Metagenome Family F062648

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062648
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	60 residues
Representative Sequence	TMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Number of Associated Samples	91
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.62 %
% of genes near scaffold ends (potentially truncated)	77.69 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (62.308 % of family members)
Environment Ontology (ENVO)	Unclassified (76.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.78% β-sheet: 0.00% Coil/Unstructured: 51.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00067	p450	12.31
PF00866	Ring_hydroxyl_B	8.46
PF07704	PSK_trans_fac	3.08
PF00355	Rieske	2.31
PF07883	Cupin_2	2.31
PF15902	Sortilin-Vps10	2.31
PF13387	DUF4105	1.54
PF06808	DctM	1.54
PF13533	Biotin_lipoyl_2	1.54
PF12973	Cupin_7	0.77
PF09594	GT87	0.77
PF13450	NAD_binding_8	0.77
PF00408	PGM_PMM_IV	0.77
PF04909	Amidohydro_2	0.77
PF02776	TPP_enzyme_N	0.77
PF01883	FeS_assembly_P	0.77
PF03992	ABM	0.77
PF02826	2-Hacid_dh_C	0.77
PF01738	DLH	0.77
PF16576	HlyD_D23	0.77
PF03167	UDG	0.77
PF02775	TPP_enzyme_C	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	12.31
COG5517	3-phenylpropionate/cinnamic acid dioxygenase, small subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	8.46
COG4423	Uncharacterized conserved protein	Function unknown [S]	3.08
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.77
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.77
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.77
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.77
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.15 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.15 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.15 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.23 %
Unclassified	root	N/A	33.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.46 %
Unclassified	root	N/A	33.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.77 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.77 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %
Pararhodospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum	0.77 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	0.77 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.77 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.77 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.77 %
Acidisoma cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	0.77 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.77 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.77 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.85 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	3.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %
Bradyrhizobium sp. STM 3809	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3809	0.77 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.77 %
Acidisoma cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	0.77 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.77 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.77 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10666067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300005175\|Ga0066673_10711590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005446\|Ga0066686_10750814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300005552\|Ga0066701_10176188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1301	Open in IMG/M
3300005560\|Ga0066670_10159344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326	Open in IMG/M
3300006755\|Ga0079222_11425619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300010048\|Ga0126373_11871670	Not Available	663	Open in IMG/M
3300010048\|Ga0126373_12077687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300010359\|Ga0126376_12718010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300010360\|Ga0126372_13273327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300010361\|Ga0126378_10032857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4665	Open in IMG/M
3300010361\|Ga0126378_10662592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1156	Open in IMG/M
3300010361\|Ga0126378_11171564	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300010361\|Ga0126378_12221446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300010366\|Ga0126379_10325198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1556	Open in IMG/M
3300010376\|Ga0126381_101374873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300010379\|Ga0136449_100599182	Not Available	1879	Open in IMG/M
3300010398\|Ga0126383_13363507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300012929\|Ga0137404_12148756	Not Available	522	Open in IMG/M
3300016270\|Ga0182036_10862650	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300016294\|Ga0182041_10948310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300016294\|Ga0182041_11274195	Not Available	672	Open in IMG/M
3300016319\|Ga0182033_10778186	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300016371\|Ga0182034_10187349	Not Available	1590	Open in IMG/M
3300016387\|Ga0182040_10385845	Not Available	1095	Open in IMG/M
3300016387\|Ga0182040_10587720	Not Available	900	Open in IMG/M
3300016404\|Ga0182037_11720774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300017933\|Ga0187801_10138270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	943	Open in IMG/M
3300017933\|Ga0187801_10193028	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300021178\|Ga0210408_10799227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300021476\|Ga0187846_10028565	All Organisms → cellular organisms → Bacteria → Proteobacteria	2544	Open in IMG/M
3300021560\|Ga0126371_10031394	All Organisms → cellular organisms → Bacteria	4977	Open in IMG/M
3300027703\|Ga0207862_1042719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1366	Open in IMG/M
3300027768\|Ga0209772_10228179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	591	Open in IMG/M
3300027824\|Ga0209040_10007842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7660	Open in IMG/M
3300030740\|Ga0265460_10077933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1433	Open in IMG/M
3300031543\|Ga0318516_10134458	Not Available	1416	Open in IMG/M
3300031543\|Ga0318516_10421976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	768	Open in IMG/M
3300031543\|Ga0318516_10572199	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300031545\|Ga0318541_10004267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5861	Open in IMG/M
3300031545\|Ga0318541_10436350	Not Available	732	Open in IMG/M
3300031545\|Ga0318541_10532430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300031546\|Ga0318538_10145238	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300031546\|Ga0318538_10720739	Not Available	541	Open in IMG/M
3300031561\|Ga0318528_10063849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1886	Open in IMG/M
3300031561\|Ga0318528_10105632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300031561\|Ga0318528_10138592	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300031561\|Ga0318528_10759347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300031640\|Ga0318555_10395139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	749	Open in IMG/M
3300031668\|Ga0318542_10180121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1060	Open in IMG/M
3300031668\|Ga0318542_10567232	Not Available	591	Open in IMG/M
3300031679\|Ga0318561_10226451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017	Open in IMG/M
3300031679\|Ga0318561_10252959	Not Available	961	Open in IMG/M
3300031680\|Ga0318574_10927790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031681\|Ga0318572_10354560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	870	Open in IMG/M
3300031708\|Ga0310686_107754158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1255	Open in IMG/M
3300031708\|Ga0310686_118983759	Not Available	517	Open in IMG/M
3300031719\|Ga0306917_10191143	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300031719\|Ga0306917_10599643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300031736\|Ga0318501_10322231	Not Available	827	Open in IMG/M
3300031747\|Ga0318502_10340535	Not Available	886	Open in IMG/M
3300031747\|Ga0318502_11038940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300031748\|Ga0318492_10142137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1206	Open in IMG/M
3300031748\|Ga0318492_10491019	Not Available	651	Open in IMG/M
3300031751\|Ga0318494_10019740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	3331	Open in IMG/M
3300031763\|Ga0318537_10208527	Not Available	727	Open in IMG/M
3300031764\|Ga0318535_10412422	Not Available	602	Open in IMG/M
3300031768\|Ga0318509_10481173	Not Available	694	Open in IMG/M
3300031770\|Ga0318521_10358394	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300031770\|Ga0318521_10587337	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300031770\|Ga0318521_10670511	Not Available	629	Open in IMG/M
3300031771\|Ga0318546_10021403	All Organisms → cellular organisms → Bacteria → Proteobacteria	3704	Open in IMG/M
3300031771\|Ga0318546_10387532	Not Available	975	Open in IMG/M
3300031777\|Ga0318543_10396863	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300031779\|Ga0318566_10288924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300031781\|Ga0318547_10860921	Not Available	565	Open in IMG/M
3300031782\|Ga0318552_10151645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1164	Open in IMG/M
3300031792\|Ga0318529_10027993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2311	Open in IMG/M
3300031793\|Ga0318548_10013008	Not Available	3329	Open in IMG/M
3300031796\|Ga0318576_10168457	Not Available	1026	Open in IMG/M
3300031797\|Ga0318550_10086921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1460	Open in IMG/M
3300031797\|Ga0318550_10143716	Not Available	1144	Open in IMG/M
3300031805\|Ga0318497_10120693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1419	Open in IMG/M
3300031819\|Ga0318568_10640618	Not Available	661	Open in IMG/M
3300031819\|Ga0318568_10707269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300031846\|Ga0318512_10270880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300031846\|Ga0318512_10420084	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300031879\|Ga0306919_10207134	Not Available	1460	Open in IMG/M
3300031879\|Ga0306919_10415947	Not Available	1032	Open in IMG/M
3300031879\|Ga0306919_10852018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300031880\|Ga0318544_10402282	Not Available	532	Open in IMG/M
3300031890\|Ga0306925_10033987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5230	Open in IMG/M
3300031890\|Ga0306925_10210538	Not Available	2097	Open in IMG/M
3300031893\|Ga0318536_10258540	Not Available	885	Open in IMG/M
3300031893\|Ga0318536_10285589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300031893\|Ga0318536_10429237	Not Available	666	Open in IMG/M
3300031894\|Ga0318522_10388186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300031941\|Ga0310912_10634523	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031941\|Ga0310912_11227181	Not Available	570	Open in IMG/M
3300031942\|Ga0310916_10109071	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300031945\|Ga0310913_10675586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300031946\|Ga0310910_10302769	Not Available	1258	Open in IMG/M
3300031946\|Ga0310910_10732846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300031946\|Ga0310910_11136884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031947\|Ga0310909_10174922	Not Available	1775	Open in IMG/M
3300031954\|Ga0306926_10647273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1286	Open in IMG/M
3300031981\|Ga0318531_10148451	Not Available	1050	Open in IMG/M
3300032001\|Ga0306922_10012151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8452	Open in IMG/M
3300032001\|Ga0306922_10269149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1831	Open in IMG/M
3300032041\|Ga0318549_10166866	Not Available	984	Open in IMG/M
3300032043\|Ga0318556_10070126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1733	Open in IMG/M
3300032044\|Ga0318558_10497323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300032051\|Ga0318532_10096087	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300032054\|Ga0318570_10032035	Not Available	2092	Open in IMG/M
3300032054\|Ga0318570_10490045	Not Available	561	Open in IMG/M
3300032059\|Ga0318533_10562297	Not Available	836	Open in IMG/M
3300032063\|Ga0318504_10511236	Not Available	576	Open in IMG/M
3300032064\|Ga0318510_10525546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300032065\|Ga0318513_10617139	Not Available	531	Open in IMG/M
3300032067\|Ga0318524_10505710	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032068\|Ga0318553_10474797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	655	Open in IMG/M
3300032076\|Ga0306924_10186395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3809	2381	Open in IMG/M
3300032076\|Ga0306924_11699638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300032090\|Ga0318518_10136677	Not Available	1240	Open in IMG/M
3300032091\|Ga0318577_10381338	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300032094\|Ga0318540_10229560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300032261\|Ga0306920_103026457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300033289\|Ga0310914_10674057	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300033289\|Ga0310914_10909332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300033290\|Ga0318519_10214793	Not Available	1102	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.92%
Aquatic	Environmental → Aquatic	3.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Freshwater	Environmental → Aquatic → Freshwater	3.08%
Cave	Environmental → Terrestrial → Cave	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.08%
Loam	Environmental → Terrestrial → Soil → Loam	2.31%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	62.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_106660671	3300004633	Tropical Forest Soil	MFYIGYQASRFRARTINVGVIPSIAAQALTYCEENPDRSVVEAFGDAYLRTRR*
Ga0066673_107115901	3300005175	Soil	MFYIGYQASRLRATTINVGVIPSIEAQALTYCQENPDRPVAQAFAQAYSRTR*
Ga0066686_107508141	3300005446	Soil	DRAAASMFYIGYQASRLRATTINVGVIPNIQAQALTYCQENPDRPVAQAFAQAYLRTR*
Ga0066701_101761884	3300005552	Soil	MFYIGYQASRLRATTINVGVIPSIQAQALTYCQENPDRPVAQAFAQAYSRTR*
Ga0066670_101593442	3300005560	Soil	MFYIGYQASRFRATTINVGAIPSIQAQALTYCQENPDGTVAQAFAQAYS
Ga0079222_114256191	3300006755	Agricultural Soil	MFYIGYQASRLRATTINVGVIPSIEAQAVIYCQQNPDQPVARAFAQAYS
Ga0126373_118716702	3300010048	Tropical Forest Soil	MRLSEEDRAAAAMFYIGYQASRSRARTIDVSLIPSIEAQAFVYCQENPSEPLVRAFARAYSEAAR*
Ga0126373_120776871	3300010048	Tropical Forest Soil	ALCGDLLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAKAYLEARR*
Ga0126376_127180101	3300010359	Tropical Forest Soil	ESPPVDHIVYIRRASCQDLLNLTPEDRAAASMFYIGYQAARLRSRSINVGVIPSIEAQAFAYCQEDPDRPVAQAFAKAYSVARK*
Ga0126372_132733271	3300010360	Tropical Forest Soil	DDLLKLSAEDRASASMFYIGYQASRFRARTINVGVIPSVEAQALTYCAENPDRPVAQAFAEAYSRTQR*
Ga0126378_100328571	3300010361	Tropical Forest Soil	LAPEDRAAASMFYIGYQAARFRAGSINVGMIPSIQAQALAYCEENSDRTVVQAFAEAYSAARR*
Ga0126378_106625922	3300010361	Tropical Forest Soil	MFYIGYQASRIRARTINVGVIPSIEAQALTYCEENPDRSVVEAFGDAYLRTRR*
Ga0126378_111715643	3300010361	Tropical Forest Soil	GLAPDDRAAATMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYLEARR*
Ga0126378_122214461	3300010361	Tropical Forest Soil	LAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAKAYLEARR*
Ga0126379_103251982	3300010366	Tropical Forest Soil	MFYIGYQASRFRARTINVGVIPSIEAQALTYCEENPDRSVVEAFGDAYLRTRR*
Ga0126381_1013748731	3300010376	Tropical Forest Soil	MFYIGYQASRFRARTINVSVIPSIEAQALTYCEENPHRSVIEAFGDAYLRTRS*
Ga0136449_1005991822	3300010379	Peatlands Soil	MFYVGYSASHFRARTINVSVIPSIEAQAVTYCQENPGWSAALAFAQAYLRARS*
Ga0126383_133635071	3300010398	Tropical Forest Soil	EDRAAASMFYIGYQASRFRARTINVSVIPSIEAQALTYCEENPHRSVIEAFGDAYLRTRS
Ga0137404_121487561	3300012929	Vadose Zone Soil	AATMFYIGYQASRFRATTINVGAIPSIQAQALTYCQENPDEPVAQAIAQAYSRTRR*
Ga0182036_108626503	3300016270	Soil	RLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0182041_109483101	3300016294	Soil	MRLAADDRAAATMFYIGYQASHFRARTVNVALIPSIEAQALTYCDENPDRPVVQAFSEAFLEARR
Ga0182041_112741951	3300016294	Soil	DRAAATMFYIGYQASRFRASTIDVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARE
Ga0182033_107781863	3300016319	Soil	LAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0182034_101873493	3300016371	Soil	MFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0182040_103858452	3300016387	Soil	DHIVNIRGARCGDLLRLAPDDRVAATMFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0182040_105877201	3300016387	Soil	TMFYIGYQASRFRASTIDVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0182037_117207741	3300016404	Soil	MRLAADDRAAATMFYIGYQASHFRAGTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0187801_101382703	3300017933	Freshwater Sediment	PEDRAAAAMFYVGYQASRFRARTINVAVIPSIEAQAVAYCQENPDWSVAGAFAQAYLRTR
Ga0187801_101930281	3300017933	Freshwater Sediment	MFYVGYQASHSGARTINVGVIPSIEAQAVTYCQENPNWTIVQAFAQAYSRARS
Ga0210408_107992272	3300021178	Soil	AAASMFYIGYQASRLRASTINVGVIPSIEEQAITYCEENPDRTVAQAFAHAYSRARRQ
Ga0187846_100285651	3300021476	Biofilm	SPDDRDAASMFYIGYQASRFRARTINVGLIPSIEAQAVTYCAENPRRPVAQAFAEAYSRTPR
Ga0126371_100313946	3300021560	Tropical Forest Soil	LAPEDRAAASMFYIGYQAARFRAGSINVGMIPSIQAQALAYCEENSDRTVVQAFAEAYSAARR
Ga0207862_10427191	3300027703	Tropical Forest Soil	TLPPDDRAAASMFYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0209772_102281791	3300027768	Bog Forest Soil	YQASRLRATTINVGVIPSIEDQALIYCQENPDEPVAQAFAQAYLRTR
Ga0209040_100078421	3300027824	Bog Forest Soil	MFYIGYQASRLRARTINVGLIPSIEEQAISYCEENPDRTAVQAYANA
Ga0265460_100779332	3300030740	Soil	MFYVGYQASRFGARTINVSVIPSIEAQAVTYCQENPDWSAAQAFAQAYLRTRS
Ga0318516_101344581	3300031543	Soil	LRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0318516_104219763	3300031543	Soil	FYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318516_105721993	3300031543	Soil	VDHIVSIRGALCGDLLKLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0318541_100042674	3300031545	Soil	MFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318541_104363502	3300031545	Soil	AASMFYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318541_105324304	3300031545	Soil	LMSLSPEDRAAASMFYIGYQASRLRARTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0318538_101452384	3300031546	Soil	YQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318538_107207391	3300031546	Soil	MRLAADDRAAATMFYIGYQASHFPARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAF
Ga0318528_100638491	3300031561	Soil	SPEDRAAASMFYIGYQASRLRARTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0318528_101056322	3300031561	Soil	MRLAADDRAAATMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318528_101385923	3300031561	Soil	FYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0318528_107593471	3300031561	Soil	ESGPVDHIVSIRGALCGDMLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0318555_103951393	3300031640	Soil	YQASHFRARTINVVLIPSIEAQALTYCDENPDRPVVQAFSEAFLEARR
Ga0318542_101801211	3300031668	Soil	FYIGYQASRLRARTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0318542_105672322	3300031668	Soil	MFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318561_102264511	3300031679	Soil	YQAARLRARSINVGVIPSIQAQAFAYCQEDPDRPVAQAFAEAYSLARR
Ga0318561_102529591	3300031679	Soil	TMFYIGYQASRFHARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYLEARR
Ga0318574_109277902	3300031680	Soil	MRLAADDRAAATMFYIGYQASHFRARTINVALIPSIEAQALPYCEENPDRPVVQAFSEAFLEARR
Ga0318572_103545603	3300031681	Soil	MFYIGYQASHFPARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0310686_1077541582	3300031708	Soil	LSPEDRAAASMFYIGYQASHFRARTINVGVIPSIEAQAVTYCQENPNWSVAQAFAQAYLRARS
Ga0310686_1189837591	3300031708	Soil	MFYVGYQASQFHARTINVSVIPSIEAQAVTYCQENPDWSAAQAFAQAYLRARS
Ga0306917_101911432	3300031719	Soil	MRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0306917_105996431	3300031719	Soil	MRLAADDRAAATMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEA
Ga0318501_103222311	3300031736	Soil	VEIRRAGCQNLLTLPTDDRAAASMFYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318502_103405352	3300031747	Soil	FMRLAADDRAAATMFYIGYQTSHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318502_110389402	3300031747	Soil	APDDRVAATMFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318492_101421371	3300031748	Soil	ASCQDLLNLTPEDRAAASMFYIGYQAARLRARSINVGVIPSIQAQAFAYCQEDPDRPVAQAFAEAYSLARR
Ga0318492_104910192	3300031748	Soil	GYQAARFRSRTINVGGIPSIEAQALTYCQDHPDQTVAQAFAQAYSRARR
Ga0318494_100197404	3300031751	Soil	MFYIGYQASHFRASTIDVGLIPSIEAQALTYCTENPNRTVAQAFAEAYLRTRK
Ga0318537_102085271	3300031763	Soil	AASMFYIGYQAARFRSRTISVGEIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318535_104124221	3300031764	Soil	VDHIVNIRGARCGDFMRLAADDRAAATMFYIGYQASHFPARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318509_104811732	3300031768	Soil	PPDDRAAASMFYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318521_103583942	3300031770	Soil	FYIGYQASRFRSKTINVALIPSIEGQALAYCEENPDRTVVQAFAKAYSEARR
Ga0318521_105873372	3300031770	Soil	TMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAGAYSAARE
Ga0318521_106705112	3300031770	Soil	MFYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318546_100214036	3300031771	Soil	ASMFYIGYQASRLRARTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0318546_103875322	3300031771	Soil	YQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318543_103968632	3300031777	Soil	SPPGDHLVYIRRASCQDLLNLTPEDRAAASMFYIGYQAARLRARSINVGVIPSIQAQAFAYCQEDPDRPVAQAFAEAYSLARR
Ga0318566_102889241	3300031779	Soil	MRLAADDRAAAAMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318547_108609211	3300031781	Soil	AMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318552_101516453	3300031782	Soil	TMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318529_100279932	3300031792	Soil	LAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318548_100130082	3300031793	Soil	FYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318576_101684572	3300031796	Soil	DFLRLAQDDRAAATMFYIGYQASRFHARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318550_100869211	3300031797	Soil	TPEDRAAASMFYIGYQAARLRARSINVGVIPSIQAQAFAYCQEDPDRPVAQAFAEAYSLARR
Ga0318550_101437162	3300031797	Soil	QASRFRASTIDVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318497_101206931	3300031805	Soil	YIGYQASRFRSKTINVALIPSIEGQALAYCEENPDRTVVQAFAKAYSEARR
Ga0318568_106406182	3300031819	Soil	FYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318568_107072691	3300031819	Soil	DDRVAATMFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318512_102708801	3300031846	Soil	MFYIGYQASRLRARTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0318512_104200841	3300031846	Soil	SMFYIGYQAYRLRATTINVAVIPSIEDQALIYCQENPNERVYQAFAQAYLRNR
Ga0306919_102071342	3300031879	Soil	YIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0306919_104159471	3300031879	Soil	MRLAADDRAAATMFYIGYQASHFPARTINVALIPSIEAQALTYCEENPDRPVVQAFSEA
Ga0306919_108520181	3300031879	Soil	RLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0318544_104022821	3300031880	Soil	FYIGYQASRFRASTIDVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0306925_100339873	3300031890	Soil	MLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0306925_102105382	3300031890	Soil	MFYIGYQASRFHARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYLEARR
Ga0318536_102585401	3300031893	Soil	QAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318536_102855891	3300031893	Soil	IVNIRGARCGDLLRLAPDDRVAATMFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318536_104292371	3300031893	Soil	FYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0318522_103881862	3300031894	Soil	TMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0310912_106345232	3300031941	Soil	ARCGDFMRLAADDRAAATMFYIGYQASHFRARTINVVLIPSIEAQALTYCDENPDRPIVQAFSEAFLEARR
Ga0310912_112271812	3300031941	Soil	GYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0310916_101090713	3300031942	Soil	LKLSPDDLNAASMFYIGYQASHFRASTINVGLISSIEAQALTYCTENPNRTVAQAFAEAYLRTRK
Ga0310913_106755862	3300031945	Soil	MRLAADDRAAATMFYIGYQASHFRARTINVVLIPSIEAQALTYCDENPDRPVVQAFSEAFLEARR
Ga0310910_103027691	3300031946	Soil	MFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYLEARR
Ga0310910_107328461	3300031946	Soil	DHIVSIRGALCGDMLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0310910_111368841	3300031946	Soil	VDHIVSIRGALCGDLLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAGAYSAARE
Ga0310909_101749221	3300031947	Soil	DHIVNIRGARCGDLLRLAPDDRVAATMFYIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYLEARR
Ga0306926_106472733	3300031954	Soil	MRLAADDRAAATMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFFEARR
Ga0318531_101484512	3300031981	Soil	IGYQASRFHARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYLEARR
Ga0306922_100121511	3300032001	Soil	TAESGPVDHIVSIRGALCGDMLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0306922_102691491	3300032001	Soil	RAAATMFYIGYQASRFRSKTINVALIPSIEGQALAYCEENPGRTVVQAFAKAYLEARR
Ga0318549_101668661	3300032041	Soil	DDRAAATMFYIGYQASRFRASTIDVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318556_100701264	3300032043	Soil	THTQPPAAPLQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318558_104973232	3300032044	Soil	NIQRARCGDLLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPTGCSGVF
Ga0318532_100960873	3300032051	Soil	IQRALCGDLMRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0318570_100320352	3300032054	Soil	MFYIGYQASRFRASTIDVALIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318570_104900451	3300032054	Soil	YIGYQASRFRARTINVAVIPSIEAQALTYCEENPDRPVVQAFAEAYSEARR
Ga0318533_105622972	3300032059	Soil	MRLAADDRAAATMFYIGYQASHFPARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0318504_105112361	3300032063	Soil	FYIGYQASRLGASTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0318510_105255462	3300032064	Soil	RRAGCQNLLTLPPDDRAAASMFYIGYQAARFRSRTISVGGIPSIEAQALTYCQEHPDQTVAQAFAQAYSRARR
Ga0318513_106171391	3300032065	Soil	YQASRFRARTIDVALIASIEAQALTYCEENPDRPVVQAFAEAYLEARR
Ga0318524_105057101	3300032067	Soil	CQDLLNLTPEDRAAASMFYIGYQAARLRARSINVGVIPSIQAQAFAYCQEDPDRPVAQAFAEAYSLARR
Ga0318553_104747971	3300032068	Soil	YIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVQAFSEAFLEARR
Ga0306924_101863951	3300032076	Soil	NAASMFYIGYQASHFRASTINVGLISSIEAQALTYCTENPNRTVAQAFAEAYLRTRK
Ga0306924_116996382	3300032076	Soil	APAESPPGDHLVYIRRASCQDLLNLTPEDRAAASMFYIGYQAARLRARSINVGVIPSIQAQAFAYCQEDPDRPVAQAFAEAYSLARR
Ga0318518_101366771	3300032090	Soil	VRIRGALCGDMLRLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR
Ga0318577_103813383	3300032091	Soil	CGDLLKLAPDDRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAARR
Ga0318540_102295601	3300032094	Soil	SMFYIGYQASRLRARTINVGVIPSIEEQAINYCEENPDRTVIQAFARAYLQTRK
Ga0306920_1030264571	3300032261	Soil	MFYIGYQAPRVRARTINVGVIPSIEAQAVTYCAENPRRTVAQAFAEAYSRTPSQR
Ga0310914_106740571	3300033289	Soil	DRAAATMFYIGYQASRFRARTINVALIPSIEAQALTYCEENPDRPVVQAFAEAYSAARR
Ga0310914_109093321	3300033289	Soil	MRLAADDRAAATMFYIGYQASHFRARTINVALIPSIEAQALTYCEENPDRPVVKAFSEAFLEAR
Ga0318519_102147931	3300033290	Soil	YQASRFRARTINVALIPSIEAQALTYCEENPERPVVQAFAAAYSEARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062648

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences