NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062736

Metagenome / Metatranscriptome Family F062736

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062736
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 70 residues
Representative Sequence MLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQD
Number of Associated Samples 102
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.08 %
% of genes near scaffold ends (potentially truncated) 28.46 %
% of genes from short scaffolds (< 2000 bps) 93.08 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (56.154 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.539 % of family members)
Environment Ontology (ENVO) Unclassified
(38.462 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.615 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.53%    β-sheet: 0.00%    Coil/Unstructured: 69.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF16317Glyco_hydro_99 12.31
PF00497SBP_bac_3 6.15
PF07040DUF1326 5.38
PF17164DUF5122 2.31
PF09948DUF2182 2.31
PF01979Amidohydro_1 1.54
PF03734YkuD 0.77
PF01370Epimerase 0.77
PF00483NTP_transferase 0.77
PF08241Methyltransf_11 0.77
PF00685Sulfotransfer_1 0.77
PF01066CDP-OH_P_transf 0.77
PF00296Bac_luciferase 0.77
PF04961FTCD_C 0.77
PF03023MurJ 0.77
PF05050Methyltransf_21 0.77
PF13586DDE_Tnp_1_2 0.77
PF14307Glyco_tran_WbsX 0.77
PF03129HGTP_anticodon 0.77
PF13219DUF4027 0.77
PF00106adh_short 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG5588Uncharacterized conserved protein, DUF1326 domainFunction unknown [S] 5.38
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.77
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 0.77
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.77
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.77
COG0534Na+-driven multidrug efflux pump, DinF/NorM/MATE familyDefense mechanisms [V] 0.77
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 0.77
COG0728Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)Cell wall/membrane/envelope biogenesis [M] 0.77
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 0.77
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.77
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.77
COG2244Membrane protein involved in the export of O-antigen and teichoic acidCell wall/membrane/envelope biogenesis [M] 0.77
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.77
COG3404Formiminotetrahydrofolate cyclodeaminaseAmino acid transport and metabolism [E] 0.77
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 0.77


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.15 %
UnclassifiedrootN/A43.85 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459021|G14TP7Y01APRVFAll Organisms → cellular organisms → Bacteria → Terrabacteria group505Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100744777All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100744952All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100745541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1123Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100747217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105391944Not Available760Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105393173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria779Open in IMG/M
3300000956|JGI10216J12902_106932931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2226Open in IMG/M
3300000956|JGI10216J12902_120750890Not Available509Open in IMG/M
3300001535|A3PFW1_10369471Not Available566Open in IMG/M
3300002568|C688J35102_119427065Not Available693Open in IMG/M
3300003321|soilH1_10268010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1542Open in IMG/M
3300004081|Ga0063454_100106887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1354Open in IMG/M
3300004114|Ga0062593_100981024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia864Open in IMG/M
3300004156|Ga0062589_100968572Not Available791Open in IMG/M
3300004156|Ga0062589_101474452Not Available667Open in IMG/M
3300004157|Ga0062590_100169201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1530Open in IMG/M
3300004157|Ga0062590_101425580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria690Open in IMG/M
3300004479|Ga0062595_100835960Not Available765Open in IMG/M
3300004643|Ga0062591_100753522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales890Open in IMG/M
3300004643|Ga0062591_100976152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300004643|Ga0062591_101076253Not Available772Open in IMG/M
3300005093|Ga0062594_100774810Not Available881Open in IMG/M
3300005093|Ga0062594_100997867All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300005093|Ga0062594_101354486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria718Open in IMG/M
3300005093|Ga0062594_101516886All Organisms → cellular organisms → Bacteria → Terrabacteria group688Open in IMG/M
3300005093|Ga0062594_101638283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium669Open in IMG/M
3300005168|Ga0066809_10218694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300005332|Ga0066388_106266986Not Available600Open in IMG/M
3300005338|Ga0068868_101073101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium740Open in IMG/M
3300005339|Ga0070660_101440273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300005340|Ga0070689_101768255Not Available563Open in IMG/M
3300005344|Ga0070661_101316390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300005347|Ga0070668_102062447Not Available526Open in IMG/M
3300005356|Ga0070674_101398568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria626Open in IMG/M
3300005366|Ga0070659_100778959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia831Open in IMG/M
3300005456|Ga0070678_100811286Not Available850Open in IMG/M
3300005456|Ga0070678_102181927Not Available525Open in IMG/M
3300005459|Ga0068867_102081313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia537Open in IMG/M
3300005466|Ga0070685_10577516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria806Open in IMG/M
3300005471|Ga0070698_101094394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300005487|Ga0074211_134051Not Available846Open in IMG/M
3300005529|Ga0070741_10019067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11004Open in IMG/M
3300005529|Ga0070741_10034578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6826Open in IMG/M
3300005529|Ga0070741_10079133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3630Open in IMG/M
3300005535|Ga0070684_100101649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2569Open in IMG/M
3300005564|Ga0070664_100825846Not Available867Open in IMG/M
3300005614|Ga0068856_100125818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae2566Open in IMG/M
3300005764|Ga0066903_100666914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1823Open in IMG/M
3300005764|Ga0066903_104453180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria748Open in IMG/M
3300005764|Ga0066903_108578646Not Available520Open in IMG/M
3300005843|Ga0068860_101750843Not Available643Open in IMG/M
3300006038|Ga0075365_10451597All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300006579|Ga0074054_10854755Not Available644Open in IMG/M
3300006581|Ga0074048_12897478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium779Open in IMG/M
3300006755|Ga0079222_10606068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria838Open in IMG/M
3300006755|Ga0079222_11431357Not Available642Open in IMG/M
3300006953|Ga0074063_13147470Not Available559Open in IMG/M
3300009012|Ga0066710_104030028Not Available549Open in IMG/M
3300009098|Ga0105245_10304870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1564Open in IMG/M
3300009147|Ga0114129_11742970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria759Open in IMG/M
3300009148|Ga0105243_10207054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1724Open in IMG/M
3300009177|Ga0105248_11392436All Organisms → cellular organisms → Bacteria → Terrabacteria group793Open in IMG/M
3300009177|Ga0105248_11665692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria723Open in IMG/M
3300010373|Ga0134128_11456989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia754Open in IMG/M
3300010396|Ga0134126_12361860Not Available579Open in IMG/M
3300010400|Ga0134122_10819370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria891Open in IMG/M
3300011119|Ga0105246_12454012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300012019|Ga0120139_1223945Not Available501Open in IMG/M
3300012204|Ga0137374_10478520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria972Open in IMG/M
3300012212|Ga0150985_111334935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium887Open in IMG/M
3300012350|Ga0137372_10045894All Organisms → cellular organisms → Bacteria3898Open in IMG/M
3300012350|Ga0137372_10047421All Organisms → cellular organisms → Bacteria3818Open in IMG/M
3300012358|Ga0137368_10929868Not Available527Open in IMG/M
3300012360|Ga0137375_10920792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria693Open in IMG/M
3300012469|Ga0150984_108353460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1008Open in IMG/M
3300012930|Ga0137407_11715321Not Available599Open in IMG/M
3300012931|Ga0153915_11828956Not Available711Open in IMG/M
3300012951|Ga0164300_11019143Not Available534Open in IMG/M
3300012957|Ga0164303_10073227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1607Open in IMG/M
3300012957|Ga0164303_11284570Not Available541Open in IMG/M
3300012958|Ga0164299_10270242Not Available1027Open in IMG/M
3300012961|Ga0164302_10075297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1778Open in IMG/M
3300012985|Ga0164308_10954924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria759Open in IMG/M
3300012985|Ga0164308_11314047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria657Open in IMG/M
3300012986|Ga0164304_11114216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria632Open in IMG/M
3300012987|Ga0164307_10831834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria737Open in IMG/M
3300012988|Ga0164306_11178962Not Available641Open in IMG/M
3300012989|Ga0164305_10958009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria724Open in IMG/M
3300013297|Ga0157378_13132736Not Available513Open in IMG/M
3300013501|Ga0120154_1158235Not Available507Open in IMG/M
3300014326|Ga0157380_12758288Not Available558Open in IMG/M
3300014968|Ga0157379_11116618Not Available756Open in IMG/M
3300015200|Ga0173480_11113495Not Available528Open in IMG/M
3300015371|Ga0132258_11464958All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1724Open in IMG/M
3300015371|Ga0132258_12955531Not Available1179Open in IMG/M
3300015372|Ga0132256_101563610Not Available770Open in IMG/M
3300015373|Ga0132257_101902441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria766Open in IMG/M
3300015373|Ga0132257_103322621Not Available586Open in IMG/M
3300015374|Ga0132255_103229904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300017947|Ga0187785_10064485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1401Open in IMG/M
3300017947|Ga0187785_10077338Not Available1294Open in IMG/M
3300017947|Ga0187785_10129293Not Available1041Open in IMG/M
3300017974|Ga0187777_10274718Not Available1148Open in IMG/M
3300018061|Ga0184619_10120419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1188Open in IMG/M
3300018433|Ga0066667_12065860All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300019362|Ga0173479_10470419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium626Open in IMG/M
3300025918|Ga0207662_10739980Not Available691Open in IMG/M
3300025919|Ga0207657_10697124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium789Open in IMG/M
3300025926|Ga0207659_11085331Not Available689Open in IMG/M
3300025927|Ga0207687_11398930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium601Open in IMG/M
3300025931|Ga0207644_11467940Not Available573Open in IMG/M
3300025935|Ga0207709_10523112Not Available929Open in IMG/M
3300025941|Ga0207711_11487741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria620Open in IMG/M
3300026078|Ga0207702_11729789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria618Open in IMG/M
3300027821|Ga0209811_10310714Not Available607Open in IMG/M
3300028577|Ga0265318_10057274All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC101457Open in IMG/M
3300028589|Ga0247818_10066689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2317Open in IMG/M
3300028592|Ga0247822_10401468Not Available1068Open in IMG/M
3300028608|Ga0247819_10202663Not Available1068Open in IMG/M
3300028771|Ga0307320_10137332Not Available942Open in IMG/M
3300028809|Ga0247824_10179753Not Available1149Open in IMG/M
3300028889|Ga0247827_10990293Not Available570Open in IMG/M
3300030336|Ga0247826_10721719Not Available775Open in IMG/M
3300031547|Ga0310887_11056056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300031716|Ga0310813_11686169Not Available593Open in IMG/M
3300032770|Ga0335085_10299001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1908Open in IMG/M
3300032828|Ga0335080_10651239Not Available1103Open in IMG/M
3300033004|Ga0335084_11598521Not Available643Open in IMG/M
3300033158|Ga0335077_12102200Not Available522Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil10.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.38%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.08%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.08%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.08%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.08%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.31%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.31%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.31%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.54%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.54%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.77%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.77%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.77%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.77%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459021Litter degradation NP4EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005487Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichmentEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028577Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaGHost-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4NP_039876302170459021Switchgrass, Maize And Mischanthus LitterMLWGLADRFVDEVIEFYGSREQAERALRAVLEDEPDWAGMMQVVPVSVPFDGHWRPKGKPVP
INPhiseqgaiiFebDRAFT_10074477723300000364SoilMLWALSDRFVGEVIQLYRSRELAERALRNVLRDEPEWEGMMEIVPVPIESSHWRPKGRPVQAPRCRHLAR*
INPhiseqgaiiFebDRAFT_10074495223300000364SoilMLWALSDRFVDEVIEVYRTRELAERALRRVLRDEPEWEGMMEIVPVPXESSHWRPKGRPVQAPRCRRGILRN*
INPhiseqgaiiFebDRAFT_10074554123300000364SoilLWALSDRFVDEVIEVYRTRELAERALRRVLRDEPEWEGMMEIVPVPVESSHWRPKGRPVQAPRCRRGILRN*
INPhiseqgaiiFebDRAFT_10074721723300000364SoilMLWALSDRFVDEVIEVYRXRELAERALRRVLQDEPEWEGMMEIVPVPVESSHWRPKGRPVQAPRCRRGILRN*
INPhiseqgaiiFebDRAFT_10539194423300000364SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPGWAGMIXVVPXRVSDPHWRPTGRPVRRPRCRAPV*
INPhiseqgaiiFebDRAFT_10539317323300000364SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPGWAGMIEVVPVRVSDPHWRPTGRPVRRPRCRAPV*
JGI10216J12902_10693293133300000956SoilMLWALADRFVDEVIELYRSRAQAERALRAVLADEPDWAGMIEVVPVEVSDPHWRPKGRRLDRPRCRELV*
JGI10216J12902_12075089023300000956SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVPLVDSHWRPKGKPV
A3PFW1_1036947113300001535PermafrostMLWGLADYFVDEVIETYRSREQAERALARILNDEPEWEGMMEIVPVSPRCTRHWAPTGQPVRKPRCRA*
C688J35102_11942706513300002568SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVPLGDSHWRPKGK
soilH1_1026801023300003321Sugarcane Root And Bulk SoilMLWGLTDHFVDEVIELYKSREQAERALLRVLADEPDWAGMMEVVPVPNDHWQPKGKRVAPPRCRQNF*
Ga0063454_10010688723300004081SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVPLGDSHWRPKGKPVRRPRCSEGFGF*
Ga0062593_10098102413300004114SoilMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG*
Ga0062589_10096857213300004156SoilMLWGLADHFVDEVIGVYRSREQAEKALRAVLADEPDWAGMMEVVPVPNGHWQPKGKPVPRPRCRQVVARP*
Ga0062589_10147445223300004156SoilMLWALSDRFVDEVIELYRSREQAERALRNVLRDEPDWEGMMEIVPVPLAASHWQPKGRPVRAPR
Ga0062590_10016920123300004157SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVTLSDPHWQPKGKLVRRPRCQDPFRG*
Ga0062590_10142558013300004157SoilMLWGLADHFVDEVIGVYRSREQAETALRAVLADEPDWAGMMEVVPVPNGHWQPKGKPVPRPRCRQVVARP*
Ga0062595_10083596023300004479SoilMLWALSDRFVDEVIELYRSREQAERALRNVLRDEPEWEGMMEIVPVPVGSSHWQPKGRPVRAPRCRRGGF*
Ga0062591_10075352223300004643SoilMLWALTDRFVDEMIEVYRSRELAERALRRVLRDEPEWEGMMEIVPVPLESSHWRPKGRPVRAPRCRHGILRN*
Ga0062591_10097615223300004643SoilMLWALSDRFVDEVIELYRSRELAERALRNVLRDEPEWEGMMEVIPYHSQMHWQPKGKPVRAPRCRRWDRL*
Ga0062591_10107625323300004643SoilMLWALSDRFVDEVIEVYRSRELAERALRRVLQDEPEWEGMMEIVPVPVESSHWRPKGRPVQAPRCRRGILRN*
Ga0062594_10077481023300005093SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEIVPVPLGDGHWRPKG
Ga0062594_10099786723300005093SoilMLWALADRFVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPYLPQRPCRPRGRPVRAPRCRRHV*
Ga0062594_10135448613300005093SoilMLWALADRFVDEVIELYRSREQAERALRNVLRDEPEWEGMMEVVPVLRGSSHWSPKGRPVRAPRCRRAF*
Ga0062594_10151688623300005093SoilMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPVPLPDRHWQPRGKRVRRARCRDFLLD*
Ga0062594_10163828313300005093SoilMLWALSDRFVDEVIELYRSRELAERALRNVLRDEPEWEGMMEVVPYHSQMHWQPKGKPVRAPRCRRWDRL*
Ga0066809_1021869413300005168SoilVLWALADRFVGEVIELYRSREQAERALRAVLADEPDWTGMMEVVAVPLSDPHWQPKGKAARRPR
Ga0066388_10626698613300005332Tropical Forest SoilMLWGLADRFVDEVVAVYRSRESAERALHKMLRDEPEWEGMIEVVPVGREPSHWRPRGRRIRAHRCRH*
Ga0068868_10107310123300005338Miscanthus RhizosphereMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG*
Ga0070660_10144027323300005339Corn RhizosphereMLWALADRFVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPYLPHRPCRPRGRPVRAPRCRRHV*
Ga0070689_10176825513300005340Switchgrass RhizosphereMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWAGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFCG*
Ga0070661_10131639013300005344Corn RhizosphereFVDEVIELYRSREQAERALRNVLRDEPEWEGMMEVVPVLRGSSHWSPKGRPVRAPRCRRAF*
Ga0070668_10206244713300005347Switchgrass RhizosphereALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKFVRRPRCQDPFRG*
Ga0070674_10139856813300005356Miscanthus RhizosphereMLWALADRFVDEVIEIYRSREQAERALENVLRDEPEWEGMMEVVPYLPQTHWRPKGRPVRAPRCRRGYRP
Ga0070659_10077895913300005366Corn RhizosphereMLWGLADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG*
Ga0070678_10081128613300005456Miscanthus RhizosphereMLWALADRFVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPVLRGSSHWSPKGRPVRAP
Ga0070678_10218192713300005456Miscanthus RhizosphereRGVTEGKIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKFVRRPRCQDPFRG*
Ga0068867_10208131323300005459Miscanthus RhizosphereKMLWALADRFVDEVIETYRSRELAERALAKVLRDEPEWEGMIEVVPYLPHRPCRPKGRPVRAPRCRRHV*
Ga0070685_1057751623300005466Switchgrass RhizosphereVTEGEIMLWGLADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFGA*
Ga0070698_10109439423300005471Corn, Switchgrass And Miscanthus RhizosphereMLWGLADYFVDEVIEFYASRDEAERALQAVLIDEPEWEGMIKIVPLPLPVPPDWAPKGRPVRRPPCRRF*
Ga0074211_13405123300005487SedimentMLWALSDRFVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPYLPQTHWRPKGRPVRAPRCRRGGF*
Ga0070741_1001906763300005529Surface SoilMLWGLADRFVDEVIELYRSREQAERALRAVLADEPDWAGMIEVVPVAAVRASHWRPKGKPVTRPRCRSF*
Ga0070741_1003457843300005529Surface SoilMLWGLADRFVDEVIELYRSREQAERALRAVLADEPDWAGMIEVVPVSAGRASHWRPKGKPVTRPRCRSF*
Ga0070741_1007913323300005529Surface SoilMLWGLADRFVDEVIELYRSREQAERALRAVLADEPDWAGMIEVVPVSAPRGSHWRPKGKPVRRPRCRAF*
Ga0070684_10010164943300005535Corn RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPLPLPDRHWQPRGKRVRRARCRDFLLD*
Ga0070664_10082584623300005564Corn RhizosphereMLWALADRFVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPVLRGSSHWSPKGRPVRAPRCRRAF*
Ga0068856_10012581843300005614Corn RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPVPLPDRHWQPRGKRVRRARCR
Ga0066903_10066691423300005764Tropical Forest SoilLWALTDRFVDEVIELYRSREQAERALRAVLADEPEWVGMMEVVPVRVSDPHWRPAGKPVRRPRCRDRV*
Ga0066903_10445318023300005764Tropical Forest SoilMLWALADRLVDEVIQVYRSREQAERALHAVLADEPEWTGMMEIVPVPLPEPHWHPRGKRVRRARCRDTLLD*
Ga0066903_10857864623300005764Tropical Forest SoilMLWGLADHFVDEVIGIYRSREQAEYALRKVLTDEPEWEGMMEVVPVSLGPSHWSPKGRPARAPRCRR*
Ga0068860_10175084323300005843Switchgrass RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKFVRRPRCQDPFRG*
Ga0075365_1045159723300006038Populus EndosphereMLWALADRFVDEVIELYRSREQAERALHNVLRDEPEWEGMMEVVPVLRGSSHWSPKGRPVRAPRCRRAF*
Ga0074054_1085475513300006579SoilMQLWGLADRFVDEVVAVYRSRESAERALRTMLRDEPEWEGMIEVVPVPGAFSHWRPKGRRVRVPRCRP*
Ga0074048_1289747823300006581SoilVLWALADRFVGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVPLADPHWQPKGKPVRRPRCQDPFLV*
Ga0079222_1060606823300006755Agricultural SoilMLWGLADHFVDEVIGVYRSREQAEKALRAVLEDEPDWAGMMEVVPVPNGHWQPKGKPVPRPRCRQVVARP*
Ga0079222_1143135713300006755Agricultural SoilMLWGLTDHFVDEVIELYKSREQAERALLRVLADEPDWAGMMEVVPVPNDHWQPKGKRVAPPRCRRNF*
Ga0074063_1314747023300006953SoilMLWALSDRFVDEVIEVYRSRELAERALRRVLQDEPEWEGMMEIVPVPLESSHWQPKGRPVRAPRCRGGILA*
Ga0066710_10403002823300009012Grasslands SoilMLWGLADYFVDEIIEVYRSREQAERALQAVLADEPEWEGMMEVVQVSLPAYCGEWAPRGSPVRRPRCRASC
Ga0105245_1030487013300009098Miscanthus RhizosphereMLWALADRCVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPYLPQRPCRPRGRPVRAPRCRRHV*
Ga0114129_1174297023300009147Populus RhizosphereMLWGLADRFVDEVIELYCSREQAERALDAVLADEPDWAGMMEVVPVARPVERHWRPKGKPVMRPRCRSY*
Ga0105243_1020705413300009148Miscanthus RhizosphereERGNREGETMLWALADHFVDEVIELYRSREQAERALRAVLDDEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG*
Ga0105248_1139243623300009177Switchgrass RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPVPLPDRHWQPRGKRV
Ga0105248_1166569223300009177Switchgrass RhizosphereVTEGEIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKAVRRPRCQDPFRG*
Ga0134128_1145698923300010373Terrestrial SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKLVRRPRCQDPLRG*
Ga0134126_1236186013300010396Terrestrial SoilVTEGEIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKFVRRPRCQDPFRG*
Ga0134122_1081937023300010400Terrestrial SoilMLWGLADHFVDEVVGVYRTREQAEKALRAVLEDEPDWAGMMEVVPVPNGHWQPKGKPVPRPRCRQVFARP*
Ga0105246_1245401213300011119Miscanthus RhizosphereMLWALADRFVDEVIQTYRSREQAERALENVLRDEPEWEGMMEVVPYLPQRPCRPRGRPVRAPRCRRHV
Ga0120139_122394523300012019PermafrostVIHLYRSREQAERALAAVLADEPEWEGMMEIVPVPLPVARDWAPKGRRVRRSCYRRL*
Ga0137374_1047852023300012204Vadose Zone SoilMLWGLVDYFVDEVIAVYRSREQAERALGRVLTDEPDWEGMIEIIQLSVPAYCVDWVPKGSPVRRPRCRTSCQRANE*
Ga0150985_11133493523300012212Avena Fatua RhizosphereVLWALADRFVGEVIALYRSREQAERALRAVLADEPDWTGMMEVVPVPLSDPHWQPKG
Ga0137372_1004589443300012350Vadose Zone SoilMLWGLADHFVDEVIELYRSREQAERALRAVLADEPDWAGMMEVVPVPVALDGHWRPKGRAVWKPRCREFLL*
Ga0137372_1004742133300012350Vadose Zone SoilMLWGLVDYFVDEVIAVYRSREQAERALGRVLTDEPDWEGMIEIVQLSVPAYCVGWVPKGGPVRRPRCRASW*
Ga0137368_1092986813300012358Vadose Zone SoilMLWGLADYFVDEVIELYRSREQAERALRAVLTDEPEWEGMMEVVPVPLPSRGHWAPKGRPAWKPRCRRF*
Ga0137375_1092079223300012360Vadose Zone SoilMLWGLADYFVDEVIELYRSREQAERALRAVLTDEPEWEGMMEIVPVPLPVHRDWAPKGYPVRRPPCRRF*
Ga0150984_10835346023300012469Avena Fatua RhizosphereMLWGLADHFVEEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVPLSDPHWQPKGKPV
Ga0137407_1171532123300012930Vadose Zone SoilMLWGLADHFVDEVVELYRSRELAERALRAVLADEPDWEGMMEVVPVSFRLDGHWQPKGKPVLRPRCRRGF*
Ga0153915_1182895613300012931Freshwater WetlandsMLWGIADRFVDEVIEVYGSREQAERALDEVLRDEPDWEGMIEVVPVPRPPARHWRPKGRPVRLRCSRDYY*
Ga0164300_1101914313300012951SoilVTEGENMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPDWQPKGKAVRRPRCQDPFRG*
Ga0164303_1007322733300012957SoilVTEGKIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPDWQPKG
Ga0164303_1128457013300012957SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKFVRRPRCQDPFRG*
Ga0164299_1027024223300012958SoilVTEGEIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPDWQPKGKAVRRPRCQDPFRG*
Ga0164302_1007529723300012961SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPDWQPKGKAVRRPRCQDPFRG*
Ga0164308_1095492413300012985SoilEGENMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG*
Ga0164308_1131404723300012985SoilMLWALSDRFVDEVIEVYRTRELAERALRRVLRDEPEWEGMMEIVPVPLGSSHWRPKGRPVQAPRCRRGILRN*
Ga0164304_1111421623300012986SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG
Ga0164307_1083183413300012987SoilMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDSHWQRKGKPVRRPRCQDPFRG*
Ga0164306_1117896213300012988SoilVLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFLG*
Ga0164305_1095800913300012989SoilVLWALADRFVGEVIELYRSREQAERALRAVLADEPDWTGMLEVVAAPLSDPHWQPKGRARRPRCQDPFAD*
Ga0157378_1313273613300013297Miscanthus RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVAHADPHWEPKGKAVRRPRCQDPFRG*
Ga0120154_115823523300013501PermafrostMLWGLADHFVDEVIETYRSREQAEQALAKILIDEPEWEGMMEIVPVSPRCTRHWAPTGQPVRKPRCRA*
Ga0157380_1275828823300014326Switchgrass RhizosphereVTEGKIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVTLSDPHWQPKGKLVRRPRCQDPFRG*
Ga0157379_1111661813300014968Switchgrass RhizosphereMLWGLADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEVVPVALSDRHWQPTGKPVRRPRCQDPFRG*
Ga0173480_1111349513300015200SoilMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFCG*
Ga0132258_1146495823300015371Arabidopsis RhizosphereMLWGLADRFVDEVVAVYRSRELAERALNKMLRDEPEWEGMIEVVPVAGQPSHWRPRGRRIRAHRCRH*
Ga0132258_1295553123300015371Arabidopsis RhizosphereMLWGLADRFVDEVVAVYRSRELAERALHKMLRDEPEWEGMIEVVPVAGQPSHWRPKGRRIRAHRCRH*
Ga0132256_10156361013300015372Arabidopsis RhizosphereEVVAVYRSRELAERALHKMLRDEPEWEGMIEVVPVAGQPSHWRPKGRRIRAHRCRH*
Ga0132257_10190244123300015373Arabidopsis RhizosphereVREREAAMLWGLADHFVDEVIELYRSREQAERALRAVLADEPDWAGMMEVVEVPCPFDPHWQPKGK
Ga0132257_10332262123300015373Arabidopsis RhizosphereMLWALSDRFVDEVIEVYRSRELAERALRKVLRDEPEWEGMMEIIPVPLGASHWRPKGRPVPAPRCRRCDL*
Ga0132255_10322990423300015374Arabidopsis RhizosphereMLSALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPVPLPDRHWQPRGKRVRRARCRDFLLD*
Ga0187785_1006448523300017947Tropical PeatlandMQLWGLADRFIDEVVAVYRSRESAERALRTMLRDEPEWEGMIEVVPVPGAFSHWRPKGRRVRASRYRH
Ga0187785_1007733813300017947Tropical PeatlandMQLWGLADRFVDEVVAVYRSRESAERALRTMLRDEPEWEGMIEVVPVPGAFSHWRPRGRRLRACRYRH
Ga0187785_1012929323300017947Tropical PeatlandMQLWGLADRFVDEVVAVYRSRESAERALRTMLRDEPEWEGMIEVVPVPGAFSHWRPRGRRVHACRCRH
Ga0187777_1027471823300017974Tropical PeatlandMLWGLADRFVDEVIEVYRSREQAESARDNVLRDEPEWEGMIEVVPVPAGSRAHWAPRGRPVRRPRCRR
Ga0184619_1012041923300018061Groundwater SedimentMLWGLADYFVDEVISIYRSREQAERALARILRDEPQWEGMMEVVPVCRQACPHWRPRGRSVRAPRCCTVR
Ga0066667_1206586013300018433Grasslands SoilPHRSTVRGRVMLWGLTARFVDEVIEFYASREQAERALQAVLDDEPEWEWMIEVIPLPMPARGDWAPRGRRVRPPRCRR
Ga0173479_1047041923300019362SoilMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQD
Ga0207662_1073998013300025918Switchgrass RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG
Ga0207657_1069712423300025919Corn RhizosphereMLWALADRFVDEVIETYRSREQAERALENVLRDEPEWEGMMEVVPYLPHRPCRPRGRPVRAPRCRRHV
Ga0207659_1108533123300025926Miscanthus RhizosphereMLWALADRFVDEVIELYRSREQAERALHNVLRDEPEWEGMMEVVPVLRGSSHWSPKGRPVRAPRCRRAF
Ga0207687_1139893013300025927Miscanthus RhizosphereGGIMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG
Ga0207644_1146794013300025931Switchgrass RhizosphereTRRSIHTLSEGNGRGIMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPVPLPDRHWQPRGKRVRRARCRDFLLD
Ga0207709_1052311213300025935Miscanthus RhizosphereVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVALSDPHWQPKGKPVRRPRCQDPFRG
Ga0207711_1148774113300025941Switchgrass RhizosphereRQNVQIPRTRALHRAIGSYAERGVTEGEIMLWALADRFVDEVIELYRSREQAERALRAVLADEPDWTGMIEVVPVALSDRHWQPTGKPVRRPRCQDPFRG
Ga0207702_1172978923300026078Corn RhizosphereMLWALADRFVDEVIQLYRSREQAERALRAVLADEPDWTGMIEIVPVPLPDRHWQPRGKRVRRARCRDF
Ga0209811_1031071413300027821Surface SoilLWALADRYVDEVIEFYRSREQAERALRAVLADEPGWTGMMEVVPFPLSDPHWQPKGAPGRRPRCQDPFAD
Ga0265318_1005727423300028577RhizosphereMLWGLADRFVDEVVEIYRSRELAERALHKVLRDEPEWEGMMEVVPVPLASSHWRPKGRPVRAPRCKQ
Ga0247818_1006668933300028589SoilVLWALADRFVGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVPLSDPHWQPKGKPARRPRCQDPFLV
Ga0247822_1040146823300028592SoilVRGVPEGETVLWALADRFVGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVPLSDPHWQPKGKPARRPRCQDPFLV
Ga0247819_1020266313300028608SoilLHQACGSYAVRGVPEGETVLWALADRFVGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVPLSDPHWQPKGKPARRPRCQDPFLV
Ga0307320_1013733213300028771SoilMLWGLADHFVDEVIELYRSREQAERALDNVLNDEPEWEGMIEVVPVPLSSGRRWAPKGRPVRKPRCRR
Ga0247824_1017975313300028809SoilGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVPLSDPHWQPKGKPARRPRCQDPFL
Ga0247827_1099029323300028889SoilGSYAVRGVPEGETVLWALADRFVGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVPLSDPHWQPKGKPARRPRCQDPFLV
Ga0247826_1072171923300030336SoilMLWGLADRFVDEVVAVYRSRELAERALNKMLRDEPEWEGMIEVVPVAGEPSHWRPRGRRIRAHRCRH
Ga0310887_1105605613300031547SoilVLWALADRFVGEVIELYRSREQAERALRAVLVDEPDWTGMMEVVPVALSDPHWQPKGKPARRPRCQDPFLV
Ga0310813_1168616913300031716SoilASLRRLREGVVRGETMLWGLADRFVDEVIELYRSREQAERALRAVLADEPDWTGMMEVVPVSHLGDGHWRPKGRPVRRPRCREIW
Ga0335085_1029900123300032770SoilMLWGLADHFVDEVIELYRSREQAERALDNVLRDEPEWEGMMEVVPVPAEFPAHWAPSGRPVRRPRCRR
Ga0335080_1065123923300032828SoilMLWGLADHFVGEVIELYPSREQAERALDKVLRDEPEWEGMMEVVPIPARFPAHWAPSGRPVRRPRCRR
Ga0335084_1159852123300033004SoilMQLWGLADRFVDEVVAVYRSRELAERALRTMLRDEPEWEGMIEVVPVPGAFSHWRPKGRRVRACCRR
Ga0335077_1210220023300033158SoilDHFVGEVIELYPSREQAERALDKVLRDEPEWEGMMEVVPIPARFPAHWAPSGRPVRRPRCRR


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