Metagenome Family F062659

Basic Information
Family ID	F062659
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	43 residues
Representative Sequence	VILGIVVLIYKFAPPLRMRYELVLSAALVALGVAYVMMA
Number of Associated Samples	110
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.92 %
% of genes near scaffold ends (potentially truncated)	90.77 %
% of genes from short scaffolds (< 2000 bps)	90.77 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (90.769 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.923 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.385 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.76% β-sheet: 0.00% Coil/Unstructured: 52.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF04909	Amidohydro_2	8.46
PF00296	Bac_luciferase	6.15
PF08334	T2SSG	5.38
PF00128	Alpha-amylase	4.62
PF01914	MarC	4.62
PF12697	Abhydrolase_6	2.31
PF12681	Glyoxalase_2	1.54
PF13649	Methyltransf_25	1.54
PF08352	oligo_HPY	1.54
PF00144	Beta-lactamase	1.54
PF01546	Peptidase_M20	1.54
PF00578	AhpC-TSA	1.54
PF00583	Acetyltransf_1	1.54
PF13432	TPR_16	1.54
PF00150	Cellulase	0.77
PF06348	DUF1059	0.77
PF13414	TPR_11	0.77
PF01591	6PF2K	0.77
PF04961	FTCD_C	0.77
PF01638	HxlR	0.77
PF13673	Acetyltransf_10	0.77
PF09365	DUF2461	0.77
PF03706	LPG_synthase_TM	0.77
PF02518	HATPase_c	0.77
PF12840	HTH_20	0.77
PF01266	DAO	0.77
PF13538	UvrD_C_2	0.77
PF01370	Epimerase	0.77
PF01425	Amidase	0.77
PF13517	FG-GAP_3	0.77
PF01740	STAS	0.77
PF05163	DinB	0.77
PF07978	NIPSNAP	0.77
PF08818	DUF1801	0.77
PF00011	HSP20	0.77
PF00596	Aldolase_II	0.77
PF00892	EamA	0.77
PF01243	Putative_PNPOx	0.77
PF04542	Sigma70_r2	0.77
PF01220	DHquinase_II	0.77
PF02922	CBM_48	0.77
PF04055	Radical_SAM	0.77
PF05378	Hydant_A_N	0.77
PF14226	DIOX_N	0.77
PF01541	GIY-YIG	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	6.15
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	4.62
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	4.62
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	4.62
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	4.62
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	4.62
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.54
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.54
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.54
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.54
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.77
COG3404	Formiminotetrahydrofolate cyclodeaminase	Amino acid transport and metabolism [E]	0.77
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.77
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.77
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.77
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.77
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.77
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.77
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.77
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.77
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.77
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.77
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.77 %
Unclassified	root	N/A	9.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.77 %
Unclassified	root	N/A	9.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.77 %
Unclassified	root	N/A	9.23 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.54 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	21.54 %
Unclassified	root	N/A	9.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	21.54 %
Unclassified	root	N/A	9.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	21.54 %
Unclassified	root	N/A	9.23 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.08 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.54 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	20.77 %
Unclassified	root	N/A	9.23 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.77 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.77 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.77 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.77 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.77 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	17.69 %
Unclassified	root	N/A	9.23 %
Candidatus Rokubacteria bacterium 13_1_40CM_69_27	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	3.08 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.77 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.77 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	17.69 %
Unclassified	root	N/A	9.23 %
Candidatus Rokubacteria bacterium 13_1_40CM_69_27	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	3.08 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.54 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.77 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.77 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	0.77 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	17.69 %
Unclassified	root	N/A	9.23 %
Candidatus Rokubacteria bacterium 13_1_40CM_69_27	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	3.08 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.54 %
Variovorax sp. CF079	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079	0.77 %
Actinomadura decatromicini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura decatromicini	0.77 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.77 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0994832	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100342457	Not Available	514	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105550928	Not Available	1181	Open in IMG/M
3300000443\|F12B_10886535	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300000550\|F24TB_11251318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300000559\|F14TC_100066878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300000559\|F14TC_101983653	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300000890\|JGI11643J12802_11155396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300000956\|JGI10216J12902_113105133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2572	Open in IMG/M
3300002908\|JGI25382J43887_10063638	All Organisms → cellular organisms → Bacteria → Proteobacteria	1997	Open in IMG/M
3300004479\|Ga0062595_101444161	Not Available	630	Open in IMG/M
3300005167\|Ga0066672_10652153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300005177\|Ga0066690_10872792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300005334\|Ga0068869_100817173	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005338\|Ga0068868_101567386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	618	Open in IMG/M
3300005353\|Ga0070669_100775553	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005441\|Ga0070700_101562530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	563	Open in IMG/M
3300005445\|Ga0070708_100032895	All Organisms → cellular organisms → Bacteria	4501	Open in IMG/M
3300005450\|Ga0066682_10489596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300005539\|Ga0068853_102078665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	551	Open in IMG/M
3300005540\|Ga0066697_10156961	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300005557\|Ga0066704_10253636	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300005557\|Ga0066704_10407881	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005558\|Ga0066698_10127108	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300005558\|Ga0066698_10295629	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300005576\|Ga0066708_10321686	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300005586\|Ga0066691_10003775	All Organisms → cellular organisms → Bacteria	6418	Open in IMG/M
3300005713\|Ga0066905_101589512	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005764\|Ga0066903_101316597	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005764\|Ga0066903_102358423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1029	Open in IMG/M
3300006058\|Ga0075432_10151935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	890	Open in IMG/M
3300006755\|Ga0079222_10299328	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300006844\|Ga0075428_100374064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1528	Open in IMG/M
3300006847\|Ga0075431_100705779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	986	Open in IMG/M
3300006852\|Ga0075433_11848728	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006854\|Ga0075425_102177344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	618	Open in IMG/M
3300006871\|Ga0075434_101428779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	701	Open in IMG/M
3300006880\|Ga0075429_100181052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1847	Open in IMG/M
3300006969\|Ga0075419_11359559	Not Available	529	Open in IMG/M
3300007258\|Ga0099793_10690533	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009012\|Ga0066710_100099493	All Organisms → cellular organisms → Bacteria	3883	Open in IMG/M
3300009012\|Ga0066710_100604133	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300009012\|Ga0066710_101785126	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	930	Open in IMG/M
3300009143\|Ga0099792_10894694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	587	Open in IMG/M
3300009147\|Ga0114129_10427670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1740	Open in IMG/M
3300009148\|Ga0105243_11342407	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300009156\|Ga0111538_10152380	All Organisms → cellular organisms → Bacteria	2937	Open in IMG/M
3300009162\|Ga0075423_10615641	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300009168\|Ga0105104_10802046	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009553\|Ga0105249_10449902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1326	Open in IMG/M
3300009553\|Ga0105249_11696971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300009792\|Ga0126374_10592635	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300009792\|Ga0126374_11859409	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300009813\|Ga0105057_1079271	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010043\|Ga0126380_10406101	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300010046\|Ga0126384_10184434	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300010046\|Ga0126384_10798185	Not Available	845	Open in IMG/M
3300010358\|Ga0126370_10735371	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300010359\|Ga0126376_11499141	Not Available	703	Open in IMG/M
3300010360\|Ga0126372_11376194	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300010362\|Ga0126377_13092839	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010362\|Ga0126377_13186153	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300010376\|Ga0126381_102008502	Not Available	833	Open in IMG/M
3300010863\|Ga0124850_1003711	All Organisms → cellular organisms → Bacteria → Proteobacteria	4654	Open in IMG/M
3300012096\|Ga0137389_10178112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1759	Open in IMG/M
3300012199\|Ga0137383_11063403	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300012200\|Ga0137382_10365684	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012203\|Ga0137399_10558380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	962	Open in IMG/M
3300012203\|Ga0137399_11777396	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012685\|Ga0137397_10257703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1300	Open in IMG/M
3300012685\|Ga0137397_10435809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura decatromicini	976	Open in IMG/M
3300012923\|Ga0137359_10692478	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300012923\|Ga0137359_11305867	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300012930\|Ga0137407_10719569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	940	Open in IMG/M
3300012931\|Ga0153915_10415793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1524	Open in IMG/M
3300012948\|Ga0126375_10378406	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012948\|Ga0126375_10556408	Not Available	867	Open in IMG/M
3300012971\|Ga0126369_13303556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300012975\|Ga0134110_10111726	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300014154\|Ga0134075_10120887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300014326\|Ga0157380_11539093	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300014861\|Ga0180061_1038341	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300015053\|Ga0137405_1289135	All Organisms → cellular organisms → Bacteria	3290	Open in IMG/M
3300015264\|Ga0137403_10002604	All Organisms → cellular organisms → Bacteria	22027	Open in IMG/M
3300015264\|Ga0137403_10058824	All Organisms → cellular organisms → Bacteria → Proteobacteria	3933	Open in IMG/M
3300018052\|Ga0184638_1133980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300018076\|Ga0184609_10493467	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300018422\|Ga0190265_12049489	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300018482\|Ga0066669_11502391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	612	Open in IMG/M
3300019377\|Ga0190264_10498987	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	831	Open in IMG/M
3300019789\|Ga0137408_1444762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4619	Open in IMG/M
3300020004\|Ga0193755_1169781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300022534\|Ga0224452_1071767	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300024283\|Ga0247670_1090319	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026295\|Ga0209234_1160137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300026335\|Ga0209804_1117613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1208	Open in IMG/M
3300026342\|Ga0209057_1089083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1281	Open in IMG/M
3300026342\|Ga0209057_1199449	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300026538\|Ga0209056_10550521	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300026547\|Ga0209156_10056601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2059	Open in IMG/M
3300026550\|Ga0209474_10234825	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300026552\|Ga0209577_10797551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300027717\|Ga0209998_10140351	Not Available	617	Open in IMG/M
3300027821\|Ga0209811_10240936	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300027874\|Ga0209465_10596529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300027875\|Ga0209283_10192260	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300027880\|Ga0209481_10067032	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300027909\|Ga0209382_10381000	Not Available	1574	Open in IMG/M
3300030006\|Ga0299907_11087846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300031198\|Ga0307500_10071051	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300031229\|Ga0299913_10759407	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300031544\|Ga0318534_10046150	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300031668\|Ga0318542_10202898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1000	Open in IMG/M
3300031682\|Ga0318560_10736763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	532	Open in IMG/M
3300031720\|Ga0307469_11595999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300031720\|Ga0307469_12180807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	539	Open in IMG/M
3300031793\|Ga0318548_10266097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	843	Open in IMG/M
3300031824\|Ga0307413_10598500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300031943\|Ga0310885_10656322	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	586	Open in IMG/M
3300031995\|Ga0307409_102307390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300032005\|Ga0307411_11928131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300032012\|Ga0310902_10258771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1052	Open in IMG/M
3300032043\|Ga0318556_10165027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1146	Open in IMG/M
3300032052\|Ga0318506_10469684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	558	Open in IMG/M
3300032066\|Ga0318514_10255149	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300032174\|Ga0307470_10220194	Not Available	1230	Open in IMG/M
3300032174\|Ga0307470_10245535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079	1179	Open in IMG/M
3300032180\|Ga0307471_100836133	Not Available	1088	Open in IMG/M
3300032180\|Ga0307471_103765895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_69_27	536	Open in IMG/M
3300034176\|Ga0364931_0019863	All Organisms → cellular organisms → Bacteria → Proteobacteria	1886	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.77%
Host-Associated	Host-Associated	19.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.15%
Plants	Host-Associated → Plants	19.23%
Aquatic	Environmental → Aquatic	4.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.15%
Sediment	Environmental → Aquatic → Sediment	3.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.08%
Freshwater	Environmental → Aquatic → Freshwater	1.54%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	8.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.77%
Sand	Environmental → Terrestrial → Soil → Sand	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.77%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09948321	2228664022	Soil	SLWWAVILGIVVLVYKLAPPLRMRYELVLSAALVAFGVAYVMMA
INPhiseqgaiiFebDRAFT_1003424571	3300000364	Soil	MSSLWWAVILGFVALIYKWAPPLRLRYELALSAALVALGVAYVMTA*
INPhiseqgaiiFebDRAFT_1055509281	3300000364	Soil	SLWWAVILGVVVLIYKLAPPLRIRDELVLSLALAALGVAYVRMA*
F12B_108865352	3300000443	Soil	GIVVLIYKLAPPLRMRYELVLSAALLALGVAYVMMKA*
F24TB_112513181	3300000550	Soil	GMSSLWWAVLLGTVVLIYKLAPPLRMRYELVLSAALVALGVAYLMMA*
F14TC_1000668781	3300000559	Soil	GLVVLVYKLAPPLRMREELVLSTALAALGVAYVVMR*
F14TC_1019836532	3300000559	Soil	GIVVLIYKFAPPLRMRYELVLSAALVAFGVAYVMMA*
JGI11643J12802_111553961	3300000890	Soil	GIVVLVYKLAPPLRLRYELVLSATLVALGLAYFMMA*
JGI10216J12902_1131051332	3300000956	Soil	VILGIVVLIYKFAPPLQMRYELVLSVALVALGVAYLMMA*
JGI25382J43887_100636383	3300002908	Grasslands Soil	WWAVILGIVVLIYKFAPPLRMRYELVLSAALVAFGVAYVMMA*
Ga0062595_1014441611	3300004479	Soil	VILGVVVLVYKLARPLRWRYDLALSAAMVALGVAYVLMA*
Ga0066672_106521532	3300005167	Soil	VILGIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA*
Ga0066690_108727922	3300005177	Soil	WWVVILSIVVLVYKFAPPLRMRYELVLSAAMVALGVAYLMMA*
Ga0068869_1008171732	3300005334	Miscanthus Rhizosphere	LGMSSLWWAVLLGIVVLVYKLVPPLRMRYELVLSAALVALGAAYLMMA*
Ga0068868_1015673861	3300005338	Miscanthus Rhizosphere	SSLWWAVVLSIVILIYKLAPPLRLRYELVLSAALVALGVAYVM*
Ga0070669_1007755531	3300005353	Switchgrass Rhizosphere	LLGMTSLWWAVILSIVIHIYKLAPPLRMHYELVLSAALVALGVAYVLTT*
Ga0070700_1015625301	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GMSSLWWAVILGIVVLTYKLAPPLRLGYELALSLALVALGVAYFRVA*
Ga0070708_1000328952	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VILGIVVLTYKLAPPLRWRYELALSLALVALGVAYFRVA*
Ga0066682_104895961	3300005450	Soil	GVILGIVVLIYKLAPPLRLRHELVLSLALVALGVAYIKLA*
Ga0068853_1020786651	3300005539	Corn Rhizosphere	VLIGMSSLWWAVILGIVVLTYKLAPPLRLGYELALSLALVALGVAYFRVA*
Ga0066697_101569611	3300005540	Soil	LGMSSLWWAVILGIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA*
Ga0066704_102536361	3300005557	Soil	VVLIYKFAPPLRMRYELVLSAALVALGVAYVMMA*
Ga0066704_104078812	3300005557	Soil	GIVVLIYKFAPPLRMRYELVLSAALVALGVAYVMMA*
Ga0066698_101271081	3300005558	Soil	VVLIYKFAPPLRMRYELVLSAAFVALGVAYVMMA*
Ga0066698_102956292	3300005558	Soil	LLGMSSLWWAVILGIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA*
Ga0066708_103216862	3300005576	Soil	LGMSSLWWAVILGIVVLIYKLAPPLRLRYELVLSLALVALAVAYIKMA*
Ga0066691_100037751	3300005586	Soil	LWWAVILGIVVLIYKFAPPLPMRYELLLSAALVALGVAYLMMA*
Ga0066905_1015895122	3300005713	Tropical Forest Soil	MSSLWWAVILGLVVLVYKLAPSFDTRYELVLSAALVALGVAYAMTA*
Ga0066903_1013165973	3300005764	Tropical Forest Soil	LLGMSSLWWAVVLGFVVLVYKWAPPLRMRYELALSAVLVTLGVLYVTMA*
Ga0066903_1023584234	3300005764	Tropical Forest Soil	VVLVYKWAPPLRMRYELVLSAVLMAVGVAYVMTA*
Ga0075432_101519352	3300006058	Populus Rhizosphere	VVIVYKLAPPLRIREELVLSAALVALGVTYLVMR*
Ga0079222_102993282	3300006755	Agricultural Soil	VILVYKLTPPLRIRYELALSAALVALGVAYVMMA*
Ga0075428_1003740641	3300006844	Populus Rhizosphere	MASLWWAVLLGIVVLIYKLAPPLRMRYELILSAALVALGVAYILTA*
Ga0075431_1007057793	3300006847	Populus Rhizosphere	SLWWTVILAIVVLLYKLAPPLRMPYELLLSATLVALGVAYVMTA*
Ga0075433_118487282	3300006852	Populus Rhizosphere	VAMVLLGMASLWWAVLLGIVVLIYKLAPPLRMRYELILSAALMALGVAYILTA*
Ga0075425_1021773441	3300006854	Populus Rhizosphere	IVVLIYKLAPPLRLRYELFLSLALVALAVAYLKMA*
Ga0075434_1014287792	3300006871	Populus Rhizosphere	GMSSLWWAVILGIVVVIYKLAPPLPMRYELLLSAALVALGVAHVMMAGSTT*
Ga0075429_1001810521	3300006880	Populus Rhizosphere	IGMSSLWWAVILGIVVLVYKLAPPLQLRYEVALSLGLVALGVAYLRMA*
Ga0075419_113595592	3300006969	Populus Rhizosphere	GIVVLVYKLAPPLQLRYEVALSLGLVALGVAYLRMA*
Ga0099793_106905331	3300007258	Vadose Zone Soil	AVILGIVVLIYKFAPPLPMRYELLLSAALVALGVAYLMMA*
Ga0066710_1000994933	3300009012	Grasslands Soil	MVLIGMSTLWWAVILGIVVLIYKLAPPLRMRYELVFSLALAALGVAYLMAGQ
Ga0066710_1006041332	3300009012	Grasslands Soil	WVVILGIVVLIYKLAPPLRMRDELVLSLALVALGAAYLKMAI
Ga0066710_1017851262	3300009012	Grasslands Soil	LGMSSLWWAVILGIVVLIYKLAPPLRMRYELVLSAALVALGVAYLMMA
Ga0099792_108946941	3300009143	Vadose Zone Soil	LGIVILIYKLAPPLRMRYELVLSAALVALGVAYVIW*
Ga0114129_104276701	3300009147	Populus Rhizosphere	SLWWAVILGVVVLIYKFAPPLRLRDELVLSAALVALGVAYVMMA*
Ga0105243_113424071	3300009148	Miscanthus Rhizosphere	VLLGVVVLVYKLVPPLRMRYELVLSAALVALGAAYLMMA*
Ga0111538_101523805	3300009156	Populus Rhizosphere	LGTVVLIYKFAPPLRMRSELVLSAALVALGVAYVMVA*
Ga0075423_106156413	3300009162	Populus Rhizosphere	TLSIVVLVYKFAPPLRMRYELLLSAALVALGVAYLMTA*
Ga0105104_108020462	3300009168	Freshwater Sediment	LGMSSLWWAVILGIVVLIYKLAPPLRMRYELVLSAALVALGVAYVIVA*
Ga0105249_104499021	3300009553	Switchgrass Rhizosphere	VILGTVVLIYKFAPPLRMRYELVLSAALVALGVAYVMMA*
Ga0105249_116969712	3300009553	Switchgrass Rhizosphere	WWAVILGIVVLVYKLAPPLRLRYELVLSLALVVLGVAYVVMA*
Ga0126374_105926351	3300009792	Tropical Forest Soil	WAVILGIVTLIYKLAPPLRTRYELVLVAFLVALGVAYLAMA*
Ga0126374_118594091	3300009792	Tropical Forest Soil	SLWWAVILGLVVLIYKLAPPLRMRDELVLAIALVALGVAYVKMA*
Ga0105057_10792712	3300009813	Groundwater Sand	VILGIVVLIYKLAPPLRMRHELVLSLALAALGVVFATTAIP*
Ga0126380_104061012	3300010043	Tropical Forest Soil	VLVYKFAPPLPMRYELALSAALVALGVAYIIGTR*
Ga0126384_101844343	3300010046	Tropical Forest Soil	LGMSSLWWAVILGLVVLFYKWASPLLMRSGLALSASLVALGVVYAMMA*
Ga0126384_107981853	3300010046	Tropical Forest Soil	IVLFYKWAPPLRMRYELALSAALVALGVVYAMTA*
Ga0126370_107353713	3300010358	Tropical Forest Soil	IYKFVPPLPIRYELGLSAALVGLGVAYAMMARGGP*
Ga0126376_114991412	3300010359	Tropical Forest Soil	WWAAILSIVVLVYKFAPPLRLGYELILSLALAALGVAYVMTA*
Ga0126372_113761942	3300010360	Tropical Forest Soil	GWTVILGLVVVIYKLAPPLPTRYELALSAVLVALGVLHVMMA*
Ga0126377_130928391	3300010362	Tropical Forest Soil	ILGLVVVIYKLAPPLPTRYELALSGALVALGVAYVMMA*
Ga0126377_131861532	3300010362	Tropical Forest Soil	LWWAVILGLVVLVYKLAPPLRMREELILSAALVALGMAYFVCSS*
Ga0126381_1020085021	3300010376	Tropical Forest Soil	MSSLWWGVILSLVVLIYKFVPPLPIRYELALSAALVALGVAYVMMARGGP*
Ga0124850_10037112	3300010863	Tropical Forest Soil	VVILSLVVLVYKFAPPLPMRYELALSAALVALGVAYVIGTR*
Ga0137389_101781125	3300012096	Vadose Zone Soil	LWWAVILSIVVLVYKFAPPLRMRYELVLSTAMVALGVAYLMMA*
Ga0137383_110634032	3300012199	Vadose Zone Soil	GMSSLWWGVILGIVVLIYKLAPPLRMRDELVLALALVALGVAYIRMA*
Ga0137382_103656842	3300012200	Vadose Zone Soil	SSLSWAVILGIVILIYKLAPPLRMRYELVLSAALVALGVAYVIW*
Ga0137399_105583802	3300012203	Vadose Zone Soil	VILGIVVLIYKLAPPLRMRYELVLSLALVALGVAYLIVA*
Ga0137399_117773961	3300012203	Vadose Zone Soil	AVILGLVVLVYKLAPPLRMRYELALSAALVALGLAYVIGTR*
Ga0137397_102577032	3300012685	Vadose Zone Soil	MQCGAHGAMVLIGMVSLWWTVILGIVVVIYKLAPPLRMRHELVLSLAVAALGVACMTMA*
Ga0137397_104358093	3300012685	Vadose Zone Soil	GIVALVYKFAPPLRMRYELVLSAALVALGVAYVMMA*
Ga0137359_106924783	3300012923	Vadose Zone Soil	LWWGVILGIVVLIYKLAPPLRMRDELVLSLALVALGVAYIRMA*
Ga0137359_113058672	3300012923	Vadose Zone Soil	LWWGVILGIVVLIYKLAPPLRMRYELVLSAALVALGVTHLMMA*
Ga0137407_107195693	3300012930	Vadose Zone Soil	WGVILGVVVFIYKLAPPLRMRDELFLSLALVALGVTYIRMA*
Ga0153915_104157932	3300012931	Freshwater Wetlands	GMSSLWWGMILGIVVLIYKLAPPLRMRDELVLSLALMALGVAYIRIA*
Ga0126375_103784063	3300012948	Tropical Forest Soil	VVLIYKFVPPLPIRYELALSAALVGLGVAYVMMA*
Ga0126375_105564082	3300012948	Tropical Forest Soil	AMVLIGMSSLWWAVILGIIVLIYKLAPPLRMRDELVLAIALVALGVAYVKVA*
Ga0126369_133035561	3300012971	Tropical Forest Soil	MVLLGMSSLWWGVTLGLVVLIYKFVPPLPIRYELALSAALVALGVAYVMMA*
Ga0134110_101117261	3300012975	Grasslands Soil	LWWAVILGLVVLIYKFAPPLRMRYELALSAALVALGVAYVIGTR*
Ga0134075_101208872	3300014154	Grasslands Soil	LWWAVILGIVVLTYKLAPPLRLRYELVLSLALVALAVAYIKMA*
Ga0157380_115390931	3300014326	Switchgrass Rhizosphere	IVVLTYKLAPPLRLGYELALSLALVALGVAYFRVA*
Ga0180061_10383412	3300014861	Soil	AMVLLGMSSLWWAVILGLVVLIYKLAPPLSMRYELALSAALVALGVAYVMMA*
Ga0137405_12891354	3300015053	Vadose Zone Soil	MMAMVLIGMSSLGWAVILGIVVLIYKLAPPLRMRYELVLSLALVALGVAYLIVA*
Ga0137403_1000260424	3300015264	Vadose Zone Soil	VVLIYKFAPPLRMRYELVLSAALVAFGVAYVMMA*
Ga0137403_100588244	3300015264	Vadose Zone Soil	VVLIYKFAPPLRMRYELVLSAALVALGAAYVMMA*
Ga0184638_11339801	3300018052	Groundwater Sediment	LGIVVLVYKLAPPLRMRNELVLSLALAALGVVYVTTA
Ga0184609_104934672	3300018076	Groundwater Sediment	GMSSLWWAVILGVVVLLYKLAPALQMRYEVVLSLALVALGVVYATTP
Ga0190265_120494893	3300018422	Soil	VILGIVVLIYKLVPPLRMRDELVLSLALVALGVAYIRMA
Ga0066669_115023912	3300018482	Grasslands Soil	VILGIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA
Ga0190264_104989872	3300019377	Soil	VLGVVVLIYKLAPLLHMRHELVLAAALVALGVAYVVMA
Ga0137408_14447627	3300019789	Vadose Zone Soil	VILGIVVLIYKLAPPLRMRYELGLSAALVALGLAYVMMA
Ga0193755_11697812	3300020004	Soil	LWWAVILSIVILIYKLAPPLRMRYELVLSAALVALGVTYLMMA
Ga0224452_10717671	3300022534	Groundwater Sediment	MSSLWWAVILGIVVLIYKFAPPLRMRYELLLSAAPVALGVAYVMMA
Ga0247670_10903191	3300024283	Soil	LLGMSSFWWAVILGFVVLIYKLAPPLRMRYELALSAALVALGVAYVTMA
Ga0209234_11601371	3300026295	Grasslands Soil	MSSLWWAVIMGIVVLIYKFAPPLRMRYELVLSAALVVLGVAYVMMRETDKA
Ga0209804_11176132	3300026335	Soil	IVVLIYKFAPPLRMRYELVLSAALVALGVAYVMMA
Ga0209057_10890833	3300026342	Soil	VILGIVVLIYKFAPPLRMRYELVLSAALVALGVAYVMMA
Ga0209057_11994492	3300026342	Soil	GMSSLWWVVILGIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA
Ga0209056_105505212	3300026538	Soil	LGIVVLVYKFAPPLRMRYELVLSAALVALGVAYVMMA
Ga0209156_100566013	3300026547	Soil	VVILGIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA
Ga0209474_102348253	3300026550	Soil	GIVVLIYKLAPPLRMRYELVLSAALVAFGVAYVMMA
Ga0209577_107975511	3300026552	Soil	MSSLWWAVIMGIVVLIYKFAPPLRMRYELVLSAALVVLGVAYVMMRETDKAR
Ga0209998_101403512	3300027717	Arabidopsis Thaliana Rhizosphere	AMVLLGMASLGWSVLLGLVVLVYKLAPPLRMREELALAVALVALGVAYVVMA
Ga0209811_102409361	3300027821	Surface Soil	AFIVAIYKLAPPLQTRYELALSLALAALGVVYATTA
Ga0209465_105965291	3300027874	Tropical Forest Soil	WWGVILGLVVLIYKFVPPLPIRYELALSAALVALGVAYVMMA
Ga0209283_101922602	3300027875	Vadose Zone Soil	LGIVVLIYKLAPPLRMRNELVLSLALAALGVVYVTTA
Ga0209481_100670323	3300027880	Populus Rhizosphere	WAVILGLVVLAYKLAPPLQTRYELVLSAALVALGVVYVMVA
Ga0209382_103810001	3300027909	Populus Rhizosphere	IGMSSLWWAVILGIVVLVYKLAPPLQLRYEVALSLGLVALGVAYLRMA
Ga0299907_110878461	3300030006	Soil	LLGMSSLWWAVLLGIVVLVYKLSPPLPLRYELALSAALVALGVAYVMVA
Ga0307500_100710511	3300031198	Soil	GMSSLWWAVILSIVILIYKLAPPLRMRYELVLSAALVALGVAYVIW
Ga0299913_107594071	3300031229	Soil	MSSLWWAVLLGIVVLVYKLSPPLPLRYELALSAALVALGVAYVMGA
Ga0318534_100461504	3300031544	Soil	WGVTLGFVVLIYKFVPPLPIRYELALSAALVGLGVAYVMMA
Ga0318542_102028982	3300031668	Soil	AMSSLWWAVVLGVVVLVYKWAPPLRMRYELVLSAALVALGAAYVMTA
Ga0318560_107367632	3300031682	Soil	WWAVVLGVVVLVYKWAPPLRMRYELVLSAALVALGAAYVMTA
Ga0307469_115959992	3300031720	Hardwood Forest Soil	VLLGMSSLWWAVVLGIVVLIYKLAPPLRMRHELILSAALVALGVVYVAMA
Ga0307469_121808071	3300031720	Hardwood Forest Soil	LGVVVLIYKLAPPLRMRYELVLSAALVAFGVTYILTA
Ga0318548_102660972	3300031793	Soil	SLWWAVVLGVVVLVYKWAPPLRMRYELVLSAALVALGAAYVMTA
Ga0307413_105985002	3300031824	Rhizosphere	AVILAIVILVYKLAPPLRMRHELVLSAPLAAVGVGYLMMA
Ga0310885_106563222	3300031943	Soil	SSLWWAVILSIVILIYKLAPPLRMRYELVLSAALVAFGVAYVI
Ga0307409_1023073901	3300031995	Rhizosphere	AILGIVVLIYKLVPPLRMRYELVLSAALMALGAAYLMMA
Ga0307411_119281312	3300032005	Rhizosphere	AAILGIVVLIYKLVPPLRMRYELVLSAALMALGAAYLMMA
Ga0310902_102587711	3300032012	Soil	VLLGMSSLWWAVILGIVVLVYKLVPPLRMRYELILSATLVALGAAYIMLA
Ga0318556_101650271	3300032043	Soil	MSSLWWAVVLGVVVLVYKWAPPLRMRYELVLSAALVALGAAYVMTA
Ga0318506_104696842	3300032052	Soil	LGVVVLVYKWAPPLRMRYELVLSAALVALGAAYVMTA
Ga0318514_102551493	3300032066	Soil	LWWGVTLGFVVLIYKFVPPLPIRYELALSAALVGLGVAYVMMA
Ga0307470_102201941	3300032174	Hardwood Forest Soil	IGMSSLWWAVILGIVVLIYKVAPPLRFRSELALSLALVALGVAYVRMA
Ga0307470_102455353	3300032174	Hardwood Forest Soil	LGIVVLIYKLAPPLRIRYELVLSAALVALGVAYVIVA
Ga0307471_1008361332	3300032180	Hardwood Forest Soil	LVALIYKWAPPLRLRYELALSAALVALGVAYVMTA
Ga0307471_1037658952	3300032180	Hardwood Forest Soil	VLLGMSSLWWAVILSIVILMYKLAPPLRMRYELVLSAALVAFGAAYVIW
Ga0364931_0019863_3_116	3300034176	Sediment	LGLVVLIYKFAPPLRMRYELALSAALVALGVAYVMMA

Hidden Markov Model


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