Metagenome Family F062668

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062668
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	89 residues
Representative Sequence	MLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Number of Associated Samples	106
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.69 %
% of genes near scaffold ends (potentially truncated)	34.62 %
% of genes from short scaffolds (< 2000 bps)	87.69 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.615 % of family members)
Environment Ontology (ENVO)	Unclassified (26.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.90% β-sheet: 3.39% Coil/Unstructured: 62.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00294	PfkB	42.31
PF00248	Aldo_ket_red	19.23
PF13714	PEP_mutase	13.85
PF00196	GerE	6.15
PF13374	TPR_10	1.54
PF13847	Methyltransf_31	1.54
PF00528	BPD_transp_1	1.54
PF13191	AAA_16	0.77
PF07992	Pyr_redox_2	0.77
PF04545	Sigma70_r4	0.77
PF00211	Guanylate_cyc	0.77
PF12833	HTH_18	0.77
PF13683	rve_3	0.77
PF00578	AhpC-TSA	0.77
PF10417	1-cysPrx_C	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.23 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.77 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	60.77 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	55.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.77 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.77 %
Unclassified	root	N/A	0.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	55.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.77 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Unclassified	root	N/A	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16483622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig1237481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300000955\|JGI1027J12803_102911040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300000956\|JGI10216J12902_101614497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300000956\|JGI10216J12902_103813996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300000956\|JGI10216J12902_107122318	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300000956\|JGI10216J12902_112854584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300001686\|C688J18823_10657767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300002568\|C688J35102_120247450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300002568\|C688J35102_120534286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1154	Open in IMG/M
3300003319\|soilL2_10193174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1064	Open in IMG/M
3300004081\|Ga0063454_101844946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300004114\|Ga0062593_100680496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	999	Open in IMG/M
3300004153\|Ga0063455_100266404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	911	Open in IMG/M
3300004153\|Ga0063455_100989124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300004463\|Ga0063356_100207887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2318	Open in IMG/M
3300004479\|Ga0062595_101050399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300004479\|Ga0062595_101670801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300004643\|Ga0062591_102284412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005093\|Ga0062594_100108754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1684	Open in IMG/M
3300005093\|Ga0062594_101903206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300005093\|Ga0062594_102348725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300005167\|Ga0066672_10161071	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300005171\|Ga0066677_10357666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300005175\|Ga0066673_10046007	All Organisms → cellular organisms → Bacteria	2179	Open in IMG/M
3300005176\|Ga0066679_10668334	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005184\|Ga0066671_10389968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300005294\|Ga0065705_10612293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300005467\|Ga0070706_100719921	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005535\|Ga0070684_100449978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1190	Open in IMG/M
3300005546\|Ga0070696_100551015	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005560\|Ga0066670_10303895	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005575\|Ga0066702_10153618	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300005576\|Ga0066708_10111824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1637	Open in IMG/M
3300005764\|Ga0066903_101527265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300006028\|Ga0070717_10411610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300006031\|Ga0066651_10129251	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300006032\|Ga0066696_10193730	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300006046\|Ga0066652_100266643	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300006046\|Ga0066652_101300050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300006755\|Ga0079222_10021836	All Organisms → cellular organisms → Bacteria	2584	Open in IMG/M
3300006755\|Ga0079222_10312802	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300006806\|Ga0079220_10629042	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300006954\|Ga0079219_10319292	Not Available	976	Open in IMG/M
3300009012\|Ga0066710_103180393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300009137\|Ga0066709_100029586	All Organisms → cellular organisms → Bacteria	5772	Open in IMG/M
3300009137\|Ga0066709_102503322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300009137\|Ga0066709_102752587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300009147\|Ga0114129_10204235	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2674	Open in IMG/M
3300009162\|Ga0075423_11727820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300010044\|Ga0126310_10276014	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300010044\|Ga0126310_10393350	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300010045\|Ga0126311_10821769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300010321\|Ga0134067_10330093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300010364\|Ga0134066_10072375	All Organisms → cellular organisms → Bacteria → Terrabacteria group	941	Open in IMG/M
3300010396\|Ga0134126_12618080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300010398\|Ga0126383_10021804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4924	Open in IMG/M
3300012198\|Ga0137364_10410920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013	Open in IMG/M
3300012200\|Ga0137382_10090103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2006	Open in IMG/M
3300012204\|Ga0137374_10004376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16832	Open in IMG/M
3300012204\|Ga0137374_10214001	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300012204\|Ga0137374_10828714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300012206\|Ga0137380_10024609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5542	Open in IMG/M
3300012209\|Ga0137379_10721062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300012209\|Ga0137379_10936206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300012212\|Ga0150985_112250387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1561	Open in IMG/M
3300012349\|Ga0137387_10514011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300012356\|Ga0137371_10098314	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300012358\|Ga0137368_10212981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1364	Open in IMG/M
3300012360\|Ga0137375_10568797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300012469\|Ga0150984_120766901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1471	Open in IMG/M
3300012951\|Ga0164300_10277188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300012951\|Ga0164300_11089510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300012955\|Ga0164298_10235155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1095	Open in IMG/M
3300012958\|Ga0164299_10073008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1693	Open in IMG/M
3300012960\|Ga0164301_10187314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1306	Open in IMG/M
3300012977\|Ga0134087_10178686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300012984\|Ga0164309_11211152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300012987\|Ga0164307_10399019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013	Open in IMG/M
3300012989\|Ga0164305_10067862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	2167	Open in IMG/M
3300013307\|Ga0157372_11739048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300014497\|Ga0182008_10841686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300015372\|Ga0132256_103275496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300015373\|Ga0132257_100006661	All Organisms → cellular organisms → Bacteria	11229	Open in IMG/M
3300018051\|Ga0184620_10138495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300018054\|Ga0184621_10004131	All Organisms → cellular organisms → Bacteria	3889	Open in IMG/M
3300018066\|Ga0184617_1019460	All Organisms → cellular organisms → Bacteria → Proteobacteria	1490	Open in IMG/M
3300018468\|Ga0066662_10553386	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300019875\|Ga0193701_1019530	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300024245\|Ga0247677_1023323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300025910\|Ga0207684_10433577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1129	Open in IMG/M
3300025928\|Ga0207700_10554077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300025929\|Ga0207664_10439388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300025939\|Ga0207665_10256789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1293	Open in IMG/M
3300026300\|Ga0209027_1056292	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300026306\|Ga0209468_1048805	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1439	Open in IMG/M
3300026316\|Ga0209155_1094448	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300026317\|Ga0209154_1122644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300026325\|Ga0209152_10466326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300026548\|Ga0209161_10425455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300026550\|Ga0209474_10302309	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300026552\|Ga0209577_10428437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300027765\|Ga0209073_10469883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300027775\|Ga0209177_10375231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300028711\|Ga0307293_10114578	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300028713\|Ga0307303_10134977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300028716\|Ga0307311_10186762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300028720\|Ga0307317_10031985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1645	Open in IMG/M
3300028755\|Ga0307316_10188506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300028755\|Ga0307316_10247708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300028768\|Ga0307280_10282068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300028787\|Ga0307323_10122380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300028796\|Ga0307287_10284412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300028807\|Ga0307305_10002738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7297	Open in IMG/M
3300028810\|Ga0307294_10251289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300028811\|Ga0307292_10218784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300028814\|Ga0307302_10071121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1638	Open in IMG/M
3300028824\|Ga0307310_10005135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4957	Open in IMG/M
3300028824\|Ga0307310_10047570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1782	Open in IMG/M
3300028824\|Ga0307310_10443627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300028828\|Ga0307312_10374245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300028828\|Ga0307312_10647091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300028828\|Ga0307312_11133817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300028878\|Ga0307278_10002775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8584	Open in IMG/M
3300028881\|Ga0307277_10142122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300028881\|Ga0307277_10143905	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300028885\|Ga0307304_10583522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300031938\|Ga0308175_101349070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300032205\|Ga0307472_101384037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300032205\|Ga0307472_102642314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.08%
Host-Associated	Host-Associated	6.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.77%
Plants	Host-Associated → Plants	6.92%
Aquatic	Environmental → Aquatic	2.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.62%
Sediment	Environmental → Aquatic → Sediment	2.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.31%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.92%
Loam	Environmental → Terrestrial → Soil → Loam	13.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.23%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.31%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03872600	2088090014	Soil	MLIFRTPPLSFVLFLLVMIGIGAAVGHLVNAAGIAAFCFFVASIDPKPAWNFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRKLPDLKN
KansclcFeb2_06783470	2124908045	Soil	MLRFRKPPRSFVAFLLGVVGIGVFTRHEVDAAGFAAFCFFVASIDPKPAWRFWYGKPGSQYDGRRWRFNSWQRVGATSPKEIRDLPDLRN
JGI1027J12803_1029110401	3300000955	Soil	LLVMIGIGAAVGHLVNAAGIAAFCFFVASIDPKPAWNFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRKLPDLKN*
JGI10216J12902_1016144972	3300000956	Soil	MLRFRKPPLSLVLFLLSVIGVGAAVGHFVNALGLVVFFFFVASIDPKPAWKFWFGKPGNQYNGKGWAFNSYQRVGATSPKEIRELPKLL
JGI10216J12902_1038139961	3300000956	Soil	MLRFRKPPRSFVAFLLGVVGIGVFTRHEVDAAGFAVFCFFVASIDPKPAWKFWYGKPGSQYDGRGWRFNSWQRVGATSPKEIRDLPDLRN*
JGI10216J12902_1071223182	3300000956	Soil	MLRFRRPPRSFVVFLLLVVAIGAAFGHVVNAAGLAAFFFFIASIEAKPAWKFWYGKQGSQYDGRGWRFNSWQRVDVTSPKDLRKLPDLRN*
JGI10216J12902_1128545841	3300000956	Soil	MLRFRKPPRSFVAFLLGVIGIGAFTRHEVDATGFAAFCFFVASIDPKPAWRFWYGKPGSQYDGRRWRFNSWQRVGATSPKEIRDLPDLRN*
C688J18823_106577671	3300001686	Soil	MLRFRKPPRSLLCFLLAVIAIGAAVGHLVNAAGFAAFFFFVAGIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMREAPDLRN*
C688J35102_1202474501	3300002568	Soil	MLRFRKPPLSLVVFLLTVVAIGALVGHLVNAVGLAAFFFFVAGIDPKPAWTFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQAPDLKN*
C688J35102_1205342862	3300002568	Soil	MLRFRKPPRSLILFLFAVVAIGAAFGHLINALGFAAFFFFVAGIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQSPDIRN*
soilL2_101931742	3300003319	Sugarcane Root And Bulk Soil	MLRFRKPPRSFVCFLLVVVAVGVALGYPIDAVGVALFFFFVAAIDPKPAWKFWYGKPGNQYDGKGWAFNSYQRVGATSPKEIRELPKLR*
Ga0063454_1018449461	3300004081	Soil	MLRFRKPPLSLVCFLIAVVGIGAAFGHLINALGLAAFFFFVASIDAKPAWKFWYGKPGNQYNGRGWAFCSWQRVGATSPKEIRDLPNIKNN*
Ga0062593_1006804962	3300004114	Soil	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDAAGIAAFCFFVAAIDPKPAWKFWYGKPGSQYDGKGWRFNSWQRVGATSPKEIRDLPDLKN*
Ga0063455_1002664042	3300004153	Soil	MLRFRKPPRSLLCFLLAVIAIGAAVGHLVNAAGFAAFFFFVAGIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDLRN*
Ga0063455_1009891241	3300004153	Soil	MLRFRKPPVSLLCFLLAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRLSSSQRVGITSPKEMRQAPDIKNL*
Ga0063356_1002078873	3300004463	Arabidopsis Thaliana Rhizosphere	MLRFRRPPRSFVVFLVAVVGIGAAVGHLVNALGLAAFFFFVAGIDPKPAWKFWYGKQGSQYDGRGWRFNSWQRVDVTSPKELRRLPDLKN*
Ga0062595_1010503991	3300004479	Soil	MLRFRKPPRSLILFLVAVIAIGAAFGHLVNAAGFAAFFFYVAAIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDIRN*
Ga0062595_1016708011	3300004479	Soil	MLRFRKPPLSFVCFLLVVVGIGAAIGHTINALGLAAFFFFVASIEPKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELPKLHK*
Ga0062591_1022844122	3300004643	Soil	MLIFRRPPLSFVLFLLAMIGIGAAVGHLVNAAGIATFCFFVASIDPKPAWNFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRKLP
Ga0062594_1001087542	3300005093	Soil	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGVAFFCFFIASIDPKPAWKFWYGKPGTHDDGRAYGRFNSWQRVGATSPKEIRKLPDIRN*
Ga0062594_1019032061	3300005093	Soil	VLRFRKPPRSLICFLIAVIAIGAAFGNLVNAAGFAAFFFYVAAIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDLRN*
Ga0062594_1023487251	3300005093	Soil	LRFRKPPLSFVCFLLAVVGVGAAFGHTINALGLAAFFFFVASIEAKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELPKLHK*
Ga0066672_101610712	3300005167	Soil	MLRFRRPPRSFVVFLLVLLAIGGAVGHIVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRVYGRFNSHQRVSATSPKEIRRLPNIRD*
Ga0066677_103576662	3300005171	Soil	MLRFRRPPRSFVVFLLVLLAIGGAVGHIVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRVYGRFNSHQRVSATSPKEIRGLPKIRD*
Ga0066673_100460072	3300005175	Soil	MLRFRRPPRSFVIFLLAVVGVGAALGHVVNAAGIAVFFFFIAGIDPKPAWKFQFGKPGTHDDGRIYGRFNSWQRVGATSPKEIRRLPNIRD*
Ga0066679_106683342	3300005176	Soil	MLRFRRPPKSFVVFLLVLLAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSHQRVSATSPKELRRLPNIRD*
Ga0066671_103899682	3300005184	Soil	MLRFRKPPVSLLCFLLAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPSWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDLRN*
Ga0065705_106122932	3300005294	Switchgrass Rhizosphere	MLIFRKPPLSFVLFLLAMIGIGAAVGHLVNAAGIAAFCFFVASIDPKPAWNFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRKLPDLKN*
Ga0070706_1007199212	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLRFRKPPLSFVCFLLAVVGVGAAFGHTINALGLAAFFFFVASIEAKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELPKLHK*
Ga0070684_1004499781	3300005535	Corn Rhizosphere	GVSFDMLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGVAFFCFFIASIDPKPAWKFWYGKPGTHDDGRAYGRFNSWQRVGATSPKEIRKLPDIRN*
Ga0070696_1005510152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLRFRKPPLSFVCFLLAVVGVGAAFGHTINALGLAAFFFFVASIEAKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELP
Ga0066670_103038952	3300005560	Soil	MLRFRRPPRSFVVFLLVLLAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSHQRVSATSPKEIRGLPKIRD*
Ga0066702_101536183	3300005575	Soil	MLRFRRPPKSFVVFLLVLLAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSHQRVSATSPK
Ga0066708_101118243	3300005576	Soil	LRFRRPPRSFVVFLLVLLAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSHQRVSATSPKEIRGLPKIRD*
Ga0066903_1015272652	3300005764	Tropical Forest Soil	MLRFRKPPRSFVAFLLGVIGVGVFTDHVVDAYGIAAFCFFVAAIDAKPAWKFWYGKPGSQYDGRGWRLTSHQRVGATSPKEIRELPKLLK*
Ga0070717_104116102	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLRFRKPPRSLIVFLVAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWYDKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDLRN*
Ga0066651_101292512	3300006031	Soil	MLRFRKPPLSLVCFLVAVVAIGTAFGHLVNALGFAAFFFFVAGIDPKPAWKFWFGKPGDQYKGGGWAFSSHQRVGATSPKEIRDLPDLKH*
Ga0066696_101937302	3300006032	Soil	MLRFRRPPRSFVIFLLAVVGVGAAFGHVVNAAGIAVFFFFIAGIDPKPAWKFQFGKPGTHDDGRIYGRFNSWQRVGATSPKEIRRLPNIRD*
Ga0066652_1002666432	3300006046	Soil	MLRFRRPPRSFVIFLLAVVGVGAALGHVVNAAGIAVFFFFIAGIDPKPAWKFQFGKPGTHDDGRIYGRFNSWQRVGATSPKEIRRFPNIRD*
Ga0066652_1013000501	3300006046	Soil	MLRFRRPPRSFVVFLLGVIGLGVLTRHAVDAVGIAAFCFFVAAIDPKPAWKFWYGKPGNQYDGRGWRFNSWQRVGATSPKE
Ga0079222_100218362	3300006755	Agricultural Soil	MLRFRKPPRSLLLFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPSWKFWFGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQSPNIRD*
Ga0079222_103128022	3300006755	Agricultural Soil	MLRLRKPPLSFVIFLAAVVAIGAGIGHFVNALGLAAFCFFVASIDAKPSWNFWYGKPGNQYNGRGWAFNSYQRVGATSPKEIRELPKLLK*
Ga0079220_106290422	3300006806	Agricultural Soil	MLRFRKPPLSFVIFLSAIVAIGAVIGHVVNALGLAAFCFFVASIDAKPAWKFWFGKPGNQYNGRGWAFNSYQRVGATSPKEIRELPKLLK*
Ga0079219_103192922	3300006954	Agricultural Soil	FLAAVVAIGAGIGHFVNALGLAAFCFFVASIDAKPSWNFWYGKPGNQYNGRGWAFNSYQRVGATSPKEIRELPKLLK*
Ga0066710_1031803931	3300009012	Grasslands Soil	MLRFRRPPRSFVVFLFVLLAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSHQRVSATSPKEIRGLPKIRD
Ga0066709_1000295862	3300009137	Grasslands Soil	VLRFRRPPRSFVVFLLAVIGIGAAFGHVVNAAGLAAFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD*
Ga0066709_1025033221	3300009137	Grasslands Soil	MLRFRRPPRSFVVFLLVLVAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSWQRVGATSPEELRRLPNIRD
Ga0066709_1027525871	3300009137	Grasslands Soil	VIVLRFRRPPRSFVVFLLAVVGIGAAFGHAVNAAGLAMFFFFIAAIDPKPAWKYQFGKPGTHDDGRAYGRFNSWQRVSATSPDEIRRLPNVRD*
Ga0114129_102042352	3300009147	Populus Rhizosphere	MLRFRKPPPSFVCFLLVVVGIGAAIGHTVNALGLAAFFFFVASIEPKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELPKLHK*
Ga0075423_117278202	3300009162	Populus Rhizosphere	AAHTQHMLIFRKPPLSFVVFLLAMIGIGAAVGHLVNAAGIAAFCFFVASIDPKPAWNFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRKLPDLKN*
Ga0126310_102760142	3300010044	Serpentine Soil	MLRFRRPPRSLIFFLVAVVGIGAAVGHVVNALGFAAFFFFVAGIDPKPAWKFWYGKPGNQYDGRGWQFNSWQRVGATSPKEIRDLPKLRN*
Ga0126310_103933502	3300010044	Serpentine Soil	MFRLRKPPLSLVCFLLFVVAVGAAVGHVVNAAGLAAFFFFVASIDPKPAWKFWYGKQGTMYDGRGWRFNSWQRVDVTSPKDLRKLPDLRN*
Ga0126311_108217691	3300010045	Serpentine Soil	GGGRFSVGIGAAVGHVVNALGFAAFFFFVAGIDPKPAWKFWYGKPGNQYDGRGWQFNSWQRVGATSPKEIRDLPKLRN*
Ga0134067_103300932	3300010321	Grasslands Soil	LAGAQPILRSCCGFRRPPRSFVVFLLAVIGIGAALGHVVNAAGLATFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD*
Ga0134066_100723752	3300010364	Grasslands Soil	MLRFRKPPLSLVCFLVAVVAIGAAFGHLVNALGFAAFFFFVAGIDPKPAWKFWFGKPGDQYKGGGWAFSSHQRVGATSPKEIRDLPDLKH*
Ga0134126_126180802	3300010396	Terrestrial Soil	VVGVGAAFGHTINALGLAAFFFFVASIEAKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELPKLHK*
Ga0126383_100218046	3300010398	Tropical Forest Soil	MLRFRKPPVSFVLFLVVVIAVGAAVDHVMNALGLAVFCFFIASIDPKPAWKFWYGKPGSQYDGKGWAFNSYQRVGATSPKEIRELPKLHK*
Ga0137364_104109201	3300012198	Vadose Zone Soil	MLRFRRPPRSFVVFLLLVIAIGAAVGQAVNAAGLAAFFFFIASIEGKPAWKFWFGKPGSQYDGRGWAFNSHQRVGATSPKEIRDLPKLHH*
Ga0137382_100901032	3300012200	Vadose Zone Soil	VLRFRRPPRSFVVFLLLVIAIGAAVGQAVNAAGLAAFFFFIASIEGKPAWKFWFGKPGSQYDGRGWAFNSHQRVGATSPKEIRDLPKLHH*
Ga0137374_100043766	3300012204	Vadose Zone Soil	MLRLRKPPRSFVVFLLVVVAVGAAVGHAVNAAGFAAFFFFIASIEPKPAWKFWYGKQGSQYDGRGWRFNSWQRVDVTSPKDLRKLPDLRN*
Ga0137374_102140013	3300012204	Vadose Zone Soil	MLRFRRPPRSFVVFLLLIVAIGAAVGHAVNAAGLAVFFFFIASIEPKPAWKFWYGKPGSQYDGRGWRFNSWQRVDVTSPKELRRLPNLRD*
Ga0137374_108287142	3300012204	Vadose Zone Soil	VLRFRRPPPSFVVFLLLVVGIGAAVGHAVNAAGLAAFFFFVASIEAKPSWSFWFGKPGNQYSGRGWAFNSHQRVGATSP
Ga0137380_100246095	3300012206	Vadose Zone Soil	MFRRPPRSFVVFLLAVVGIGAAFGHVVNAAGIAAFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD*
Ga0137379_107210622	3300012209	Vadose Zone Soil	FLLVLLAIGAAVGHTVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRAYGRFNSWQRVGATSPKELRRLPKIRD*
Ga0137379_109362062	3300012209	Vadose Zone Soil	MLRFRRPPRSFVVFLLAVVGIGAAFGHVVNAAGIAAFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD*
Ga0150985_1122503873	3300012212	Avena Fatua Rhizosphere	RKPPVSLLCFLLAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRLSSSQRVGITSPKEMRQAPDIKNL*
Ga0137387_105140112	3300012349	Vadose Zone Soil	VLRFRRPPRSFVVFLLAVVGIGAAFGHVVNAAGIAAFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD*
Ga0137371_100983143	3300012356	Vadose Zone Soil	VLRFRRPPRSFVVFLLLVIAIGAAVGQTVNAAGLAAFFFFIASIEGKPAWKFWFGKPGSQYDGRGWAFNSHQRVGATSPNEIRDLPKLHP*
Ga0137368_102129812	3300012358	Vadose Zone Soil	VLRFRRPPPSFVVFLLLVVGIGAAVGHAVNAAGLAAFFFFVASIEAKPSWSFWFGKPGNQYSGRGWAFNSHQRVGATSPKEIRDLPKLR*
Ga0137375_105687972	3300012360	Vadose Zone Soil	MLRLRKPPLSLVCFLAAVIGIGAGFGHLVNALGLAAFFFFVAAIDAKPSWKFWFGKPGTQYDGRGWQFNSWQRVGATSPKDIRRLPSLKG*
Ga0150984_1207669011	3300012469	Avena Fatua Rhizosphere	KPPVSLLCFLLAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRLSSSQRVGITSPKEMRQAPDIKNL*
Ga0164300_102771881	3300012951	Soil	MLRFRKPPRSLLVFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQSPNIRD*
Ga0164300_110895102	3300012951	Soil	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGIAAFCFFVAAIDPKPAWKFWYGKPGNQYNGKGWAFNSWQRVGATSPKESRELPKLHK*
Ga0164298_102351551	3300012955	Soil	MLRFRKPPRSLLLFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPSWKFWFGKPGNQYDGKGWRFNSWQRV
Ga0164299_100730082	3300012958	Soil	MLRFRKPPRSLLLFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQSPNIRD*
Ga0164301_101873142	3300012960	Soil	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGIAAFCFFVAAIDPKPAWKFWYGKPGNQYNGKGWAFNSWQRVGATSPKEIRELPKLHK*
Ga0134087_101786862	3300012977	Grasslands Soil	FLLAVIGIGAAFGHVVNAAGLAAFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD*
Ga0164309_112111522	3300012984	Soil	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGIAAFCFFVAAIDPKPAWKFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRRLPDIKN*
Ga0164307_103990192	3300012987	Soil	MLRFRKPPRSLLLFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRFNSWQRVGMTTPKEMRQSPNIRD*
Ga0164305_100678622	3300012989	Soil	FLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWFGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQSPNIRD*
Ga0157372_117390482	3300013307	Corn Rhizosphere	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGVAFFCFFIASIDPKPAWKFWYGKPGNQYDGKGWRFNSGQRVGMTSPKEMREAPDLKN*
Ga0182008_108416862	3300014497	Rhizosphere	MLRLRKPPLSFVIFLAAIVAIGAGIGHVVNALGLAAFCFFVASIEAKPAWKFWYGKPGNQYNGRGWAFNSYQRVGATSPKEIRELPKLLK*
Ga0132256_1032754962	3300015372	Arabidopsis Rhizosphere	MLRFRKPPRSLLVFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPSWKFWFGKPGNQYDGKGWRFNSWQRVGMTS
Ga0132257_1000066619	3300015373	Arabidopsis Rhizosphere	MLRFRKPPLSLILFLLAVIGIGAAVGHVVNAAGLALFFFFVASIDPKPAWKFWYGEPGNQYNGKGWAFNSYQRVGATSPKEIRELPKLLK*
Ga0184620_101384952	3300018051	Groundwater Sediment	MLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGLDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPN
Ga0184621_100041312	3300018054	Groundwater Sediment	MLRFRKPPLSLVCFLATVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Ga0184617_10194601	3300018066	Groundwater Sediment	MLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Ga0066662_105533862	3300018468	Grasslands Soil	MLRFRRPPRSFVVFLLVLLAIGGAVGHIVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRVYGRFNSHQRVSATSPKEIRGLPKIRD
Ga0193701_10195302	3300019875	Soil	MLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0247677_10233231	3300024245	Soil	MLRFRKPPRSFVAFLLGIVGIGVFTRHEVDATGVAFFCFFIASIDPKPAWKFWYGKPGTHDDGRAYGRFNSWQRVGATSPKEIRKLPDIRN
Ga0207684_104335771	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLRFRKPPLSFVCFLLAVVGVGAAFGHTINALGLAAFFFFVASIEAKPAWKFWYGKPGNQYNGRGWAFNSWQRVGATSPKEIRELPKLHK
Ga0207700_105540771	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LNLGATHARVASAHTRSMLRFRKPPRSLILFLVAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWYDKPGNQYDGKGWRFNSWQRVGMTSPKEMREAPDIRN
Ga0207664_104393882	3300025929	Agricultural Soil	MLRFRKPPRSLIVFLVAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPAWKFWYDKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDLRN
Ga0207665_102567892	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLRFRKPPRSLICFLVAVIAIGAAFGHLVNAAGFAAFFFYVAAIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMREAPDLKN
Ga0209027_10562922	3300026300	Grasslands Soil	MLRFRRPPRSFVIFLLAVVGVGAAFGHVVNAAGIAVFFFFIAGIDPKPAWKFQFGKPGTHDDGRIYGRFNSWQRVGATSPKEIRRFPNIRD
Ga0209468_10488053	3300026306	Soil	LSLVCFLVAVVAIGTAFGHLVNALGFAAFFFFVAGIDPKPAWKFWFGKPGDQYKGGGWAFSSHQRVGATSPKEIRDLPDLKH
Ga0209155_10944482	3300026316	Soil	MLRFRRPPRSFVIFLLAVVGVGAALGHVVNAAGIAVFFFFIAGIDPKPAWKFQFGKPGTHDDGRIYGRFNSWQRVGATSPKEIRRFPNIRD
Ga0209154_11226442	3300026317	Soil	MLRFRRPPRSFVVFLLVLLAIGGAVGHIVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRVYGRFNSHQRVSATSPKEIRRLPNIRD
Ga0209152_104663262	3300026325	Soil	FRKPPVSLLCFLLAVIAIGAAFGHLVNAAGFAAFFFFVAGIDPKPSWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRDAPDLRN
Ga0209161_104254551	3300026548	Soil	LLAVIGIGAALGHVVNAAGLATFFFFIAAIDPKPAWNYQFGKPGTHDDGRAYGRFNSWQRVSATSPEELRRLPNIRD
Ga0209474_103023091	3300026550	Soil	MLRFRRPPRSFVIFLLAVVGVGAAFGHVVNAAGIAVFFFFIAGIDPKPAWKFQFGKPGTHDDGRIYGRFNSWQRVGA
Ga0209577_104284372	3300026552	Soil	VMLRFRRPPRSFVVFLLVLLAIGGAVGHIVNAAGLAVFFFFIAAIDPKPSWTYQFGKPGTHDDGRVYGRFNSHQRVSATSPKEIRRLPNIRD
Ga0209073_104698831	3300027765	Agricultural Soil	MLRFRKPPRSLLLFLFAVVAIGAAFGHLVNAAGFAAFFFFVAGIDPKPSWKFWFGKPGNQYDGKGWRFNSWQRVGMTSPKE
Ga0209177_103752312	3300027775	Agricultural Soil	MLRFRKPPLSLVLFLLAVIGTGAAVGHVVNAAGLALFFFFVASIDPKPAWKFWYGKPGNQYNGKGWAFNSYQRVGATSPKEIRELPKLLK
Ga0307293_101145781	3300028711	Soil	MLRFRKPPVSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPSWKFWFGKPGTQYDGRGWQFNSWQRV
Ga0307303_101349772	3300028713	Soil	VLRFRKPPRSFVIFLLVIVGIGVAFGHPVNATGIAIFLFFVNSIEAKPAWNFWWGKPGNQYNGRGWAFNSHQRVGATSPKEIRDLPKLYK
Ga0307311_101867622	3300028716	Soil	MLRFRKPPLSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0307317_100319853	3300028720	Soil	MLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRNLPNIKD
Ga0307316_101885062	3300028755	Soil	KPPLSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0307316_102477081	3300028755	Soil	NTPPPPSAHTSSMLILRRPPRSLVVFLLVVVGIGAAIGHVVNAAGLAVFFFFIASIEPKPAWKFWFGKPGNQYDGRGWRFNSWQRVGATSPKEIRQLPDLRN
Ga0307280_102820682	3300028768	Soil	KPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Ga0307323_101223802	3300028787	Soil	VVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0307287_102844121	3300028796	Soil	SAHTQTMLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0307305_100027387	3300028807	Soil	SSVVNPNATQAFRPSAHTQTMLRFRKPPLSLVCFLVAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Ga0307294_102512892	3300028810	Soil	FRKPPLSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGSQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0307292_102187842	3300028811	Soil	VLRFRNPPRSFVIFLLVIVGIGVAFGHPVNATGIAIFLFFVNSIEAKPAWNFWWGKPGNQYNGRGWAFNSHQRVGATSPKEIRDLPKLYK
Ga0307302_100711212	3300028814	Soil	MLRFRKPPLSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Ga0307310_100051353	3300028824	Soil	VIFLLVIVGIGVAFGHPVNATGIAIFLFFVNSIEAKPAWNFWWGKPGNQYNGRGWAFNSHQRVGATSPKEIRDLPKLYK
Ga0307310_100475702	3300028824	Soil	MLILRRPPRSLVVFLLVVVGIGAAVGHVVNAAGLAVFFFFIASIEPKPAWKFWFGKPGNQYDGRGWRFNSWQRVGATSPKEIRELPNLRD
Ga0307310_104436272	3300028824	Soil	MLRFRKPPVSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPSWKFWFGKPGTQYDGRGWQFNSWQRVGATSPK
Ga0307312_103742451	3300028828	Soil	MLRFRKPPVSLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPSWKFWFGKPGTQYDGRGWQFNSWQRVGATS
Ga0307312_106470911	3300028828	Soil	MLILRRPPRSLVVFLLVVVGIGAAIGHVVNAAGLAVFFFFIASIEPKPAWKFWFGKPGNQYDGRGWRFNSWQRVGATSPKEIRQ
Ga0307312_111338172	3300028828	Soil	VGATHSFRRPAHTRRVLRFRNPPRSFVIFLLVIVGIGVAFGHPVNATGIAIFLFFVNSIEAKPAWNFWWGKPGNQYNGRGWAFNSHQRVGATSPKEIRDLPKLYK
Ga0307278_100027753	3300028878	Soil	MLRFRKPPLSLVCFLAAVVGIGGAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWKFNSWQRVGATSPKEIRSLPNIKD
Ga0307277_101421222	3300028881	Soil	SLVCFLAAVVGIGAAFGHLVNALGFAAFFFFVAGIDPKPAWSFWFGKPGTQYDGRGWQFNSWQRVGATSPKEIRSLPNIKD
Ga0307277_101439052	3300028881	Soil	MFILRKPPRSLVIFLLVVVGIGAAVGHVVNAAGLAFFFFFIAAIEPKPAWKFWFGKPGNQYDGRGWQLNSWQRVGATSPKEIRRLPNIRD
Ga0307304_105835222	3300028885	Soil	MLILRRPPRSLVVFLLVVVGIGAAIGHVVNAAGLAVFFFFIASIEPKPAWKFWFGKPGNQYDGRGWRFNSWQRVGATSPKEIRQLPDLRN
Ga0308175_1013490702	3300031938	Soil	MLRLRKPPPSLVVFLLAVLGVGAAVGHLVNATGLAAFFFFVAAIDPKPAWKFWYGKPGNQYDGKGWRFNSWQRVGMTSPKEMRQSPDIRN
Ga0307472_1013840372	3300032205	Hardwood Forest Soil	MLIFRKPPLSFVLFLLLMIGIGAAVGHLVNAAGLAAFCFFVASIDPKPAWNFWYGKQGNQYDGKGWRFNSWQRVDVTSPKELRKLPDLRN
Ga0307472_1026423142	3300032205	Hardwood Forest Soil	HMLRFRKPPRSFVLFLLIVVGIGVFTRHEVDAAGVAAFCFFVAAIDPKPAWSFWYGKPGNQYNGRGWAFNSYQRVGATSPKEIRELPKLLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062668

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences