Metagenome / Metatranscriptome Family F062870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062870
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	51 residues
Representative Sequence	METVTVAANRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRSRTLPRVVKN
Number of Associated Samples	111
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.42 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	85.38 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.00% β-sheet: 0.00% Coil/Unstructured: 45.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00202	Aminotran_3	46.92
PF05899	Cupin_3	28.46
PF00691	OmpA	6.92
PF00171	Aldedh	1.54
PF00654	Voltage_CLC	0.77
PF00873	ACR_tran	0.77
PF04972	BON	0.77
PF13560	HTH_31	0.77
PF00082	Peptidase_S8	0.77
PF13493	DUF4118	0.77
PF16576	HlyD_D23	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.54
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.54
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.54
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.08 %
Unclassified	root	N/A	23.08 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.77 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.77 %
Unclassified	root	N/A	23.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.38 %
Aplysina aerophoba bacterial symbiont clone AANRPS	species	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	0.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	16.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.31 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	1.54 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.54 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %
Aplysina aerophoba bacterial symbiont clone AANRPS	species	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	16.92 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.08 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.54 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	1.54 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.77 %
Aplysina aerophoba bacterial symbiont clone AANRPS	species	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	16.92 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.08 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	1.54 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	1.54 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.77 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.77 %
Aplysina aerophoba bacterial symbiont clone AANRPS	species	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	16.92 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.08 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.54 %
Aeromonas salmonicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	1.54 %
Paraburkholderia piptadeniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia piptadeniae	0.77 %
Pseudorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Pseudorhizobium	0.77 %
Aplysina aerophoba bacterial symbiont clone AANRPS	species	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.08 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	16.92 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.08 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.54 %
Aeromonas salmonicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	1.54 %
Pseudorhizobium banfieldiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Pseudorhizobium → Pseudorhizobium banfieldiae	0.77 %
Paraburkholderia piptadeniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia piptadeniae	0.77 %
Aplysina aerophoba bacterial symbiont clone AANRPS	species	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01BMUM4	Not Available	515	Open in IMG/M
3300003323\|rootH1_10043660	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300003505\|JGIcombinedJ51221_10047593	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300004101\|Ga0058896_1338478	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300004635\|Ga0062388_100634319	Not Available	985	Open in IMG/M
3300004799\|Ga0058863_10723937	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005167\|Ga0066672_10621000	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300005174\|Ga0066680_10277483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1068	Open in IMG/M
3300005181\|Ga0066678_10180768	Not Available	1337	Open in IMG/M
3300005187\|Ga0066675_10668079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	781	Open in IMG/M
3300005260\|Ga0074072_1006106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5979	Open in IMG/M
3300005329\|Ga0070683_100003181	All Organisms → cellular organisms → Bacteria → Proteobacteria	13246	Open in IMG/M
3300005329\|Ga0070683_101483828	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300005337\|Ga0070682_100945342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	711	Open in IMG/M
3300005367\|Ga0070667_100453295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1172	Open in IMG/M
3300005434\|Ga0070709_10093080	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300005435\|Ga0070714_101431471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	675	Open in IMG/M
3300005435\|Ga0070714_102240670	Not Available	532	Open in IMG/M
3300005436\|Ga0070713_100913404	Not Available	845	Open in IMG/M
3300005458\|Ga0070681_11574908	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300005529\|Ga0070741_10022937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	9523	Open in IMG/M
3300005529\|Ga0070741_10211866	All Organisms → cellular organisms → Bacteria → environmental samples → Aplysina aerophoba bacterial symbiont clone AANRPS	1876	Open in IMG/M
3300005538\|Ga0070731_11194115	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005548\|Ga0070665_100000543	All Organisms → cellular organisms → Bacteria → Proteobacteria	52995	Open in IMG/M
3300005616\|Ga0068852_101094820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	817	Open in IMG/M
3300005841\|Ga0068863_101788108	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300005842\|Ga0068858_102579321	Not Available	502	Open in IMG/M
3300006237\|Ga0097621_100100592	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300006755\|Ga0079222_12269310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300006797\|Ga0066659_10008641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5328	Open in IMG/M
3300006893\|Ga0073928_10332563	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300006954\|Ga0079219_11738645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	580	Open in IMG/M
3300009038\|Ga0099829_11295422	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300009093\|Ga0105240_10021567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	8566	Open in IMG/M
3300009093\|Ga0105240_10047475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5433	Open in IMG/M
3300009093\|Ga0105240_10820530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1006	Open in IMG/M
3300009101\|Ga0105247_11173683	Not Available	610	Open in IMG/M
3300009176\|Ga0105242_11532953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	698	Open in IMG/M
3300009545\|Ga0105237_12790582	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300009551\|Ga0105238_10962349	Not Available	874	Open in IMG/M
3300010371\|Ga0134125_10249677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1972	Open in IMG/M
3300010371\|Ga0134125_11249478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	811	Open in IMG/M
3300010373\|Ga0134128_10063207	All Organisms → cellular organisms → Bacteria → Proteobacteria	4260	Open in IMG/M
3300010375\|Ga0105239_11826947	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010376\|Ga0126381_105049192	Not Available	506	Open in IMG/M
3300010379\|Ga0136449_101059987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1296	Open in IMG/M
3300010396\|Ga0134126_10000439	All Organisms → cellular organisms → Bacteria → Proteobacteria	53625	Open in IMG/M
3300010396\|Ga0134126_11127526	Not Available	874	Open in IMG/M
3300011120\|Ga0150983_13261219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	573	Open in IMG/M
3300011120\|Ga0150983_13488176	Not Available	845	Open in IMG/M
3300011120\|Ga0150983_14160114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300012205\|Ga0137362_11452891	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012212\|Ga0150985_117549529	Not Available	511	Open in IMG/M
3300012683\|Ga0137398_10389559	Not Available	948	Open in IMG/M
3300012929\|Ga0137404_10263254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1484	Open in IMG/M
3300013296\|Ga0157374_12863328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	510	Open in IMG/M
3300013307\|Ga0157372_10739081	Not Available	1144	Open in IMG/M
3300014168\|Ga0181534_10395254	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300014501\|Ga0182024_10966052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300014658\|Ga0181519_10595481	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300015242\|Ga0137412_10824523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	679	Open in IMG/M
3300018088\|Ga0187771_10399594	Not Available	1159	Open in IMG/M
3300018431\|Ga0066655_11330246	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300019268\|Ga0181514_1272924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	516	Open in IMG/M
3300019889\|Ga0193743_1088055	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300020140\|Ga0179590_1097660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	790	Open in IMG/M
3300020170\|Ga0179594_10097210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1055	Open in IMG/M
3300020580\|Ga0210403_10209146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Pseudorhizobium → Pseudorhizobium banfieldiae	1601	Open in IMG/M
3300020582\|Ga0210395_10935640	Not Available	643	Open in IMG/M
3300020583\|Ga0210401_11084562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	659	Open in IMG/M
3300021170\|Ga0210400_10134768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1980	Open in IMG/M
3300021170\|Ga0210400_10383996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1158	Open in IMG/M
3300021181\|Ga0210388_10084741	All Organisms → cellular organisms → Bacteria → Proteobacteria	2694	Open in IMG/M
3300021401\|Ga0210393_11554138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300021403\|Ga0210397_11506572	Not Available	522	Open in IMG/M
3300021405\|Ga0210387_11222261	Not Available	652	Open in IMG/M
3300021406\|Ga0210386_10823580	Not Available	797	Open in IMG/M
3300021406\|Ga0210386_11704314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	521	Open in IMG/M
3300021407\|Ga0210383_11104103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300021407\|Ga0210383_11326947	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300021475\|Ga0210392_10622735	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300021477\|Ga0210398_11274936	Not Available	578	Open in IMG/M
3300022467\|Ga0224712_10479407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	600	Open in IMG/M
3300022511\|Ga0242651_1025866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	639	Open in IMG/M
3300022532\|Ga0242655_10039063	Not Available	1123	Open in IMG/M
3300022714\|Ga0242671_1089599	Not Available	571	Open in IMG/M
3300022726\|Ga0242654_10106964	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300025898\|Ga0207692_10158818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1301	Open in IMG/M
3300025912\|Ga0207707_10374016	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300025913\|Ga0207695_10051308	All Organisms → cellular organisms → Bacteria → Proteobacteria	4332	Open in IMG/M
3300025913\|Ga0207695_10061542	All Organisms → cellular organisms → Bacteria → Proteobacteria	3879	Open in IMG/M
3300025913\|Ga0207695_10575700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1007	Open in IMG/M
3300025921\|Ga0207652_11539035	Not Available	569	Open in IMG/M
3300025924\|Ga0207694_10591798	Not Available	933	Open in IMG/M
3300025944\|Ga0207661_11234841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	687	Open in IMG/M
3300025949\|Ga0207667_11329294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	694	Open in IMG/M
3300026078\|Ga0207702_12316384	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300026088\|Ga0207641_11375198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	707	Open in IMG/M
3300026142\|Ga0207698_11661694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300028379\|Ga0268266_10142619	All Organisms → cellular organisms → Bacteria → Proteobacteria	2151	Open in IMG/M
3300028536\|Ga0137415_10068030	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300028573\|Ga0265334_10053702	Not Available	1538	Open in IMG/M
3300028573\|Ga0265334_10278569	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300028789\|Ga0302232_10511044	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300028800\|Ga0265338_10518959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	837	Open in IMG/M
3300028879\|Ga0302229_10396021	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300030738\|Ga0265462_12420278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300030740\|Ga0265460_10848707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	812	Open in IMG/M
3300030743\|Ga0265461_13342940	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300030841\|Ga0075384_11454281	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300030848\|Ga0075388_10893796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	580	Open in IMG/M
3300030906\|Ga0302314_11575433	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300030937\|Ga0138302_1138437	Not Available	542	Open in IMG/M
3300030969\|Ga0075394_11493371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	648	Open in IMG/M
3300031057\|Ga0170834_113204767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	585	Open in IMG/M
3300031122\|Ga0170822_14937326	Not Available	540	Open in IMG/M
3300031128\|Ga0170823_16262105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	741	Open in IMG/M
3300031231\|Ga0170824_121574643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	835	Open in IMG/M
3300031446\|Ga0170820_12168696	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300031708\|Ga0310686_101137738	All Organisms → cellular organisms → Bacteria → Proteobacteria	8282	Open in IMG/M
3300031708\|Ga0310686_112644157	All Organisms → cellular organisms → Bacteria → Proteobacteria	10203	Open in IMG/M
3300031718\|Ga0307474_11126334	Not Available	621	Open in IMG/M
3300031718\|Ga0307474_11634295	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031962\|Ga0307479_10454008	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300031962\|Ga0307479_10944719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	833	Open in IMG/M
3300032160\|Ga0311301_10303030	All Organisms → cellular organisms → Bacteria → Proteobacteria	2557	Open in IMG/M
3300032896\|Ga0335075_10582712	Not Available	1113	Open in IMG/M
3300032954\|Ga0335083_11359947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia piptadeniae	544	Open in IMG/M
3300033513\|Ga0316628_100865258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1195	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.15%
Host-Associated	Host-Associated	23.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.31%
Plants	Host-Associated → Plants	23.08%
Aquatic	Environmental → Aquatic	3.85%
Human	Host-Associated → Human	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.15%
Freshwater	Environmental → Aquatic → Freshwater	3.08%
Peat	Environmental → Terrestrial → Peat	2.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.77%
Digestive System	Host-Associated → Human → Digestive System	0.77%
Roots	Host-Associated → Plants → Roots	0.77%
Rhizome	Host-Associated → Plants → Rhizome	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.08%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.77%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.77%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.15%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.77%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.77%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_05109960	2170459010	Grass Soil	METVTVAATRGYTLSEMEILAGSAVVLAVLVWTVLSSLKHFRSRQVPRVVKN
rootH1_100436603	3300003323	Sugarcane Root And Bulk Soil	METVTVAATRGYTLSEMEILVGSAVVLTVLVWTVLSSLKHFRTRQMPRAIKN*
JGIcombinedJ51221_100475932	3300003505	Forest Soil	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRTRTLHRVVKN*
Ga0058896_13384782	3300004101	Forest Soil	METVTVAANRGFTLSEMEILVGSAIVLAALAWTVLSSVKHFRNRTLPRVVKN*
Ga0062388_1006343191	3300004635	Bog Forest Soil	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN*
Ga0058863_107239372	3300004799	Host-Associated	METVTVAASRGFSLSEMEILVGSAVVLAIVIWTAFSSVKHFRSRQEPRVVKN*
Ga0066672_106210002	3300005167	Soil	METITVTAARGFALSEMQLLVVGAIVIAVVTWMVLSSVKHFRSRQEPRV*
Ga0066680_102774831	3300005174	Soil	METITVTAARGFALSEMQLLVAGAIVVAVVTWMVLSSVKHFRSRQEPRV*
Ga0066678_101807681	3300005181	Soil	METITVTAARGFALSEMQLLVVGAIVIAVVTWMVLSRVKHFRSRQEPRV*
Ga0066675_106680792	3300005187	Soil	METITVTAARGFALSEMQLLVVGAIVIAVVTWMVLSSVRHFRSRQEPRV*
Ga0074072_10061063	3300005260	Soil	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRVPRVVKN*
Ga0070683_1000031816	3300005329	Corn Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHVPRVVKN*
Ga0070683_1014838282	3300005329	Corn Rhizosphere	METVTVAATRGYTLSEMEILVGSTVVLAVLVWTVLSSVKHFRSRHMPRVVKN*
Ga0070682_1009453421	3300005337	Corn Rhizosphere	TLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHVPRVVKN*
Ga0070667_1004532952	3300005367	Switchgrass Rhizosphere	METVTVAATRGYSLSEMEILVGSAVVLAVVIWTVLSSVKHFRSRQMPRVVKN*
Ga0070709_100930803	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQMPRIVKN*
Ga0070714_1014314712	3300005435	Agricultural Soil	METVTVAATRGFSLSEMEILVGSAVVLAALVWMVLSSVKHFRSSRHMPRVVKN*
Ga0070714_1022406701	3300005435	Agricultural Soil	METVTVATTRGYSLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHVPRVAKN*
Ga0070713_1009134041	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQMPRVVKN*
Ga0070681_115749082	3300005458	Corn Rhizosphere	ATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQMPRIVKN*
Ga0070741_100229372	3300005529	Surface Soil	METVTVAATRGYTLSEMEILVGSAVVLAVVIWTVLSSVKHFRSRQLPRIVKN*
Ga0070741_102118663	3300005529	Surface Soil	METVTVAASRGFALSEMEILVGSAVVLAIVAWTVFSSLKHLRSRQMPRTVKN*
Ga0070731_111941152	3300005538	Surface Soil	METVTVAASRGFTLSEMEILVGSAVVLAVVAWTVFSSLKHLRSRQMPRT*
Ga0070665_1000005438	3300005548	Switchgrass Rhizosphere	METVTVASTRGFSLSEMEILVGSAVVLAVLVWTVVSSLKHFRARQLPRVVKN*
Ga0068852_1010948202	3300005616	Corn Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLDVLVWTVLSSVKHFRSRHVPRVVKN*
Ga0068863_1017881081	3300005841	Switchgrass Rhizosphere	METVTVAATRGFPLSEMEIFIGSAIVIAVLGIMVFSGVRHFRSRHMPRV*
Ga0068858_1025793212	3300005842	Switchgrass Rhizosphere	METVTVAATRGFPLSEMEILIGSAIVIAVLGAMVFSGVRHFRSRHMPRV*
Ga0097621_1001005923	3300006237	Miscanthus Rhizosphere	METVTVAATRGYSLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRVPRVIKN*
Ga0079222_122693101	3300006755	Agricultural Soil	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHMPRVVKN*
Ga0066659_100086413	3300006797	Soil	METITVTAARGFALSEMQLLVVGALVIAVVTWMVLSRVKHFRSRQEPRV*
Ga0073928_103325632	3300006893	Iron-Sulfur Acid Spring	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRSRTLPRVVKN*
Ga0079219_117386453	3300006954	Agricultural Soil	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQLPRVVKN*
Ga0099829_112954222	3300009038	Vadose Zone Soil	QRFVMETVTVASTRGFTLSEMEILVGSAIVIAVLAWMVFSSVKHFRSRQMPRV*
Ga0105240_100215677	3300009093	Corn Rhizosphere	METVTVAASRGFTLSETEILVGSAVVLALLAWTVFSSLKHLRSRQMPRTVKN*
Ga0105240_100474754	3300009093	Corn Rhizosphere	METVTVAATRGFTEMEIFVGSAVVLAVLAGLVLSSVKHFRGRHVPRVLKN*
Ga0105240_108205302	3300009093	Corn Rhizosphere	METVTVASTRGFSLSEMEILVGSAVVLAVLVWTVLSSLKHFRARQLPRVVKN*
Ga0105247_111736831	3300009101	Switchgrass Rhizosphere	TRGFSLSEMEILVGSAVVLAVLVWTVVSSLKHFRARQLPRVVKN*
Ga0105242_115329532	3300009176	Miscanthus Rhizosphere	METVTVAATRGYSLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHMPRVVKN*
Ga0105237_127905821	3300009545	Corn Rhizosphere	LSKRFVMETVTVASTRGFSLSEMEILVGSAVVLAVLVWTVVSSLKHFRARQLPRVVKN*
Ga0105238_109623491	3300009551	Corn Rhizosphere	RVGYSLSEMEILVGSAVVLAVVAWTVFSSVKAFRRRQLPPVVEN*
Ga0134125_102496772	3300010371	Terrestrial Soil	MDTVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQMPRVVKN*
Ga0134125_112494782	3300010371	Terrestrial Soil	METVTVAASRGFTLSEMEILVGGAVVLAVVAWTVLSSLKHLRHR*
Ga0134128_100632074	3300010373	Terrestrial Soil	METVTVAASRGFTLSEMEILVGSAVVLAVVAWTVLSSLKHLRSRQMPRT*
Ga0105239_118269472	3300010375	Corn Rhizosphere	GSKLSKRFVMETVTVASTRGFSLSEMEILVGSAVVLAVLVWTVVSSLKHFRARQLPRVVKN*
Ga0126381_1049574742	3300010376	Tropical Forest Soil	METVTVAANRGYSLSEMEILVGSAVVLAIVIWTVFS
Ga0126381_1050491921	3300010376	Tropical Forest Soil	METVTVAATRGFTLSEMEILVGSAVVLAVLAWTVLSSLKHFRGRQMPRVVKN*
Ga0136449_1010599873	3300010379	Peatlands Soil	METVTVAANRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRSRTLPRVVKN*
Ga0134126_1000043931	3300010396	Terrestrial Soil	METVTVAAARGYTLSEMEILVGSVIVLAVLVWTALSGVKHFRSRQLPPVLK*
Ga0134126_111275262	3300010396	Terrestrial Soil	METVTVAAPRGFALSEMEILVGSAIVLTVLVWMVLSSVKHFRSRQLPRVVKN*
Ga0150983_132612191	3300011120	Forest Soil	METVTVAATRGFTLSEMEILVGSAVVLAVLAWTLLSSLKHFRGRQLPRVVKN*
Ga0150983_134881762	3300011120	Forest Soil	METVTVAASRGFTLSEMEILVGSAVVLAIVAWTALSSMKHFRSRQMPREAKN*
Ga0150983_141601141	3300011120	Forest Soil	METVTVAASRGFTLSEMEILVGSAVVLAVVAWTVLSSLKHLR
Ga0137362_114528912	3300012205	Vadose Zone Soil	METVTVASTRGFTLSEMEILVGSAIVIAVLAWMVFSSVKHFRSRQMPRV*
Ga0150985_1175495291	3300012212	Avena Fatua Rhizosphere	PLVPVLQRFVMETVTVAATRGYTLSEMEVLVGSAVVLAVLVWMVLSSVKHFRSRHVPRVVKN*
Ga0137398_103895591	3300012683	Vadose Zone Soil	TRGFTLSEMEILVGSAIVIAVLAWMVFSSVKHFRSRQMPRV*
Ga0137404_102632541	3300012929	Vadose Zone Soil	MEAITVTAARGFALSEMQLLVAGAIVVAVVTWMVLSSVKHFRSRQEPRV*
Ga0157374_128633282	3300013296	Miscanthus Rhizosphere	RGYSLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRVPRVIKN*
Ga0157372_107390812	3300013307	Corn Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLASVKHFRSRQMPRIVKN*
Ga0181534_103952541	3300014168	Bog	METVTIAATRGYTMSEMEMLVGSAVVLAVLAWMVLSSVKHFRSRHVPRVVKN*
Ga0182024_109660523	3300014501	Permafrost	METVTVAASRGLTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVK
Ga0181519_105954811	3300014658	Bog	METVTVAASRGFTMSEMEILVGSAVVLAVLAFTVLSSVKHFRNRTLPRVVKN*
Ga0137412_108245231	3300015242	Vadose Zone Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRSRTLPRAVKN*
Ga0187771_103995941	3300018088	Tropical Peatland	PNPLPVLSQRFVMETVTVAATRGFTLSEMEILVGSAVVLAVLAWTVLSSLKHFRGRQLPRVVKN
Ga0066655_113302462	3300018431	Grasslands Soil	METITVTAARGFALSEMQLLVVGAIVIAVVTWMVLSRVKHFRSRQEPRV
Ga0181514_12729241	3300019268	Peatland	METVTVAASRGFTMSEMEILVGSAVVLAVLALTVFSSLKHFRNRQMPRTIKN
Ga0193743_10880552	3300019889	Soil	METVTIASTRGFALSEMEILVGSAVVIAVLAWTVLSSVKHFRSRQLPRV
Ga0179590_10976601	3300020140	Vadose Zone Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWMVLSSVKHFRSRTLPRVVKN
Ga0179594_100972103	3300020170	Vadose Zone Soil	METITVTAARGFALSEMQLLVAGAIVVAVVTWMVLSSVKHFRSRQEPRV
Ga0210403_102091461	3300020580	Soil	FVMETVTVAANRGFTLSEMEILVGSAIVLAALAWTVLSSVKHFRNRTLPRVVKN
Ga0210395_109356402	3300020582	Soil	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRTRTLHRVVKN
Ga0210401_110845622	3300020583	Soil	METVTVAANRGFTLSEMEILVGSAIVLAALAWTVLSSVKHFRNRTLPRVVKN
Ga0210400_101347682	3300021170	Soil	METVTVAATRGYTLSEMEILVGSAIVLAVLAWTVLSSVKHFRSRQVPRVAKN
Ga0210400_103839963	3300021170	Soil	METVTVASTRGFTLSEMEILVGSAIVIAVLAWMVFSSVKHFRSRQMP
Ga0210388_100847412	3300021181	Soil	METVTVAASRGLTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0210393_115541382	3300021401	Soil	METVTVAASRGFTLSEMEILVGSAVVLAVSAFTVFSSLKHFRSRQMPRTV
Ga0210397_115065722	3300021403	Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRSRTLPRVVKN
Ga0210387_112222612	3300021405	Soil	EVVMETVTVAASRGFTLSEMEILVGSAVVLAVVAWTVLSSLKHLRSRQMPRT
Ga0210386_108235801	3300021406	Soil	AASRGFTLSEMEILVGSAVVLAVVAWAVFSSLKHFRSRQMPRTVKN
Ga0210386_117043142	3300021406	Soil	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRTRTLH
Ga0210383_111041032	3300021407	Soil	METVTVAASRGLTLSEMEILVGSAVVLAVLAWTVLSSVKHFRTRTLHRVVKN
Ga0210383_113269471	3300021407	Soil	LAQRFVMETVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRSRTLPRVVKN
Ga0210392_106227352	3300021475	Soil	METVTVAASRGFTLSEMEILVGSAVVLAVLAVTVFSSLKHLRSRQMPRTLKS
Ga0210398_112749361	3300021477	Soil	PLVLSQRFVMETVTVAASRGLTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVK
Ga0224712_104794072	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQMPRIVKN
Ga0242651_10258661	3300022511	Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRNRTLPRVVKN
Ga0242655_100390631	3300022532	Soil	LSEMEILVGSAIVLAALAWTVLSSVKHFRNRTLPRVVKN
Ga0242671_10895991	3300022714	Soil	SPLVLSQRFVMETVTVAASRGLTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0242654_101069641	3300022726	Soil	GIPFKCHRRGFVMETVTVAANRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRSRTLPRVVKN
Ga0207692_101588181	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	METVTVATTRGYSLSEMEILVGSAVVLAVLVWTVLSSVKHFR
Ga0207707_103740162	3300025912	Corn Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHVPRVVKN
Ga0207695_100513084	3300025913	Corn Rhizosphere	METVTVAASRGFTLSETEILVGSAVVLALLAWTVFSSLKHLRSRQMPRTVKN
Ga0207695_100615425	3300025913	Corn Rhizosphere	METVTVAATRGFTEMEIFVGSAVVLAVLAGLVLSSVKHFRGRHVPRVLKN
Ga0207695_105757002	3300025913	Corn Rhizosphere	METVTVASTRGFSLSEMEILVGSAVVLAVLVWTVLSSLKHFRARQLPRVVKN
Ga0207652_115390351	3300025921	Corn Rhizosphere	RTSPLFPVSQRFVMETVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHVPRVVKN
Ga0207694_105917982	3300025924	Corn Rhizosphere	RVGYSLSEMEILVGSAVVLAVVAWTVFSSVKAFRRRQLPPVVEN
Ga0207661_112348412	3300025944	Corn Rhizosphere	METVTVAATRGYTLSEMEILVGSTVVLAVLVWTVLSSVKHFRSRHMPRVVKN
Ga0207667_113292942	3300025949	Corn Rhizosphere	LSKRFVMETVTVASTRGFSLSEMEILVGSAVVLAVLVWTVVSSLKHFRARQLPRVVKN
Ga0207702_123163841	3300026078	Corn Rhizosphere	TRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQMPRVVKN
Ga0207641_113751981	3300026088	Switchgrass Rhizosphere	METVTVAATRGYSLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRVP
Ga0207698_116616942	3300026142	Corn Rhizosphere	METVTVAASRGFSLSEMEILVGSAVVLAIVIWTAFSSVKHFRSRQEPRVVKN
Ga0268266_101426193	3300028379	Switchgrass Rhizosphere	METVTVAATRGYSLSEMEILVGSAVVLAVVIWTVLSSVKHFRSRQMPRVVKN
Ga0137415_100680304	3300028536	Vadose Zone Soil	METITVATTRGFTLSEMEILVGSAIVIAALAMMVLSGLKHFRSRHQPRA
Ga0265334_100537022	3300028573	Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRQVPRIVKN
Ga0265334_102785691	3300028573	Rhizosphere	METVTVAATRGYTLSEMEILVGSAVVLAVLVWMVLSSVKHFRSRHVPRVVKN
Ga0302232_105110442	3300028789	Palsa	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKNFRNRTLPRVVKN
Ga0265338_105189592	3300028800	Rhizosphere	METVTVAANRGFTLSEMEILVGSAVVLVALAWTVLSSVKHFRNRTLPRVVKN
Ga0302229_103960212	3300028879	Palsa	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0265462_124202782	3300030738	Soil	SEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0265460_108487071	3300030740	Soil	PNPLFVLSQRFVMETVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0265461_133429401	3300030743	Soil	PNPLFVLSQRFVMETVTVAASRGLTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0075384_114542812	3300030841	Soil	METVTVAASRGFTLSEMEILVGSTVVLAVVAWTVFSSLKHLRSRQMPRT
Ga0075388_108937962	3300030848	Soil	METVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHLPRVLKN
Ga0302314_115754331	3300030906	Palsa	MEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0138302_11384372	3300030937	Soil	FVMETVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSLKHFRNRTLPRVVKN
Ga0075394_114933712	3300030969	Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRSRTLPRAVKN
Ga0170834_1132047672	3300031057	Forest Soil	METVTVAATRGFTLSEMEILVGSAVVLAVLAWTLLSSLKHLRGRQMPRVVKN
Ga0170822_149373261	3300031122	Forest Soil	RGFTLSEMEILVGSAVVLAALAWTVLSSLKHFRNRTLPRVVKN
Ga0170823_162621052	3300031128	Forest Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSVKHFRSR
Ga0170824_1215746432	3300031231	Forest Soil	METVTVAANRGFTLSEMEILVGSAVVLAALAWTVLSSLKHFRNRTLPRVVKN
Ga0170820_121686962	3300031446	Forest Soil	METVTVAASRGFTLSEMEILVGSAVVLAVVAWTVLSSLKHLRSRQMPRT
Ga0310686_1011377386	3300031708	Soil	METVTVAASRGFTLSEMEILVGSAVVLAVLAWTVFSSFKHLRSRQMPRTVKN
Ga0310686_1126441575	3300031708	Soil	METVTVAANRGFTMSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTMPRVVKN
Ga0307474_111263342	3300031718	Hardwood Forest Soil	EVVMETVTVAASRGFTLSEMEILVGSAVVLAVVAWTVLSGLKHLRSR
Ga0307474_116342951	3300031718	Hardwood Forest Soil	LSQRFVMETVTVAASRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRNRTLPRVVKN
Ga0307479_104540082	3300031962	Hardwood Forest Soil	METVTVAATRGFTLSEMEILVGSAVVLAVLAWTLLSSLKHFRGRQLPRVVKN
Ga0307479_109447191	3300031962	Hardwood Forest Soil	METITVTAARGFALSEMQLLVVGAIVIGVVTWMVLSSVKHFRSRQEPRV
Ga0311301_103030304	3300032160	Peatlands Soil	METVTVAANRGFTLSEMEILVGSAVVLAVLAWTVLSSVKHFRSRTLPRVVKN
Ga0335075_105827121	3300032896	Soil	VAQRFVMETVTVAATRGYTLSEMEILVGSAVVLAVLVWTVLSSVKHFRSRHMPRVVKN
Ga0335083_113599472	3300032954	Soil	METVTVAATRGYTLSEMEMLVGSAVVLAVLAWMVLSSVKHFRSRQIPRVLKN
Ga0316628_1008652582	3300033513	Soil	METVTVAASRGDTLSEMDILVGSAVVLAVLVWAVLSSVKHFRSRQLPRAVKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences