302322_1018181322	3300031902	Fen	KAPQKQPSPGRATSENQSAEAQPEQGLPATPVQKVFIVVLGLYVLSLLWLTLSHHWYGVLPKWLDPH
Ga0302322_1034560381	3300031902	Fen	PAPENPCRAPAAVQNPQHMNAPQKQASQNRAAPESQASKSPPEQGLPATLGQKIFITGLYLYVLSLVWLTLSHYWYGILPKWLDPH
Ga0311301_106563412	3300032160	Peatlands Soil	MNAPQKPSAQSRAASGGQSDKGRPEQGLPATLGQKIFIVGLYLYALSLVWLTLSHYWYGVLPKWLDPH
Ga0311301_121572292	3300032160	Peatlands Soil	ERSKSTCRAPMPAQNLWQMNAQQKQTSLSRAASEEQCTEAQPEQKLHATLGQKLFIAGLYLYLLSLVWLTLSHHWYGVLPQWLDPH
Ga0315271_107971631	3300032256	Sediment	MNAPQKQSPQSRAGSENPSAKAQPEQGLPATLGQKIFVAVLCLYVLSLIWLTLSHHWYGLLPKWLD
Ga0315286_112319522	3300032342	Sediment	MNAPQKQSSPSGAASESQSAKAQPEQGLPATLGQKIFIVVLFLYVLSLVWLTLSHNWYGVLPKWLDPHEERQSLTAPK
Ga0335078_104485771	3300032805	Soil	PQKPSAQSRAASEDQANKAQPDQELSATLGQKIFIVVLYLYLLSLVWLTLSHYWYGVLPKWLDPH
Ga0335070_105122832	3300032829	Soil	MNAPQKQSAPSPTAPDNQAAKTQPEEGLPATLGQKIFVTLLFLYVLSLVWLTLSHYWYGVLPAWLDPH
Ga0335069_107463801	3300032893	Soil	MNAPQKQTSPNRTASEDPSKKTQPGQERPATLVQKLFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH
Ga0335069_118669471	3300032893	Soil	MNAQQKQTSVSRAASEEQSTKAQPEQVLPATLVQKLFIAGLYLYLLSLVWLTLSHHWYGVLPKWLDPH
Ga0335071_114380422	3300032897	Soil	SRDAPEGRSDNAQPEQGLPATPAQKLFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH
Ga0326728_1000381246	3300033402	Peat Soil	MNAPQKQASESRAASEDQSNEAQAEQKLPATLVQKLFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH
Ga0326728_1000523014	3300033402	Peat Soil	MNAQQKQTPLSRAASEERPTKAQPKQELPATLVQKLFIAGLYLYLLSLLWLTLSHNWYGVLPKWLDPH
Ga0326728_100665745	3300033402	Peat Soil	MNAPQKQASESRAASEDQSNKAQAEQNLPATLVQKLFIVGLYLYLLSLVWLTLSHHWYGVLPKWLDPHQERSR
Ga0326728_101503922	3300033402	Peat Soil	MNAPQQQASESRAASEDQSNEAQAEQKLPATLVQKLIIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH
Ga0326728_104110861	3300033402	Peat Soil	MNAPQKQSPLSHAAFANQPAAAQPEQGQPATLVQKIFITGLYLYLLSLVWLTLSHHWYGVLPKWLDPH
Ga0326728_104401691	3300033402	Peat Soil	MNAPQKQSSPSRAAAEDKSTKGQPEQGLPATLGQKIFITVLYLYVLSLVWLTLSHHWYGVLPKWLDPH
Ga0316627_1016637132	3300033482	Soil	MNASEKQSTKPKPEQEAPATLGQKIFIAVLYLYILSLVWLTLSHHWYGVLPKWLDPH
Ga0316629_109277951	3300033483	Soil	MNASEKQSTKSKPEQEAPATLGQKIFIAVLYLYILSLVWLTLSHHWYGVLPKWLDPH
Ga0316616_1041860092	3300033521	Soil	MNASEKQSTKPKPAQEAPATLGQKIFIAVLYLYILSLVWLTLSHHWYGVLPKWLDPH
Ga0334816_007136_2018_2224	3300033819	Soil	MNAPQKQSAVSRATSQAQPGKAQPERDQPATLVQKIFIVGLYLYVLSLVWLTLSHYWYGVLPKWLDPH
Ga0370490_0200506_176_382	3300034128	Untreated Peat Soil	MNAPQKQASHSRAASEDQPAKAPPEEGLPATLGQKLFIAALYLYVLSLVWLTLSHHWYGVLPKWLDPQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign