Metagenome / Metatranscriptome Family F062538

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062538
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	54 residues
Representative Sequence	MRYDFTYIQALQAKARRERSEAIYEMLIAPLVGLLIRAKTEKRITHAARPHFAR
Number of Associated Samples	100
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.23 %
% of genes near scaffold ends (potentially truncated)	33.85 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.692 % of family members)
Environment Ontology (ENVO)	Unclassified (31.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.88% β-sheet: 0.00% Coil/Unstructured: 45.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF14552	Tautomerase_2	33.85
PF11142	DUF2917	28.46
PF00106	adh_short	12.31
PF03466	LysR_substrate	6.92
PF00126	HTH_1	6.15
PF01361	Tautomerase	5.38
PF13561	adh_short_C2	3.85
PF00107	ADH_zinc_N	2.31
PF13602	ADH_zinc_N_2	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.38

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.92 %
Unclassified	root	N/A	3.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.92 %
Unclassified	root	N/A	3.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.92 %
Unclassified	root	N/A	3.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.00 %
Unclassified	root	N/A	3.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.31 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	36.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.08 %
Unclassified	root	N/A	3.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.31 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.62 %
Unclassified	root	N/A	3.08 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2.31 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.62 %
Unclassified	root	N/A	3.08 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.62 %
Unclassified	root	N/A	3.08 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	2.31 %
Deferrisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.62 %
Unclassified	root	N/A	3.08 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	2.31 %
Deferrisoma camini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.62 %
Unclassified	root	N/A	3.08 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	2.31 %
Deferrisoma camini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104753901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	765	Open in IMG/M
3300004114\|Ga0062593_102675444	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300004463\|Ga0063356_101032784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1177	Open in IMG/M
3300004463\|Ga0063356_106521510	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300004480\|Ga0062592_100954032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	779	Open in IMG/M
3300004643\|Ga0062591_102811505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	516	Open in IMG/M
3300004782\|Ga0062382_10058038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1445	Open in IMG/M
3300004798\|Ga0058859_11653224	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300005333\|Ga0070677_10566054	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005333\|Ga0070677_10795145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	540	Open in IMG/M
3300005335\|Ga0070666_10606591	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300005341\|Ga0070691_10421798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	756	Open in IMG/M
3300005341\|Ga0070691_10564596	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300005343\|Ga0070687_100166910	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300005345\|Ga0070692_10874108	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300005438\|Ga0070701_10650360	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300005440\|Ga0070705_100726735	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300005441\|Ga0070700_100762123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	776	Open in IMG/M
3300005543\|Ga0070672_101323271	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005577\|Ga0068857_101626621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	631	Open in IMG/M
3300005616\|Ga0068852_102407905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	547	Open in IMG/M
3300005719\|Ga0068861_101383531	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300005840\|Ga0068870_10401684	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300005843\|Ga0068860_100183292	All Organisms → cellular organisms → Bacteria → Proteobacteria	2024	Open in IMG/M
3300006049\|Ga0075417_10192617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300006844\|Ga0075428_100690495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300006845\|Ga0075421_100840193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300006846\|Ga0075430_100247136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300006846\|Ga0075430_100489446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300006876\|Ga0079217_10066638	All Organisms → cellular organisms → Bacteria → Proteobacteria	1507	Open in IMG/M
3300006876\|Ga0079217_11034789	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006894\|Ga0079215_10673620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	693	Open in IMG/M
3300006918\|Ga0079216_10094852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1430	Open in IMG/M
3300006918\|Ga0079216_10102167	All Organisms → cellular organisms → Bacteria → Proteobacteria	1392	Open in IMG/M
3300007004\|Ga0079218_10377557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300007004\|Ga0079218_10454182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1114	Open in IMG/M
3300007004\|Ga0079218_12328002	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300009094\|Ga0111539_10324448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1792	Open in IMG/M
3300009147\|Ga0114129_10787610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1214	Open in IMG/M
3300009156\|Ga0111538_10513921	Not Available	1518	Open in IMG/M
3300009156\|Ga0111538_10971358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1075	Open in IMG/M
3300009176\|Ga0105242_11225097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	771	Open in IMG/M
3300010040\|Ga0126308_11315177	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300010397\|Ga0134124_10800604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	942	Open in IMG/M
3300010399\|Ga0134127_10085884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2716	Open in IMG/M
3300010399\|Ga0134127_10108214	All Organisms → cellular organisms → Bacteria → Proteobacteria	2450	Open in IMG/M
3300010399\|Ga0134127_10472863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1258	Open in IMG/M
3300011398\|Ga0137348_1078088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	571	Open in IMG/M
3300011420\|Ga0137314_1088123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300011424\|Ga0137439_1057251	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300012891\|Ga0157305_10027039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1085	Open in IMG/M
3300012902\|Ga0157291_10075854	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300012904\|Ga0157282_10138091	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300012906\|Ga0157295_10323723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	547	Open in IMG/M
3300012910\|Ga0157308_10064090	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300013306\|Ga0163162_11042386	All Organisms → cellular organisms → Bacteria → Proteobacteria	925	Open in IMG/M
3300013308\|Ga0157375_13430189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300014272\|Ga0075327_1068158	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300014745\|Ga0157377_10413367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	922	Open in IMG/M
3300015077\|Ga0173483_10869502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	528	Open in IMG/M
3300015371\|Ga0132258_10575948	All Organisms → cellular organisms → Bacteria → Proteobacteria	2824	Open in IMG/M
3300015371\|Ga0132258_13809031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1027	Open in IMG/M
3300015372\|Ga0132256_100716638	All Organisms → cellular organisms → Bacteria → Proteobacteria	1116	Open in IMG/M
3300017792\|Ga0163161_10653414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	871	Open in IMG/M
3300018422\|Ga0190265_10119229	All Organisms → cellular organisms → Bacteria → Proteobacteria	2517	Open in IMG/M
3300018422\|Ga0190265_10172782	All Organisms → cellular organisms → Bacteria → Proteobacteria	2142	Open in IMG/M
3300018429\|Ga0190272_10044525	All Organisms → cellular organisms → Bacteria → Proteobacteria	2521	Open in IMG/M
3300018429\|Ga0190272_13009127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	522	Open in IMG/M
3300018465\|Ga0190269_10184718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1114	Open in IMG/M
3300018466\|Ga0190268_10171839	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300018469\|Ga0190270_10702192	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300018476\|Ga0190274_10673894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300018476\|Ga0190274_12770380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	587	Open in IMG/M
3300018481\|Ga0190271_10168566	All Organisms → cellular organisms → Bacteria → Proteobacteria	2140	Open in IMG/M
3300018481\|Ga0190271_12278199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	647	Open in IMG/M
3300019362\|Ga0173479_10240169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	790	Open in IMG/M
3300019377\|Ga0190264_10295872	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300019377\|Ga0190264_11683089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	563	Open in IMG/M
3300019377\|Ga0190264_12035733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300021264\|Ga0213895_101495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	866	Open in IMG/M
3300023102\|Ga0247754_1019580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300025119\|Ga0209126_1010238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini	2989	Open in IMG/M
3300025893\|Ga0207682_10420306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	632	Open in IMG/M
3300025908\|Ga0207643_10048480	All Organisms → cellular organisms → Bacteria → Proteobacteria	2406	Open in IMG/M
3300025908\|Ga0207643_10344571	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300025925\|Ga0207650_10181425	All Organisms → cellular organisms → Bacteria → Proteobacteria	1678	Open in IMG/M
3300025926\|Ga0207659_10094363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2242	Open in IMG/M
3300025933\|Ga0207706_10380481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1225	Open in IMG/M
3300025938\|Ga0207704_11788105	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300025940\|Ga0207691_10164684	All Organisms → cellular organisms → Bacteria → Proteobacteria	1943	Open in IMG/M
3300025942\|Ga0207689_10457924	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300026035\|Ga0207703_11938866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	565	Open in IMG/M
3300026088\|Ga0207641_11046237	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300026089\|Ga0207648_11534464	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300027360\|Ga0209969_1061842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	592	Open in IMG/M
3300027364\|Ga0209967_1059888	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027378\|Ga0209981_1005313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1708	Open in IMG/M
3300027462\|Ga0210000_1057849	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300027639\|Ga0209387_1253973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	502	Open in IMG/M
3300027665\|Ga0209983_1133835	Not Available	567	Open in IMG/M
3300027691\|Ga0209485_1060090	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300027778\|Ga0209464_10056519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1297	Open in IMG/M
3300027880\|Ga0209481_10026878	All Organisms → cellular organisms → Bacteria → Proteobacteria	2582	Open in IMG/M
3300027886\|Ga0209486_10055586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1994	Open in IMG/M
3300027886\|Ga0209486_10251902	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300027886\|Ga0209486_10379755	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300027907\|Ga0207428_10183081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1582	Open in IMG/M
3300027907\|Ga0207428_10928022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	614	Open in IMG/M
3300027909\|Ga0209382_10389267	Not Available	1554	Open in IMG/M
3300028578\|Ga0272482_10050910	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300028608\|Ga0247819_10501074	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300028812\|Ga0247825_10233870	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300028812\|Ga0247825_10307273	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300028812\|Ga0247825_10309828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1104	Open in IMG/M
3300028812\|Ga0247825_11160866	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300028812\|Ga0247825_11206392	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300031548\|Ga0307408_100641939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	948	Open in IMG/M
3300031548\|Ga0307408_100840666	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300031548\|Ga0307408_100966652	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031548\|Ga0307408_101591990	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300031731\|Ga0307405_10906538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	746	Open in IMG/M
3300031740\|Ga0307468_100242000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1261	Open in IMG/M
3300031824\|Ga0307413_10698862	Not Available	842	Open in IMG/M
3300031824\|Ga0307413_11139586	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031903\|Ga0307407_11554950	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300031908\|Ga0310900_11552928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	559	Open in IMG/M
3300031913\|Ga0310891_10017016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1768	Open in IMG/M
3300032157\|Ga0315912_10159994	All Organisms → cellular organisms → Bacteria → Proteobacteria	1765	Open in IMG/M
3300033551\|Ga0247830_10032064	All Organisms → cellular organisms → Bacteria → Proteobacteria	3272	Open in IMG/M
3300034678\|Ga0314803_109873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.38%
Host-Associated	Host-Associated	44.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.54%
Plants	Host-Associated → Plants	43.85%
Aquatic	Environmental → Aquatic	3.85%
Human	Host-Associated → Human	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.69%
Sediment	Environmental → Aquatic → Sediment	2.31%
Freshwater	Environmental → Aquatic → Freshwater	1.54%
Digestive System	Host-Associated → Human → Digestive System	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	6.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.77%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.15%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.31%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.54%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.77%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021264	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Cave_1	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1047539013	3300000956	Soil	MRIDFAYIQALQAKARRERSEAMYEMLIAPLVGLFIRARNEKRVAHAARPHFAR*
Ga0062593_1026754442	3300004114	Soil	MRTDFAYVQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0063356_1010327843	3300004463	Arabidopsis Thaliana Rhizosphere	MRYDFDTIIAMQARARRQRAEAIYGMLIAPLVDFLFRGKPQERIAHAPRPHLARQG*
Ga0063356_1065215102	3300004463	Arabidopsis Thaliana Rhizosphere	MRTDFAYLQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0062592_1009540321	3300004480	Soil	MRYDFTYIQALQAKARRERSEAIYEMLIAPIVGLFIREKTQKRPTHAARPHFAR*
Ga0062591_1028115051	3300004643	Soil	MRLDFAYIEALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAARPHFAR*
Ga0062382_100580383	3300004782	Wetland Sediment	VRTDFAYIQALQAKARRARSEAIYDMLIAPIVGLFTRARTQKGVSHAAGPHFAR*
Ga0058859_116532242	3300004798	Host-Associated	MRTDFAYLQALQAKARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR*
Ga0070677_105660542	3300005333	Miscanthus Rhizosphere	RFVRLKGNAMRTDFAYLQALQARARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR*
Ga0070677_107951452	3300005333	Miscanthus Rhizosphere	MRYDFTYIQALQAKARRERSEAIYEMLIAPLVGLLIRAKTEKRITHAARPHFAR*
Ga0070666_106065912	3300005335	Switchgrass Rhizosphere	MRTDFAYLQALQARARRERSEAMYEMLIAPIVGLFLRARTEKRVRHAARPHFAR*
Ga0070691_104217983	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	EALQAKARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR*
Ga0070691_105645961	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRLDFAYIEALQAKARRERSEAIYEMLIAPIVGLFIREKTQKRPTHAARP
Ga0070687_1001669103	3300005343	Switchgrass Rhizosphere	MRHDFAYIEALQTKARRARSEAIYEMLIAPLVTFVARALTHKPARHAARPHFAR*
Ga0070692_108741082	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRYDFAYIEALHAKARRARSEAIYEMLIAPLVTFVARALTHKPARHAARPHFAR*
Ga0070701_106503602	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRYDFAYIEALHAKARRARSEAVYEMLIAPLVTFVARALTHKPARHAARPHFAR*
Ga0070705_1007267352	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRIDFASIEALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0070700_1007621232	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRYDFSYIEALHAKARRERSEAIYEMLIAPLVGLFIREKTHKRVRHAARPHFAR*
Ga0070672_1013232712	3300005543	Miscanthus Rhizosphere	RLKGNAMRTDFAYLQALQARARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR
Ga0068857_1016266212	3300005577	Corn Rhizosphere	MRIDFAYIEALQAKARRERSEAIYEMLIAPIVGLFIRARTEKRVRHAPRPHFAR*
Ga0068852_1024079052	3300005616	Corn Rhizosphere	MRYDFAYIEALHAKARRARSEAVYEMLIAPLVTFVARALTHKPARHAAR
Ga0068861_1013835311	3300005719	Switchgrass Rhizosphere	RQLARRLRRRVIRLKGPAMRTDFAYLQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0068870_104016843	3300005840	Miscanthus Rhizosphere	ALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0068860_1001832924	3300005843	Switchgrass Rhizosphere	MRYDFTYIQALQAKARRERSEAIYEMLIAPLVGLLIRAKTEKRITHAA
Ga0075417_101926173	3300006049	Populus Rhizosphere	ALQAKARRERSEAMYEMLIAPIVGLFTRAREQNRAARPHLARQG*
Ga0075428_1006904953	3300006844	Populus Rhizosphere	MRYDFAYLQALQAKARRERSEAMYEMLIAPIVGLFTRAREQDRAARPHLARQG*
Ga0075421_1008401932	3300006845	Populus Rhizosphere	MRYDFAYLEALQAKARRERSEAMYEMLIAPIVGLLTRAREQNRAARPHLARQG*
Ga0075430_1002471362	3300006846	Populus Rhizosphere	MRYDFAYLQALQAKARRERSEAMYEMLIAPIVGLFTRAREQNRAARPHLARQG*
Ga0075430_1004894463	3300006846	Populus Rhizosphere	YDFTYIQALQSRARRERSEAIYEMLIAPLVSLIKHAARPHLARQG*
Ga0079217_100666383	3300006876	Agricultural Soil	MRYDFTYIQALQSRARRERSEAIYRMLIAPLVAFFTRRSAKKELQHAPRPHFAR*
Ga0079217_110347892	3300006876	Agricultural Soil	VTGLKGQTMRIDFAYMQALQTKARRERSEAIYRILIAPLIALLKRPATPKPTPHAPRPHLAGQG*
Ga0079215_106736202	3300006894	Agricultural Soil	MRYDFSYVQALQAKARRERSEAIYEMLIAPLIGLLARSRTQKRVTHAARPHFAR*
Ga0079216_100948523	3300006918	Agricultural Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVGLFFRAKTQKRPSHAPRPHLARQG*
Ga0079216_101021671	3300006918	Agricultural Soil	MRIDFAYMQALQAKARRERSEAIYRILLAPLIGLLKRSATPKETAHAPRPH
Ga0079218_103775573	3300007004	Agricultural Soil	MRIDFAYMQALQTKARRERSEAIYRILIAPLIALLKRPATPKPTPHAPRPHLAGQG*
Ga0079218_104541822	3300007004	Agricultural Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVALFTRRPARKELQHAPRPHFAR*
Ga0079218_123280023	3300007004	Agricultural Soil	MRIDFAYMQALQARARRERSEAIYRILLAPLIGLLKRSATPKETVHAPRPHLARQG*
Ga0111539_103244482	3300009094	Populus Rhizosphere	MRYDFAYIEALHAKARRARSEAVYGMLIAPLVTFVARALTHKPARHAARPHFAR*
Ga0114129_107876103	3300009147	Populus Rhizosphere	MRYDFAYLQALQAKARRERSEAMYEMLIAPIVGLFIRAKEQNRAARPHLARQG*
Ga0111538_105139212	3300009156	Populus Rhizosphere	MRYDFTYIQALQAKARRERSEAIYEMLIAPIVGLFVREKTQKRPTHAAGPHFAR*
Ga0111538_109713583	3300009156	Populus Rhizosphere	MRTDFAQIEALQAKARRARSEAIYGMLIAPVVGLFIRARTDKRIAHAARPHFAR*
Ga0105242_112250971	3300009176	Miscanthus Rhizosphere	MRYDFTYIQALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAARPHF
Ga0126308_113151771	3300010040	Serpentine Soil	MRTDFAYIEALQAKARRARSEAVYEMLIAPVVEFFIRAKHEKRVTRAARPHFAR*
Ga0134124_108006043	3300010397	Terrestrial Soil	MRHDFAYIEALQTKARRARSEAIYEMLIAPLVGLFVRAKPHKRVSHAARPHFAR*
Ga0134127_100858841	3300010399	Terrestrial Soil	MRYDFSYIEALHAKARRERSEAIYEMLIAPLVGLFIREKTHKRVRHAARPH
Ga0134127_101082143	3300010399	Terrestrial Soil	MRHDFAYIEALHTKARRARSEAIYEMLIAPLVGLFVRAKPHKRVSHAARPHFAR*
Ga0134127_104728632	3300010399	Terrestrial Soil	MRTDFAYLQALQARARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR*
Ga0137348_10780883	3300011398	Soil	MRTDFAYIQALQAKARRERSEAIYDMLIAPVVGLFIRAKTQKRVTHAAGPHF
Ga0137314_10881233	3300011420	Soil	KGNTMRYDFTYIQALQAKARRERSEAIYDMLIAPLVGLFSRAKTEKRVTHAAGPHFAR*
Ga0137439_10572513	3300011424	Soil	MRYDFSYVQALQAKARRERSEAVYLMLIAPLVSLLTPKAQKRVAHAPRPHLARQG*
Ga0157305_100270393	3300012891	Soil	MRTDFAYVQALQAKARRERSEAIYQMLIAPIVGLFIRARTEKRVRHAPRPHFAR*
Ga0157291_100758542	3300012902	Soil	MRYDFTYIQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0157282_101380911	3300012904	Soil	MRTDFAYLQALQAKARRERSEAIYEMLIAPIVGLFIRARTEKRVRHAPRPHFAR*
Ga0157295_103237231	3300012906	Soil	MRTDFAYVQALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAAR
Ga0157308_100640902	3300012910	Soil	MRIDFAYIEALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG*
Ga0163162_110423863	3300013306	Switchgrass Rhizosphere	FIRLRGNTMRYDFTYIQALQAKARRERSEAIYEMLIAPIVGLFIREKTQKRPTHAARPHFAR*
Ga0157375_134301891	3300013308	Miscanthus Rhizosphere	MRTDFAYLQALQAKARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPH
Ga0075327_10681581	3300014272	Natural And Restored Wetlands	FSTIQALQSKARRERSEAIYEMLIGPIVRLLARTKEQKRAHHAARPHLARQG*
Ga0157377_104133673	3300014745	Miscanthus Rhizosphere	MRTDFAQIEALQAKARRARSEAIYGMLIAPVVGLFIRARTDKRIAHAA
Ga0173483_108695021	3300015077	Soil	GARRGLCFVRLKGNAMRLDFAYIEALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAARPHFAR*
Ga0132258_105759484	3300015371	Arabidopsis Rhizosphere	RFVRLKGNAMRYDFAYIEALHAKARRARSEAVYEMLIAPLVTFVARALTHKPARHAARPHFAR*
Ga0132258_138090313	3300015371	Arabidopsis Rhizosphere	MRYDFAYIEALHAKARRERSEAIYGMLIAPLVGLFVHSKKEKRVRHAARPHLAGQG*
Ga0132256_1007166383	3300015372	Arabidopsis Rhizosphere	MRYDFAYIEALHAKARRARSEAIYEMLISPLVGLFGRAKPQKRVTHAARPHFAR*
Ga0163161_106534142	3300017792	Switchgrass Rhizosphere	MRYDFTYIQALQAKARRERSEAIYEMLIAPIVGLFIREKTQKRPTHAARPHFAR
Ga0190265_101192294	3300018422	Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLINLLVRSRTQKRVTHAPRPHLARQG
Ga0190265_101727823	3300018422	Soil	MRIDFAYMQALQARARRERSEAMYEMLVAPLIGLLKRLATPKRTVHAPRPHLARQG
Ga0190272_100445252	3300018429	Soil	MRYDFSYVQALQAKARRERSEAIYQMLVAPLIALIKHASRPHLARQG
Ga0190272_130091272	3300018429	Soil	MRYDFSYVQALQGKARRERAEAMYEMLIAPLIRLLTPKAQKRIAHAPRPHLARQG
Ga0190269_101847182	3300018465	Soil	MRYDFSYVQALQAKARRERSEAIYTMLIAPLVALLKRKPTHAAGPHLARQG
Ga0190268_101718392	3300018466	Soil	MRIDFAYMQALQAKARRERSEAIYRMLIAPLVALFTRRSARKELQHAPRPHFAR
Ga0190270_107021923	3300018469	Soil	NAMRTDFAYIQALQAKARRERSEAIYEMLIAPLVGLLFTRAKNQKRVAHAARPHFAR
Ga0190274_106738941	3300018476	Soil	RFVRLKGTAMRIDFAYIQALQAKARRERSEAVYEILIAPLVGLFTRAKTEKRVAHAARPHFAR
Ga0190274_127703802	3300018476	Soil	MRIDFAYIQALQAKARRERSEAVYEILIAPVVGLFTRAKTEKRVAHAARPHFAR
Ga0190271_101685663	3300018481	Soil	MRYDFTYIQALQSRARRERSEAIYGMLIAPLVALFTRRPARKELQHAPRPHFAR
Ga0190271_122781992	3300018481	Soil	MRTDFAYIQALQAKARRERSEAIYEMLVAPLVGLFVRAKTEKRINHAARPHFAR
Ga0173479_102401692	3300019362	Soil	MRHDFAYIEALQTKARRARSEAIYEMLIAPLVGLFVRAKPHKRVSHAARPHFAR
Ga0190264_102958721	3300019377	Soil	TYIQALQSKARRERSEAMYEMLISPLVALLTRKSAKKELHHAPRPHLARQG
Ga0190264_116830893	3300019377	Soil	MRYDFTYMQALQAKARRERSEAMYEMLVSPLVALFTRKSAKKELHHA
Ga0190264_120357332	3300019377	Soil	MRYDFSTMQALQSKARRERSEAMYEMLIAPLVGLFTRAKDQKHIAHAARPHFAR
Ga0213895_1014952	3300021264	Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVALFTRRPARKELQHAPRPHFAR
Ga0247754_10195803	3300023102	Soil	MRTDFAYLQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG
Ga0209126_10102384	3300025119	Soil	MRYDFAYLQALQAKARRERSEAIYAMLIAPLISLLAGSRTQKRVTHAARPHFAR
Ga0207682_104203062	3300025893	Miscanthus Rhizosphere	MRYDFTYIQALQAKARRERSEAIYEMLIAPLVGLLIRAKTEKRITHAARPHFAR
Ga0207643_100484803	3300025908	Miscanthus Rhizosphere	MRTDFAYLQALQARARRERSEAMYEMLIAPIVGLFLRARTEKRVRHAARPHFAR
Ga0207643_103445713	3300025908	Miscanthus Rhizosphere	RVIRLKGPAMRTDFAYLQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQ
Ga0207650_101814253	3300025925	Switchgrass Rhizosphere	MRIDFAYIEALQAKARRERSEAIYEMLIAPIVGLFIRARTEKRVRHAPRPHFAR
Ga0207659_100943632	3300025926	Miscanthus Rhizosphere	MRTDFAYLQALQAKARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR
Ga0207706_103804813	3300025933	Corn Rhizosphere	MRYDFSYIEALHAKARRERSEAIYEMLIAPLVGLFIREKTHKRVRHAARPHFAR
Ga0207704_117881051	3300025938	Miscanthus Rhizosphere	KARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG
Ga0207691_101646843	3300025940	Miscanthus Rhizosphere	MRIDFAYIEALQAKARRERSEAIYEMLIAPLVGLLIRAKTEKRITHAARPHFAR
Ga0207689_104579243	3300025942	Miscanthus Rhizosphere	MRTDFAYLQALQARARRERSEAMYEMLIAPIVGLFVRARTEKRVRHAARPHFAR
Ga0207703_119388661	3300026035	Switchgrass Rhizosphere	MRYDFAYIEALHAKARRARSEAIYEMLIAPLVTFVARALTHKPARH
Ga0207641_110462372	3300026088	Switchgrass Rhizosphere	MRTDFAQIEALQAKARRARSEAIYGMLIAPVVGLFIRARTDKRIAHAARPHFAR
Ga0207648_115344643	3300026089	Miscanthus Rhizosphere	MRTDFAYLQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPR
Ga0209969_10618421	3300027360	Arabidopsis Thaliana Rhizosphere	QRLRFIRLKGSTMRYDFAYLQALQAKARRERSEAIYEMLIAPLIRLLVGSRTQKRVTHAARPHLARQG
Ga0209967_10598882	3300027364	Arabidopsis Thaliana Rhizosphere	MRYDFAYLQALQAKARRERSEAMYRMLVAPLIALLKTKRIVHAPRPHLARQG
Ga0209981_10053133	3300027378	Arabidopsis Thaliana Rhizosphere	MRYDFAYLQALQAKARRERSEAIYEMLIAPLIRLLVGSRTQKRVTHAARPHLARQG
Ga0210000_10578492	3300027462	Arabidopsis Thaliana Rhizosphere	MRYDFAYLQALQAKARRERSEAMYEMLIAPLIALLTRKSAKKELHHAAGPHLARQG
Ga0209387_12539732	3300027639	Agricultural Soil	MRYDFSYVQALQAKARRERSEAIYEMLIAPLVALFTRRPARKELQHAPRPHFAR
Ga0209983_11338351	3300027665	Arabidopsis Thaliana Rhizosphere	GARQRIRFIRLKGSTMRYDFAYLQALQAKARRERSEAMYEMLIAPLIALLTRKSAKKELHHAAGPHLARQG
Ga0209485_10600902	3300027691	Agricultural Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVGLFFRAKTQKRPSHAPRPHLARQG
Ga0209464_100565193	3300027778	Wetland Sediment	VRTDFAYIQALQAKARRARSEAIYDMLIAPIVGLFTRARTQKGVSHAAGPHFAR
Ga0209481_100268784	3300027880	Populus Rhizosphere	MRYDFAYLQALQAKARRERSEAMYEMLIAPIVGLFTRAREQNRAARPHLARQG
Ga0209486_100555863	3300027886	Agricultural Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVTLIKHAARPHLARQG
Ga0209486_102519023	3300027886	Agricultural Soil	ALQTKARRERSEAIYRILIAPLIALLKRPATPKPTPHAPRPHLAGQG
Ga0209486_103797552	3300027886	Agricultural Soil	MRYDFTYLQALQSKARRERSEAMYEFLIAPLVGLFFRVKTQKRPSHAPRPHLARQG
Ga0207428_101830813	3300027907	Populus Rhizosphere	MRYDFAYIEALHAKARRARSEAVYGMLIAPLVTFVARALTHKPARHAARPHFAR
Ga0207428_109280222	3300027907	Populus Rhizosphere	MRLDFAYIEALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAARPHFAR
Ga0209382_103892671	3300027909	Populus Rhizosphere	LRFVRLKGIAMRYDFAYLQALQAKARRERSEAMYEILIAPIVGLFTRAREQDRAARPHLARQG
Ga0272482_100509103	3300028578	Soil	MRYDFAYLQALQAKARRERSEAIYEMLIAPLVGLFIRAKTQKRHAARPHLARQG
Ga0247819_105010741	3300028608	Soil	LCFIRLKGNTMRYDFTYIQALQAKARRERSEAIYEMLIAPLVGLLIRAKTEKRITHAARPHFAR
Ga0247825_102338703	3300028812	Soil	MRYDFTYIQALQAKARRERSEAIYEMLIAPLAGLFFRAKTEKRITHAARPHFAR
Ga0247825_103072732	3300028812	Soil	MRYDFTYIQALQAKARRERSEAIYDMLIAPLVGLFSRAKTEKRVTHAAGPHFAR
Ga0247825_103098281	3300028812	Soil	MRYDFAYLQALQAKARRERSQAIYEMLIAPIVGLFTREREQKRAARPHLARQG
Ga0247825_111608662	3300028812	Soil	SHALQAKARRERSEAIYEMLIAPIVGLFIREKTQKRPTHAARPHFAR
Ga0247825_112063922	3300028812	Soil	LCFVRLKGNAMRLDFAYIEALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAARPHFAR
Ga0307408_1006419393	3300031548	Rhizosphere	MRYDFTYIQALQSRARRERAEAIYQMLIAPLVALIKHAARPHLARQG
Ga0307408_1008406662	3300031548	Rhizosphere	MRYDFTYIQALQSKARRERSEAIYEMLIAPLITLFTRKSAEKKLHHAARPHLARQG
Ga0307408_1009666522	3300031548	Rhizosphere	MTYDFAYLQALQAKARRERSEAMYEMLIAPLISLLVRSRTQKRVTHAPRPHLARQG
Ga0307408_1015919902	3300031548	Rhizosphere	MRIDFAYIQALQARARRERSEAMYRMLVAPLIALLKPKRALHAQALGARSIA
Ga0307405_109065383	3300031731	Rhizosphere	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVALIKHAARPHLARQG
Ga0307468_1002420001	3300031740	Hardwood Forest Soil	MRTDFAYIQALQAKARRERSEAIYDMLIAPIVGLFVREKTEKRVPHAARPHFA
Ga0307413_106988621	3300031824	Rhizosphere	ALQSRARRERSEAIYQMLIAPLVTLIKHAARPHLARQG
Ga0307413_111395862	3300031824	Rhizosphere	MRYDFAYLQALQDKARRERSEAMYEMLIAPLMALFTRKSAKKELHHAAGPHLARQG
Ga0307407_115549502	3300031903	Rhizosphere	MRYDFTYIQALQSRARRERSEAIYGMLIAPLVALIKHAARPHLARQ
Ga0310900_115529281	3300031908	Soil	MRYDFTYIQALQAKARRERSEAIYEMLIAPIVGLFIREKTQKRPTHAAR
Ga0310891_100170161	3300031913	Soil	MRTDFAYLQALQAKARRERSEAIYEMLIAPIVGLLTRARAQKRVSHAARPHFAR
Ga0315912_101599944	3300032157	Soil	MRYDFTYIQALQARARRERSEAIYEMLIAPLVALIKHAARPHLARQG
Ga0247830_100320644	3300033551	Soil	MRYDFTYIQALQSRARRERSEAIYEMLIAPLVALFTRRPAKKELQHAPRPHFAR
Ga0314803_109873_194_358	3300034678	Soil	MRLDFAYIEALQAKARRERSEAIYEMLIAPLAGLFFRAKTEKRITHAARPHFAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062538

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences