Metagenome Family F062562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062562
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	45 residues
Representative Sequence	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR
Number of Associated Samples	87
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.38 %
% of genes near scaffold ends (potentially truncated)	51.54 %
% of genes from short scaffolds (< 2000 bps)	83.85 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.692 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.539 % of family members)
Environment Ontology (ENVO)	Unclassified (50.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.89% β-sheet: 13.33% Coil/Unstructured: 37.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01740	STAS	9.23
PF10987	DUF2806	2.31
PF03301	Trp_dioxygenase	2.31
PF08530	PepX_C	2.31
PF13466	STAS_2	1.54
PF00924	MS_channel	1.54
PF00561	Abhydrolase_1	0.77
PF02353	CMAS	0.77
PF08241	Methyltransf_11	0.77
PF00069	Pkinase	0.77
PF14534	DUF4440	0.77
PF01965	DJ-1_PfpI	0.77
PF02796	HTH_7	0.77
PF03631	Virul_fac_BrkB	0.77
PF00563	EAL	0.77
PF06537	DHOR	0.77
PF14559	TPR_19	0.77
PF07238	PilZ	0.77
PF13620	CarboxypepD_reg	0.77
PF13545	HTH_Crp_2	0.77
PF00196	GerE	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.08
COG2936	Predicted acyl esterase	General function prediction only [R]	2.31
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	2.31
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.54
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.54
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.77
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.77
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.77
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.77
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.77
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.77
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.77
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.77
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.69 %
Unclassified	root	N/A	32.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.69 %
Unclassified	root	N/A	32.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.69 %
Unclassified	root	N/A	32.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.69 %
Unclassified	root	N/A	32.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.00 %
Unclassified	root	N/A	32.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.00 %
Unclassified	root	N/A	32.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.31 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.00 %
Unclassified	root	N/A	32.31 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.31 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.77 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.00 %
Unclassified	root	N/A	32.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.31 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.54 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.77 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.77 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.00 %
Unclassified	root	N/A	32.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.31 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	1.54 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.77 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.77 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.00 %
Unclassified	root	N/A	32.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.31 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.54 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.77 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.77 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01DWE7E	Not Available	529	Open in IMG/M
3300002558\|JGI25385J37094_10021555	Not Available	2298	Open in IMG/M
3300002561\|JGI25384J37096_10086605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1121	Open in IMG/M
3300002909\|JGI25388J43891_1002860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3569	Open in IMG/M
3300002911\|JGI25390J43892_10089389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005166\|Ga0066674_10063567	Not Available	1682	Open in IMG/M
3300005171\|Ga0066677_10428458	Not Available	756	Open in IMG/M
3300005171\|Ga0066677_10706708	Not Available	563	Open in IMG/M
3300005172\|Ga0066683_10081473	All Organisms → cellular organisms → Bacteria → Acidobacteria	1950	Open in IMG/M
3300005172\|Ga0066683_10324107	Not Available	957	Open in IMG/M
3300005172\|Ga0066683_10443818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300005172\|Ga0066683_10633514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300005179\|Ga0066684_10778338	Not Available	634	Open in IMG/M
3300005180\|Ga0066685_10667770	Not Available	714	Open in IMG/M
3300005180\|Ga0066685_10779546	Not Available	649	Open in IMG/M
3300005181\|Ga0066678_11029593	Not Available	532	Open in IMG/M
3300005439\|Ga0070711_101163761	Not Available	666	Open in IMG/M
3300005447\|Ga0066689_10302911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300005447\|Ga0066689_10565286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005467\|Ga0070706_100676620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	958	Open in IMG/M
3300005467\|Ga0070706_101794538	Not Available	558	Open in IMG/M
3300005468\|Ga0070707_101777854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005471\|Ga0070698_100661956	Not Available	985	Open in IMG/M
3300005536\|Ga0070697_100266546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300005536\|Ga0070697_100271224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1454	Open in IMG/M
3300005536\|Ga0070697_100511856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1050	Open in IMG/M
3300005536\|Ga0070697_100603769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	965	Open in IMG/M
3300005536\|Ga0070697_100630042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300005536\|Ga0070697_101111446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300005540\|Ga0066697_10064349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2097	Open in IMG/M
3300005552\|Ga0066701_10620311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300005554\|Ga0066661_10217012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300005555\|Ga0066692_10119427	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587	Open in IMG/M
3300005555\|Ga0066692_10553064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	727	Open in IMG/M
3300005558\|Ga0066698_10149025	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300005559\|Ga0066700_11042750	Not Available	536	Open in IMG/M
3300005568\|Ga0066703_10388793	Not Available	836	Open in IMG/M
3300005569\|Ga0066705_10033286	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300005569\|Ga0066705_10661541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300005574\|Ga0066694_10211025	Not Available	921	Open in IMG/M
3300006028\|Ga0070717_10019479	All Organisms → cellular organisms → Bacteria	5321	Open in IMG/M
3300006028\|Ga0070717_10147947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	2030	Open in IMG/M
3300006028\|Ga0070717_10237754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300006028\|Ga0070717_11132604	Not Available	712	Open in IMG/M
3300006032\|Ga0066696_10151590	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300006032\|Ga0066696_10925226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006804\|Ga0079221_10174731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1151	Open in IMG/M
3300006852\|Ga0075433_11335305	Not Available	621	Open in IMG/M
3300006854\|Ga0075425_101528171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300007076\|Ga0075435_100473984	Not Available	1081	Open in IMG/M
3300007076\|Ga0075435_100654761	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009012\|Ga0066710_104425764	Not Available	525	Open in IMG/M
3300009137\|Ga0066709_102534333	Not Available	690	Open in IMG/M
3300009137\|Ga0066709_102762656	Not Available	653	Open in IMG/M
3300009137\|Ga0066709_103704595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010048\|Ga0126373_10269163	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300010048\|Ga0126373_10561092	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010301\|Ga0134070_10061449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1274	Open in IMG/M
3300010323\|Ga0134086_10030621	All Organisms → cellular organisms → Bacteria → Acidobacteria	1770	Open in IMG/M
3300010329\|Ga0134111_10003351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4850	Open in IMG/M
3300010358\|Ga0126370_10798766	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300010366\|Ga0126379_10208202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1888	Open in IMG/M
3300011269\|Ga0137392_11612225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012096\|Ga0137389_11043264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300012189\|Ga0137388_10452402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300012189\|Ga0137388_10570905	All Organisms → cellular organisms → Bacteria → Acidobacteria	1051	Open in IMG/M
3300012198\|Ga0137364_10408625	Not Available	1016	Open in IMG/M
3300012199\|Ga0137383_10060122	All Organisms → cellular organisms → Bacteria → Acidobacteria	2727	Open in IMG/M
3300012199\|Ga0137383_10274930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300012199\|Ga0137383_10415605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300012202\|Ga0137363_11127606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300012207\|Ga0137381_10169478	Not Available	1885	Open in IMG/M
3300012207\|Ga0137381_11701528	Not Available	521	Open in IMG/M
3300012208\|Ga0137376_10255673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1519	Open in IMG/M
3300012209\|Ga0137379_10835323	Not Available	826	Open in IMG/M
3300012211\|Ga0137377_10299737	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300012211\|Ga0137377_11874648	Not Available	517	Open in IMG/M
3300012285\|Ga0137370_10984325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012349\|Ga0137387_11329209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012354\|Ga0137366_10306034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300012356\|Ga0137371_10074287	All Organisms → cellular organisms → Bacteria → Acidobacteria	2634	Open in IMG/M
3300012356\|Ga0137371_10200014	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300012356\|Ga0137371_10525840	Not Available	912	Open in IMG/M
3300012356\|Ga0137371_10812593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300012357\|Ga0137384_10653424	Not Available	856	Open in IMG/M
3300012359\|Ga0137385_10457113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300012359\|Ga0137385_10966939	Not Available	703	Open in IMG/M
3300012362\|Ga0137361_10211448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1757	Open in IMG/M
3300012532\|Ga0137373_10505098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300012929\|Ga0137404_10055950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3043	Open in IMG/M
3300012929\|Ga0137404_10267573	Not Available	1472	Open in IMG/M
3300012972\|Ga0134077_10011191	Not Available	2930	Open in IMG/M
3300012972\|Ga0134077_10536922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300015358\|Ga0134089_10022844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2152	Open in IMG/M
3300015358\|Ga0134089_10073509	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300018433\|Ga0066667_10470685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1030	Open in IMG/M
3300018433\|Ga0066667_10649049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300018468\|Ga0066662_11582768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300018482\|Ga0066669_10550568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300025910\|Ga0207684_10222269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1630	Open in IMG/M
3300025922\|Ga0207646_10499163	Not Available	1096	Open in IMG/M
3300025922\|Ga0207646_10832765	Not Available	821	Open in IMG/M
3300025929\|Ga0207664_11375381	Not Available	626	Open in IMG/M
3300025939\|Ga0207665_10654922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300026295\|Ga0209234_1192042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300026297\|Ga0209237_1035935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2644	Open in IMG/M
3300026297\|Ga0209237_1147618	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300026298\|Ga0209236_1063984	All Organisms → cellular organisms → Bacteria → Acidobacteria	1772	Open in IMG/M
3300026298\|Ga0209236_1065827	Not Available	1738	Open in IMG/M
3300026306\|Ga0209468_1000953	All Organisms → cellular organisms → Bacteria → Acidobacteria	13099	Open in IMG/M
3300026306\|Ga0209468_1055697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1335	Open in IMG/M
3300026306\|Ga0209468_1138983	Not Available	667	Open in IMG/M
3300026309\|Ga0209055_1126445	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300026310\|Ga0209239_1006807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6330	Open in IMG/M
3300026314\|Ga0209268_1134397	Not Available	611	Open in IMG/M
3300026324\|Ga0209470_1024684	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300026324\|Ga0209470_1036168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2484	Open in IMG/M
3300026324\|Ga0209470_1125720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1136	Open in IMG/M
3300026325\|Ga0209152_10008215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3689	Open in IMG/M
3300026327\|Ga0209266_1005940	All Organisms → cellular organisms → Bacteria	7306	Open in IMG/M
3300026332\|Ga0209803_1057884	Not Available	1688	Open in IMG/M
3300026333\|Ga0209158_1368666	Not Available	501	Open in IMG/M
3300026524\|Ga0209690_1008664	All Organisms → cellular organisms → Bacteria → Acidobacteria	5545	Open in IMG/M
3300026532\|Ga0209160_1338453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300026538\|Ga0209056_10061890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3268	Open in IMG/M
3300026538\|Ga0209056_10577863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300026542\|Ga0209805_1351966	Not Available	561	Open in IMG/M
3300027882\|Ga0209590_10448603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300031820\|Ga0307473_10337889	Not Available	963	Open in IMG/M
3300032205\|Ga0307472_100316520	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.92%
Host-Associated	Host-Associated	3.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.92%
Plants	Host-Associated → Plants	3.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.08%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	16.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.08%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	45.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_6589460	2032320005	Soil	MSYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR
JGI25385J37094_100215555	3300002558	Grasslands Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
JGI25384J37096_100866053	3300002561	Grasslands Soil	VYGEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR*
JGI25388J43891_10028605	3300002909	Grasslands Soil	MPYQKFRKLFEQRPEPSRWQRITLGSPIKWALAGGLCIIAVLLVR*
JGI25390J43892_100893891	3300002911	Grasslands Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAALLVR*
Ga0066674_100635672	3300005166	Soil	MPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR*
Ga0066677_104284581	3300005171	Soil	EKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR*
Ga0066677_107067081	3300005171	Soil	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0066683_100814733	3300005172	Soil	MPYQEFRKLFEQRPEPSRWQRIRLGSSIKWALAGGLCIIAVLLVR*
Ga0066683_103241072	3300005172	Soil	MPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVR*
Ga0066683_104438181	3300005172	Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0066683_106335142	3300005172	Soil	KMPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0066684_107783381	3300005179	Soil	MPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLM
Ga0066685_106677701	3300005180	Soil	MPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAV
Ga0066685_107795462	3300005180	Soil	YEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVR*
Ga0066678_110295932	3300005181	Soil	MPYEEFRKLFEQRPEPNRWQRIRLGSSIKWALAGGLCVIAVLLMR*
Ga0070711_1011637613	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GKMPYEEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLMR*
Ga0066689_103029111	3300005447	Soil	EKKGKMPYEEFRKLFEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR*
Ga0066689_105652861	3300005447	Soil	FRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0070706_1006766201	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLLR*
Ga0070706_1017945381	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EKKGKMPYEEFRKLFEQRPEPNRWQRIRLGSSIKWALAGGLCVIAVLLMR*
Ga0070707_1017778542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0070698_1006619563	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EFRKLFEQRPEPSRWQRITLGSSIKWALVGGLCVIAVLLMR*
Ga0070697_1002665462	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPYEEFRKLFEQRPEPSRWQRITLGSSIKWALVGGLCVIAVLLMR*
Ga0070697_1002712241	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EFRKLFEQRPEPSRWQRITLGNSMKWALAGGLCIIAVLLVR*
Ga0070697_1005118561	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPYEEFRKLFEQRPEPGRWQRIRLGSATKWALAGGLCVVVVLLVVR*
Ga0070697_1006037691	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	QKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0070697_1006300422	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPYEEFRKLFEQCPEPSRWQRIRLGSAMKWALAGGLCVIAVLLVR*
Ga0070697_1011114462	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWAMAIAVLLRGEAEPIP*
Ga0066697_100643491	3300005540	Soil	MGRIRKMPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0066701_106203112	3300005552	Soil	LFEQRPEPSRWQRIRLGSSIKWALAGGLCIIAVLLVR*
Ga0066661_102170122	3300005554	Soil	MPYEEFRKLFEQRPEIRPRFWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0066692_101194271	3300005555	Soil	MPYEEFRKLFEQRPEPGRWQRITLGSSIKWALAGGLCIIAVLL
Ga0066692_105530642	3300005555	Soil	MGESEKMPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0066698_101490252	3300005558	Soil	MPYEEFRKLFEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR*
Ga0066700_110427501	3300005559	Soil	MPYQEFRKLFEQRAEPGRWQRIRLGSSTKWALAGLLCVVACS*
Ga0066703_103887933	3300005568	Soil	MPYEEFRKLFEQRPEPNRWQRIKLGSSIKWALAGGLCVIAVLLMR*
Ga0066705_100332863	3300005569	Soil	MPYQELRKLFEQRPEPSRWQRIRLGSSIKWALAGGLCVIAVLLVR*
Ga0066705_106615412	3300005569	Soil	MPYQKFRQLFEQRPPEPSRWQRITLGSSIKWALAGGLCVIAVLLAR*
Ga0066694_102110252	3300005574	Soil	MPYEEFRKLFKQRPEPNRWQRIRLGSSIKWALAGGLCVIAVLLMR*
Ga0070717_100194798	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0070717_101479472	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQEFRKLFEQRPEPSRWQRIRLGSSIKWALAVGLCVIAVLLVR*
Ga0070717_102377542	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPYEEFRKLFQQRPKPNRWQRIILGSSIKWAVVGGLCIIAVLLVVR*
Ga0070717_111326042	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPYREFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLAAR*
Ga0066696_101515903	3300006032	Soil	MPYQELRKLFEQRPEPSRWQRIRLGSSIKWALAGGLCVIAVL
Ga0066696_109252261	3300006032	Soil	EFRKLFEQRPEPSRWQRIRLGSSIKWALAGGLCIIAVLLVR*
Ga0079221_101747312	3300006804	Agricultural Soil	MPYEEFRKLFEQRPEPGRWQRIRLGSAVKWTLAGGLCVVAVLLVR*
Ga0075433_113353053	3300006852	Populus Rhizosphere	EKKGKMPYEEFRKLFEQHPEPSRWQRIRLGSSIKWALAGGLCVIAALLTR*
Ga0075425_1015281712	3300006854	Populus Rhizosphere	MPYEEFRKLFEQRPEPSRWQRITLGSAIRWALAGGLCVIGLLMR*
Ga0075435_1004739842	3300007076	Populus Rhizosphere	MPYEEFRKLFEQHPEPSRWQRIRLGSSIKWALAGGLCVIAVLLMR*
Ga0075435_1006547611	3300007076	Populus Rhizosphere	FRKLFEQRPEPSRWQRITLGSSIKWAVAGGVCVIAVLLVR*
Ga0066710_1044257641	3300009012	Grasslands Soil	MGESEKMPYQEFRKLFEQRPEPSRWQRITLGSPIKWALAGGLCIIAVLLVR
Ga0066709_1025343332	3300009137	Grasslands Soil	GEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR*
Ga0066709_1027626562	3300009137	Grasslands Soil	PYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVR*
Ga0066709_1037045951	3300009137	Grasslands Soil	MPYQEFRKLFEQRPEPGRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0126373_102691632	3300010048	Tropical Forest Soil	MPYEEFRKLFENRPEPNRWQRIALGNSIKWALAGLLCVIAVLLVR*
Ga0126373_105610923	3300010048	Tropical Forest Soil	FENRPEPKRWQRIQLGNSIKWALAGLLCIIAVLLVR*
Ga0134070_100614494	3300010301	Grasslands Soil	QEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0134086_100306215	3300010323	Grasslands Soil	QKFRKLFEQRPEPSRWQRITLGSPIKWALAGGLCIIAVLLVR*
Ga0134111_100033518	3300010329	Grasslands Soil	PYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCLIAVLLVR*
Ga0126370_107987661	3300010358	Tropical Forest Soil	MPYEEFRKLFENRPEPNRWHRIALGNSIKWALAGLLCVIAVLLAR*
Ga0126379_102082022	3300010366	Tropical Forest Soil	MPYEEFRKLFENRPEPKRWQRIQLGNSIKWALAGLLCIIAVLLVR*
Ga0137392_116122251	3300011269	Vadose Zone Soil	MGESEKMPYQEFRKLFEQRPKPSRWQRTTLGSSIKWALAGGLCVIALLLVR*
Ga0137389_110432641	3300012096	Vadose Zone Soil	MGESEKMPYQEFRKLFEQRPKPSRWQRTTLGSSIKWALAGGLCVIAVLLAR*
Ga0137388_104524022	3300012189	Vadose Zone Soil	MGESEKMPYQEFRKLFDQRPKPSRWQRTTLGSSIKWALAGGLCVIALLLVR*
Ga0137388_105709052	3300012189	Vadose Zone Soil	MPYQEFRKLFEQRPEPGRWQRITLGSSIKWALAGGLCVIAVLLAR*
Ga0137364_104086251	3300012198	Vadose Zone Soil	KMPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0137383_100601226	3300012199	Vadose Zone Soil	FRKLFEQRPEPSRWQRIRLGSSIKWALAGGLCIIAVLLVR*
Ga0137383_102749301	3300012199	Vadose Zone Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGL
Ga0137383_104156052	3300012199	Vadose Zone Soil	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIA
Ga0137363_111276062	3300012202	Vadose Zone Soil	KKAKMPYEEFRKLFEQRPEPNRWQRISLGSSIKWALAGGLCVIAALLMR*
Ga0137381_101694781	3300012207	Vadose Zone Soil	EKMPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0137381_117015281	3300012207	Vadose Zone Soil	KKGKMPYEEFRKLFEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR*
Ga0137376_102556731	3300012208	Vadose Zone Soil	QRPEPNRWQKIRLGSSIKWALSGGLCVIAVLLMR*
Ga0137379_108353232	3300012209	Vadose Zone Soil	VRKNAQEFRKLFEQRPEPSRWQRITLGSPIKWALAGGLCIIAVLLVR*
Ga0137377_102997372	3300012211	Vadose Zone Soil	MPYEEFRKLFEQRPEPGRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0137377_118746482	3300012211	Vadose Zone Soil	VYGEKKGKMPYEEFRKLFEQRPEPNRWQTIRLGSSIKWALAGGLCVIAVLLMR*
Ga0137370_109843252	3300012285	Vadose Zone Soil	RKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0137387_113292091	3300012349	Vadose Zone Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIA
Ga0137366_103060341	3300012354	Vadose Zone Soil	QRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR*
Ga0137371_100742871	3300012356	Vadose Zone Soil	KFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0137371_102000144	3300012356	Vadose Zone Soil	VRYGEKKGKMPYEEFRKLFKQRPEPNRWQRIRLGSSIKWALAGGLCVIAVLLMR*
Ga0137371_105258401	3300012356	Vadose Zone Soil	KFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLARGSALL*
Ga0137371_108125931	3300012356	Vadose Zone Soil	MPYQEFRKLFEQRPEPSRWQRITLGISIKWALAGGLCVIAMLLVR*
Ga0137384_106534241	3300012357	Vadose Zone Soil	KLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0137385_104571133	3300012359	Vadose Zone Soil	PYQKFRKLFEQRPEPSRWQRITPGSSIKWVLAGGLCIIAVLLAR*
Ga0137385_109669393	3300012359	Vadose Zone Soil	YGEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR*
Ga0137361_102114484	3300012362	Vadose Zone Soil	VYGEKKGKMPYEEFRKLFEQRPEPNRWQRIRLGSSIKWALAGGLCVIAVLLVR*
Ga0137373_105050983	3300012532	Vadose Zone Soil	MGESEKMPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0137404_100559503	3300012929	Vadose Zone Soil	MPYQKFRRLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR*
Ga0137404_102675734	3300012929	Vadose Zone Soil	PYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0134077_100111911	3300012972	Grasslands Soil	PYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR*
Ga0134077_105369221	3300012972	Grasslands Soil	IRKMPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLAR*
Ga0134089_100228446	3300015358	Grasslands Soil	VYGEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVR*
Ga0134089_100735093	3300015358	Grasslands Soil	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAV
Ga0066667_104706852	3300018433	Grasslands Soil	MPYQKFRQLFEQRPPEPSRWQRITLGSSIKWALAGGLCVI
Ga0066667_106490493	3300018433	Grasslands Soil	PYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVR
Ga0066662_115827681	3300018468	Grasslands Soil	FEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR
Ga0066669_105505681	3300018482	Grasslands Soil	LVYGEKKGKMPYEEFRKLFEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR
Ga0207684_102222694	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQKFRKLFEQRPEPSRWHRITLGSSIKWALAGGLCIIAMLLVR
Ga0207646_104991633	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPYEEFRKLFEQRPEIRPRFWQRIRACSTAKWVLAGALCVVAVLLMR
Ga0207646_108327651	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	KFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLVR
Ga0207664_113753811	3300025929	Agricultural Soil	FSIARPDSCIQGEQEKMPYQKFRKLFEQRPEPNRWQRIRLGSSIKWALASGLCVIAVLLM
Ga0207665_106549222	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLMMR
Ga0209234_11920422	3300026295	Grasslands Soil	KMPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR
Ga0209237_10359353	3300026297	Grasslands Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR
Ga0209237_11476181	3300026297	Grasslands Soil	MPYEEFRKLFEQRPEPGRWQRITLGSSIKWALAGGLCIIAVLLAR
Ga0209236_10639841	3300026298	Grasslands Soil	KLFEQRPEPSRWQRITLGSPIKWALAGGVCIIAVLLVR
Ga0209236_10658273	3300026298	Grasslands Soil	MPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR
Ga0209468_100095316	3300026306	Soil	MPYQKFRKLFEQRPEPSRWQRITLGSPIKWALAGGLCIIAVLLVR
Ga0209468_10556971	3300026306	Soil	YEEFRKLFEQRPEIRPRFWQRITLGSSIKWALAGGLCVIAVLLVR
Ga0209468_11389832	3300026306	Soil	VYGEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVR
Ga0209055_11264454	3300026309	Soil	KLFEQRPEPNRWQRIRLGSSIKWALAGGLCVIAVLLMR
Ga0209239_10068072	3300026310	Grasslands Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAALLVR
Ga0209268_11343971	3300026314	Soil	GKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR
Ga0209470_10246843	3300026324	Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCLIAVLLVR
Ga0209470_10361682	3300026324	Soil	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLLAR
Ga0209470_11257201	3300026324	Soil	KLFEQRPEPSRWQRITLGSPIKWALAGGLCIIAVLLVR
Ga0209152_100082151	3300026325	Soil	MPYQKFRRLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAVLL
Ga0209266_10059409	3300026327	Soil	KMPYEEFRKLFEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR
Ga0209803_10578842	3300026332	Soil	VYGEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR
Ga0209158_13686661	3300026333	Soil	LVYGEKKGKMPYEEFRKLFEQRPEPNRWQKIRLGSSIKWALAGGLCVIAVLLMR
Ga0209690_10086641	3300026524	Soil	MPYQEFRKLFEQRPEPSRWQRIRLGSSIKWALAGGLCIIAVLLVR
Ga0209160_13384532	3300026532	Soil	MPYQEFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCIIAV
Ga0209056_100618905	3300026538	Soil	MPYQKFRKLFEQRPEPSRWQRITLGSSIKWALAGGLCVIAVLLVR
Ga0209056_105778631	3300026538	Soil	KFRQLFEQRPPEPSRWQRITLGSSIKWALAGGLCVIAVLLAR
Ga0209805_13519661	3300026542	Soil	YEEFRKLFEQRPEPNRWQRIRLGSSIKWAPAGGLCVIAVLLMR
Ga0209590_104486032	3300027882	Vadose Zone Soil	FRLFEQRPEPSRWQRIRLGSSIKWALAGGLCIIAVLLVR
Ga0307473_103378891	3300031820	Hardwood Forest Soil	DSCVRKEKMPYQEFRNLFEQRPEPGRWQRIRLGSATKWALAGGLCVIAVLLVVR
Ga0307472_1003165202	3300032205	Hardwood Forest Soil	MPYQKFRKLFEQRPEPSRWQRITPGSSIKWALAGGLCIIAVLLAVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences