NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062735

Metagenome / Metatranscriptome Family F062735

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062735
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 70 residues
Representative Sequence LFAAVSLAIPLSYPSSRWPLLSLPRFGLVVFPFFLALAALTAGRPRAHTAVVACSALFLGIAVVQWALWQWVA
Number of Associated Samples 113
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.23 %
% of genes from short scaffolds (< 2000 bps) 93.85 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.923 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.154 % of family members)
Environment Ontology (ENVO) Unclassified
(26.923 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.846 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.39%    β-sheet: 0.00%    Coil/Unstructured: 38.61%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF02517Rce1-like 26.15
PF13419HAD_2 19.23
PF00801PKD 3.08
PF01497Peripla_BP_2 1.54
PF02577BFN_dom 1.54
PF01817CM_2 0.77
PF12730ABC2_membrane_4 0.77
PF08402TOBE_2 0.77
PF07676PD40 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 26.15
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 26.15
COG0614ABC-type Fe3+-hydroxamate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.54
COG1259Bifunctional DNase/RNaseGeneral function prediction only [R] 1.54
COG4558ABC-type hemin transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.54
COG4592ABC-type Fe2+-enterobactin transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.54
COG4594ABC-type Fe3+-citrate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.54
COG4607ABC-type enterochelin transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.54
COG1605Chorismate mutaseAmino acid transport and metabolism [E] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.92 %
UnclassifiedrootN/A3.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2070309009|GPKNP_GG3DY5401DLUXQAll Organisms → cellular organisms → Bacteria509Open in IMG/M
3300000956|JGI10216J12902_104159086All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300000956|JGI10216J12902_114476973All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300004081|Ga0063454_100984505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales676Open in IMG/M
3300004643|Ga0062591_100794675All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005166|Ga0066674_10307767All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300005177|Ga0066690_10484662All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300005186|Ga0066676_10093426All Organisms → cellular organisms → Bacteria1811Open in IMG/M
3300005186|Ga0066676_10947572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium575Open in IMG/M
3300005186|Ga0066676_10955087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300005187|Ga0066675_11173223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300005294|Ga0065705_10320561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1012Open in IMG/M
3300005329|Ga0070683_101700418All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005332|Ga0066388_108461712All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005436|Ga0070713_101351408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium691Open in IMG/M
3300005441|Ga0070700_101173447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300005450|Ga0066682_10095019All Organisms → cellular organisms → Bacteria1866Open in IMG/M
3300005450|Ga0066682_10931830All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005468|Ga0070707_100877148All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300005468|Ga0070707_101346797All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300005468|Ga0070707_101482303All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300005529|Ga0070741_10034986All Organisms → cellular organisms → Bacteria6762Open in IMG/M
3300005529|Ga0070741_10767665All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005546|Ga0070696_101974610All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005553|Ga0066695_10415549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales832Open in IMG/M
3300005561|Ga0066699_10845718All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300005568|Ga0066703_10423461All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300005587|Ga0066654_10048136All Organisms → cellular organisms → Bacteria1870Open in IMG/M
3300005764|Ga0066903_101072734All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300005892|Ga0075275_1062232All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300005937|Ga0081455_10808880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300005985|Ga0081539_10262663All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300006031|Ga0066651_10705033All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300006032|Ga0066696_10210630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1244Open in IMG/M
3300006042|Ga0075368_10280978All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300006046|Ga0066652_100212857All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300006579|Ga0074054_12132033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria723Open in IMG/M
3300006800|Ga0066660_10500303All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300006804|Ga0079221_10995650All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300006806|Ga0079220_10709582All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300006854|Ga0075425_102261361All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300006854|Ga0075425_102788379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales538Open in IMG/M
3300006880|Ga0075429_100262415All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300009012|Ga0066710_103193494All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300009090|Ga0099827_11164690All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300009100|Ga0075418_11119725All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300009100|Ga0075418_11307854All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300009100|Ga0075418_12034957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300009137|Ga0066709_100182133All Organisms → cellular organisms → Bacteria2736Open in IMG/M
3300009137|Ga0066709_102711826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium660Open in IMG/M
3300009146|Ga0105091_10269972All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300009176|Ga0105242_10528263All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300010041|Ga0126312_10536658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium838Open in IMG/M
3300010044|Ga0126310_10569225All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300010321|Ga0134067_10453406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300010375|Ga0105239_12128409All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300011271|Ga0137393_10914905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium748Open in IMG/M
3300012198|Ga0137364_10106999All Organisms → cellular organisms → Bacteria1977Open in IMG/M
3300012198|Ga0137364_10187802All Organisms → cellular organisms → Bacteria1510Open in IMG/M
3300012201|Ga0137365_11139863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300012356|Ga0137371_10618826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium831Open in IMG/M
3300012358|Ga0137368_10263490All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300012527|Ga0136633_1014053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4211Open in IMG/M
3300012678|Ga0136615_10313097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300012679|Ga0136616_10022183All Organisms → cellular organisms → Bacteria3166Open in IMG/M
3300012680|Ga0136612_10483834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300012930|Ga0137407_10152707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2041Open in IMG/M
3300012948|Ga0126375_11490496All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012958|Ga0164299_11261716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300012985|Ga0164308_12083876All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300013087|Ga0163212_1238895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Desulfovirgula → Desulfovirgula thermocuniculi565Open in IMG/M
3300013297|Ga0157378_11135509All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300013500|Ga0120195_1004596Not Available810Open in IMG/M
3300014254|Ga0075312_1015083All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300014325|Ga0163163_10908315All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300015077|Ga0173483_10618092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium599Open in IMG/M
3300015372|Ga0132256_100374177All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300016319|Ga0182033_11479232All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300017789|Ga0136617_10027476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5077Open in IMG/M
3300018056|Ga0184623_10393388All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300018058|Ga0187766_10678512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium710Open in IMG/M
3300018061|Ga0184619_10337424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium688Open in IMG/M
3300018071|Ga0184618_10056042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1447Open in IMG/M
3300018078|Ga0184612_10149852All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300018433|Ga0066667_12158501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300018481|Ga0190271_11192118All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300018482|Ga0066669_11100855All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300020018|Ga0193721_1088976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales798Open in IMG/M
3300022756|Ga0222622_10614584All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300024331|Ga0247668_1050442All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300025910|Ga0207684_10807432All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300025919|Ga0207657_10526702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium925Open in IMG/M
3300025922|Ga0207646_11764559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300025922|Ga0207646_11782466All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300025923|Ga0207681_10109270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae2009Open in IMG/M
3300025928|Ga0207700_10793156All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300025960|Ga0207651_11590491All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300026118|Ga0207675_100288531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1596Open in IMG/M
3300026118|Ga0207675_101986968Not Available599Open in IMG/M
3300027523|Ga0208890_1080459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300027862|Ga0209701_10648740All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300027866|Ga0209813_10302247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300027882|Ga0209590_10337373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium970Open in IMG/M
3300027882|Ga0209590_10924189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300028705|Ga0307276_10010855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1619Open in IMG/M
3300028715|Ga0307313_10157430All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300028718|Ga0307307_10287134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300028722|Ga0307319_10041082All Organisms → cellular organisms → Bacteria1443Open in IMG/M
3300028744|Ga0307318_10059926All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300028744|Ga0307318_10106869All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300028755|Ga0307316_10258477All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300028787|Ga0307323_10385137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300028799|Ga0307284_10205409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria775Open in IMG/M
3300028811|Ga0307292_10357303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300028814|Ga0307302_10091841All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300028819|Ga0307296_10482021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium679Open in IMG/M
3300028824|Ga0307310_10427363All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300028828|Ga0307312_10496496All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300028878|Ga0307278_10491008All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300028880|Ga0307300_10252551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300031229|Ga0299913_10748382All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300031910|Ga0306923_11286781All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300031911|Ga0307412_10833550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300032002|Ga0307416_103216092All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300032008|Ga0318562_10662020All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300032160|Ga0311301_10713819Not Available1405Open in IMG/M
3300033158|Ga0335077_11949304All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300034066|Ga0335019_0413323All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300034111|Ga0335063_0532718All Organisms → cellular organisms → Bacteria565Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.38%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.62%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand3.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.08%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.54%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.54%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.54%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.54%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.77%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.77%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.77%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.77%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.77%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.77%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2070309009Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005892Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012527Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)EnvironmentalOpen in IMG/M
3300012678Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)EnvironmentalOpen in IMG/M
3300012679Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)EnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013500Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T4.rep2EnvironmentalOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPKNP_039228702070309009SoilLSVPSSRWPLLSLPRFGVAIFPFFLALAWIGGRNPRANAAILGFSGLLLGIFVAQWALWDWVA
JGI10216J12902_10415908623300000956SoilYGLYAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRAHAAVVGLSATFLGIAVAQWALWQWVA*
JGI10216J12902_11424046133300000956SoilLLSLPRFGLVVFPFFLALAWLGGRHARAHAAIVGCSALLLGVFVTQWALWNWVA*
JGI10216J12902_11447697313300000956SoilALSIALPLGVPSERWPLLSLPRFGVVVFPFFLALAWLGRTPRAHAAILGTSALFLGVAVTQWALWQWVS*
Ga0063454_10098450523300004081SoilVVAWRRFGTAYGLFAALSLAIPLSYPSSRWPLLSLPRFGLVVFPFFLALAALTARRPRAHVLVAATSALFLGIAIVQWALWQWVA*
Ga0062591_10079467513300004643SoilPLSMPSSRWPLLSLPRFGLVVFPFFLALAWIGGRRPRANAAIIGSSALLLGVFVTQWALWSWVA*
Ga0066674_1030776723300005166SoilAYGLFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALAAERPRVHTAIVAVSALFLGVAVVQWALWQWVT*
Ga0066690_1048466213300005177SoilPSSRWPLLSLPRFGLVVFPFFLALAWLGSRPRAHAAILSVSALFLGVLAVQWALWQWVA*
Ga0066676_1009342653300005186SoilPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHVRAHVAIVGCSALLLGVFVTQWALWNWVA
Ga0066676_1094757213300005186SoilAIPLSVPSERWPLLSLPRFGLTIFPFFLALALIGGRPRAHTIILGISSLLLGVAVVQWALWQWVA*
Ga0066676_1095508713300005186SoilGAPYGLFASLSLAIPLSFPSSRWPLLSLPRFGLVVFPFFLALAVLGARPRVHTAIVACSALFLGIAVTQWALWQWVA*
Ga0066675_1117322323300005187SoilGLFAAVSLAIPLSFPSSRWPLLSLPRFGLVIFPFFLALAAVTTGRPRLHAGLVVCSSFLLGILVVQWALWQWVA*
Ga0065705_1032056133300005294Switchgrass RhizospherePYGLFAALSLALPLSVPSSRWPLLSLPRFGVVVFPFFLALAWIGGRNPRANAAILGFSGLLLGIFVAQWALWDWVA*
Ga0070683_10170041823300005329Corn RhizosphereLSVPSERWPLLSLPRFGLTIFPFFLALAVLGGRPRSHTAIVAVSSLLLGVSVAQWALWQWVA*
Ga0066388_10846171223300005332Tropical Forest SoilVAWRRFGAPYGLFAAVSLAIPLSYPSARWPLLSLPRFGLVIFPFFLALAALTAGRPRLHALVAATSALFLGIAIVQWSLWQWVA*
Ga0070713_10135140823300005436Corn, Switchgrass And Miscanthus RhizosphereIPLSYPSARWPLLSLPRFGLVIFPFFLALAALTAGRPRAHTLVAATSALFLGIAIVQWALWQWVA*
Ga0070700_10117344723300005441Corn, Switchgrass And Miscanthus RhizosphereLTVLAWKRLGAPYGVFAALSLAIPLSVPADDYPLLSIQRFGLVIFPFFLALATLGSRPRAHLLIVVTSALLLGVTAARWALWQWVA*
Ga0066682_1009501913300005450SoilVWRRFGAPYGLFASLSLAIPLSFPSSRWPLLSLPRFGLVVFPFFLALAVLGARPRVHTAIVACSALFLGIAVTQWALWQWVA*
Ga0066682_1093183023300005450SoilPLSVPSSRWPLLSLPRFGLVIFPFFLALAWLGRNPRTNAAILSLSALLLGVFVTQWALWDWVA*
Ga0070707_10087714823300005468Corn, Switchgrass And Miscanthus RhizospherePYGLFSALSLALPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHPRANAAIVGLSALLLGVYVTQWALWDWVA*
Ga0070707_10134679723300005468Corn, Switchgrass And Miscanthus RhizosphereLFAAVSLAIPLSYPSSRWPLLSLPRFGLVVFPFFLALAALTAGRPRAHTAVVACSALFLGIAVVQWALWQWVA*
Ga0070707_10148230323300005468Corn, Switchgrass And Miscanthus RhizospherePYGLFSALSLALPLSVPSSRWPLLSLPRFGLAVFPFFLALAWIGGRHARANAAITGLSALLLGVFVTQWALWDWVA*
Ga0070741_1003498613300005529Surface SoilRFGAPYGLFAALSLAIPLSVPSSRWPLLSLPRFGLVVFPFFLALAALGGRPRMHTALVAISSMLLGVAIVQWALWQWVA*
Ga0070741_1076766513300005529Surface SoilFAAASLAIPLSLPSDRFPLLSLPRFGLVVFPFFLALALVGERPRAHAAIVATSALLLGASVVQWTLWQWVS*
Ga0070696_10197461023300005546Corn, Switchgrass And Miscanthus RhizosphereLSLPSSRWPLLSLPRFGLVVFPFFLALAALGTRPRAHAAILGVSALFLGVVTVQWALWQWVS*
Ga0066695_1041554913300005553SoilAWRRFGAAYGLFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALAAERPRVHTAIVAVSALFLGVSVVQWALWQWVA*
Ga0066699_1084571813300005561SoilGLFAAASLAIPLSYPSSRWPLLSLPRFGLVVFPFFLALAALTNGRPRLHTALVACSSLLLGIAVVQWALWQWVA*
Ga0066703_1042346123300005568SoilYGLFATLSLAIPLSVPSSRWPLLSIPRFGLTIFPFFLALAVVGGRPRAHTAIVCVSSVLLGVAIVQWALWQWVA*
Ga0066654_1004813643300005587SoilRFGAPYGLFATLSLAIPLSVPSSRWPLLSIPRFGLTIFPFFLALAVVGGRPRAHTAIVCVSSVLLGVAIVQWALWQWVA*
Ga0066903_10107273413300005764Tropical Forest SoilWRLLGPAYGLFCALSLAIPLTLPSSRWPLLSLPRFGLVVFPFFLALAWLGARPRVHAAIVSVSALFLGIAVAQWALWQWVA*
Ga0075275_106223223300005892Rice Paddy SoilAYGLFAAASLAIPLSTPSSRFPLLSLPRFGLVVFPFFLALALVGARPRIHEAIVGASALGLGIVVVQWTLWNWVS*
Ga0081455_1080888023300005937Tabebuia Heterophylla RhizosphereFGAPYGLFAALSLAIPLSVPSERWPLLSIQRFGLVVFPLFMALAVLGSRPRLHTGVVVVSAVLLGVVSAQWALWQWVA*
Ga0081539_1026266313300005985Tabebuia Heterophylla RhizosphereRLLGAPYGLFAALSLALPLSAPSDRWPLLSLPRFGLVVFPFFFALASLGARPRVHDAIVAISAGLLGITIVQWALYQWVA*
Ga0066651_1070503313300006031SoilSDRWPLLSLPRFGLVIFPFFLALAWLSGRASRGHAAILGTSALLLGVFVTQWVLWDWVA*
Ga0066696_1021063013300006032SoilRFGAAYGLFAALSLAIPLSLPSSRWPLLSLPRFGLVVFPFFLALAWLGSRPRAHAAILSVSALFLGVLTVQWALWQWVA*
Ga0075368_1028097813300006042Populus EndosphereGAPYGLFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTGRPRAHTILAATSALLLGIAVVQWALWQWVA*
Ga0066652_10021285743300006046SoilVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTGRPRAHTILAATSALLLGVAVVQWALWQWVA*
Ga0074054_1213203313300006579SoilLSLAIPLSLPSDRWPLLSLPRLGLGVFPFFLALAAIGGRPRAHTAIVSISALFLGVAVVQWALWQWVA*
Ga0066660_1050030333300006800SoilYPSSRWPLLSLPRFGLVVFPFFLALAALTNGRPRLHTAIVGCSSLLLGIAVVQWALWQWVA*
Ga0079221_1099565023300006804Agricultural SoilSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRAHVLVAATSALFLGILVVQWALWQWVA*
Ga0079220_1070958223300006806Agricultural SoilYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRAHVLVAATSAVFLGILVVQWALWQWVA*
Ga0075425_10226136113300006854Populus RhizosphereYGLFAALSLALPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHARAHVAIVGCSAILLGVFVTQWALWDWVA*
Ga0075425_10278837913300006854Populus RhizosphereAWRRFGAAYGLFAALSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHTVLAATSALFLGIAIVQWALWQWVA*
Ga0075429_10026241513300006880Populus RhizosphereWPLLSLPRFGLVVFPLFFALGALGGRSPRVHTAILSCSAILLGVLITQWALWDWVA*
Ga0066710_10319349423300009012Grasslands SoilLSLALPLSVPSDRWPLLSLPRFGLAVFPIFLALAALGAGPRIHEAIVGASALLLGIAIVQWALYQWVA
Ga0099827_1116469013300009090Vadose Zone SoilLAIPLSLPSERWPLLSIPRFGLVIFPFFLALAWLGGRPRAHAAILGCSALLLGVAVVQWALWQWVA*
Ga0075418_1111972523300009100Populus RhizosphereFGAPYGLFAALSLAIPLSVPSERWPLLSIQRFGLVVFPLFMALAVLGSRPRVHTGVVVLSAVLLGVVSAQWALWQWVA*
Ga0075418_1130785413300009100Populus RhizosphereAPYGLFAAMSLAIPLSYPSSRWPLLSLPRFGLVVFPLFFALAALGGRSPRVHTAILSCSAILLGVFVTQWALWDWVA*
Ga0075418_1203495723300009100Populus RhizosphereSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTGRPRAHTILAATSALLLGIAVVQWALWQWVA*
Ga0066709_10018213353300009137Grasslands SoilVPSDRWPLLSLPRFGLAVFPIFLALAALGAGPRIHEAIVGASALLLGIAIVQWALYQWVA
Ga0066709_10271182623300009137Grasslands SoilLSLAIPLSVPSSRWPLLSIPRFGLTIFPFFLALAVVGGRPRAHTAIVCVSSVLLGVAIVQWALWQWVA*
Ga0105091_1026997213300009146Freshwater SedimentWPLLSLPRFGLVVFPFFLALAWLGRNDRMHVGIVAVSALFLGVSVAQWALWQWVA*
Ga0105242_1052826313300009176Miscanthus RhizosphereAALSLALPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHARAHAAIVGCSALLLGVFVTQWALWNWVA*
Ga0126312_1053665823300010041Serpentine SoilFAALSLAIPLSVPSERWPLLSLPRFGLVVFPFFLALAALGERPRVHTPIVVVSATLLGVICAQWALWQWVA*
Ga0126310_1056922523300010044Serpentine SoilVPSERWPLLSLPRFGLVVFPFFMALAWLGRTERPHTAIVAVSALFLGVSVAQWALWQWVA
Ga0134067_1045340613300010321Grasslands SoilAWREFGAPYGLFAALSLALPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHVRAHVAIVGCSALLLGVFVTQWALWNWVA*
Ga0105239_1212840923300010375Corn RhizospherePSSRWPLLSLPRFGLVVFPLFFALAALGGRSPRVHTAILSCSAILLGVFVTQWALWDWVA
Ga0137393_1091490523300011271Vadose Zone SoilRRFGAPYGLFAAVSLAIPLAYPSSRWPLLSLPRFGLVIFPFFLALAALAAGRPRLHTAIVACSALFLGVAVVQWALWQWVA*
Ga0137364_1010699913300012198Vadose Zone SoilFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTEGRPRLQTAVAACSALLLGIAVVQWALWQWVA*
Ga0137364_1018780233300012198Vadose Zone SoilVVAWRRFGAPYGLFAAVSLALPVSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRAHTIVAATSALFLGAAIVQWALWQWVA*
Ga0137365_1113986323300012201Vadose Zone SoilAIPLSYPSERWPLLSLPRFGLVVFPLFMALAALGGRPRAHIAIVSISSLFLGVAVAQWALWQWVA*
Ga0137371_1061882613300012356Vadose Zone SoilALSLAIPLSLPSSRWPLLSLPRFGFVVFPFFLALAWLGGRPRAHAAILSVSALFLGVVTVQWALWQWVG*
Ga0137368_1026349033300012358Vadose Zone SoilVPSERWPLLSLPRFGLVVFPFFLALAVLGERPRVHNAIVGASAMLLGIVIVQWVLYQWVA
Ga0136633_101405393300012527Polar Desert SandPLSFPSDEQPLLSMSRFGLVVFPLVLALAALGARARVHDAIVAVSSLLLGVAVVQWALWQWVA*
Ga0136615_1031309713300012678Polar Desert SandRRFGAPYGLFALVSLAIPLSFPSERWPLLSMSRFGLVLFPLLLVLATLGSRPRLHSALTSVSAALLGIAVVQWALWQWVA*
Ga0136616_1002218313300012679Polar Desert SandSVPTERWPLLSLPRFGLVIFPFFLALAAIARKPRVHTAVLSISSVLLGVAVVQWALWQWVA*
Ga0136612_1048383413300012680Polar Desert SandPYALFALVSLALPLSFPSERWPLLSVSRFGLVLFPLLLVLAELGARPRLHTAWTAVSAALLGLAVVQWALWQWVA*
Ga0137407_1015270713300012930Vadose Zone SoilIPLAYPSSRWPLLSLPRFGLVVFPFFLALAAVTTAKPRLHTAVVACSALFLGIAVVQWALWQWVA*
Ga0126375_1149049613300012948Tropical Forest SoilLSVPSERWPLLSLPRFGLVVFPFFLALAWLGRSPRVHTTVVAVSALFLGISVAQWALWQWVS*
Ga0164299_1126171623300012958SoilAPYGLFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHVLLAATSALFLGIAIVQWALWQWVA*
Ga0164308_1208387623300012985SoilAWREFGAPYGLFAALSLTLPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHARAHAAIIGCSAILLGVFVTQWALWNWVA*
Ga0163212_123889513300013087FreshwaterVLIPVVWRRLGAPYGLFALVSIAIPLSVPSSRWPLLSLPRFGLVVFPFFLALAVVGRRPRAHTAIVTVSALLLGVVTVQWA
Ga0157378_1113550923300013297Miscanthus RhizospherePSSRWPLLSLPRFGLVTFPFFLALAWVGGRNPRAHAAILGFSGLLLGIFVAQWALWDWVA
Ga0120195_100459613300013500TerrestrialAVIGLALPLSVPSSSWPLEAMPRFGLVVFPFFLALAWIGRSERAHTGIVAVSALLLGVSVAQWALWQWVA*
Ga0075312_101508313300014254Natural And Restored WetlandsAWRRFGAPYGLFALVSLAIPLALPAEDFPLLSMSRFGLVVFPLVLALAALTTRPRVHEAVVAVSSLLLGIGVVQWALWQWVA*
Ga0163163_1090831513300014325Switchgrass RhizosphereTRWPLLSLPRFGLVIFPFFLALAWLSGRAPRAHAAILGTSAVLLGVFVTQWALWDWVA*
Ga0173483_1061809223300015077SoilYGLFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTGRPRAHTILAATSALLLGIAVVQWALWQWVA*
Ga0132256_10037417743300015372Arabidopsis RhizosphereVPSERWPLLSLPRFGLAVFPFFLALAWLGRSPRVHTAVVAVSALFLGISVAQWALWQWVS
Ga0182033_1147923213300016319SoilPSSRWPLLSLPRFGLVIFPLFLSLAWLGGRRANANTAILATSAALLGVFVTQWALWDWVA
Ga0136617_10027476103300017789Polar Desert SandAIPLSFPSERWPLLSLSRFGLVLFPVLLVLAALGARPRAHAAITAVSAALLGVAVVQWALWQWVA
Ga0184623_1039338813300018056Groundwater SedimentSYPSTRWPLLSLPRFGLVIFPFFLALAALTADRPRAHNAVVACSALLLGVAVVQWALWQWVA
Ga0187766_1067851223300018058Tropical PeatlandFAAASLAIPLSFPSSRWPLLSLPRFGLVVFPFFLALAALSTGRPRLHTAIVACSSLVLGIAITQWALWQWVS
Ga0184619_1033742423300018061Groundwater SedimentFGACYGIFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTDRPRAHTAVVAGSAVFLGVAVAQWALWQWVA
Ga0184618_1005604213300018071Groundwater SedimentAPYGLFSAVSLAIPLSVPSERWPLLSIQRFGLVVFPLFMALALIGSRPRVHTAVVVVSAVFLGVVSAQWALWQWVA
Ga0184612_1014985213300018078Groundwater SedimentLAIPLSVPSESWPLLSLPRFGLVVFPFFLALAWLGRDPRAHTAIVAVSALLLGVALTQWALWQWVA
Ga0066667_1215850123300018433Grasslands SoilVVAWRRFGAAYGLFAAISLAIPLSYPSSRWPLLSLPRFGLVIFPYFLALAALAAERPRVHTAIVAGSTLFLGVAVVQWALWQWVA
Ga0190271_1119211813300018481SoilVSLAIPLSFPAERFPLLSMSRFGLVVFPLVLALAALGARRRLHEPIVAVSALLLGVAVVQWALWQWVA
Ga0066669_1110085523300018482Grasslands SoilPLSYPSSRWPLLSLPRFGLVIFPLFLALAIVGRRLRVHTAIVASSAVFLGIAVTQWALWQWVA
Ga0193721_108897613300020018SoilGLFSALSLAIPLSYPSERWPLLSLPRFGLVVFPLFMALAAIGGRPRAHVAIVSISSVFLGVAVVQWALWQWVA
Ga0222622_1061458423300022756Groundwater SedimentSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHTAIAACSALLLGIAIVQWALWQWVA
Ga0247668_105044223300024331SoilSTRWPLLSLPRFGLVIFPFFLALAWLSGRAPRAHAAILGTSAVLLGVFVTQWALWDWVA
Ga0207684_1080743213300025910Corn, Switchgrass And Miscanthus RhizosphereLAVIAWRELGAPYGLFSALSLALPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHPRANAAIVGLSALLLGVYVTQWALWDWVA
Ga0207657_1052670223300025919Corn RhizosphereVPSERWPLLSIPRFGLTIFPFFLALAVIGRRPRAHTAILCVSSLLLGVAVVQWALWQWVA
Ga0207646_1176455923300025922Corn, Switchgrass And Miscanthus RhizospherePLSIPSSRWPLLSLPRFGLVVFPFFLALAALGSRPRAHAAILSVSAVFLGLATVQWALWQWVS
Ga0207646_1178246623300025922Corn, Switchgrass And Miscanthus RhizosphereLFAAVSLAIPLSYPSSRWPLLSLPRFGLVVFPFFLALAALTAGRPRAHTAVVACSALFLGIAVVQWALWQWVA
Ga0207681_1010927033300025923Switchgrass RhizosphereAAIGLALPLSVPSERWPLLSLPRFGLVLFPLVLALAVEGRRPRVHTAIVAVSSMLLGVLVVQWALWQWVA
Ga0207700_1079315623300025928Corn, Switchgrass And Miscanthus RhizosphereAPYGLFAAISLAIPLSYPSARWPLLSLPRFGLVIFPFFLALAALTAGRPRAHTLVAATSALFLGIAIVQWALWQWVA
Ga0207651_1159049113300025960Switchgrass RhizosphereLSTPSTRWPLLSLPRFGLVIFPFFLALAWLSGRAPRAHAAILGTSAVLLGVFVTQWALWDWVA
Ga0207675_10028853113300026118Switchgrass RhizosphereSVPSERWPLLSIPRFGLTIFPFFLALAVIGRRPRAHTAILCVSSLLLGVAVVQWALWQWV
Ga0207675_10198696823300026118Switchgrass RhizosphereLPLSMPSSRWPLLSLPRFGLVVFPFFLALAWIGGRRPRANAAIIGSSALLLGVFVTQWALWSWVA
Ga0208890_108045923300027523SoilALSLAIPLSMPSDRWPLLSLPRLGLGVFPFFLALAAVGGRPRAHTAIVSISALFLGVAVVQWALWQWVA
Ga0209701_1064874023300027862Vadose Zone SoilVLSLAIPLSVPSSRWPLLSLPRFGLAIFPFFLALAVVGGKSPRAHTAIVGLSALFLGVFVTQWALWSWVA
Ga0209813_1030224713300027866Populus EndosphereAPYGLFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTGRPRAHTILAATSALLLGIAVVQWALWQWVA
Ga0209590_1033737333300027882Vadose Zone SoilSLAIPLSVPSSRWPLLSLPRFGLAIFPFFLALAVVGGKSPRAHTAIVGLSALFLGVFVTQWALWSWVA
Ga0209590_1092418913300027882Vadose Zone SoilLAIPLSLPSERWPLLSIPRFGLVIFPFFLALAWLGGRPRAHAAILGCSALLLGVAVVQWALWQWVA
Ga0307276_1001085533300028705SoilALSLAIPLSYPSERWPLLSLPRFGLVVFPLFMALAAIGGRPRAHVAIVSISSVFLGVAVVQWALWQWVA
Ga0307313_1015743013300028715SoilPYGLFAALSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHTAIAACSALLLGIAIVQWALWQWVA
Ga0307307_1028713413300028718SoilLSLAIPLSYPSERWPLLSLPRFGLVVFPLFMALAAIGGRPRAHVAIVSISSVFLGVAVVQWALWQWVA
Ga0307319_1004108213300028722SoilSALSLAIPLSYPSERWPLLSLPRFGLVVFPLFMALAAIGGRLRAHVAIVSISSVFLGVAVVQWALWQWVA
Ga0307318_1005992633300028744SoilLSLAIPLSVPSERWPLLSLPRFGLVVFPFFLALAALGPRWQTPIVVVSATFLGVVCVQWALWQWVA
Ga0307318_1010686923300028744SoilVPSHRWPLLSLPRFGLVLFPCFLALATLGGRPRAHTAILVVSSVMLGVAVTQWALWQWVA
Ga0307316_1025847713300028755SoilAPYGLFAALSLALPLSVPSSRWPLLSLPRFGLVVFPFFLALAWLGGRHARAHAAIAGCSAILLGVFVTQWALWNWVA
Ga0307323_1038513723300028787SoilGIFAAVSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTTDRPRAHTAVVAGSAVFLGVAVAQWALWQWVA
Ga0307284_1020540923300028799SoilIPLSYPSSRWPLLSLPRFGLVIFPLFVALAAVTANRPRLHTGVVACSSVFLGVTVVQWALWQWVA
Ga0307292_1035730313300028811SoilVTLAIPLAYPSARWPLLSLPRFGLVIFPFFLALAAVTAGKPRLHTAVVACSALFLGVAVVQWALWQWVA
Ga0307302_1009184113300028814SoilIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHTAITACSALLLGIAIVQWALWQWVA
Ga0307296_1048202123300028819SoilLSVPSERWPLLSIPRFGLTIFPFFLALAVIGRRPRAHTAILCVSSLLLGVAVVQWALWQWVA
Ga0307310_1042736313300028824SoilWRRFGTPYGLFAALSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHTVIAASSALLLGIAIVQWALWQWVA
Ga0307312_1049649613300028828SoilLSLAIPLSYPSSRWPLLSLPRFGLVIFPFFLALAALTAGRPRLHTAITACSALLLGIAIVQWALWQWVA
Ga0307278_1049100813300028878SoilSLAIPLSYPSERWPLLSLPRFGLVVFPLFMALAALGGRPRAHVAIVSISSLFLGVAVAQWALWQWVA
Ga0307300_1025255123300028880SoilYPSSRWPLLSLPRFGLVVFPLFFGLAAVTATRPRLHTAVVACSGLFLGVAVVQWALWQWV
Ga0299913_1074838213300031229SoilAALAWRRFGAPYGVFALASLAIPLSFPAERFPLLSMSRFGLVVFPLVLALAALGARQRLHEAIVAVSSLLLGVAVVQWALWQWVA
Ga0306923_1128678123300031910SoilEFGAPYGLFAALSLALPLSIPSSRWPLLSLPRFGLVVFPFFLALAWIGGRHARAHVAIVGCSAMLLGVFVTQWALWDWVA
Ga0307412_1083355013300031911RhizosphereRLLGAPYGLFAAVGLAVPLSVPSDRWPLLSLPRFGLVLFPVFLALAVIGARPRAHAAIVGVSAVMLGVAVAQWATWQWVA
Ga0307416_10321609223300032002RhizosphereLSFPSERWPLLSMSRFGLVLFPVLLVLAALGSRPRAHAAITAVSATLLGVAVVQWALWQWVA
Ga0318562_1066202023300032008SoilCVTNTPSSRWPLLSLPRFGLVIFPLFLSLAWLGGRRANANTAILATSAALLGVFVTQWALWDWVA
Ga0311301_1071381913300032160Peatlands SoilSVPSSRWPLWSIPRFGLTLFPIFLALAIVGARPRTHTAILAISAVTLGIAVSQWAQWQWV
Ga0335077_1194930423300033158SoilIPLSFPSSRWPLLSLPRFGLVIFPFFLALAALSTGRPRLHTAIVACSSLVLGIAITQWALWQWVS
Ga0335019_0413323_3_2273300034066FreshwaterYGLFALVSIAIPLSVPSSRWPLLSLPRFGLVVFPFFLALAVVGRRPRAHTAIVTVSALLLGVVTVQWALWQWVA
Ga0335063_0532718_1_2223300034111FreshwaterGLFALVSIAIPLSVPSSRWPLLSLPRFGLVVFPFFLALAVVGRRPRAHTAIVTVSALLLGVVTVQWALWQWVA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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