Metagenome / Metatranscriptome Family F062592

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062592
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	79 residues
Representative Sequence	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
Number of Associated Samples	118
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.31 %
% of genes near scaffold ends (potentially truncated)	23.85 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (26.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.75% β-sheet: 0.00% Coil/Unstructured: 16.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF12838	Fer4_7	6.92
PF13370	Fer4_13	3.85
PF04355	SmpA_OmlA	1.54
PF00313	CSD	1.54
PF01058	Oxidored_q6	1.54
PF01553	Acyltransferase	1.54
PF13650	Asp_protease_2	0.77
PF00892	EamA	0.77
PF02517	Rce1-like	0.77
PF04430	DUF498	0.77
PF00491	Arginase	0.77
PF04519	Bactofilin	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	1.54
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	1.54
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	1.54
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	1.54
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	1.54
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.77
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.77
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.77
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.77
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	81.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.54 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	81.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.31 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.77 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	70.00 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.85 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.31 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.77 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.77 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.00 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.08 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	2.31 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	0.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.77 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.77 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.00 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.08 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	2.31 %
Spartobacteria bacterium LR76	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium LR76	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.77 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.00 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3.08 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	2.31 %
Thermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus	0.77 %
Desulfitobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfitobacterium	0.77 %
Spartobacteria bacterium LR76	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium LR76	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.00 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3.08 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	2.31 %
Thermus igniterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus igniterrae	0.77 %
Desulfitobacterium hafniense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfitobacterium → Desulfitobacterium hafniense	0.77 %
Spartobacteria bacterium LR76	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium LR76	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002HM90K	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
2170459004\|F62QY1Z01BLVFH	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
2170459005\|F1BAP7Q01C1A2Z	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
2170459005\|F1BAP7Q02ISA65	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
2170459006\|GBPF9FW01AG22A	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
2170459006\|GBPF9FW01ER6DX	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
2170459006\|GBPF9FW02JKZM7	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
2170459007\|GJ61VE201AMJOD	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
2170459009\|GA8DASG01D90D3	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
2170459019\|G14TP7Y01CG7EM	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
2189573001\|GZR05M101EM5TB	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
2189573004\|GZGWRS402IBLET	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
2199352025\|deepsgr__Contig_13284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1000	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1017323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1000280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5631	Open in IMG/M
3300000754\|JGI11851J11668_1000899	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1179	Open in IMG/M
3300002899\|JGIcombinedJ43975_10069548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfitobacterium → Desulfitobacterium hafniense	613	Open in IMG/M
3300002911\|JGI25390J43892_10017988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1691	Open in IMG/M
3300005166\|Ga0066674_10077367	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300005174\|Ga0066680_10591200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus igniterrae	696	Open in IMG/M
3300005175\|Ga0066673_10193422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1157	Open in IMG/M
3300005181\|Ga0066678_10328709	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005289\|Ga0065704_10013183	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300005293\|Ga0065715_10688909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300005294\|Ga0065705_10019256	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300005445\|Ga0070708_101566156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300005467\|Ga0070706_100193394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1901	Open in IMG/M
3300005518\|Ga0070699_102157205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300005536\|Ga0070697_100777613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300005554\|Ga0066661_10080168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1922	Open in IMG/M
3300005558\|Ga0066698_10447087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	882	Open in IMG/M
3300005559\|Ga0066700_10016928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3975	Open in IMG/M
3300005576\|Ga0066708_10616340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300005764\|Ga0066903_103970426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300005983\|Ga0081540_1066690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1685	Open in IMG/M
3300006797\|Ga0066659_10302313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1221	Open in IMG/M
3300006852\|Ga0075433_10381758	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300006854\|Ga0075425_103037098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300007255\|Ga0099791_10051243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1849	Open in IMG/M
3300009094\|Ga0111539_11670934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300009162\|Ga0075423_11225005	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300009162\|Ga0075423_11264976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	788	Open in IMG/M
3300010043\|Ga0126380_10184472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1379	Open in IMG/M
3300010047\|Ga0126382_11187028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300010048\|Ga0126373_11077955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	869	Open in IMG/M
3300010048\|Ga0126373_11182816	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300010159\|Ga0099796_10412300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300010301\|Ga0134070_10098550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1018	Open in IMG/M
3300010321\|Ga0134067_10445383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300010325\|Ga0134064_10048666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1295	Open in IMG/M
3300010329\|Ga0134111_10163720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300010336\|Ga0134071_10472240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300010337\|Ga0134062_10247333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300010360\|Ga0126372_12331213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300010361\|Ga0126378_12914261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300010362\|Ga0126377_10133564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2310	Open in IMG/M
3300010366\|Ga0126379_10403643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1415	Open in IMG/M
3300010376\|Ga0126381_100796644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1356	Open in IMG/M
3300010376\|Ga0126381_104343556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300010398\|Ga0126383_10795823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1028	Open in IMG/M
3300012198\|Ga0137364_10182562	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300012207\|Ga0137381_10581808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	976	Open in IMG/M
3300012350\|Ga0137372_10716979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300012685\|Ga0137397_10104427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2079	Open in IMG/M
3300012884\|Ga0157300_1085442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300012915\|Ga0157302_10339361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300012918\|Ga0137396_10062314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2588	Open in IMG/M
3300012922\|Ga0137394_10036586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4010	Open in IMG/M
3300012924\|Ga0137413_10687471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	775	Open in IMG/M
3300012948\|Ga0126375_10191231	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300012948\|Ga0126375_10411017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	981	Open in IMG/M
3300012958\|Ga0164299_10603970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300012961\|Ga0164302_10389972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	946	Open in IMG/M
3300012971\|Ga0126369_11795265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300013096\|Ga0157307_1165592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300014154\|Ga0134075_10369750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	630	Open in IMG/M
3300014166\|Ga0134079_10231082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300014497\|Ga0182008_10157338	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300016270\|Ga0182036_11091850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660	Open in IMG/M
3300016294\|Ga0182041_10992460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300016319\|Ga0182033_10282691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1362	Open in IMG/M
3300016371\|Ga0182034_10336966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1220	Open in IMG/M
3300016371\|Ga0182034_11348544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300016404\|Ga0182037_10049210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2807	Open in IMG/M
3300016445\|Ga0182038_11048568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300019356\|Ga0173481_10659480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300019361\|Ga0173482_10300496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300019362\|Ga0173479_10248584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300019867\|Ga0193704_1012361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1723	Open in IMG/M
3300019869\|Ga0193705_1005603	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300019875\|Ga0193701_1015109	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300019881\|Ga0193707_1001222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9309	Open in IMG/M
3300019885\|Ga0193747_1000481	All Organisms → cellular organisms → Bacteria	13293	Open in IMG/M
3300019996\|Ga0193693_1045047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300020001\|Ga0193731_1011856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2245	Open in IMG/M
3300020002\|Ga0193730_1051992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1181	Open in IMG/M
3300021510\|Ga0222621_1074329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300021560\|Ga0126371_11419515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300022534\|Ga0224452_1000162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13270	Open in IMG/M
3300026277\|Ga0209350_1014348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2502	Open in IMG/M
3300026304\|Ga0209240_1072684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1277	Open in IMG/M
3300026334\|Ga0209377_1109862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1128	Open in IMG/M
3300026342\|Ga0209057_1185319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	597	Open in IMG/M
3300026498\|Ga0257156_1006186	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300026693\|Ga0208709_105511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300026791\|Ga0208072_102872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300026791\|Ga0208072_107148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300027018\|Ga0208475_1006303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1168	Open in IMG/M
3300027682\|Ga0209971_1052521	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300027748\|Ga0209689_1042223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2615	Open in IMG/M
3300028711\|Ga0307293_10059274	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300028716\|Ga0307311_10160835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300028878\|Ga0307278_10388262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300030844\|Ga0075377_10040699	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300030844\|Ga0075377_10052994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300030916\|Ga0075386_10035180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2246	Open in IMG/M
3300031231\|Ga0170824_126951596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300031573\|Ga0310915_10056723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2546	Open in IMG/M
3300031719\|Ga0306917_10147039	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1745	Open in IMG/M
3300031720\|Ga0307469_10620326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300031820\|Ga0307473_10615521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-21	752	Open in IMG/M
3300031833\|Ga0310917_10339454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium LR76	1019	Open in IMG/M
3300031879\|Ga0306919_10848378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	701	Open in IMG/M
3300031890\|Ga0306925_10493588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1305	Open in IMG/M
3300031890\|Ga0306925_11451745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300031954\|Ga0306926_10300600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1986	Open in IMG/M
3300031954\|Ga0306926_10467266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1553	Open in IMG/M
3300032001\|Ga0306922_12012688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300032261\|Ga0306920_101066631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1173	Open in IMG/M
3300033412\|Ga0310810_10996362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.54%
Host-Associated	Host-Associated	7.69%
Engineered	Engineered	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.00%
Plants	Host-Associated → Plants	7.69%
Aquatic	Environmental → Aquatic	1.54%
Solid Waste	Engineered → Solid Waste	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.08%
Sediment	Environmental → Aquatic → Sediment	1.54%
Grass	Engineered → Solid Waste → Grass	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.77%
Loam	Environmental → Terrestrial → Soil → Loam	9.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.54%
Composting	Engineered → Solid Waste → Grass → Composting	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	6.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.15%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000754	Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TB	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026693	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN595 (SPAdes)	Environmental	Open in IMG/M
3300026791	Grasslands soil microbial communities from Kansas, USA that are Nitrogen fertilized - NN591 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_06269510	2170459003	Grass Soil	MDSSARAILLTISRCEGGIGPFQNANEKFSDLAHRNRHYQDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF
E4B_05037280	2170459004	Grass Soil	MPKEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
E41_09131910	2170459005	Grass Soil	MPNEKFSDLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSNAEKKAHAQLAEFMTKGF
E41_00822640	2170459005	Grass Soil	NQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDSYSYKSGMTSDAEKKAHAQLAEFMTKGF
L01_04215820	2170459006	Grass Soil	MPNEKFSDLADRIGRYQDDFAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
L01_04122400	2170459006	Grass Soil	MPNEKLSDLAHRIRHYQDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF
L01_04886700	2170459006	Grass Soil	MTGSARAVLWTISRCEGGIGPFQNANEKFSDLAHRIRRYEDDFPKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAERKRMRNSQSL
L02_01850290	2170459007	Grass Soil	QDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF
F47_11257230	2170459009	Grass Soil	MPNEKFSDLADRIRRYQDDFAKQAKELSELRSELARLKQILGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
4MG_03194370	2170459019	Switchgrass, Maize And Mischanthus Litter	GRIGPFQNANEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
FD2_01763920	2189573001	Grass Soil	MPNEKFSDLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
FG2_07946420	2189573004	Grass Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRAELARLKQIMSSVREALRCIDSYSYKGGMTSDAEKQAHAQLAEFMTKGF
deepsgr_02150700	2199352025	Soil	MPNEKFSDLAHRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
AF_2010_repII_A01DRAFT_10173232	3300000580	Forest Soil	MPTETFSELGHRIHRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKLGMTSDAEKKAHAQLAEFMNKGF*
KanNP_Total_noBrdU_T14TCDRAFT_10002806	3300000596	Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGSVREALRCIDSYSYKGGMTSDAEKKAHAQLAEFMTKGF*
JGI11851J11668_10008993	3300000754	Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGSVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
JGIcombinedJ43975_100695481	3300002899	Soil	MPNEKFSDWAHRIGRYEDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKRGMTSDAEKKAHAQLAEFMNKGF*
JGI25390J43892_100179882	3300002911	Grasslands Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVSEALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0066674_100773672	3300005166	Soil	MPNEKFSDLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0066680_105912001	3300005174	Soil	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF*
Ga0066673_101934223	3300005175	Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0066678_103287093	3300005181	Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVSEALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0065704_100131832	3300005289	Switchgrass Rhizosphere	MPNEKFSDLAHRIRRYXDDFAKQAXELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0065715_106889092	3300005293	Miscanthus Rhizosphere	MPNEKFSDLAHRIRRDQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0065705_100192563	3300005294	Switchgrass Rhizosphere	MPNEKFSDLAXRIRRYQDDFAKQAXELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0070708_1015661562	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEKFSDLAHRIRRYEDEFAKQAKELSELRSELARLKQIMGSVREALRCIDTYSYQGGMTSDAEKKAHAQLAEFMTKGF*
Ga0070706_1001933942	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0070699_1021572051	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGSVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0070697_1007776131	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	QDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0066661_100801681	3300005554	Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0066698_104470873	3300005558	Soil	MPNEKFSDLAHRIRRYQDDFAKQAKELSELRSELARLKQIMGSVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0066700_100169282	3300005559	Soil	MPNEKFSDLAHRIRRYQDDLAKQAKALSELRSELARVKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF*
Ga0066708_106163402	3300005576	Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVREALLCIDTYSYKRGMTSDAEKKAHAQLAEFMNKDF*
Ga0066903_1039704262	3300005764	Tropical Forest Soil	MPNEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0081540_10666901	3300005983	Tabebuia Heterophylla Rhizosphere	GHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKLGMTSDAEKKAHAQLAEFMNKGF*
Ga0066659_103023132	3300006797	Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVSEALRCIDTYSYKRGMTSDAEKKVHAQLAEFMTKGF*
Ga0075433_103817583	3300006852	Populus Rhizosphere	IRHYEDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0075425_1030370981	3300006854	Populus Rhizosphere	MPTETFSDLGHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0099791_100512432	3300007255	Vadose Zone Soil	MPNEKFSDLAHRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0111539_116709341	3300009094	Populus Rhizosphere	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMNKDF*
Ga0075423_112250051	3300009162	Populus Rhizosphere	KFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMATVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0075423_112649762	3300009162	Populus Rhizosphere	MPTETFSDLGHRIRRFQDDLAKQAKELSELKSELARLKQIMGTVREALRCIDTYSYKLGMTSDAEKKAHAQLAEFLNKGF*
Ga0126380_101844721	3300010043	Tropical Forest Soil	MPNEKFSDLAHRIRHYEDDLAKQAKELSEVRSELARLKQIMGTVREALRCIDTYSYKAGMTSDAEKKAHAQLAEFMTKGF*
Ga0126382_111870281	3300010047	Tropical Forest Soil	MPNEKFSDLAHRIRHYEDDLAKQAKELSEVRSELARLKQIMGTVREALRCIDTYSYKGGMTRDAEKKAHAQLAEFMTKGF*
Ga0126373_110779553	3300010048	Tropical Forest Soil	MPDETFSDLGHRIRRQQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYCYKRGMTSDAEKKAHAQLAEFMNKGF*
Ga0126373_111828161	3300010048	Tropical Forest Soil	MPNEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMNKGS*
Ga0099796_104123001	3300010159	Vadose Zone Soil	MPNEKFSDLAHRIRHYQGHLAKQAKELSELRSELARLKQIMSTGREALRCIDSYTYKCGMTSDAEKKAHARLAEFMTKGF*
Ga0134070_100985501	3300010301	Grasslands Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0134067_104453832	3300010321	Grasslands Soil	MPNEKFSDLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0134064_100486663	3300010325	Grasslands Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0134111_101637202	3300010329	Grasslands Soil	MPNEKFSDLAHRIRRNQDELAKQAKELSELRSVLARLKQIMGTVSEALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF*
Ga0134071_104722402	3300010336	Grasslands Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEF
Ga0134062_102473331	3300010337	Grasslands Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVSEALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTK
Ga0126372_123312131	3300010360	Tropical Forest Soil	MPTETFSELGHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYCYKRGMTSDAEKKAHAQLAEFMNKGF*
Ga0126378_129142611	3300010361	Tropical Forest Soil	MPTETFSELGHRIHRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMNKGF*
Ga0126377_101335642	3300010362	Tropical Forest Soil	MPNEKFSDLAHRIRRYDDDLAKQAKELSEVRSELARLKQIMGTVREALRCIDTYSYKAGMTSDAEKKAHAQLAEFMTKGF*
Ga0126379_104036432	3300010366	Tropical Forest Soil	MGHPKMPTEKFSELGHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYCYKRGMTSDAEKKAHAQLAEFMNKGF*
Ga0126381_1007966442	3300010376	Tropical Forest Soil	MPTETFSDLGHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYCYKRGMTSDAEKKAHAQLAEFMNKGF*
Ga0126381_1043435561	3300010376	Tropical Forest Soil	MPNEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAPLAEFMNKGF*
Ga0126383_107958232	3300010398	Tropical Forest Soil	MPTETFSELGHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMNKGF*
Ga0137364_101825621	3300012198	Vadose Zone Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGSVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMT
Ga0137381_105818081	3300012207	Vadose Zone Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGSVREALRCIDTYSYKGGMTSDAEKNAHAQLAEFMTKGF*
Ga0137372_107169791	3300012350	Vadose Zone Soil	FSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGSIREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0137397_101044273	3300012685	Vadose Zone Soil	MPNEKFSDLAHRIRHYQDNLAKQAKERSELRSELARLKQIMGTGREALRCIDTYTYKRGMTSDAEKKAHARLAEFMTKGF*
Ga0157300_10854421	3300012884	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0157302_103393611	3300012915	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFITKGF*
Ga0137396_100623141	3300012918	Vadose Zone Soil	MPNEKFSDLAHRIRHYQGHLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0137394_100365867	3300012922	Vadose Zone Soil	MPNEKFSDLAHRIRHYQGHLAKQAKELSELRSELARLKQIMGTGREALRCIDTYTYKCGMTSDEEKKTHAQLAEFMTKGF*
Ga0137413_106874712	3300012924	Vadose Zone Soil	MPNEKFSDLAHRIRHYQGHLAKQAKELSELRSELARLKQIMSTGREALRCIDTYTYKGGMTSDAEKKAHAQLAEFMNKDF*
Ga0126375_101912311	3300012948	Tropical Forest Soil	MPNEKFSDLAHRIRHYEDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSCKGGMTRDAEKKAHAQLAEFMTKGF*
Ga0126375_104110171	3300012948	Tropical Forest Soil	MPTETFSELGHRIHRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFINKGF*
Ga0164299_106039701	3300012958	Soil	MPNEKFSDLADRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0164302_103899722	3300012961	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0126369_117952651	3300012971	Tropical Forest Soil	MPTETFSELGHRIRRFQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKLGMTSDAEKKAHAQLAEFMNKGF*
Ga0157307_11655921	3300013096	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELKSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0134075_103697502	3300014154	Grasslands Soil	DLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0134079_102310822	3300014166	Grasslands Soil	MPNEKFSDLAHRIRRQQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF*
Ga0182008_101573381	3300014497	Rhizosphere	HQIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTDSYKGGMTSDAEKKAHAQLAEFMNKGF*
Ga0182036_110918502	3300016270	Soil	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTIREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0182041_109924602	3300016294	Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTIREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0182033_102826912	3300016319	Soil	MANEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIINTVREALRCIDTYSYKRGMTSDAEKKAHAQL
Ga0182034_103369661	3300016371	Soil	MPNEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0182034_113485442	3300016371	Soil	MPNEKFSDFAHRIRRYEDDLAKQAKELSELRSELARLKQIINTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0182037_100492104	3300016404	Soil	MANEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMNKDF
Ga0182038_110485681	3300016445	Soil	MPNEKFSDFAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAH
Ga0173481_106594801	3300019356	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0173482_103004961	3300019361	Soil	MPNEKFSDLAHRIRRYQDDFAKQAKELSELRSELARLKQIMATVREALRCIDTYSYKLGMTSDAEKKAHAQLAEFLNKGF
Ga0173479_102485841	3300019362	Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0193704_10123613	3300019867	Soil	MANEKFSDLAHRIRRFQDDLAKQTKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0193705_10056031	3300019869	Soil	MPNEKFSDLAHRIRRFQDDLAKQTKELAELRSELARLKQIMGTLREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNK
Ga0193701_10151091	3300019875	Soil	MANEKFSDLAHRIRRFQDDLAKQTKELAELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMN
Ga0193707_100122210	3300019881	Soil	MPNEKFSDLAHRIRHYQDNLAKQAKERSELRSELARLKQIMGTGREALRCIDTYTYKCGMTSDAEKKTHAQLAEFMTKGF
Ga0193747_100048113	3300019885	Soil	MPNEKFSDLAHRIRHYQDDLEKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0193693_10450471	3300019996	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYTYKGGMTSDAEKKAHAQLAEFMAKGF
Ga0193731_10118563	3300020001	Soil	MPNEKFSDLAHRIRHYQDNLAKQAKERSELRSELARLKQIMGTVREALRCIDTYTYKGGMTSDAEKKAHAQLAESMAKGF
Ga0193730_10519922	3300020002	Soil	MPNEKFSDLAHRIRHYQDNLAKQAKERSELRSELARLKQIMGTVREALRCIDTYTYKGGMTSDAEKKAHAQLAEFMAKGF
Ga0222621_10743291	3300021510	Groundwater Sediment	MANEKFSDLAHRIRRFQDDLAKQTKELAELRSELARLKQIMGTLREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0126371_114195151	3300021560	Tropical Forest Soil	MPNETFSDLGHRIRRQQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKLGMTSDAEKKAHAQLAEFMNKRF
Ga0224452_100016211	3300022534	Groundwater Sediment	MANEKFSDLAHRIRRFQDDLAKQTKELAELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0209350_10143486	3300026277	Grasslands Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVSEALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0209240_10726841	3300026304	Grasslands Soil	MPNEKFSDLAHRIRHYQDNLAKQAKERSELRSELARLKQIMGTGREALRCIDTYTYKCGMTSDEEKKTHAQLAEFMTKGF
Ga0209377_11098621	3300026334	Soil	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0209057_11853192	3300026342	Soil	DLAGRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0257156_10061863	3300026498	Soil	MPNEKFSDLADRIRRYEDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMIKGF
Ga0208709_1055111	3300026693	Soil	MPNEKFSDLAHRIRHYEDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0208072_1028721	3300026791	Soil	MPNEKFSDLAHRIRRYEDDFAKQAKELSELRSELARLKQIMGSVREALRCIDSYSYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0208072_1071482	3300026791	Soil	MPNEKFSDLAHRIRHYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKAGMTSDAEKKAHAQLAEFMTKDF
Ga0208475_10063031	3300027018	Soil	MPNEKFSDLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKRGMTSDAEKKAHAQLAEFMNKGV
Ga0209971_10525211	3300027682	Arabidopsis Thaliana Rhizosphere	MPNEKFSDLAHRIRRYEDEFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0209689_10422233	3300027748	Soil	MPNEKFSDLAHRIRRYQDDLAKQAKALSELRSELARVKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0307293_100592741	3300028711	Soil	RFQDDLAKQTKELAELRSELARLKQIMGTLREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0307311_101608351	3300028716	Soil	MPNEKFSDLAHRIRRFQDDLAKQTKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0307278_103882621	3300028878	Soil	FQDDLAKQTKELAELRSELARLKQIMGTLREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0075377_100406991	3300030844	Soil	MPNEKFSDLAHRNRHYQDDLAKQAKELSELKSELARLKQILGTVRQALRCIDTYTYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0075377_100529942	3300030844	Soil	MPNEKFSDLAHRIRRNQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0075386_100351801	3300030916	Soil	MPNEKISDLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFM
Ga0170824_1269515962	3300031231	Forest Soil	LTISRCEGEIGAFQKMPNEKFNDLAHRIRHYQDDLAKQAKELSELRSELTRLKQIMGTVREALRCIDTYTYKCGMTSDAEKKAHAQLAEFMTKGF
Ga0310915_100567233	3300031573	Soil	MPNEKFSDFAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0306917_101470392	3300031719	Soil	MPNEKFSDLAHRIRCNQDDLAKQAKELSELRSELARLKQIMGTIREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0307469_106203261	3300031720	Hardwood Forest Soil	MPNEKFSDLADRIRRYQDDFAKQAKELSELRSELARLKQIMGTVKEALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0307473_106155211	3300031820	Hardwood Forest Soil	DLAHRIRRYDDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF
Ga0310917_103394542	3300031833	Soil	MPNEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0306919_108483782	3300031879	Soil	GHPKMPNEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0306925_104935882	3300031890	Soil	MANEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMTKGF
Ga0306925_114517451	3300031890	Soil	DLAHRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0306926_103006001	3300031954	Soil	MANEKFSDLAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQLAEFMT
Ga0306926_104672661	3300031954	Soil	PNEKFSDLAHRIRCNQDDLAKQAKELSELRSELARLKQIMGTVREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0306922_120126881	3300032001	Soil	MPNEKFSDFAHRIRRYEDDLAKQAKELSELRSELARLKQIMDTVREALRCIDTYSYKRGMTSDAEKKAHAQL
Ga0306920_1010666311	3300032261	Soil	MPNEKFSDLAHRIRCNQDDLAKQAQELSELRSELARLKQIMGTIREALQCIDTYSYKGGMTSDAEKKAHAQLAEFMNKDF
Ga0310810_109963621	3300033412	Soil	MPNEKFSDLADRIRRYQDDLAKQAKELSELRSELARLKQIMGTVREALRCIDTYSYKGGMTSDAEKKAHAQLAEFMTKGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062592

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences