Metagenome / Metatranscriptome Family F062560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062560
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	73 residues
Representative Sequence	QTLEEVFPLHGLGPGGSGFPPTTTIATQLTAQQQADLLVFLKSIDGTTPHFRSEGDDFRDAVRAQGTCPMPPPS
Number of Associated Samples	101
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.62 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	89.23 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (37.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.35% β-sheet: 0.00% Coil/Unstructured: 67.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00155	Aminotran_1_2	8.46
PF03100	CcmE	6.15
PF03150	CCP_MauG	2.31
PF07589	PEP-CTERM	2.31
PF13449	Phytase-like	2.31
PF03928	HbpS-like	1.54
PF01425	Amidase	0.77
PF00903	Glyoxalase	0.77
PF00480	ROK	0.77
PF12973	Cupin_7	0.77
PF08447	PAS_3	0.77
PF01028	Topoisom_I	0.77
PF13847	Methyltransf_31	0.77
PF01551	Peptidase_M23	0.77
PF14525	AraC_binding_2	0.77
PF13340	DUF4096	0.77
PF13531	SBP_bac_11	0.77
PF00072	Response_reg	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	6.15
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	2.31
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.54
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.77
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.62 %
Unclassified	root	N/A	5.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.62 %
Unclassified	root	N/A	5.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.85 %
Unclassified	root	N/A	5.38 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.54 %
Unclassified	root	N/A	5.38 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	4.62 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	3.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.46 %
Unclassified	root	N/A	5.38 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4.62 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	3.85 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.69 %
Unclassified	root	N/A	5.38 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4.62 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.54 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.69 %
Unclassified	root	N/A	5.38 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	4.62 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.85 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.77 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.77 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.77 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.69 %
Unclassified	root	N/A	5.38 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.62 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.77 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	0.77 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	0.77 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.69 %
Unclassified	root	N/A	5.38 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.62 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.85 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.77 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.77 %
unclassified Roseobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.69 %
Unclassified	root	N/A	5.38 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.62 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.85 %
Roseobacter sp. H9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. H9	0.77 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.77 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.69 %
Unclassified	root	N/A	5.38 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.62 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.85 %
Nostoc sp. C057	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. C057	0.77 %
Roseobacter sp. H9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. H9	0.77 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.77 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02J36I8	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
2162886011\|MRS1b_contig_3992264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300004480\|Ga0062592_101783031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005093\|Ga0062594_101915771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005332\|Ga0066388_100272678	All Organisms → cellular organisms → Archaea	2334	Open in IMG/M
3300005332\|Ga0066388_108006683	Not Available	528	Open in IMG/M
3300005338\|Ga0068868_102044961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005436\|Ga0070713_100832612	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005445\|Ga0070708_101079632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300005526\|Ga0073909_10313235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300005713\|Ga0066905_100182224	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300005764\|Ga0066903_103125168	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005764\|Ga0066903_108038466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006028\|Ga0070717_12010282	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006049\|Ga0075417_10221321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	901	Open in IMG/M
3300006049\|Ga0075417_10679590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300006804\|Ga0079221_10612596	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300006844\|Ga0075428_100315779	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1679	Open in IMG/M
3300006844\|Ga0075428_100872111	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300006844\|Ga0075428_102214351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300006845\|Ga0075421_100100642	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300006847\|Ga0075431_100283215	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300006847\|Ga0075431_100619649	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300006847\|Ga0075431_101902438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300009100\|Ga0075418_12470665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300009147\|Ga0114129_11675817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300009156\|Ga0111538_11797407	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300009162\|Ga0075423_10724301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300009162\|Ga0075423_12292229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300009553\|Ga0105249_11396550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300009792\|Ga0126374_11299203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300009822\|Ga0105066_1031310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300010046\|Ga0126384_10798703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. C057	844	Open in IMG/M
3300010046\|Ga0126384_12451068	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300010048\|Ga0126373_11792354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300010358\|Ga0126370_10038720	Not Available	2942	Open in IMG/M
3300010359\|Ga0126376_10743534	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300010360\|Ga0126372_10263762	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300010361\|Ga0126378_12175951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300010362\|Ga0126377_11931566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300010366\|Ga0126379_10061028	All Organisms → cellular organisms → Bacteria	3162	Open in IMG/M
3300010366\|Ga0126379_10088442	All Organisms → cellular organisms → Bacteria	2712	Open in IMG/M
3300010366\|Ga0126379_10259731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1717	Open in IMG/M
3300010376\|Ga0126381_103447685	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010398\|Ga0126383_12393535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012189\|Ga0137388_10189174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300012199\|Ga0137383_11053348	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012362\|Ga0137361_10671967	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	947	Open in IMG/M
3300012363\|Ga0137390_10580204	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1090	Open in IMG/M
3300012469\|Ga0150984_107777623	Not Available	1339	Open in IMG/M
3300012918\|Ga0137396_10838929	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	675	Open in IMG/M
3300012929\|Ga0137404_11572769	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012930\|Ga0137407_10920145	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	827	Open in IMG/M
3300012930\|Ga0137407_11221273	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012948\|Ga0126375_11171740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012951\|Ga0164300_10016391	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300012961\|Ga0164302_11587359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012961\|Ga0164302_11613306	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300012971\|Ga0126369_10139441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2263	Open in IMG/M
3300015264\|Ga0137403_10043762	All Organisms → cellular organisms → Bacteria	4650	Open in IMG/M
3300015371\|Ga0132258_11444645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1737	Open in IMG/M
3300015373\|Ga0132257_100895288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300015374\|Ga0132255_101246654	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300016319\|Ga0182033_10032891	All Organisms → cellular organisms → Bacteria	3336	Open in IMG/M
3300016319\|Ga0182033_11886928	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300016357\|Ga0182032_10038726	All Organisms → cellular organisms → Bacteria	2994	Open in IMG/M
3300016387\|Ga0182040_11951601	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300016422\|Ga0182039_10644106	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300016422\|Ga0182039_10652078	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300016422\|Ga0182039_10838478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300016422\|Ga0182039_12271240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	501	Open in IMG/M
3300018052\|Ga0184638_1268981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300019360\|Ga0187894_10448400	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300020579\|Ga0210407_10249117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1384	Open in IMG/M
3300020581\|Ga0210399_10349513	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300021088\|Ga0210404_10762904	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300022756\|Ga0222622_11081439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300025315\|Ga0207697_10256656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300025906\|Ga0207699_10637284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300025928\|Ga0207700_10802708	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300025933\|Ga0207706_10713060	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300025961\|Ga0207712_11546616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300027821\|Ga0209811_10207539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300027909\|Ga0209382_11690216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300030785\|Ga0102757_11283137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300031561\|Ga0318528_10713940	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031564\|Ga0318573_10107186	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300031668\|Ga0318542_10481870	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031719\|Ga0306917_10032934	All Organisms → cellular organisms → Bacteria	3348	Open in IMG/M
3300031744\|Ga0306918_11116703	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031747\|Ga0318502_10520944	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300031747\|Ga0318502_10960006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300031753\|Ga0307477_10829255	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031768\|Ga0318509_10709838	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031768\|Ga0318509_10852858	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031770\|Ga0318521_10310376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	930	Open in IMG/M
3300031771\|Ga0318546_10309832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300031781\|Ga0318547_10133188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1450	Open in IMG/M
3300031781\|Ga0318547_10413975	Not Available	828	Open in IMG/M
3300031781\|Ga0318547_10577941	Not Available	696	Open in IMG/M
3300031799\|Ga0318565_10177014	Not Available	1037	Open in IMG/M
3300031819\|Ga0318568_10845524	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031820\|Ga0307473_10270384	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300031890\|Ga0306925_10506912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300031890\|Ga0306925_12235718	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031910\|Ga0306923_10334803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1727	Open in IMG/M
3300031912\|Ga0306921_11923292	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300031945\|Ga0310913_10049976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2726	Open in IMG/M
3300031945\|Ga0310913_10808726	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031946\|Ga0310910_10030719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3649	Open in IMG/M
3300031946\|Ga0310910_11138259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. H9	607	Open in IMG/M
3300031947\|Ga0310909_10436302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1099	Open in IMG/M
3300031947\|Ga0310909_10992605	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300031947\|Ga0310909_11164911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300031947\|Ga0310909_11298886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031947\|Ga0310909_11563746	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300031954\|Ga0306926_11656616	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031959\|Ga0318530_10127158	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300032042\|Ga0318545_10036116	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300032059\|Ga0318533_10099194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2013	Open in IMG/M
3300032065\|Ga0318513_10152842	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300032068\|Ga0318553_10666041	Not Available	544	Open in IMG/M
3300032076\|Ga0306924_10322027	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300032089\|Ga0318525_10700317	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300032261\|Ga0306920_102216168	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300032261\|Ga0306920_104178114	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300033289\|Ga0310914_11237992	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300033290\|Ga0318519_10669535	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300034176\|Ga0364931_0215101	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300034663\|Ga0314784_152602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.77%
Host-Associated	Host-Associated	19.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.23%
Plants	Host-Associated → Plants	19.23%
Aquatic	Environmental → Aquatic	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.62%
Sediment	Environmental → Aquatic → Sediment	1.54%
Cave	Environmental → Terrestrial → Cave	0.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.54%
Sand	Environmental → Terrestrial → Soil → Sand	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.77%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_00536890	2065487018	Soil	HRGQAQTLEEVFPLHGLGPDGQNFPPMTTIANTLSPAQQADLLVFLKSIDGTTPHFRSEGDDFRDALSGSTPPQQAPCPVAPPS
MRS1b_0674.00000780	2162886011	Miscanthus Rhizosphere	LHRGQAQTLEEVFPLHGLGPNGEEFPPKTTIQTELTAAQRAYLLVFLKSIDGTSPHFRSEGDVFRDTVRLQGTCPPPPAMMSVTR
Ga0062592_1017830312	3300004480	Soil	EQVFPLHGFGPGGSSFPPTTTIQTELGDRQRADLLVFLKSIDGTTTHVRSEGDEFRDFVRQQGTCPPLVMPLITVMP*
Ga0062594_1019157712	3300005093	Soil	AQSLQAVFPLHGLGPNGQEFPPTSTIQTELTAVQQADLLAFLKSIDSTTEHFRSEGDEFRDFVRLQGTCPAPSPSPLLDSRDLRSLPNDRPPRR*
Ga0066388_1002726784	3300005332	Tropical Forest Soil	LHGLGPNGQNFPPTTTIQTQLNAQQRADLLVFLKSIDGTTDHFRSEGDEFRDSVRLQGTCPPPGP*
Ga0066388_1080066832	3300005332	Tropical Forest Soil	LHGLGPNGQNFPPTTTIQTQLNAQQRADLLVFLKSIDGTTDHFRSEGDDFRDSVRLQGTCPPPGP*
Ga0068868_1020449612	3300005338	Miscanthus Rhizosphere	GQAQTLEEVFPLHGLGPNGEEFPPKTTIQTELTAAQRADLLVFLKSIDGTSPHFRSEGDVFRDTVRLQGTCPPPPAMMSVTR*
Ga0070713_1008326122	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AARVGPNGEVFQPTDTIQSVLSGQERADLLVFLKSIDGTTVPFRSEGDDFRDALRLQSTCPVP*
Ga0070708_1010796322	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FPLHGLGPDGQTFPPTTTIANTLTAAQQADLLVFLKSIDGTTPPFRSEGDDFRDTIRLQGPCP*
Ga0073909_103132352	3300005526	Surface Soil	HGLGPDGQEFPPTTTIQTQLTAAQRADLLAFLQSIDGTTNHLRSEGDVFRDTVRMQGTCPMPPPQPMASTTP*
Ga0066905_1001822241	3300005713	Tropical Forest Soil	FPPTTTIQTELNPMDRANLLAFLKSIDGTTASLRSEGDEFRDFVRLQGTCPPPAAMTTMVSSHGLRPSSQ*
Ga0066903_1031251682	3300005764	Tropical Forest Soil	QTLEEVFPLHGLSPDGENFPPMTTIASTLTPDQQADLLVFLKSIDGTTPPFRSEGDNFRDALRLQGTCPVAPVM*
Ga0066903_1080384661	3300005764	Tropical Forest Soil	GPDGADFPPKTTIQTQLTPDQRADLLVFLKSIDGATTRFRSEADDFRDSIRMQGTCPPPNANPMPYVWQR*
Ga0070717_120102822	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YLHRGQAQTLEEVFPLHGLGPQGTLFPPLTTIATTLSGAQQSDLLVFLKAIDGTTPPFRSEGDDFRDTIRLQGPCP*
Ga0075417_102213211	3300006049	Populus Rhizosphere	LHGLGPGRSGFPPTTTIQTQLTDQERGDLLVFLRSIDGTTPHFRSEGDDFRDALRLQGQCPPP*
Ga0075417_106795902	3300006049	Populus Rhizosphere	VFPLHGLGPNGQEFPPTTTIQTQLNAQQRADLLVFLKSIDGTTDKFRSEGDEFRDFVRQQGTCPPAP*
Ga0079221_106125962	3300006804	Agricultural Soil	LEQVFPLHGLGPQGAVFPPTTTIANTLTAAQQSDLLVFLKAIDGTTPPFRSEGDDFRNAIRLLGPCP*
Ga0075428_1003157791	3300006844	Populus Rhizosphere	QAQTLEEVFPLHGLGPDGQEFPPTTTIQTQLTAQQRADLLVFLKSIDATTPRFRSEGDEFRDFVRLQGTCPPPAPMMSSQ*
Ga0075428_1008721111	3300006844	Populus Rhizosphere	YLHRGQAQILEEVFPLHGLGPNRSGFPPKTTIQTQLTAAQRADLVVFLKSIDGTTPHFRSEGDDFRDALRLQGTCPALAP*
Ga0075428_1022143511	3300006844	Populus Rhizosphere	DVFPLHGLGPSASGFPPATTIQTQLSAADRADLLVFLKSIDGTTPHFRSEADDFRDALRTVGGSCPTP*
Ga0075421_1001006426	3300006845	Populus Rhizosphere	TLEQVFPLHGFGPGGSVFPPTTTIQTELSDRQRSDLLVFLKSIDGTTTHVRSEGDEFRDFVRQQGTCPPLVMPLITVMP*
Ga0075431_1002832151	3300006847	Populus Rhizosphere	QAQTLEEVFMLHGLGAGASGFPPTTTIQTELSAIDRANLLTFLKSIDGTTATLRSEGDEFRDFVRQQGTCPPPAAMSTMMSSHGLSSGDQ*
Ga0075431_1006196491	3300006847	Populus Rhizosphere	PDGQEFPPTTTIQTQLTAAQRADLLVFLKSIDGTTAHFRSEGDVFRDNLRLQGTCPLPLPMTAAR*
Ga0075431_1019024381	3300006847	Populus Rhizosphere	PDGQEFPPTTTIQTQLTAAQRADLLVFLKAIDGTTAHFRSEGDAFRDALRTQGTCPPPAPMMSAR*
Ga0075418_124706651	3300009100	Populus Rhizosphere	VFPLHGLGPGGSAFPPTTTIQTQLTALQRADLLTFLKAIDGSTLHFRSEADAFRDALRMQGPCPPAVPPPSITVSLQ*
Ga0114129_116758172	3300009147	Populus Rhizosphere	QAQTLEAVFPLHGLGPGRSGFPPTTTIQTQLTDQERGDLLVFLRSIDGTTPHFRSEGDDFRDALRLQGPCPP*
Ga0111538_117974072	3300009156	Populus Rhizosphere	AQTLEQVFPLHGFGPGGSSFPPTTTIQTELGDRQRADLLVFLKSIDGTTTHVRSEGDEFRDFVRQQGTCPPLVMPLITVMP*
Ga0075423_107243013	3300009162	Populus Rhizosphere	LEQVFPLHGLGPGGSAFPPTTTIQTQLTAAQRANLLVFLKSIDGTTPHIRSEGDVFRDFLRLQGTCLPPPPA*
Ga0075423_122922291	3300009162	Populus Rhizosphere	TLEDVFPLHGLGPDGQEFPPTTTIQTQLTAAQRADLLVFLKSIDGTTAHFRSEGDVFRDTVRMQGTCPMPAPMAPMP*
Ga0105249_113965502	3300009553	Switchgrass Rhizosphere	GLGSGGSGFPPTTTIQTQLTTPQRADLLAFLKSIDGTTAHFRSEGDEFRDFVRLQGTCPTPPPQPMASATP*
Ga0126374_112992032	3300009792	Tropical Forest Soil	VFPLHGLGPDGQEFPPTTTIQTQLTAQQRGDLLVFLKAIDGTTPHFRSEGDVFRDSVRLQGTCPPPPPMMSSQ*
Ga0105066_10313101	3300009822	Groundwater Sand	YLHRGQAQTLEEVFPLHGLGPNGSGFPPMTTIQTQLTAAQRADLLVFLKAIDGTTPHFRSEGDNFRDMVRLQGTCPPPPPMLSSQ*
Ga0126384_107987032	3300010046	Tropical Forest Soil	HGLGPDGMNFPPTTTIQTQLTAAQRADLLVFLKSIDGTTAHFRSEGDDFRDFVRLQGTCPPPVVMP*
Ga0126384_124510681	3300010046	Tropical Forest Soil	EEVFPLHGLGPERSGFPPTTTIQTELTASQRADLLVFLQSIDATTPRFRSEGDDFRDALRLQGTCPPPAPMLILSRWR*
Ga0126373_117923543	3300010048	Tropical Forest Soil	QTLEAVFPLHGLGPQGTGFPPTTTIQTQLTAVQRADLATFLKSIDGTTDHFRSEGDVFRDTVRLQGTCPMP*
Ga0126370_100387206	3300010358	Tropical Forest Soil	HRGQAQTLEQVFPLHGLGPNGQNFPPTTTIQTQLNAQQRADLLVFLKSIDGTTDHFRSEGDDFRDSVRLQGTCPPPGP*
Ga0126376_107435341	3300010359	Tropical Forest Soil	TLEEVFPLHGLGPGQSGFPPTTTIQTQLTAQERSDLLVFLRSIDGTTPHFRSENDDFRDALRLQGTCPAP*
Ga0126372_102637621	3300010360	Tropical Forest Soil	VFPLHGLGPQGALFPPMTTIATTLSGAQQADLLVFLKSIDGATPPFRSEGDDFRDTIRLQGPCP*
Ga0126378_121759513	3300010361	Tropical Forest Soil	HGLGPGGSGFPPTTTIQTELTDQQRADLLVFLKSIDGTTAHFRSEGDDFRDTVRQQGTCPMPPPS*
Ga0126377_119315662	3300010362	Tropical Forest Soil	AQTLEQVFPLHGLGPGGANFPPTTTIQTQLNAQQRADLLVFLKSIDGTSDHFPSEGDTFRDNVRLQGPCPPPVLMP*
Ga0126379_100610281	3300010366	Tropical Forest Soil	VFPLHGLGPNGQNFPPTTTIQTQLNAQQRADLLVFLKSIDGTTDHFRSEGDEFRDSVRLQGPCPPPGP*
Ga0126379_100884421	3300010366	Tropical Forest Soil	HGLGPDGQEFPPTTTIQTQLTAAQRADLLAFLQSIDGTTNHLRSEGDVFRDTVRLQGTCPMPPMP*
Ga0126379_102597313	3300010366	Tropical Forest Soil	HRGQAQTLEEVFPLHGLGPGGSGFPPTTTIQTQLTAQQRGDLLVFLKAIDGTTAHFRSEGDVFRDSVRLQGTCPPPPAMMNATR*
Ga0126381_1034476852	3300010376	Tropical Forest Soil	HRGQAQTLEQVFPLHGLGPQGAIFPPLTTIANVLTAAQQSDLVVFLKSIDGTTPPFRSEGDDFRDTIRLQGPCP*
Ga0126383_123935351	3300010398	Tropical Forest Soil	LEDVFPLHGLGPDGQEFPPTTTIQTQLTAQQREDLLMFLKAIDGTTPHFRSEGDVFRDSVRLQGTCPPPPPMMSSQ*
Ga0137388_101891744	3300012189	Vadose Zone Soil	VFPLHGLGPQGAIFPPVTTIATTLSGSQQSDLLVFLKAIDGTTPPFRSEGDDFRDTIRVQGPCP*
Ga0137383_110533481	3300012199	Vadose Zone Soil	TLEEVFPLHWLGPGGSGIPPATTIQTQLTAAQRADLLVFLKSIDGTSAHIRSAGDDFRDMVRLQGTCPMPPPPMGP*
Ga0137361_106719671	3300012362	Vadose Zone Soil	TLEEVFPLHGLGPNGSGFPPTTTIQTQLTALQRADLLVFLKSIDGTTPHFRSEGDDFRDALRTAGGPCPVP*
Ga0137390_105802043	3300012363	Vadose Zone Soil	VFPLHGLGPNGSGFPPTTTIQTQLTALQRADLLVFLKSIDGTTAHFRSEGDVFRDNLRMQGTCPPLASQ*
Ga0150984_1077776231	3300012469	Avena Fatua Rhizosphere	QVFPLHGLGPQGAVFPPTTTIANTLTAAQQSDLLVFLKAIDGTTPPFRSEGDDFRNAIRLLGPCP*
Ga0137396_108389292	3300012918	Vadose Zone Soil	HGLGPNGSGFPPTTTIQTQLTALQRADLLVFLKSIDGTTAHFRSEGDDFRDALRTVGPCP
Ga0137404_115727691	3300012929	Vadose Zone Soil	LSINSSAPYLHRAQAQTLANVFPLHGLGPQGTLFPPTTTVATTLTGAQQSDLLVFLKAIDGTTAHFRSEGDVFRDSVRLQGTCPPPAPMLSSQ*
Ga0137407_109201451	3300012930	Vadose Zone Soil	LEEVFPLHGLGPGGSGFPPTTTIQTQLTAAQRGDLLVFLKAIDGTTAHIRSEGDIFRDALRLQGTCPPPPPMLSSQ*
Ga0137407_112212732	3300012930	Vadose Zone Soil	HGLGPGGSGFPPTTTIQTQLGPTDRANLLVFLKSIDGTTAHLRSEGDAFRDALRTAGAPCPVP*
Ga0126375_111717401	3300012948	Tropical Forest Soil	TLEDVFPLHGLGPNGSGFPPMTTIQTQLTAAQRADLLVFLKAIDGTTPHFRSEGDDFRDFVRLQGTCPPPAPMMSSQ*
Ga0164300_100163911	3300012951	Soil	EVFPLHGLGPNGEEFPPKTTIQTELTAAQRADLLVFLKSIDGTSPHFRSEGDVFRDTVRLQGTCPPPPAMMSVTR*
Ga0164302_115873591	3300012961	Soil	AQTLEQVFPLHGLGAGGSEFPPTTTIQTQLTAAQRADLLAFLQSIDGTTNHLRSEGDVFRDTVRMQGTCPMPPPQPMASATP*
Ga0164302_116133062	3300012961	Soil	GQAQTLEEVFPLHGLGPNGQVFPPTTTIANTLTAAQQADLLVFLKSIDGTTVPFRSEGDDFRDTIRLDGPCP*
Ga0126369_101394411	3300012971	Tropical Forest Soil	FPLHGLGPDGQEFPPTTTIQTQLTAQQRGDLLVFLKAIDGTTPHFRSEGDVFRDSVRLQGTCPPPPPMMSSQ*
Ga0137403_100437621	3300015264	Vadose Zone Soil	GLGPDGQEFPPTTTIQTQLTAAQRGDLLVFLKAIDGTTAHFRSEGDVFRDSVRLQGTCPPPAPMLSSQ*
Ga0132258_114446451	3300015371	Arabidopsis Rhizosphere	DVFPLHALAGVFSPNSTIQTELTATERADLLRFLKSIDGTTSHFKSAGDMFRDTVRLQGTCPPPLPMP*
Ga0132257_1008952883	3300015373	Arabidopsis Rhizosphere	GSEFPPTTTIQTQLTAAQRADLLAFLQSIDGTTNHLRSEGDVFRDTVRMQGTCPMPPPQPMASATP*
Ga0132255_1012466542	3300015374	Arabidopsis Rhizosphere	LHRGQAQTLADVFPLHGLGPDGQEFPPTTTIQTQLTAAQRADLLAFLQSIDGTTNHLRSEGDVFRDTVRLQGTCPMP*
Ga0182033_100328911	3300016319	Soil	AQTLEDVFPLHGLGPDGQEFPPKTTIQTQLTAAQRGDLLVFLKSIDGTTPHIPSEGDAFRDALRLQGTCPPPPAMMNATR
Ga0182033_118869281	3300016319	Soil	EVFPLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTDHFRSDADDFRDAVRAQGTCPMPPPS
Ga0182032_100387263	3300016357	Soil	RYLHRGQAQTLEEVFPLYGLGPDGVNFPPMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0182040_119516012	3300016387	Soil	LGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0182039_106441061	3300016422	Soil	AETLEEVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSDGDDFRDAIRTIGPCP
Ga0182039_106520781	3300016422	Soil	LEEVFPLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0182039_108384781	3300016422	Soil	TLEDVFRLHGLGPDGQEFPPKTTIQTQLTAAQRGDLLVFLKSIDGTTPHIPSEGDAFRDALRLQGTCPPPPAMMNATR
Ga0182039_122712402	3300016422	Soil	EVFPLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTDHFRSEADDFRDAVRAQGTCPMPPPS
Ga0184638_12689811	3300018052	Groundwater Sediment	HGLGAGASGFPPTTTIQTELNAVDRANLLVFLKSIDGTTNSLRSAGDVFRDALRTQTPPC
Ga0187894_104484001	3300019360	Microbial Mat On Rocks	LHRGQSQTLAAVFALHGLGPNGQLFPPAATIANTLTNQQKSDLLVFLKSIDGTTRPFRSQGDNFRDFLRLQGTCPPTSSKVRPFTARFGMP
Ga0210407_102491171	3300020579	Soil	EVFPLHGLGPQGTGFPPVTTIQTQLTAAQRGDLLTFLRSIDGTTEHFRSAGDDFRDALRTQATPCP
Ga0210399_103495131	3300020581	Soil	LHRGQAQTLEEVFPLHGLGPNGQVFPPTTTIANTLTAAQQADLLVFLKSIDGTTVPFRSEGDDFRDAIRLQGPCP
Ga0210404_107629041	3300021088	Soil	LHGLGPQGAIFPPTTTIATSLTGAQQSDLLVFLKSIDGTTVPFRSEGDDFRDTIRLQGPC
Ga0222622_110814392	3300022756	Groundwater Sediment	EEVFTLHGLGPGGSGFPPTTTIQTQLTAPQRADLLAFLKSIDGTTAHFRSGGDDFRDFVRLQGTCPIPPPQPMASATP
Ga0207697_102566561	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LGPNGEEFPPKTTIQTELTAAQRADLLVFLKSIDGTSPHFRSEGDVFRDTVRLQGTCPPPPPMMSVTR
Ga0207699_106372842	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GQAQTLEEVFPLHGLGPQGAIFPPMTTIATTLSAAQQSDLLVFLKAIDGTTPPFRSEGDDFRDTIRLQGPCP
Ga0207700_108027082	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HGLGPNGEVFQPTDTIQSVLSGQERADLLVFLKSIDGTTVPFRSEGDDFRDALRLQSTCPVP
Ga0207706_107130601	3300025933	Corn Rhizosphere	EEVFPLHGLGPGASGFPPTTTIQTQLTALQRADLLVFLKSIDGTTRHFRSEGDDFRDALRLQGSCP
Ga0207712_115466161	3300025961	Switchgrass Rhizosphere	GAGGSEFPPTTTIQTQLSAPQRADLLTFLKSIDGTTAHFRSEGDEFRDFVRLQGTCPTPPPQPMASATP
Ga0209811_102075391	3300027821	Surface Soil	DVFPLHGLGPDGQEFPPTTTIQTQLTAAQRADLLAFLQSIDGTTNHLRSEGDVFRDTVRMQGTCPMPPPQPMASATP
Ga0209382_116902161	3300027909	Populus Rhizosphere	TLEQVFPLHGFGPGGSVFPPTTTIQTELSDRQRSDLLVFLKSIDGTTTHVRSEGDEFRDFVRQQGTCPPLVMPLITVMP
Ga0102757_112831372	3300030785	Soil	GQAQTLEDVFRLHGLGPDGQEFPPTTTIQTQLTAAQRGDLLEFLKAIDGTTAHFRSEGDIFRDTVRLQGTCPPAQTAPMTSATRSPVFDAFGLGNR
Ga0318528_107139401	3300031561	Soil	APFLHNGKAETLEEVFPRHGLGPQGTTFPPTTTIASTLSPQQQADLLVFLKSIDGTTVPFRSDGDDFRDAIRKIGPCP
Ga0318573_101071864	3300031564	Soil	YLHRGQAQTLQQVFPLHGLGPNGQVFPPKTTIANTLTAQQQSDLLVFLKSIDGTTVPFRSEGDDFRDAIRLQAPCP
Ga0318542_104818702	3300031668	Soil	AQTLDEVFPLHGLGPDGQNFPPMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0306917_100329344	3300031719	Soil	LDEVFPLHGLGPDEQNFPSMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0306918_111167031	3300031744	Soil	AQTLEEVFPLHGLGPGASGFPPRTTIQTQLSAKERADLLVYLKSIDGATAHFRSEADDFRDAVRAQGVCPVPPPS
Ga0318502_105209441	3300031747	Soil	LHGLAPDGELFPPTKTIANTLSAAEQADLIVFLKSIDGTTVPFRSEGDDFRDALRLQGTCPVP
Ga0318502_109600061	3300031747	Soil	AQTLEEVFPLHGLGPGGSGFPPTTTIATQLTAQQQADLLVFLKSIDGTTPHFRSEGDDFRDAVRAQGTCPMPPPS
Ga0307477_108292551	3300031753	Hardwood Forest Soil	LEEVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSEGDDFRDAIRTIGPCP
Ga0318509_107098382	3300031768	Soil	GLGPGRSGFPPTTTIQTQLSAQERADLLVFLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0318509_108528582	3300031768	Soil	QAQTLEEVFPLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0318521_103103762	3300031770	Soil	FPLHGLGPGRSGFPPTTTIQTQLSAQERADLLVFLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0318546_103098322	3300031771	Soil	DEVFPLHGLGPDEQNFPSMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0318547_101331882	3300031781	Soil	LDEVFPLHGLGPDGQNFPSMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0318547_104139752	3300031781	Soil	RRVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSDGDDFRDAIRKIGPCP
Ga0318547_105779411	3300031781	Soil	QTLEEVFPLHGLGPGGSGFPPTTTIATQLTAQQQADLLVFLKSIDGTTPHFRSEGDDFRDAVRAQGTCPMPPPS
Ga0318565_101770141	3300031799	Soil	EVFPLHGLGPQGTDFPPATTIANTLTAKQQSDLLVFLKSIDGTTVPFRSEGDDFRDALRLQGTCPVPAP
Ga0318568_108455241	3300031819	Soil	GLGPDGENFPPMTTIASTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0307473_102703843	3300031820	Hardwood Forest Soil	VPLHGLGPNGSGFPPATTIQTQLTAAERADLLVFLKSIDGTTAHFRSEGDEFRDAVRTVGGSCPTP
Ga0306925_105069122	3300031890	Soil	LLSINFHAPFLHNGKAETLEEVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSEGDDFRDAIRMIVPCP
Ga0306925_122357181	3300031890	Soil	QTLEEVFPLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0306923_103348031	3300031910	Soil	LDEVFPLHGLGPDGQNFPPMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPVM
Ga0306921_119232921	3300031912	Soil	FLHNGKAETLEEVFPRHGLGPQGTTFPPTTTIASTLSPQQQADLLVFLKSIDGTTVPFRSDGDDFRDAIRKIGPCP
Ga0310913_100499761	3300031945	Soil	PLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0310913_108087261	3300031945	Soil	PLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTDHFRSEADDFRDAVRAQGTCPMPPPS
Ga0310910_100307196	3300031946	Soil	FLHNGKAETLEEVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSEGDDFRDAIRMIGPCP
Ga0310910_111382592	3300031946	Soil	QAQTLEEVFPLHGLGPDGELFPPTKTIANTLSAAEQADLIVFLKSIDGTTVPFRSEGDDFRDALRLQGTCPVP
Ga0310909_104363021	3300031947	Soil	LHGLGPGGSGFPPTTTIATQLTAQQQADLLVFLKSIDGTTPHFRSEGDDFRDAVRAQGTCPMPPPS
Ga0310909_109926052	3300031947	Soil	LHGLGPGRSGFPPTTTIQTQLSAQERADLLVFLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0310909_111649111	3300031947	Soil	HGLGPGGSGFPPTTTIATQLTARQQADLLVFLKSIDGTTPHFRSEGDDFRDAVRAQGTCPMPPPS
Ga0310909_112988861	3300031947	Soil	GPDGQEFPPKTTIQTQLTAAQRGDLLVFLKSIDGTTPHIPSEGDAFRDALRLQGTCPPPPAMMNATR
Ga0310909_115637462	3300031947	Soil	QTLEEVFPLHGLGPQGAIFPPMTTIANTLTAKQQSDLLVFLKSIDGTTVPFRSEGDDFRDALRLQGTCPVPGP
Ga0306926_116566161	3300031954	Soil	AQTLDEVFPLHGLGPDGQNFPPMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALGLQGTCPVAPVM
Ga0318530_101271584	3300031959	Soil	GLGPNGQVFPPKTTIANTLTAQQQSDLLVFLKSIDGTTVPFRSEGDDFRDAIRLQAPCP
Ga0318545_100361161	3300032042	Soil	LLSINFHAPFLHNGKAETLEEVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSEGDDFRDAIRMIGPCP
Ga0318533_100991941	3300032059	Soil	PFLHRGQAQTLEEVFPLHGLGSGPDATNFPPTTTIATVLSAQQQADLLVFLKSIDGTTVPFPSDGDAFRDAIRTVGPCP
Ga0318513_101528421	3300032065	Soil	NFHAPFLHNGKAETLEEVFPLHGLGPQGTTFPPTTTIANTLTLQQQADLLVFLKSIDGTTVPFRSDGDDFRDAIRKIGPCP
Ga0318553_106660412	3300032068	Soil	LEEVFPLHGLGPQGALFPPQTTIFTTLSGAQQADLLVFLKAIDGATPPFRSEGDDFRDTIRLQGPCP
Ga0306924_103220271	3300032076	Soil	TLEEVFPLHGLGPGASGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0318525_107003171	3300032089	Soil	TLEEVFPLHGLGPQGTDFPPATTIANTLTAKQQSDLLVFLKSIDGTTVPFRSEGDDFRDALRLQGTCPVPAP
Ga0306920_1022161682	3300032261	Soil	QAQTLEEVFPLHGLGPGRSGFPPTTTIQTQLSAQERADLLVYLKSIDGTTAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0306920_1041781141	3300032261	Soil	AQTLEEVFPLHGLGPGASGYPPKTTIQTQLSAQERADLLVYLKSIDGATAHFRSEADDFRDAVRAQGTCPMPPPS
Ga0310914_112379921	3300033289	Soil	EAVFPLHGLGPGGSGFPPTTTIATQLTVQQQADLLVFLKSIDGTTPHFRSEGDDFRDAVRAQGTCPMPPPS
Ga0318519_106695352	3300033290	Soil	LDEVFPLHGLGPDEQNFPSMTTIANTLTPDQQADLLVFLKSIDGTTPPFRSEGDDFRDALRLQGTCPVAPV
Ga0364931_0215101_432_626	3300034176	Sediment	LHGLGLNGMLFPPTTTIQTELTALERANLLVFLKSIDGTTNHIRSAGDVFRDTLRLAGAPCPMP
Ga0314784_152602_269_523	3300034663	Soil	LHRGQAQTLEEVFLLHGLGPDGQEFPPMTTIQTQLTAAQRADLLVFLKAIDGTTPHFRSEGDEFRDFVRLQGTCPPPAPMMSSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062560

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences