NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F062546

Metagenome / Metatranscriptome Family F062546

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F062546
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 50 residues
Representative Sequence MANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPDEDAADAWDCGFA
Number of Associated Samples 114
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.09 %
% of genes near scaffold ends (potentially truncated) 98.46 %
% of genes from short scaffolds (< 2000 bps) 92.31 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.385 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(11.539 % of family members)
Environment Ontology (ENVO) Unclassified
(36.923 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(31.538 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.41%    β-sheet: 10.26%    Coil/Unstructured: 83.33%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF04909Amidohydro_2 20.00
PF07883Cupin_2 19.23
PF03972MmgE_PrpD 10.00
PF00501AMP-binding 5.38
PF13247Fer4_11 1.54
PF00037Fer4 1.54
PF00596Aldolase_II 0.77
PF02566OsmC 0.77
PF13193AMP-binding_C 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 10.00
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.77
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.77


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.15 %
UnclassifiedrootN/A3.85 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0684261All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105452692All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105454907All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300000787|JGI11643J11755_11348125All Organisms → cellular organisms → Bacteria → Proteobacteria559Open in IMG/M
3300000789|JGI1027J11758_12324702All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300003324|soilH2_10108316All Organisms → cellular organisms → Bacteria3097Open in IMG/M
3300003993|Ga0055468_10097783All Organisms → cellular organisms → Bacteria → Proteobacteria823Open in IMG/M
3300004019|Ga0055439_10149699All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium725Open in IMG/M
3300004058|Ga0055498_10072811All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium650Open in IMG/M
3300004077|Ga0055523_10214615All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300004463|Ga0063356_101091456All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1149Open in IMG/M
3300004463|Ga0063356_104555801All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300004463|Ga0063356_106269682All Organisms → cellular organisms → Bacteria → Proteobacteria510Open in IMG/M
3300004463|Ga0063356_106294614All Organisms → cellular organisms → Bacteria → Proteobacteria509Open in IMG/M
3300004480|Ga0062592_101318158All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005295|Ga0065707_10916899All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium562Open in IMG/M
3300005332|Ga0066388_105262117All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300005441|Ga0070700_101629506All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300005459|Ga0068867_101351333All Organisms → cellular organisms → Bacteria → Proteobacteria659Open in IMG/M
3300005467|Ga0070706_101792265All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300005546|Ga0070696_100039410All Organisms → cellular organisms → Bacteria3262Open in IMG/M
3300005546|Ga0070696_101822638Not Available526Open in IMG/M
3300005549|Ga0070704_101919495All Organisms → cellular organisms → Bacteria → Proteobacteria549Open in IMG/M
3300005577|Ga0068857_101931962All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005764|Ga0066903_103137508All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300005843|Ga0068860_101930033All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005981|Ga0081538_10359366All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300006049|Ga0075417_10024058All Organisms → cellular organisms → Bacteria2459Open in IMG/M
3300006049|Ga0075417_10629219All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300006806|Ga0079220_11459179All Organisms → cellular organisms → Bacteria → Proteobacteria584Open in IMG/M
3300006844|Ga0075428_100125199All Organisms → cellular organisms → Bacteria2797Open in IMG/M
3300006865|Ga0073934_10449413All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300006881|Ga0068865_101967356All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300006894|Ga0079215_10483077All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium766Open in IMG/M
3300009012|Ga0066710_103107698All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300009078|Ga0105106_10152345All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300009078|Ga0105106_10349197All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300009091|Ga0102851_12418750All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300009098|Ga0105245_11589947All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300009168|Ga0105104_10646814All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300009444|Ga0114945_10141642All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300009678|Ga0105252_10053590All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300009678|Ga0105252_10286985All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium730Open in IMG/M
3300009817|Ga0105062_1005771All Organisms → cellular organisms → Bacteria1806Open in IMG/M
3300010029|Ga0105074_1008492All Organisms → cellular organisms → Bacteria1589Open in IMG/M
3300010029|Ga0105074_1059265Not Available685Open in IMG/M
3300010040|Ga0126308_10945658All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300010045|Ga0126311_11480318All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300010046|Ga0126384_11361613All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300010358|Ga0126370_10189002All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300010361|Ga0126378_10352062All Organisms → cellular organisms → Bacteria1582Open in IMG/M
3300010391|Ga0136847_11083068All Organisms → cellular organisms → Bacteria2272Open in IMG/M
3300010398|Ga0126383_13484335All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010400|Ga0134122_10897098All Organisms → cellular organisms → Bacteria → Proteobacteria857Open in IMG/M
3300010401|Ga0134121_11398510All Organisms → cellular organisms → Bacteria → Proteobacteria710Open in IMG/M
3300011416|Ga0137422_1045964All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1044Open in IMG/M
3300011438|Ga0137451_1204916All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium625Open in IMG/M
3300011443|Ga0137457_1147281All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium780Open in IMG/M
3300012041|Ga0137430_1078546All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300012160|Ga0137349_1021959All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300012163|Ga0137355_1052307All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300012168|Ga0137357_1136460All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300012179|Ga0137334_1094979All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium669Open in IMG/M
3300012203|Ga0137399_11534057All Organisms → cellular organisms → Bacteria → Proteobacteria554Open in IMG/M
3300012205|Ga0137362_11649408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300012232|Ga0137435_1197952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium616Open in IMG/M
3300012349|Ga0137387_10350964All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300012353|Ga0137367_10841320All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012359|Ga0137385_11202851All Organisms → cellular organisms → Bacteria → Proteobacteria619Open in IMG/M
3300012489|Ga0157349_1019173All Organisms → cellular organisms → Bacteria → Proteobacteria632Open in IMG/M
3300012930|Ga0137407_11516951All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300012944|Ga0137410_10974873All Organisms → cellular organisms → Bacteria → Proteobacteria721Open in IMG/M
3300013306|Ga0163162_11930355All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300014326|Ga0157380_12386551All Organisms → cellular organisms → Bacteria → Proteobacteria594Open in IMG/M
3300014501|Ga0182024_12169667All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300014870|Ga0180080_1056529All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium659Open in IMG/M
3300014884|Ga0180104_1051408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1105Open in IMG/M
3300014884|Ga0180104_1091272All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300015245|Ga0137409_10729870All Organisms → cellular organisms → Bacteria → Proteobacteria826Open in IMG/M
3300018051|Ga0184620_10349943All Organisms → cellular organisms → Bacteria → Proteobacteria501Open in IMG/M
3300018054|Ga0184621_10086902All Organisms → cellular organisms → Bacteria → Proteobacteria1093Open in IMG/M
3300018066|Ga0184617_1275272All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300018076|Ga0184609_10218930All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium889Open in IMG/M
3300018077|Ga0184633_10094306All Organisms → cellular organisms → Bacteria → Proteobacteria1544Open in IMG/M
3300018079|Ga0184627_10075982All Organisms → cellular organisms → Bacteria → Proteobacteria1759Open in IMG/M
3300018079|Ga0184627_10353581All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium768Open in IMG/M
3300018082|Ga0184639_10098172All Organisms → cellular organisms → Bacteria → Proteobacteria1547Open in IMG/M
3300018084|Ga0184629_10442828All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium681Open in IMG/M
3300018084|Ga0184629_10485404All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300018422|Ga0190265_10103411All Organisms → cellular organisms → Bacteria2677Open in IMG/M
3300018422|Ga0190265_10912600All Organisms → cellular organisms → Bacteria → Proteobacteria1001Open in IMG/M
3300018429|Ga0190272_12273508All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300018432|Ga0190275_11438553All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300020197|Ga0194128_10259578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium890Open in IMG/M
3300021363|Ga0193699_10280957All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300021445|Ga0182009_10348161All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300022694|Ga0222623_10357022All Organisms → cellular organisms → Bacteria → Proteobacteria558Open in IMG/M
3300025324|Ga0209640_10231965All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300025324|Ga0209640_11078217All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300025550|Ga0210098_1096173All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300025925|Ga0207650_11472524All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300025930|Ga0207701_10111337All Organisms → cellular organisms → Bacteria2447Open in IMG/M
3300025930|Ga0207701_11171078All Organisms → cellular organisms → Bacteria → Proteobacteria635Open in IMG/M
3300025936|Ga0207670_11563641All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300025942|Ga0207689_11556368All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300026052|Ga0208289_1012285All Organisms → cellular organisms → Bacteria → Proteobacteria660Open in IMG/M
3300026053|Ga0208422_1010378All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300026066|Ga0208290_1032335All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300026075|Ga0207708_11332959All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300027561|Ga0209887_1024256All Organisms → cellular organisms → Bacteria1434Open in IMG/M
3300027573|Ga0208454_1104650Not Available661Open in IMG/M
3300027815|Ga0209726_10164942All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300027840|Ga0209683_10492654All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300027843|Ga0209798_10387201All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300027847|Ga0209402_10546019All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300027886|Ga0209486_11303238All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300027979|Ga0209705_10194091All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300028802|Ga0307503_10922381All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300030728|Ga0308136_1020313All Organisms → Viruses → Predicted Viral1499Open in IMG/M
3300031170|Ga0307498_10029023All Organisms → cellular organisms → Bacteria → Proteobacteria1344Open in IMG/M
3300031562|Ga0310886_10342585All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300031943|Ga0310885_10061745All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300031962|Ga0307479_10126745All Organisms → cellular organisms → Bacteria2495Open in IMG/M
3300031962|Ga0307479_11172607All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300032075|Ga0310890_10422847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium995Open in IMG/M
3300032122|Ga0310895_10653974All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300032180|Ga0307471_102104456All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300033434|Ga0316613_10170792All Organisms → cellular organisms → Bacteria1386Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil11.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.62%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.08%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand3.08%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.08%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.31%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.31%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.31%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.31%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.54%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.54%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.54%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.77%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.77%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.77%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.77%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.77%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.77%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.77%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.77%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.77%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.77%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.77%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004077Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011416Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300012160Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2EnvironmentalOpen in IMG/M
3300012163Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2EnvironmentalOpen in IMG/M
3300012168Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2EnvironmentalOpen in IMG/M
3300012179Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300020197Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65mEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025550Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026052Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026053Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026066Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300030728Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_940_32.3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_068426123300000033SoilMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEEECDAWDCGFAARVRAY
INPhiseqgaiiFebDRAFT_10545269223300000364SoilVANPTLKFYFREPTIDTNIPITDGTVKIEGFEWQFV
INPhiseqgaiiFebDRAFT_10545490713300000364SoilVANPTLKFYFREPTIDTNIPITDGTVKIEGFEWQFVKTEDEADAWDCGFAARL
JGI11643J11755_1134812513300000787SoilMANPKLKFYFREPTIDTNIPITDGTVKIEGFDWEFVPDEDAADAWDCGFAARVRAFAK
JGI1027J11758_1232470213300000789SoilVANPTLKFYFREPTIDTNIPITDGTVKIEGFEWQFVKTEDEADAWDCGFAARLR
soilH2_1010831613300003324Sugarcane Root And Bulk SoilMIKTVNAAERKGKNMANAKLKFYFREPTIDTNLPITDGTVTIDGFDWEFVDNEAAADAWDCGFAARVRAFAK
Ga0055468_1009778323300003993Natural And Restored WetlandsMADPKLKFYFREPTIDTNMPITDGTVKIEGFDWEFVTNEDAADAWDCGFAARVRAYA
Ga0055439_1014969913300004019Natural And Restored WetlandsMANPKLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEEQCDAWDCGFAARLRAYAKGEAHISI
Ga0055498_1007281113300004058Natural And Restored WetlandsMANPKLRFYFREPTIDLNIPITDGSVKVEGFDLEFVPNEEQCDAWDCGFAARLVAY
Ga0055523_1021461513300004077Natural And Restored WetlandsMANPKLRFYFREPTIDTNIPITDGTVKIDDFEWEFVPTEEECDAWDC
Ga0063356_10109145623300004463Arabidopsis Thaliana RhizosphereMANPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEDA
Ga0063356_10455580123300004463Arabidopsis Thaliana RhizosphereMASPKLKFFFREPTIDTNIPITDGTVKIEGFDWEFVPNEAAADAWDCGFAARVRA
Ga0063356_10626968223300004463Arabidopsis Thaliana RhizosphereMALPKLKFYFREPTIDTNVPITDGTVKIEGFEWEFVPDEDAADAWDCGF
Ga0063356_10629461423300004463Arabidopsis Thaliana RhizosphereMALPKLKFYFREPTIDTNIPITDGTVKIEGFEWEFVPDEDAADAWDCGF
Ga0062592_10131815813300004480SoilMPNPKLHFYFREPTVDTNMPITDGTIKVEGFDVEIVAREEDADAWDCGFAARVRAYSKGAAQLSI
Ga0065707_1091689923300005295Switchgrass RhizosphereMPNPKLRLYFREPTVDTNMPITDGTVKIEGFEFEIVKREDDADAWDCGFAARVRAHARGLGHVS
Ga0066388_10526211713300005332Tropical Forest SoilMPDPKLRLYFREPTVDTNMPITEESVKIEGLQVEIVKREDDA
Ga0070700_10162950613300005441Corn, Switchgrass And Miscanthus RhizosphereMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDNED
Ga0068867_10135133323300005459Miscanthus RhizosphereMANPKLKFYFREPTIDTNIPITDGTVKIEGFDWEFVPDEDAADAWDCGFAARVRA
Ga0070706_10179226523300005467Corn, Switchgrass And Miscanthus RhizosphereMSNAKLRFYFREPTIDTNIPITDGTVKMKGFDWEFVDNEDDADAWDCG
Ga0070741_1143921323300005529Surface SoilMANPKLRFRFFEPEVDTNLPFTDGTVQIDGFDLECVSG
Ga0070696_10003941043300005546Corn, Switchgrass And Miscanthus RhizosphereMANSKLKFYFREPTIDTNLPITDGSVKIDGFDWEFVDNEAAA
Ga0070696_10182263813300005546Corn, Switchgrass And Miscanthus RhizosphereMANPILRFYFREPTIDLNIPITDGTVKIEGFDWEFVPNEDACDAWDCGFAARL
Ga0070704_10191949513300005549Corn, Switchgrass And Miscanthus RhizosphereMALPKLKFYFREPTIDTNIPITDGTLKIEGFEWEFVPDEDAADAWDCG
Ga0068857_10193196223300005577Corn RhizosphereMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDNEDAADAWDCGFA
Ga0066903_10313750823300005764Tropical Forest SoilMSDPKLLLYFREPTVDTNMPITDGTVKIEGFEVEIVQREDDADVWDCGFAARVRAHAKGLAHVSI
Ga0068860_10193003313300005843Switchgrass RhizosphereMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDNEDAADAWDCGFAARVRAYAQGL
Ga0081538_1035936613300005981Tabebuia Heterophylla RhizosphereMANPKLRFYFREPTIDTNIPITDGTVKIDGFDWELVASEDDADAWDC
Ga0075417_1002405843300006049Populus RhizosphereMSNAKLRFYFREPTIDTNIPITDGTVKMEGFDWGFADNEDDADAWDCGFAARVRAYAKGLPHISI
Ga0075417_1062921923300006049Populus RhizosphereMSNAKLRFYFREPTIDTNIPITDGTIKMEGFDWEFVDNEDDADAWDCGFAARVRAYAKGLPHISI
Ga0079220_1145917923300006806Agricultural SoilMANAKLKFYFREPTIDTNLPITDGSVKIDGFDWEFVD
Ga0075428_10012519913300006844Populus RhizosphereMSNAKLRFYFREPTIDTNIPITDGTIKMEGFDWEFVDNEDDADAWD
Ga0073934_1044941313300006865Hot Spring SedimentMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVANEDDADAWDCGFAA
Ga0068865_10196735623300006881Miscanthus RhizosphereMANPKLKFYFREPTIDTNIPITDGTVKIDGFEWEFVPDENQCDAWDCGFAARVRAYAK
Ga0079215_1048307723300006894Agricultural SoilMANPILRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEDACDAWDCGFAARL
Ga0066710_10310769813300009012Grasslands SoilMADAKLRFYFREPTIDTNIPITYGTIKIEGFDWHFVKNEDEADAWDCGFAARLRAYAE
Ga0105106_1015234523300009078Freshwater SedimentMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPDEDAADAWDCGFA
Ga0105106_1034919713300009078Freshwater SedimentMANPKLRFYFREPTIDTNIPITYGTVTIDGFDWEFVPTE
Ga0102851_1241875013300009091Freshwater WetlandsMANPKLHFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEEECDAWDCGFAARVRAYAKGEQHISI
Ga0105245_1158994723300009098Miscanthus RhizosphereMADPIIRFYFREPTIDTNIPITDGTVRIDGFQWQFVKTED
Ga0105104_1064681413300009168Freshwater SedimentMPNPKLRLYFREPTVDTNMPITDGTVKIEGFEFEIVKREDDADAWDCGFAARV
Ga0114945_1014164213300009444Thermal SpringsMANPKLRFYFREPTIDTNVPITDGTVKIDGFDFEFVDSEDGADAWDCGFAARVRAY
Ga0105252_1005359033300009678SoilMAKPKLHFYFREPTVDTNRAITDGTVKVEGFDLEIVEREEAADAWDCGFAARLRANAQGA
Ga0105252_1028698513300009678SoilMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPIEEACDAWDCG
Ga0105062_100577113300009817Groundwater SandMPNPKLRLYFREPTVDTNMPITDGTVKIEGFGFEIVKREDDADAW
Ga0105074_100849233300010029Groundwater SandMPNPKLRLYFREPTVDTNMPITDGTVKIEGFEFEIVKREDDAD
Ga0105074_105926513300010029Groundwater SandMPSPKLRLYFREPTVDTNMPITDGTVKIEGFEFEIVKREDDAD
Ga0126308_1094565823300010040Serpentine SoilMANPKLRFYFREPTIDTNIPITDGTVTIDGFDWEFVPTEEECDAWDCGFAARVRAYAKGEPHTSI
Ga0126311_1148031813300010045Serpentine SoilMANPKLRFYFREPTIDTNIPITDGTVQIDGFDWEFVPTEDEC
Ga0126384_1136161323300010046Tropical Forest SoilMANPKLRFYFREPTIDTNIAITDGTVKAEGFDFEFVPSED
Ga0126370_1018900223300010358Tropical Forest SoilMAQPKLRFYFREPTIDTNIPITDGTVKIEGFDWQFVASEDQA
Ga0126378_1035206213300010361Tropical Forest SoilMSDPKLRLYFREPTVDTNMPITDGSVKIEGFEVEIVPREDDA
Ga0136847_1108306833300010391Freshwater SedimentMEVAMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEEQCDAWDCGFAAR
Ga0126383_1348433513300010398Tropical Forest SoilMPDPKLRLYFREPTVDTNMPITDGTVKIEGFEVEI
Ga0134122_1089709823300010400Terrestrial SoilMKGDKIMALPKLKFYFREPTIDTNIPITDGTVKIEGFDWEFVPDE
Ga0134121_1139851013300010401Terrestrial SoilMANPRLKFYFREPTIDTNIPITDGSVKIDGFDWEFVPNEEAADAWDCGFAARVRAY
Ga0137422_104596413300011416SoilMANPKLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEEECDAWDCG
Ga0137451_120491613300011438SoilMANPRLRFYFREPTIDLNIPITDGTVKIDGFDWEF
Ga0137457_114728113300011443SoilMANPILRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTED
Ga0137430_107854623300012041SoilMAKPKLHFYFREPTVDTNKAITDGTVQIEGFDLEIVEREEAADA
Ga0137349_102195913300012160SoilMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEEECD
Ga0137355_105230733300012163SoilMSRYVASVTKGTAMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEEECDAWDCGFAARVRAYA
Ga0137357_113646013300012168SoilMANPKLRFYFREPTIDTNIPITDGTIKIEGFEWEFVPREDDADAWDCGFAARLRAHATNE
Ga0137334_109497923300012179SoilMAIPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTE
Ga0137399_1153405713300012203Vadose Zone SoilMANPKLKFYFREPTIDTNIPITDGSVKIDGFDWEFVPN
Ga0137362_1164940813300012205Vadose Zone SoilMLPRGLKGGSKMSNAKLRFYFREPTIDTNIPITDGTVKMEGFDWEFVDNEDDADAWDCGFAARVRAYAK
Ga0137435_119795213300012232SoilMANPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEEACDAWDCGFAARVRAYA
Ga0137387_1035096423300012349Vadose Zone SoilMSNAKLRFYFREPTIDTNIPITDGTVKMEGFDWEFADNEDNADAWDCGFAA
Ga0137367_1084132023300012353Vadose Zone SoilMLLRGLKGGTKMSNAKLRFYFREPTIDTNIPITDGTIKMEGFDWEFVDNEDDADAWDCGFAARVRAYAKG
Ga0137385_1120285113300012359Vadose Zone SoilMANPKLKFYFREPTIDTNIPITDGSVKIDGFDWEFVPDENECDAWDCG
Ga0157349_101917313300012489Unplanted SoilMANPKLKFYFREPTIDTNIPITDGTVKIDGFDWEFVPDENQCDAW
Ga0137407_1151695123300012930Vadose Zone SoilMPNPKLRLYFREPTVDTNMPITDGTVKVEGFELEIVKREDDAD
Ga0137410_1097487323300012944Vadose Zone SoilMANPKLKFYFREPTIDTNIPITDGSVKIDGFEWEFVPDE
Ga0163162_1193035513300013306Switchgrass RhizosphereMKIMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDNEDAADAWDCGFAAR
Ga0157380_1238655123300014326Switchgrass RhizosphereMANPKLIFYFREPTIDTNIPITDGSVKIDGFEWEFVPDENQCDAWDCGFAARVRAYAKEE
Ga0182024_1216966723300014501PermafrostLAVEAAMANPKLRFFFREPTIDTNLPFTDGTISIEGFDLEVATGEW
Ga0180080_105652923300014870SoilMANPKLLFYFREPTIDTNIPITDGTVKIDGFDWEFVPTEEECDAWDCGFAARVR
Ga0180104_105140823300014884SoilMPSAKLRFYFREPTIDTNIPITDGTIKIEGFEWEFVPKEDDADAWDCGFAARLRAHATNEPHIS
Ga0180104_109127223300014884SoilMPSPKLRFYFREPTIDTNIPITDGTIKIEGFEWEFVPKEDDADAWDCGFAARLRAHATNEPHIS
Ga0137409_1072987023300015245Vadose Zone SoilMANPKLKFYFREPTIDTNIPITDGSVKIDGFDWEFVPDENQCDAWDCGFAARV
Ga0184620_1034994313300018051Groundwater SedimentMANPKLKFYFREPTIDTNMPITDGSVKLDGFDWEVVPDESECD
Ga0184621_1008690213300018054Groundwater SedimentMAIPKLKFYFREPTIDTNIPITDGTVQVDGFDWQFV
Ga0184617_127527213300018066Groundwater SedimentMANPILRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEDACDAWDCGFAARLRAYAKGEAHISIP
Ga0184609_1021893023300018076Groundwater SedimentMANPILRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEDA
Ga0184633_1009430613300018077Groundwater SedimentMAIPKLKFYFREPTIDTNIPITDGTVKIDGFDWQFVPNEEEADAWDCGF
Ga0184627_1007598213300018079Groundwater SedimentMPNPKLRFYFREPTIDTNTPITDGTVKIDGFEFEFVDNEDGADGWDCGFA
Ga0184627_1035358123300018079Groundwater SedimentMANAKMRFYFREPTIDLNIPITDGTVKVDGFDLEFVPNEEQCD
Ga0184639_1009817213300018082Groundwater SedimentMAIPKLKFYFREPTIDTNIPITDGTVKIDGFDWQFVPNEEEA
Ga0184629_1044282823300018084Groundwater SedimentMAIPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEEACDAWDCGFAARVRAY
Ga0184629_1048540423300018084Groundwater SedimentMPNPKLRLYFREPTVDTNMPITDGTVKVEGFELEIVKR
Ga0190265_1010341133300018422SoilMSNPKLKFYFREPTIDTNIPITDGTVKIEGFDWEFVPDE
Ga0190265_1091260023300018422SoilMANPKLKFYFREPTIDTNIPITDGTVKIDGFDWEFVSNEDAADAWDCGF
Ga0190272_1227350813300018429SoilMKIMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVENEDAA
Ga0190275_1143855313300018432SoilMANPKLKFYFREPTIDTNIPITDGPVKIEGCEWEFVPTEDAADAWD
Ga0194128_1025957823300020197Freshwater LakeMANARMRFYFREPTIDMNIPITDGTVKVEGFDLEFVPDEGQCDAWDCGFAARLVAYAKGEKHISI
Ga0193699_1028095723300021363SoilMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDN
Ga0182009_1034816113300021445SoilMPNPKLRFYFREPTIDTNSAITDGTVKIDGFDFEFVSTEDQADAWDCGFAARVRAHAMGLPHIS
Ga0222623_1035702213300022694Groundwater SedimentMAIPKLKFYFREPTIDTNIPITDGTVKVDGFDWQFVPNEEEADAWDCGFAARVRAY
Ga0209640_1023196523300025324SoilMAQPKLRFYFREPTIDTNIPITDGTVKIDGFDWEF
Ga0209640_1107821723300025324SoilMANPVMRFRYREPTVDTNRPLTEGTVKVEGFDLQVLPEMTTDD
Ga0210098_109617313300025550Natural And Restored WetlandsMANPKLRFYFREPTIDTNIPITDGTVEIDGFDWEFVPTEEECDAW
Ga0207650_1147252423300025925Switchgrass RhizosphereMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDNEDAADAWDCGFAARVRAYAQGLPHISI
Ga0207701_1011133733300025930Corn, Switchgrass And Miscanthus RhizosphereMANPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEEACDAWDCGFAARLRAYAKGEAHIS
Ga0207701_1117107813300025930Corn, Switchgrass And Miscanthus RhizosphereMANPKLKFYFREPTIDTNIPITDGSVKIDGFDWEFVPNEEAADAWDCGFAARVRAY
Ga0207670_1156364123300025936Switchgrass RhizosphereMANAKLKFYFREPTIDTNLPITDGSVKIDGFDWEFVDNEAAADAWDCGFAARVRAF
Ga0207689_1155636813300025942Miscanthus RhizosphereMANPVLKFYFREPTIDTNMPITDSTVKIDGFDRQFVDNEDAAD
Ga0208289_101228513300026052Natural And Restored WetlandsMATPKLKFYFREPTIDTNIPITDGTVKLDGFDWEFVPNEEECDAWDCGFAAR
Ga0208422_101037813300026053Natural And Restored WetlandsMANPRLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEEACDAWDCGFAAR
Ga0208290_103233523300026066Natural And Restored WetlandsMADPKLKFYFREPTIDTNIPITDGTVKLDGFDWEFVPNEEECDAWDCGFA
Ga0207708_1133295913300026075Corn, Switchgrass And Miscanthus RhizosphereMANPVLKFYFREPTIDTNIPITDSTVKIDGFDWQFVDNEDAADAWDCGFAARVRA
Ga0209887_102425623300027561Groundwater SandMPNPKLRLYFREPTVDTNMPITDGTVKIEGFEFEIVKREDDADAWDCGFAARVRAHAKG
Ga0208454_110465023300027573SoilMAKPKLHFYFREPTVDTNKAITDGTVQIEGFDLEIVEREEAADAWDCGFAARLRARA
Ga0209726_1016494223300027815GroundwaterMANPKLRFYFREPTIDTNIPITDGTVKIDGFDWEFVPTEA
Ga0209683_1049265423300027840Wetland SedimentMANPKLRFYFREPTIDTNIPITDGTVKLDGFDWEFVPSEEECDAWDCGFAAR
Ga0209798_1038720123300027843Wetland SedimentMANPKLRFYFREPTIDTNIPITDGTVKIDGFDWEFVPDEESCDAWDCGF
Ga0209402_1054601923300027847MarineMANPKLRFRFREPTVDTNLPLTDGTVKIDGFDLEVLGG
Ga0209486_1130323823300027886Agricultural SoilMANPNLKFYFREPTIDTNMPITDGTVKIEGFDWELVPDKDAADAWDCGFAARVRAFASGLPHIS
Ga0209705_1019409123300027979Freshwater SedimentMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWEFVPDED
Ga0307503_1092238123300028802SoilMANPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEEACDAWDCGFAARLRAYAKGEAHISI
Ga0247824_1057855213300028809SoilMASPKLKFYFREPTIDTNIPITDGTVKIEGFDWEFVPNEAAADAWDCGFAARVRAYAQAVPHISIP
Ga0308136_102031323300030728MarineMANPKLRFRFREPTVDTNLPLTDGTVKIDGFDLEVLGGSEDSRFEADARDEGFGALVQRKVE
Ga0307498_1002902313300031170SoilMANPKLKFYFREPTIDTNIPITDGSVKIDGFDWEFVPDENQCDAWDCG
Ga0310886_1034258523300031562SoilMANPKLKFYFREPTIDTNIPITDGTVKIDGFDWEFVPNENECDAWDCGFAARVRA
Ga0310885_1006174523300031943SoilMANPKLKFYFREPTIDTNIPITDGTVKIEGFDWEFVPTEDAADAW
Ga0307479_1012674533300031962Hardwood Forest SoilMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWQFVP
Ga0307479_1117260723300031962Hardwood Forest SoilMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWQFVPNEEEADAWDCGFAARVRAY
Ga0310890_1042284713300032075SoilMANPRLRFYFREPTIDLNIPITDGTVKIDGFDWEFVPTEDSCDAWD
Ga0310895_1065397413300032122SoilMPNSKLRFYFREPTVDTNMPITDGTVKVEGFELEIVKREEDADAWDCGFAARVRAH
Ga0307471_10210445613300032180Hardwood Forest SoilMANPKLRFYFREPTIDTNIPITDGTVKIEGFDWQFVPN
Ga0316613_1017079223300033434SoilMANPRLRFYFREPTIDTNIPITDGTVKIEGFDWEFV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.