Metagenome / Metatranscriptome Family F062801

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062801
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	61 residues
Representative Sequence	DLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRG
Number of Associated Samples	112
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.69 %
% of genes near scaffold ends (potentially truncated)	90.00 %
% of genes from short scaffolds (< 2000 bps)	94.62 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.385 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.538 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 25.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.108.1.0: automated matches	d6e1xa_	6e1x	0.76655
d.108.1.0: automated matches	d2z10a_	2z10	0.76127
d.108.1.1: N-acetyl transferase, NAT	d2fcka1	2fck	0.76127
d.108.1.1: N-acetyl transferase, NAT	d1yrea1	1yre	0.7411
d.108.1.1: N-acetyl transferase, NAT	d1nsla1	1nsl	0.7338

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00583	Acetyltransf_1	3.85
PF07883	Cupin_2	3.08
PF01243	Putative_PNPOx	2.31
PF13302	Acetyltransf_3	2.31
PF00211	Guanylate_cyc	2.31
PF07676	PD40	1.54
PF10604	Polyketide_cyc2	1.54
PF00561	Abhydrolase_1	1.54
PF02517	Rce1-like	0.77
PF02580	Tyr_Deacylase	0.77
PF13738	Pyr_redox_3	0.77
PF00990	GGDEF	0.77
PF13649	Methyltransf_25	0.77
PF01872	RibD_C	0.77
PF02574	S-methyl_trans	0.77
PF01548	DEDD_Tnp_IS110	0.77
PF06863	DUF1254	0.77
PF13442	Cytochrome_CBB3	0.77
PF10502	Peptidase_S26	0.77
PF13193	AMP-binding_C	0.77
PF00723	Glyco_hydro_15	0.77
PF07366	SnoaL	0.77
PF00296	Bac_luciferase	0.77
PF07969	Amidohydro_3	0.77
PF01230	HIT	0.77
PF02073	Peptidase_M29	0.77
PF02371	Transposase_20	0.77
PF00011	HSP20	0.77
PF01636	APH	0.77
PF00903	Glyoxalase	0.77
PF12680	SnoaL_2	0.77
PF00175	NAD_binding_1	0.77
PF08281	Sigma70_r4_2	0.77
PF02494	HYR	0.77
PF00311	PEPcase	0.77
PF00756	Esterase	0.77
PF13191	AAA_16	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.31
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.54
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.77
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.77
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	0.77
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.77
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.77
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.77
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.77
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.77
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.77
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.77
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.38 %
Unclassified	root	N/A	44.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.38 %
Unclassified	root	N/A	44.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.38 %
Unclassified	root	N/A	44.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.23 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.23 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.77 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.77 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.15 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.54 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.77 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.15 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.54 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	0.77 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.15 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.54 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.77 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.15 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.54 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.77 %
Ilumatobacter fluminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter fluminis	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.15 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.54 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.77 %
Ilumatobacter fluminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter fluminis	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090013\|LWAnNN_GHFF8UE02H6R60	Not Available	520	Open in IMG/M
2170459020\|G1P06HT01B2YWN	Not Available	608	Open in IMG/M
3300000891\|JGI10214J12806_10119871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300000891\|JGI10214J12806_10775002	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300002568\|C688J35102_120048664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	859	Open in IMG/M
3300002568\|C688J35102_120558746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1179	Open in IMG/M
3300003324\|soilH2_10415133	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300004081\|Ga0063454_100683131	Not Available	769	Open in IMG/M
3300004153\|Ga0063455_101458801	Not Available	531	Open in IMG/M
3300004157\|Ga0062590_100210711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1417	Open in IMG/M
3300004157\|Ga0062590_102601961	Not Available	538	Open in IMG/M
3300004480\|Ga0062592_102470896	Not Available	522	Open in IMG/M
3300005093\|Ga0062594_102061736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300005171\|Ga0066677_10702709	Not Available	565	Open in IMG/M
3300005187\|Ga0066675_11320508	Not Available	531	Open in IMG/M
3300005327\|Ga0070658_11553649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300005332\|Ga0066388_108843426	Not Available	500	Open in IMG/M
3300005338\|Ga0068868_100402097	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300005347\|Ga0070668_101605289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300005365\|Ga0070688_100255469	Not Available	1249	Open in IMG/M
3300005365\|Ga0070688_101621312	Not Available	528	Open in IMG/M
3300005406\|Ga0070703_10427968	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005457\|Ga0070662_101190560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300005535\|Ga0070684_100589086	Not Available	1034	Open in IMG/M
3300005539\|Ga0068853_102212763	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005547\|Ga0070693_101440271	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300005548\|Ga0070665_102460015	Not Available	522	Open in IMG/M
3300005556\|Ga0066707_11009096	Not Available	507	Open in IMG/M
3300005618\|Ga0068864_100621954	Not Available	1049	Open in IMG/M
3300005764\|Ga0066903_108835614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300006028\|Ga0070717_10636640	Not Available	968	Open in IMG/M
3300006358\|Ga0068871_102226630	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006577\|Ga0074050_12026461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300006876\|Ga0079217_10971556	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006894\|Ga0079215_10819369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300009094\|Ga0111539_13532012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	501	Open in IMG/M
3300009148\|Ga0105243_10132960	Not Available	2113	Open in IMG/M
3300009148\|Ga0105243_12409211	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009162\|Ga0075423_10920979	Not Available	927	Open in IMG/M
3300009176\|Ga0105242_10152479	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300009789\|Ga0126307_10875935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300009792\|Ga0126374_10691212	Not Available	766	Open in IMG/M
3300009792\|Ga0126374_11703891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300009840\|Ga0126313_11308361	Not Available	599	Open in IMG/M
3300010037\|Ga0126304_10696544	Not Available	686	Open in IMG/M
3300010122\|Ga0127488_1020612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	537	Open in IMG/M
3300010166\|Ga0126306_11442941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300010322\|Ga0134084_10213414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300010373\|Ga0134128_11265971	Not Available	813	Open in IMG/M
3300010375\|Ga0105239_11841267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300010375\|Ga0105239_12096936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	657	Open in IMG/M
3300010396\|Ga0134126_10691009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1160	Open in IMG/M
3300010401\|Ga0134121_10954484	All Organisms → cellular organisms → Bacteria → Terrabacteria group	838	Open in IMG/M
3300011119\|Ga0105246_10468065	Not Available	1063	Open in IMG/M
3300012208\|Ga0137376_11343791	Not Available	605	Open in IMG/M
3300012209\|Ga0137379_11096567	Not Available	702	Open in IMG/M
3300012354\|Ga0137366_10400648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	999	Open in IMG/M
3300012907\|Ga0157283_10380378	Not Available	518	Open in IMG/M
3300012913\|Ga0157298_10382988	Not Available	529	Open in IMG/M
3300012948\|Ga0126375_10870953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300012951\|Ga0164300_10021640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2237	Open in IMG/M
3300012957\|Ga0164303_10597457	Not Available	726	Open in IMG/M
3300012958\|Ga0164299_10535749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300012961\|Ga0164302_10121251	Not Available	1488	Open in IMG/M
3300012985\|Ga0164308_10038590	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2988	Open in IMG/M
3300012986\|Ga0164304_10541327	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012989\|Ga0164305_12126935	Not Available	515	Open in IMG/M
3300013104\|Ga0157370_10171194	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300013307\|Ga0157372_10559300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300013770\|Ga0120123_1072024	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300014268\|Ga0075309_1144849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300014325\|Ga0163163_10686556	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300014325\|Ga0163163_13103734	Not Available	518	Open in IMG/M
3300014745\|Ga0157377_10756706	Not Available	712	Open in IMG/M
3300015200\|Ga0173480_10785500	Not Available	606	Open in IMG/M
3300015371\|Ga0132258_10850305	Not Available	2302	Open in IMG/M
3300015371\|Ga0132258_12600032	Not Available	1265	Open in IMG/M
3300015373\|Ga0132257_100706791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300015373\|Ga0132257_100970715	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300015373\|Ga0132257_102036841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300015374\|Ga0132255_100435210	Not Available	1916	Open in IMG/M
3300018032\|Ga0187788_10068880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1233	Open in IMG/M
3300018429\|Ga0190272_11343246	Not Available	714	Open in IMG/M
3300019356\|Ga0173481_10055310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1381	Open in IMG/M
3300019377\|Ga0190264_11666696	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300022756\|Ga0222622_11146260	All Organisms → cellular organisms → Bacteria → Terrabacteria group	572	Open in IMG/M
3300023069\|Ga0247751_1094894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300025899\|Ga0207642_10478336	All Organisms → cellular organisms → Bacteria → Terrabacteria group	759	Open in IMG/M
3300025906\|Ga0207699_10944951	Not Available	637	Open in IMG/M
3300025909\|Ga0207705_10178951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1599	Open in IMG/M
3300025916\|Ga0207663_10512735	Not Available	933	Open in IMG/M
3300025924\|Ga0207694_10586008	All Organisms → cellular organisms → Bacteria → Terrabacteria group	937	Open in IMG/M
3300025924\|Ga0207694_10744578	Not Available	827	Open in IMG/M
3300025926\|Ga0207659_10348962	Not Available	1227	Open in IMG/M
3300025927\|Ga0207687_11080109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300025927\|Ga0207687_11098870	Not Available	683	Open in IMG/M
3300025932\|Ga0207690_11092650	Not Available	665	Open in IMG/M
3300025932\|Ga0207690_11197329	Not Available	634	Open in IMG/M
3300025933\|Ga0207706_10816453	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300025937\|Ga0207669_11473770	Not Available	580	Open in IMG/M
3300025944\|Ga0207661_10145777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2042	Open in IMG/M
3300025944\|Ga0207661_10556865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300025945\|Ga0207679_10217772	Not Available	1605	Open in IMG/M
3300025945\|Ga0207679_10593235	Not Available	997	Open in IMG/M
3300025972\|Ga0207668_11048679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300025986\|Ga0207658_11428651	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026121\|Ga0207683_11060682	Not Available	752	Open in IMG/M
3300026142\|Ga0207698_11318773	Not Available	736	Open in IMG/M
3300028716\|Ga0307311_10110473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300028722\|Ga0307319_10123115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300028768\|Ga0307280_10175113	Not Available	750	Open in IMG/M
3300028778\|Ga0307288_10054086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1388	Open in IMG/M
3300028807\|Ga0307305_10132756	Not Available	1150	Open in IMG/M
3300028811\|Ga0307292_10504262	Not Available	519	Open in IMG/M
3300028812\|Ga0247825_11095474	Not Available	580	Open in IMG/M
3300028819\|Ga0307296_10072157	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300028819\|Ga0307296_10293315	Not Available	886	Open in IMG/M
3300028824\|Ga0307310_10171628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300028824\|Ga0307310_10464439	Not Available	634	Open in IMG/M
3300028876\|Ga0307286_10357830	Not Available	544	Open in IMG/M
3300028880\|Ga0307300_10074239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300028885\|Ga0307304_10265009	Not Available	751	Open in IMG/M
3300031164\|Ga0307502_10040629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300031198\|Ga0307500_10090345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300031740\|Ga0307468_100687600	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300031938\|Ga0308175_100360415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1506	Open in IMG/M
3300032074\|Ga0308173_10457045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300033550\|Ga0247829_10674138	Not Available	860	Open in IMG/M
3300034149\|Ga0364929_0067734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter fluminis	1099	Open in IMG/M
3300034659\|Ga0314780_016758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1197	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.38%
Host-Associated	Host-Associated	33.85%
Engineered	Engineered	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.85%
Plants	Host-Associated → Plants	33.85%
Aquatic	Environmental → Aquatic	1.54%
Solid Waste	Engineered → Solid Waste	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.23%
Roots	Host-Associated → Plants → Roots	2.31%
Freshwater	Environmental → Aquatic → Freshwater	0.77%
Sediment	Environmental → Aquatic → Sediment	0.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%
Grass	Engineered → Solid Waste → Grass	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.46%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.54%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.77%
Composting	Engineered → Solid Waste → Grass → Composting	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.08%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.77%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.15%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090013	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13Cmethane anaerobic no nitrate	Environmental	Open in IMG/M
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnNN_04027700	2088090013	Freshwater Sediment	AAEAMEAAIGDLWSRTDAEAITAYIADGDNEPSRRLAAKLGFVVRGKGRGRSAEPMTVYALRRDDWIALARR
2NP_03009630	2170459020	Switchgrass, Maize And Mischanthus Litter	ADGITAYIAEGENEASRRVAAKLGFAVRGQGRGRSGESMTVYELRRDAWQPGG
JGI10214J12806_101198711	3300000891	Soil	SRAGVESVTAYIEEGENGPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGD*
JGI10214J12806_107750021	3300000891	Soil	RTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL*
C688J35102_1200486641	3300002568	Soil	IGDLWSRAETDCITAYIDEGENEASRRVAAKLGFAVRRQGRGRSGELMTVYELRRDAWQQGG*
C688J35102_1205587463	3300002568	Soil	MGVAIGDLWGRTDADCVTAYIGEGQNEVAPRRGQARIRGAWSGRGRSGEPMTVYELRRDVWHRREG*
soilH2_104151333	3300003324	Sugarcane Root And Bulk Soil	IDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLQKRP*
Ga0063454_1006831312	3300004081	Soil	SRAETDCITAYIDEGENEASRRVAAKLGFAERGQGRGRSGELMTVYELRRDTWQPGG*
Ga0063455_1014588012	3300004153	Soil	AAIDDLWSRTDAQTITAYIEDGRNEPSRRVAAKLGFAVRSRGRGRSGEPMTVYTLCRDDWLRRL*
Ga0062590_1002107111	3300004157	Soil	YIEEGENGPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGD*
Ga0062590_1026019611	3300004157	Soil	ITAYIEEGANEPSRRLAAKLGFAARGPGRGRSGEPMTVYEVRRDDWLRRGL*
Ga0062592_1024708961	3300004480	Soil	RVDVESITAYIEEGENEPSRRLAAKLGFTVRSHGRGRFGEPMTVYELRRDVWDRLGG*
Ga0062594_1020617361	3300005093	Soil	DSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRDL*
Ga0066677_107027092	3300005171	Soil	MRVAIGDLWRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0066675_113205081	3300005187	Soil	MRAAIGDLWGRAEADAITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGEPVTVYELRRDAWQPGG*
Ga0070658_115536491	3300005327	Corn Rhizosphere	MEAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0066388_1088434262	3300005332	Tropical Forest Soil	IEEGENEASRRVAAKLGFAVRCQGRGRSGEPMTVYELRRDAWQPGG*
Ga0068868_1004020971	3300005338	Miscanthus Rhizosphere	VESVTAYIEEGEAEPSRRLAANLGFTVRSQGHGRFGEPMTVYELRRAAWDRRRG*
Ga0070668_1016052891	3300005347	Switchgrass Rhizosphere	MHAAIGDLWDRTDAESTTAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0070688_1002554691	3300005365	Switchgrass Rhizosphere	TDVETITAYISYGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0070688_1016213122	3300005365	Switchgrass Rhizosphere	TDVETITAYISYGGNEASRRVAAKLGFSVRGRGHGRSGELMTVYRLPRDDWLRQRP*
Ga0070703_104279682	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GIATEAMHAAIGDLWGRADADVITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGEPMAVYELRRDAWQPGG*
Ga0070662_1011905601	3300005457	Corn Rhizosphere	TEAMEAAIDDLFSRTDIETITAYISDGGNDASRRVAAKLGFSVRGRGHGRAGEPMTVYTLPRDDRLRQRP*
Ga0070684_1005890861	3300005535	Corn Rhizosphere	ITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRPGKRSE
Ga0068853_1022127631	3300005539	Corn Rhizosphere	IGDIWGRAGVESLTAYIEEGENEPSRRLAVSLGFKVRGRGRGRFGEPMTVYELRAPEH*
Ga0070693_1014402711	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	AAIADLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0070665_1024600151	3300005548	Switchgrass Rhizosphere	ITAYISYGGNEASRRVAAKLGFSVRGRGHGRSGELMTVYRLPRDDWLRQRP*
Ga0066707_110090961	3300005556	Soil	QGIATEATRVAIGDVWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0068864_1006219541	3300005618	Switchgrass Rhizosphere	LFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0066903_1088356142	3300005764	Tropical Forest Soil	AAIDDLWSRTDVQTITAYIEDGRNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLRRDDRPRRL*
Ga0070717_106366402	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DDLWGRTDVDCVTAYIGEGQNEASRRVAAKLGFAVRGPGRGRSGEPMTVYELRRDVWHRREG*
Ga0068871_1022266301	3300006358	Miscanthus Rhizosphere	RAGVESLTAYIAVGGNEPSCRLAAGLGFTVRGPGRGRFGEPMTVYELRRDTVET*
Ga0074050_120264611	3300006577	Soil	TAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0079217_109715561	3300006876	Agricultural Soil	LWRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD
Ga0079215_108193691	3300006894	Agricultural Soil	DDLWSRSDVQTITAYIEDGQNESSRRVAAKLGFAVRSTARGRSGEPTTVYALCRDDWLRRL*
Ga0111539_135320122	3300009094	Populus Rhizosphere	IATEAMRVAIGDLWSRGGVESVTAYIEEGEAEPSRRLAANLGFTVRSQGHGRFGEPMTVYELRRAAWDRRRG*
Ga0105243_101329604	3300009148	Miscanthus Rhizosphere	LFSRTDVETITAYISDGGNEASRRVAAKLGFSVRSRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0105243_124092112	3300009148	Miscanthus Rhizosphere	LFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRAGEPMTVYTLPRDDRLRQRP
Ga0075423_109209791	3300009162	Populus Rhizosphere	LATEAMRAAISDVWGRAEADAITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGEPVTVYELRRDAWQPGG*
Ga0105242_101524794	3300009176	Miscanthus Rhizosphere	SRTDVQTITAYIEAAQNEPSRRVAAKLGFAVRNTGRGRSGEPMTVYELRRDVWHRRGG*
Ga0126307_108759351	3300009789	Serpentine Soil	GVESVTAYIEEGENEPSRHLAASLGFRVRSHGRGRFGEPMTVYELLRDVWDRRGD*
Ga0126374_106912122	3300009792	Tropical Forest Soil	AYIEDEENVPSRRLAAKLGFAVRGKGRGRRGEPMTVYALRRDDWQRQP*
Ga0126374_117038912	3300009792	Tropical Forest Soil	NEGIAAEAMEAAIDDLWSRTDFESITAYIEDGENEPSRRLAAKLGFAVRGKGRGRSGEPMTVYALRRDDWLRRP*
Ga0126313_113083611	3300009840	Serpentine Soil	ATEAMEAAIDELFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0126304_106965442	3300010037	Serpentine Soil	IDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGCSGEPMTVYTLPRDDWLRQRP*
Ga0127488_10206122	3300010122	Grasslands Soil	MRVAIGDLWSRAGVESVTAYIEEGENEPSRHLAASLGFTMRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0126306_114429412	3300010166	Serpentine Soil	RRAGVESVTAYIEEGENEPSRHLAASLGFRVRSHGRGRFGEPMTVYELLREIWDRRED*
Ga0134084_102134141	3300010322	Grasslands Soil	ENRRNQRIATEAMRVAIADLWGRAGVESVTAYIEEGENEPSRHLAASLVFRVRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0134128_112659712	3300010373	Terrestrial Soil	TAYIEEGENEASRRVAAKLGFAVRGRGRGRSGEPMTVYELRRDASEPAG*
Ga0105239_118412671	3300010375	Corn Rhizosphere	EAVIDDLWSRTGAEAITAYIEDGENEPSRRLAARLGFAVRGKGRGRSGEPMTVYALRRDDWLRRP*
Ga0105239_120969362	3300010375	Corn Rhizosphere	LWGRADADGITAYIEESANEASRRVAAKLGFAVRGRGRGRSGEPMTVYELRRDAWKPAG*
Ga0134126_106910091	3300010396	Terrestrial Soil	AIGDLWSRAGVESMTAYIEEGENESSRRLAANLGFTVRGNGRGRFGEPMTVYELRRDVWDRPGG*
Ga0134121_109544842	3300010401	Terrestrial Soil	MHAAIGDLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0105246_104680651	3300011119	Miscanthus Rhizosphere	RTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0137376_113437911	3300012208	Vadose Zone Soil	MRVAIGDLWSRAGVKSVTAYIEEGENEPSRHLAASLGFTMRSQGRGRFGEPMTVYELLREVWDRRGD*
Ga0137379_110965671	3300012209	Vadose Zone Soil	VRENQRNQRIATAAMRVAICDLWSRAGVESVTAYIEEGEKEPSRRLAASLGFTMRSQGRGRFGEPM
Ga0137366_104006481	3300012354	Vadose Zone Soil	RENRRNQRIATEAMRVAIGDLWRRAGVESVTAYIEEGENEPSRHLAASLGFTMRSKGRGRFGEPMTVYELLRDVWDRRGD*
Ga0157283_103803781	3300012907	Soil	IGDLWGRAGVESVTAYIEERENEPSRRLAASLGFTMRSRGRGRFGEPMTVYELRRDGWNCRGG*
Ga0157298_103829882	3300012913	Soil	MEAAIDDLFSRTDIETITAYISDGGNEASRRVAAKLGFSVRGRVHGRAGEPMTVYTLPRDDWLRQRP*
Ga0126375_108709533	3300012948	Tropical Forest Soil	DADHITAYIDDGQNDPSHRLAAKLGFTVRGKGRGRSGAPMTVFELRRDVWHRRRT*
Ga0164300_100216403	3300012951	Soil	DLWSRTDVHTITAYIEAAQNEPSRRVAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0164303_105974573	3300012957	Soil	MQAAVADLWTRTDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRR
Ga0164299_105357491	3300012958	Soil	ITAYIEAVQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL*
Ga0164302_101212513	3300012961	Soil	GVESLTAYIEEGENEPSRRLAVRLGFKVRGRGRGRFGEPMTVYELRRT*
Ga0164308_100385902	3300012985	Soil	DRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG*
Ga0164304_105413272	3300012986	Soil	AIRDVWGRAGVESLTAYIEEGENEPSRRLAVSLGFKVRGRGRGRFDEPMTVYELRRTRALGWASAPE*
Ga0164305_121269352	3300012989	Soil	WTRNDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDRRDL*
Ga0157370_101711941	3300013104	Corn Rhizosphere	IEEGENEASRRVAAKLGFAVRGQGRGRSGEPMTVYELRRDAWQPGG*
Ga0157372_105593001	3300013307	Corn Rhizosphere	IDDLWSRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRADWLRRL*
Ga0120123_10720242	3300013770	Permafrost	VTAYIEEGENEPSRRLAASLGFTKRSQGRGRFGEPMTVYELLRDVWDRRGG*
Ga0075309_11448491	3300014268	Natural And Restored Wetlands	GIATEAMEAAIDDLWGRTDVESITAYIEEGANEPSRRLAAKLGFAARGPGRGRSGEPMTVYEVRRDDWLRRGL*
Ga0163163_106865562	3300014325	Switchgrass Rhizosphere	MHAAIGDLWDRTDAESTTAYIEEGDNAASRQLAAKLGFVVRGKGGGRSGEPMTVYELRRDAWQRRGG*
Ga0163163_131037342	3300014325	Switchgrass Rhizosphere	LFSRTDIETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMMVYTLPRDDWLRQRP
Ga0157377_107567063	3300014745	Miscanthus Rhizosphere	DLWGRAGVESVTAYIEERQNEPSRRLAASLGFTMRSRGRGRFGEPMTVYELRRDGWNCRGG*
Ga0173480_107855002	3300015200	Soil	EAMHAAIGDLWSRAETDCITAYIDEGENDASRRVAAKLGFAVRGQGHGRSGEPMTVYELRRDAWQSGG*
Ga0132258_108503054	3300015371	Arabidopsis Rhizosphere	IATEAMRAAIGDLWGRAEADGITAYIEEGGNGASRRVAAKLGFAVRGQGRGRSGEPMTVYELRRDAWQPGG*
Ga0132258_126000324	3300015371	Arabidopsis Rhizosphere	AGVESLTAYIEEGENEPSRRLAVSLGFRVRGRGRGRFGEPMTVYELRRT*
Ga0132257_1007067913	3300015373	Arabidopsis Rhizosphere	RTDVQTITAYIEAVQNEPSRRVAAKLGFAVRSTGRGRSGGPMTVYTLCRDDWLRRL*
Ga0132257_1009707151	3300015373	Arabidopsis Rhizosphere	DGIATEAMEAAIDDLFSRTDVETITAYISDGGREASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP*
Ga0132257_1020368411	3300015373	Arabidopsis Rhizosphere	DGITAYIEEGGNEASRRVAAKFGFAVRGQGRGRSGEPVTVDELRRDAWQPGG*
Ga0132255_1004352103	3300015374	Arabidopsis Rhizosphere	SRTDVQTITAYIDEGQNEPSRRVAAKLGFAVRSTGRGRSGELMTVYTLCRDDWLRRL*
Ga0187788_100688804	3300018032	Tropical Peatland	MHAAISDLWDRTDANCVTAYIEEGDNAASRRLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWHRRGT
Ga0190272_113432461	3300018429	Soil	EIVTAYIEEGANEPSRRLAAKLGFAARGPGRGRSGEPMTVYEVRRDDWLRRGL
Ga0173481_100553103	3300019356	Soil	VQTIAAYIEDGQNEPSRRVAAKLGFAVRSSGRGRSGEPMTVYTLYRDDWLRRL
Ga0190264_116666961	3300019377	Soil	AAMRVAIGDLWSRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD
Ga0222622_111462602	3300022756	Groundwater Sediment	DLWTRTDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRD
Ga0247751_10948942	3300023069	Soil	SRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL
Ga0207642_104783362	3300025899	Miscanthus Rhizosphere	MEAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRDRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207699_109449512	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RAAIGDLWGRAEADSITAYIEEGENEASRRVAAKLGFAVRGQGRGRSGGPMTVYELRRDAWQPSAAAE
Ga0207705_101789511	3300025909	Corn Rhizosphere	DLFTRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQR
Ga0207663_105127351	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RNQGIATEATRVAIGDLWSRGGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLRDIWDRRGD
Ga0207694_105860081	3300025924	Corn Rhizosphere	DLFSCTDVGTITAYISDGGNEASRRVADKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQR
Ga0207694_107445781	3300025924	Corn Rhizosphere	SRTDVQTITAYIDEGQNEPSRRVAAKLGFAVRSPGRGRSGEPMTVYTLRRDDWLRRL
Ga0207659_103489621	3300025926	Miscanthus Rhizosphere	AAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207687_110801091	3300025927	Miscanthus Rhizosphere	TLADLWRRTRVESVVAYISGENEPSRRLAAKLGYQVRGPGHGRSAEPMTVFVLRRP
Ga0207687_110988702	3300025927	Miscanthus Rhizosphere	TITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207690_110926502	3300025932	Corn Rhizosphere	VESVTAYIEERENEPSRRLAASLGFTMRSRGRGRFGEPMTVYELRRDGWNCRGG
Ga0207690_111973291	3300025932	Corn Rhizosphere	LFSRTDIETITAYISDGGNDASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207706_108164531	3300025933	Corn Rhizosphere	TEAMEAAIDDLFSRTDIETITAYISDGGNDASRRVAAKLGFSVRGRGHGRAGEPMTVYTLPRDDRLRQRP
Ga0207669_114737701	3300025937	Miscanthus Rhizosphere	EAAIDDLFSRTDVETITAYISDGGNEASRRVAAKLGFSVRSRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207661_101457773	3300025944	Corn Rhizosphere	IETITAYISDRGNDASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0207661_105568651	3300025944	Corn Rhizosphere	GIGSEAMHAAIGDLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQTRGS
Ga0207679_102177724	3300025945	Corn Rhizosphere	TDVETITAYISDGENEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPREDWLRQRP
Ga0207679_105932352	3300025945	Corn Rhizosphere	AYIEEGENEASRRVAAKLGFAVRGRGRGRSGEPMTVYELRRDAWHQGG
Ga0207668_110486792	3300025972	Switchgrass Rhizosphere	MHAAIGDLWDRTDAESTTAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG
Ga0207658_114286512	3300025986	Switchgrass Rhizosphere	GDLWDRTDAESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRAGEPMTVYELRRDVWQRRGG
Ga0207683_110606823	3300026121	Miscanthus Rhizosphere	VETDLITAYIADGDHGASRRVAAKLGFTVRGEGRGRSGEPMTVYELRRDAWQPGG
Ga0207698_113187732	3300026142	Corn Rhizosphere	EAAIDDLWSRTDARTITAYIEDGRNEPSRRVAAKLGFAVRGPGRGRSGEAMTVYALCRDD
Ga0307311_101104731	3300028716	Soil	DLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRFGEPMTVYELLRAVWDRRG
Ga0307319_101231152	3300028722	Soil	MRVAIGDLWSRAGVESVTAYIEEGENGPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGG
Ga0307280_101751131	3300028768	Soil	IGDLWSRGGVESVTAYIEEWENEPSRRLAASLGFTMRGQGRGRFGEPMTVYELLRAVWDRRGG
Ga0307288_100540862	3300028778	Soil	TRIDVDSITAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRDL
Ga0307305_101327561	3300028807	Soil	RGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGG
Ga0307292_105042621	3300028811	Soil	AMRVAIGDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGG
Ga0247825_110954741	3300028812	Soil	LWSRAETDCITAYIDEGENQASRRVAANLGFAVRGQGRGRSGEPMTVYELRRDAWQSGG
Ga0307296_100721571	3300028819	Soil	DLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRG
Ga0307296_102933152	3300028819	Soil	GVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGG
Ga0307310_101716282	3300028824	Soil	AIGDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRSGEPMTVYELLRAVWDRRGG
Ga0307310_104644391	3300028824	Soil	AIGDLWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRGQGRGRFGEPMTVYELLRAVWDRRGG
Ga0307286_103578302	3300028876	Soil	SITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRDVWQRRGG
Ga0307300_100742391	3300028880	Soil	LWSRGGVESVTAYIEEGENEPSRRLAASLGFTMRSQGRGRFGEPMTVYELLRDVWDRRGG
Ga0307304_102650091	3300028885	Soil	TAYIEDGENEPSRRLAVKLGFTVRGPGRGRSGEPMTVYELRRDTRHRRDL
Ga0307502_100406291	3300031164	Soil	EAAIDDLWSRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSTGRGRSGEPMTVYTLCRDDWLRRL
Ga0307500_100903451	3300031198	Soil	AYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLRDVWDRRGD
Ga0307468_1006876002	3300031740	Hardwood Forest Soil	EAMEAAIDDLWSCTDVQTITAYIEDGQNEPSRRVAAKLGFAVRSAGRGRSGEPMTVYTLCRDDWLRRL
Ga0308175_1003604151	3300031938	Soil	AESITAYIEEGDNAASRQLAAKLGFVVRGQGRGRSGEPMTVYELRRAVWQRRGG
Ga0308173_104570451	3300032074	Soil	DLWNRAGVESVTAYIEAGKNEPSRRLAASLGFTARSQGRGRFGEPMTVYELLRDVWDGRG
Ga0247829_106741381	3300033550	Soil	RTDVETITAYISDGGNEASRRVAAKLGFSVRGRGHGRSGEPMTVYTLPRDDWLRQRP
Ga0364929_0067734_887_1090	3300034149	Sediment	MRVAIGDLWRRAGVESVTAYIEEGENEPSRHLAASLGFRVRSQGRGRFGEPMTVYELLREVWDRRGD
Ga0314780_016758_27_227	3300034659	Soil	MEAAIDDLWRRTDVQTITAYIEDGQNEPSRRVAAKLGFAVRGTGRGRSGEPMTVYTLCRDDWLRRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences