Metagenome Family F062537

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062537
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	63 residues
Representative Sequence	MELLLTKPVVVTLAVIGAVLSTAASFLQTRGYVGEKTGKALNYAGYGVMGASMLLFVLAGLWR
Number of Associated Samples	107
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.31 %
% of genes near scaffold ends (potentially truncated)	20.77 %
% of genes from short scaffolds (< 2000 bps)	73.85 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (72.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (20.769 % of family members)
Environment Ontology (ENVO)	Unclassified (40.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (33.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.04% β-sheet: 0.00% Coil/Unstructured: 43.96%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00005	ABC_tran	24.62
PF08669	GCV_T_C	7.69
PF00528	BPD_transp_1	6.15
PF13419	HAD_2	6.15
PF01571	GCV_T	4.62
PF03401	TctC	3.08
PF04392	ABC_sub_bind	2.31
PF13483	Lactamase_B_3	2.31
PF00763	THF_DHG_CYH	2.31
PF06808	DctM	1.54
PF03466	LysR_substrate	1.54
PF07689	KaiB	1.54
PF01925	TauE	1.54
PF02882	THF_DHG_CYH_C	0.77
PF04397	LytTR	0.77
PF01476	LysM	0.77
PF13442	Cytochrome_CBB3	0.77
PF10410	DnaB_bind	0.77
PF12850	Metallophos_2	0.77
PF00866	Ring_hydroxyl_B	0.77
PF04909	Amidohydro_2	0.77
PF02656	DUF202	0.77
PF00355	Rieske	0.77
PF03069	FmdA_AmdA	0.77
PF01471	PG_binding_1	0.77
PF00848	Ring_hydroxyl_A	0.77
PF13545	HTH_Crp_2	0.77
PF00440	TetR_N	0.77
PF02548	Pantoate_transf	0.77
PF13379	NMT1_2	0.77
PF13561	adh_short_C2	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	3.08
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.08
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.31
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.54
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.54
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.77
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.77
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.77
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.77
COG5517	3-phenylpropionate/cinnamic acid dioxygenase, small subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.31 %
Unclassified	root	N/A	27.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.31 %
Unclassified	root	N/A	27.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.31 %
Unclassified	root	N/A	27.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.08 %
Unclassified	root	N/A	27.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.54 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	39.23 %
Unclassified	root	N/A	27.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.69 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	8.46 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples	6.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.08 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.31 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.54 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.69 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	6.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.08 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.54 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.77 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.77 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.69 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	6.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.08 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.54 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.77 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.77 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.77 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002122\|C687J26623_10001521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	4874	Open in IMG/M
3300002122\|C687J26623_10085775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	859	Open in IMG/M
3300002568\|C688J35102_118247685	Not Available	542	Open in IMG/M
3300002906\|JGI25614J43888_10020052	Not Available	2137	Open in IMG/M
3300003324\|soilH2_10198211	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300004062\|Ga0055500_10002690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2478	Open in IMG/M
3300004153\|Ga0063455_101463648	Not Available	531	Open in IMG/M
3300004463\|Ga0063356_100158381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2596	Open in IMG/M
3300004463\|Ga0063356_102468358	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005171\|Ga0066677_10537730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	670	Open in IMG/M
3300005176\|Ga0066679_10741495	Not Available	633	Open in IMG/M
3300005184\|Ga0066671_11040128	Not Available	514	Open in IMG/M
3300005204\|Ga0068997_10074360	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300005540\|Ga0066697_10817731	Not Available	506	Open in IMG/M
3300005558\|Ga0066698_10902308	Not Available	566	Open in IMG/M
3300005559\|Ga0066700_10035520	All Organisms → cellular organisms → Bacteria → Proteobacteria	2956	Open in IMG/M
3300005561\|Ga0066699_10360035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1040	Open in IMG/M
3300005598\|Ga0066706_10435716	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300006049\|Ga0075417_10030740	All Organisms → cellular organisms → Bacteria → Proteobacteria	2223	Open in IMG/M
3300006844\|Ga0075428_100695112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1083	Open in IMG/M
3300006846\|Ga0075430_100738567	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300006876\|Ga0079217_11488864	Not Available	534	Open in IMG/M
3300006894\|Ga0079215_10065785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1471	Open in IMG/M
3300006894\|Ga0079215_10374972	Not Available	827	Open in IMG/M
3300006969\|Ga0075419_10052197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2572	Open in IMG/M
3300007004\|Ga0079218_10192022	All Organisms → cellular organisms → Bacteria → Proteobacteria	1547	Open in IMG/M
3300007004\|Ga0079218_10524057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300007004\|Ga0079218_11529270	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300007004\|Ga0079218_11660695	Not Available	705	Open in IMG/M
3300007255\|Ga0099791_10016321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	3160	Open in IMG/M
3300007255\|Ga0099791_10099017	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300009012\|Ga0066710_100415836	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300009038\|Ga0099829_10947973	Not Available	714	Open in IMG/M
3300009089\|Ga0099828_10022589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4942	Open in IMG/M
3300009147\|Ga0114129_10886447	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300009147\|Ga0114129_12606474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	603	Open in IMG/M
3300009157\|Ga0105092_10352670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	834	Open in IMG/M
3300009157\|Ga0105092_10709530	Not Available	585	Open in IMG/M
3300009597\|Ga0105259_1137963	Not Available	590	Open in IMG/M
3300009609\|Ga0105347_1416473	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300009610\|Ga0105340_1000963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13328	Open in IMG/M
3300009610\|Ga0105340_1004468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5766	Open in IMG/M
3300009803\|Ga0105065_1042967	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300009806\|Ga0105081_1031531	Not Available	703	Open in IMG/M
3300010399\|Ga0134127_11690016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	708	Open in IMG/M
3300011395\|Ga0137315_1006615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1277	Open in IMG/M
3300011402\|Ga0137356_1032708	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300011409\|Ga0137323_1009376	All Organisms → cellular organisms → Bacteria → Proteobacteria	2287	Open in IMG/M
3300011417\|Ga0137326_1074158	Not Available	760	Open in IMG/M
3300011438\|Ga0137451_1116118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300011440\|Ga0137433_1031104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300011442\|Ga0137437_1132755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	859	Open in IMG/M
3300011443\|Ga0137457_1059457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1138	Open in IMG/M
3300012015\|Ga0120187_1005874	Not Available	947	Open in IMG/M
3300012022\|Ga0120191_10030744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	834	Open in IMG/M
3300012137\|Ga0137346_1066479	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300012146\|Ga0137322_1020911	Not Available	897	Open in IMG/M
3300012172\|Ga0137320_1033609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300012175\|Ga0137321_1080633	Not Available	725	Open in IMG/M
3300012189\|Ga0137388_10627586	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300012204\|Ga0137374_10706343	Not Available	757	Open in IMG/M
3300012205\|Ga0137362_10282707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1435	Open in IMG/M
3300012361\|Ga0137360_11808424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	517	Open in IMG/M
3300012684\|Ga0136614_10109416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2096	Open in IMG/M
3300012685\|Ga0137397_10097457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2152	Open in IMG/M
3300012922\|Ga0137394_10285287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1411	Open in IMG/M
3300012922\|Ga0137394_10658573	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300012922\|Ga0137394_10936306	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012922\|Ga0137394_11009012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	691	Open in IMG/M
3300012925\|Ga0137419_10536502	Not Available	933	Open in IMG/M
3300012927\|Ga0137416_11771028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	564	Open in IMG/M
3300012930\|Ga0137407_10599143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1034	Open in IMG/M
3300014861\|Ga0180061_1050573	Not Available	682	Open in IMG/M
3300014866\|Ga0180090_1026622	Not Available	917	Open in IMG/M
3300014872\|Ga0180087_1020086	Not Available	1187	Open in IMG/M
3300014879\|Ga0180062_1119280	Not Available	605	Open in IMG/M
3300014884\|Ga0180104_1044686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1174	Open in IMG/M
3300014885\|Ga0180063_1032216	All Organisms → cellular organisms → Bacteria → Proteobacteria	1465	Open in IMG/M
3300015257\|Ga0180067_1083884	Not Available	708	Open in IMG/M
3300015259\|Ga0180085_1131350	Not Available	747	Open in IMG/M
3300015371\|Ga0132258_12736577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1230	Open in IMG/M
3300017789\|Ga0136617_10019743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	6011	Open in IMG/M
3300018059\|Ga0184615_10002207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	10483	Open in IMG/M
3300018059\|Ga0184615_10237900	Not Available	1021	Open in IMG/M
3300018063\|Ga0184637_10054521	All Organisms → cellular organisms → Bacteria → Proteobacteria	2442	Open in IMG/M
3300018063\|Ga0184637_10560617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	655	Open in IMG/M
3300018083\|Ga0184628_10009630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4666	Open in IMG/M
3300018422\|Ga0190265_10002167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13118	Open in IMG/M
3300018429\|Ga0190272_10030431	All Organisms → cellular organisms → Bacteria → Proteobacteria	2925	Open in IMG/M
3300018429\|Ga0190272_10090640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1929	Open in IMG/M
3300018429\|Ga0190272_10447771	Not Available	1075	Open in IMG/M
3300019377\|Ga0190264_10839852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	706	Open in IMG/M
3300020060\|Ga0193717_1187407	Not Available	571	Open in IMG/M
3300021476\|Ga0187846_10000008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	116082	Open in IMG/M
3300022694\|Ga0222623_10061885	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300025001\|Ga0209618_1032589	Not Available	839	Open in IMG/M
3300025155\|Ga0209320_10014690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	3824	Open in IMG/M
3300025160\|Ga0209109_10000391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	22947	Open in IMG/M
3300025319\|Ga0209520_10371110	Not Available	864	Open in IMG/M
3300025324\|Ga0209640_10156560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1949	Open in IMG/M
3300025955\|Ga0210071_1037258	Not Available	617	Open in IMG/M
3300026318\|Ga0209471_1093987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1305	Open in IMG/M
3300026319\|Ga0209647_1002273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	15620	Open in IMG/M
3300027513\|Ga0208685_1000395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	15408	Open in IMG/M
3300027533\|Ga0208185_1001646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	6294	Open in IMG/M
3300027533\|Ga0208185_1008293	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598	Open in IMG/M
3300027655\|Ga0209388_1090884	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300027691\|Ga0209485_1267575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	555	Open in IMG/M
3300027722\|Ga0209819_10104247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	990	Open in IMG/M
3300027722\|Ga0209819_10333620	Not Available	519	Open in IMG/M
3300027748\|Ga0209689_1017277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4557	Open in IMG/M
3300027862\|Ga0209701_10083064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2017	Open in IMG/M
3300027873\|Ga0209814_10012868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3318	Open in IMG/M
3300027875\|Ga0209283_10021091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3995	Open in IMG/M
3300027875\|Ga0209283_10921151	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300027880\|Ga0209481_10180282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1051	Open in IMG/M
3300027909\|Ga0209382_11267562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	749	Open in IMG/M
3300030619\|Ga0268386_10139485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1854	Open in IMG/M
3300030620\|Ga0302046_10054204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3257	Open in IMG/M
3300031199\|Ga0307495_10144886	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300031720\|Ga0307469_10217720	Not Available	1507	Open in IMG/M
3300031720\|Ga0307469_11632929	Not Available	620	Open in IMG/M
3300031740\|Ga0307468_100285954	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300031820\|Ga0307473_11126750	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300031965\|Ga0326597_10280002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	1907	Open in IMG/M
3300031965\|Ga0326597_11243019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	732	Open in IMG/M
3300033407\|Ga0214472_10427265	Not Available	1240	Open in IMG/M
3300033417\|Ga0214471_10007866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8252	Open in IMG/M
3300033417\|Ga0214471_10742124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	769	Open in IMG/M
3300034147\|Ga0364925_0096184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1047	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.77%
Host-Associated	Host-Associated	9.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.46%
Aquatic	Environmental → Aquatic	32.31%
Plants	Host-Associated → Plants	9.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.92%
Sediment	Environmental → Aquatic → Sediment	25.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.92%
Freshwater	Environmental → Aquatic → Freshwater	4.62%
Marine	Environmental → Aquatic → Marine	2.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.31%
Cave	Environmental → Terrestrial → Cave	0.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	25.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.92%
Loam	Environmental → Terrestrial → Soil → Loam	4.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.31%
Ice	Environmental → Aquatic → Freshwater → Ice	1.54%
Sand	Environmental → Terrestrial → Soil → Sand	1.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.54%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	25.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.31%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.54%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	20.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.15%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.31%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.54%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.54%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.77%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011395	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012015	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep1	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012137	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025001	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 3 (SPAdes)	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26623_100015211	3300002122	Soil	MELLLTRPVVVTLAVLGALLASAASLLQLRGYLNPTSARALNWAGYGCMGASMLLFALAG
C687J26623_100857751	3300002122	Soil	LAVLGAALSSAASFLQMRGYLGAKAARALNWAGYGCMGASMLLFALAGLWR*
C688J35102_1182476852	3300002568	Soil	MEFLLSKPVVVALAVLGALLSSAASFLQVRGYVSAAVARGLNWAGYGVMAASMLVFVLAGLWG*
JGI25614J43888_100200522	3300002906	Grasslands Soil	MDLLLTKAVVVSLAILGAALSTLASFLQTRNRISATTARALNYAGYAVMAVSMVLFALAGLWS*
soilH2_101982112	3300003324	Sugarcane Root And Bulk Soil	MEILLSKPVVVALALAGAVLSTVASWLQTRGKVSEKTGRAINYAGYGAMAASMLLFVLAGLLR*
Ga0055500_100026904	3300004062	Natural And Restored Wetlands	MELLLTRPVVVALAVLGAVLSFSASFLQVRGYVGEKASRVLNWTGYGFMGASMLLFALAGLLG*
Ga0063455_1014636481	3300004153	Soil	VEVLLAKPVVVALAVLGAILSSLASFLQIRGHLGAKGARVLNYAGYGCMGVSMLFFVLAGLRR*
Ga0063356_1001583811	3300004463	Arabidopsis Thaliana Rhizosphere	MEVVFSKPVVVALAVAGALLCTGASFLQLRGYVGEKAGKAMNWAGYGVMGASMLLFVLAGLRGV
Ga0063356_1024683582	3300004463	Arabidopsis Thaliana Rhizosphere	MEFLLTKPVVVTLAIVGAILSSSASFLQMRGYVSAQVAKALNWAGYGVMGASMLLFVLAGLWS*
Ga0066677_105377302	3300005171	Soil	MDLLLNRGVVIALALLGAVLSSLASFLELRGYVGPKAGRVINWTGYGCMGVSMLLFALAGLLG*
Ga0066679_107414952	3300005176	Soil	MSLLLTKTVVIALAVFGAILSSSASFLQTRGYVGEKAARAINYAGYGCMGVSMVLFALAGLWS*
Ga0066671_110401282	3300005184	Soil	MELLLGKTVVVALALLGAALSSSASFLQMRGYVGAKGARAINYAGYGCMGVSMVLFALAGLWS*
Ga0068997_100743602	3300005204	Natural And Restored Wetlands	MELLLTRPVVVALAVLGAVLSFSASFLQVRGYVGEKASRALNWTGYGFMGASMLLFALAGLLG*
Ga0066697_108177312	3300005540	Soil	MDFLLNRGVVIALAVLGAVLSSLASFLELRGYVSPKAGRVINWTGYGCMGVSMLLFALAGLLG*
Ga0066698_109023081	3300005558	Soil	MDFLLNRGVVIALAVLGAVLSSLASFLELRGYVSPKAGRVINWTGYGCMGISMLLFALAGLLG
Ga0066700_100355204	3300005559	Soil	MELLFTKAAVVALALLGAALSSLASFLQTRGRLGEKSARAINYAGYGCMGVSMVLFALAGLWR*
Ga0066699_103600353	3300005561	Soil	LLNRGVVIALAVLGAVLSSLASFLELRGYVGPKAGRVINWTGYGCMGVSMLLFALAGLLG
Ga0066706_104357161	3300005598	Soil	QARQPRLMDALLTKPVVVALGILGAILSSSASFLQMRGYVGAKGARAINYAGYGCMGVSMVLFALAGLWS*
Ga0075417_100307401	3300006049	Populus Rhizosphere	LTELLLTKPVVVTLAVIGAVLATAASMLQKRGIVGERGAKILNYAGYGVMAASMLLFVLAGLRGAPA*
Ga0075428_1006951122	3300006844	Populus Rhizosphere	MEVVFSKPVVVALAVAGALLCTGASFLQLRGYVGEKAGKAMNWAGYGVMGASMLLFVLAGLRGVQA*
Ga0075430_1007385671	3300006846	Populus Rhizosphere	RRVSQARAAHVMELVITKPVVVALAVAGALLCTGASFLQMRGYVGEKAGKALNWAGYGVMGASMLLFVLAGLRGVPA*
Ga0079217_114888642	3300006876	Agricultural Soil	MEVLLTKPAVVTLAIVGAVLCTAASFLQMRGYVSEKTGKAINYAGYGVMGASMLLFALAGLLR*
Ga0079215_100657851	3300006894	Agricultural Soil	MERLLSKPVVVTLAIIGAVLSTAASLLQTRGYVTEKTGKALNYAGYGVMAASMLLFVLVGLWR*
Ga0079215_103749722	3300006894	Agricultural Soil	LLLTKPVVVSLAVLGALLSTAASFLQMRGYVSEKTGKAMNYAGYGVMGASMLLFVLAGLWR*
Ga0075419_100521972	3300006969	Populus Rhizosphere	MEVVFSKPVVVALAVAGALLCTGASFLQLRGYVGEKAGKAMNWAGYGVMGASMLLFVLAGLRGVPA*
Ga0079218_101920223	3300007004	Agricultural Soil	LPQARQPRLMELLLTKPVVVFLAVLGALLATAASFLQMRGYVSEKTGKAMNYAGYGVMGASMLFFVLAGLWR*
Ga0079218_105240572	3300007004	Agricultural Soil	MELLLTKPVVVSLAVLGALLSTAASFLQMRGYVSEKTGKAMNYAGYGVMGASMLLFVLAGLWR*
Ga0079218_115292702	3300007004	Agricultural Soil	LELLLSRPIVVALAVLGAILSSSASFLQMRGYVSEKTGRALNWAGYGAMGASMLLFALAGLWS*
Ga0079218_116606952	3300007004	Agricultural Soil	MEILLTKPVVVLLAILGALLATAASFLQMRGYVSEKIGKAMDYAGYGVMGASMLLFVLAGLWR*
Ga0099791_100163212	3300007255	Vadose Zone Soil	MEFLLSKPVVVALAIFGALLSSAASFLQVRGYVSAAVARGLNWAGYGVMAASMLLFVLAGLWG*
Ga0099791_100990172	3300007255	Vadose Zone Soil	MSLLLTKTVVIALAVLGAILSSSASFLQTRGYVGEKAARAINYAGYGCMGVSMVLFALAGLWS*
Ga0066710_1004158362	3300009012	Grasslands Soil	MDFLLSRPVVVTLAIIGAVLATAASLLQSRGIIGQRGARILNYAGYGVMGVSMLLFALAGLWS
Ga0099829_109479732	3300009038	Vadose Zone Soil	MDLLLTKPVVVSLAIVGAVLSTAAFVLQTRGILNERNAQLLNYAGYGVMGASMLLFVLAGLWG*
Ga0099828_100225894	3300009089	Vadose Zone Soil	VELLLSRPIVVTLAVLGALLSTAASILQSRGLVGERRARVLNYAGYGCMGASMLLFALAGLLGAAG*
Ga0114129_108864472	3300009147	Populus Rhizosphere	MELVITKPVVVALAVAGALLCTGASFLQLRGYVGEKAGKAMNWAGYGVMGASMLLFVLAGLRGVPA*
Ga0114129_126064741	3300009147	Populus Rhizosphere	MRDLLLSRGLVIALAVLGAVLSSLASFLELRGYVSPKAGRAINWTGYGCMGASMLLFALAGLLG*
Ga0105092_103526701	3300009157	Freshwater Sediment	MEVLLTKPVVVTLAVIGALLSTAASSLQTRNYVSEKTGKAMNYAGYGAMGASMLLFVLAGLWGPR*
Ga0105092_107095302	3300009157	Freshwater Sediment	MELLLTKPAVVSLAIIGALLSTAASFLQTRGKISEKTGKAINYAGYGAMGASMLFFALAGLLRS*
Ga0105259_11379631	3300009597	Soil	MELLLAKPVVVTLAILGAVLSTAASFLQTRNYVSEKTGKALNWAGYGVMGASMLLFVLAGLWR*
Ga0105347_14164732	3300009609	Soil	MEFLLTKPVVVTLAVLGAVLSSLASFLLTRGRISEKTSRALNYAGYSVMGTSMLLFVLAGLWR*
Ga0105340_100096310	3300009610	Soil	MELLLSKPVVVTLAIIGAVFSTAASFLQTRGYVSERTAKALNYAGYGVMGASMLLFVLAGLWR*
Ga0105340_10044682	3300009610	Soil	MELLLTKPAVVTLAVLGALLSTSASFLQMRGTIGEKTAKALNWVGYGVMGASMLLFVLAGLWR*
Ga0105065_10429672	3300009803	Groundwater Sand	MELLLTRPVVVALAVLGAVLSSSASFLQMRGYVSEKAARALNWVGYGVMGASMLLFVLAGLWR*
Ga0105081_10315311	3300009806	Groundwater Sand	MELLLTRPVVVALAVLGAVLSSSASFLQMRGDVGAKAARVLNYAGYGCMGVSKLLFALAGLLGIPD*
Ga0134127_116900162	3300010399	Terrestrial Soil	MEFLLAKSVVVTLAIVGAILSSSASFLQMRGYVSAQVAKALNWAGYGVMGASMLLFVLAGLWR*
Ga0137315_10066153	3300011395	Soil	MELLLAKPVVVTLAILGAALSTAASLLQTRNYVSEKTGKALNWAGYGVMGASMLLFVLAGLWR*
Ga0137356_10327082	3300011402	Soil	MELLLTKPVVVTLAVIGAVLSTAASFLQTRGYVGEKTGKALNYAGYGVMGASMLLFVLAGLWR*
Ga0137323_10093761	3300011409	Soil	LMEFLLTKPVVVTLAVLGAVLSSLASFLLTRGRISEKTSRALNYAGYSVMGTSMLLFVLAGLWR*
Ga0137326_10741582	3300011417	Soil	MELLLTKPVVVTLAVIGAVLSTAASFLQTRGYVSERTGKALNYTGYGVMGASMLLFVLAGLWR*
Ga0137451_11161181	3300011438	Soil	LAIIGAVLSTAASFLQTRGYVSERTGKALNYAGYSVMGASMLLFALAGLWR*
Ga0137433_10311043	3300011440	Soil	MEVVLAKPVVVGLAIVGGILAAAASYLQMRGYVSEKIAKVINWAGYGAMGASMLLFVLAGLLQ*
Ga0137437_11327552	3300011442	Soil	MEFLLTKPVVVTLAIVGALLSSAASFLQMRGYLSAKAAKALNWAGYGLMGASMLVFVLAGLWG*
Ga0137457_10594573	3300011443	Soil	MELLLAKPVVVTLAILGAALSTAASLLQTRNYVSEKTGKALNWAGYGVMGASM
Ga0120187_10058741	3300012015	Terrestrial	MEVLLSKTVVVTLAVIGAVLSTAASFLQTRGYVGERVGKALNYAGYGVMGASMLLFVLAGLWR*
Ga0120191_100307442	3300012022	Terrestrial	MEILLTKAVVVTLAIIGAVLSTAASFLQRRGNVSEKTGRAINYAGYGVMVASMLLFVLAGLWR*
Ga0137346_10664792	3300012137	Soil	VVTLAVIGAVLATAASLLQRRGIVGERGARILNYAGYGVMGASMLLFALAGLLR*
Ga0137322_10209112	3300012146	Soil	MELLLTKPVVVTLAIIGAVLSTSASFLQTRGYVSEKAGKAINYAGYGVMGAS
Ga0137320_10336091	3300012172	Soil	KPVVVTLAILGAALSTAASLLQTRNYVSEKTGKALNWAGYGVMGASMLLFVLAGLWR*
Ga0137321_10806331	3300012175	Soil	MEILLTKPVVVSLAVLGAVLCTLASFLQTRGTISAKAGNALNWAGYGLMGASMLLFVLAGLWR*
Ga0137388_106275862	3300012189	Vadose Zone Soil	MELLLTKPVVVALAIVGAALSSSASFLQMRGYVGAKGARALNYAGYGCMGVSMVLFALAGLWS*
Ga0137374_107063431	3300012204	Vadose Zone Soil	MELLLTKPVVVSLAILGAVLSSLSSFLQTRGRISEKAGRILNYTGYGLMGLSMLLFALAGLWS*
Ga0137362_102827073	3300012205	Vadose Zone Soil	MELLLSRPVVVGLAVLGALLSAGSSVLQLRGYAGEKAARAINWAGYVLMAASMLLVVLAGLRGVQA*
Ga0137360_118084242	3300012361	Vadose Zone Soil	VVVGLAVLGALLSAGSSVLQLRGYAGEKAARAINWAGYVLMAASMLLLVLAGLRGVQA*
Ga0136614_101094162	3300012684	Polar Desert Sand	MEVLLTRPAVVALAVLGALLAAAASLLQVRGAIGEKSARALNYVGYGCMGVSMLLFIFAGLRGASA*
Ga0137397_100974573	3300012685	Vadose Zone Soil	MELLLSRPVVVGLAVLGAALSSSASFLQMRGYVGAKAARAINYAGYGCMGVSMVLFALTGLWT*
Ga0137394_102852872	3300012922	Vadose Zone Soil	MELLLSRPVVIGLAVLGAVLSSSASLLQMRGYIGEKAGRALNWAGYGVMGASMLLFVLARLWS*
Ga0137394_106585732	3300012922	Vadose Zone Soil	MDFLLTRPVVVTLAIFGAALSSLASFLQTRGRISEKTGRVLNYAGYGCMGVSMLLFALAGLWS*
Ga0137394_109363062	3300012922	Vadose Zone Soil	MDLLLTRPVVVALAVLGAVLSSLASFLQMRGYVGDKAARALNWTGYGFMGASMLLFVLAGLWR*
Ga0137394_110090122	3300012922	Vadose Zone Soil	MDLLLNRGVVIALAVLGAVLSSLASFLELRGYVGPKAGRVINWTGYGCMSVSMLLFALAGLLG*
Ga0137419_105365021	3300012925	Vadose Zone Soil	MSLLLTKTVVIALAVLGAILSSSASFLQTRGYVGEKAARAINYAGYGCMGVSMVLFAFAGLWS*
Ga0137416_117710282	3300012927	Vadose Zone Soil	MELLLSRPMVIGLAVLGALLSAGSSLLQLRGYVGEKAARAINWAGYVLMAASMLLFALAGLTR*
Ga0137407_105991432	3300012930	Vadose Zone Soil	MELLLSRPVVVALAVLGALLTAGSSVLQLRGYVGEKAARAINWAGYVLMAASMLLVVLAGLRGVQA*
Ga0180061_10505732	3300014861	Soil	MELLLAKPVVVTLAILGAVLSTAASFLQTRNYVSEKTGKALNYAGYGVMGASMLLFVLAGLWR*
Ga0180090_10266221	3300014866	Soil	MEFLLTKPVVVTLAVLGAVLSSLASFLLTRGRISEKTSRALNYAGYSVMGTSMLLFVLAG
Ga0180087_10200862	3300014872	Soil	MELLLSKPVVVTLAIIGAVFSTAASFLQTRGYVGEKAAKALNWAGYGVMGASMLLFVLAGLWR*
Ga0180062_11192801	3300014879	Soil	MEFLLTKPVVVTLAIIGAVLSTAASFLQARGYVSERTGKALNWAGYGVMGASMLLFVLAGLWS*
Ga0180104_10446862	3300014884	Soil	MEFLLTKPVVVTLAIIGAVLSTAASFLQARGYVSERTGKALNWAGYGVMGASMLLFVLAGLWR*
Ga0180063_10322162	3300014885	Soil	MEFLLAKPVVVTLAIIGAVLSTTASFLQARGYVSERTGKALNYAGYGVMGASMLLFVLAGLWR*
Ga0180067_10838841	3300015257	Soil	MELLLTKPVVVTLAVIGAVLSTAASFLQTRGYVSERTGKALNYTGYGVMGASMLL
Ga0180085_11313502	3300015259	Soil	MEFLLAKPVVVTRAVIGAVLSTSASFLQTRGYVSEKAGKAINYAGYGVMGASMLLFVLAGLWR*
Ga0132258_127365771	3300015371	Arabidopsis Rhizosphere	MELLLTKPVVVTLAIVGALLSSAASFLQVRGYVSVTVAKTLNWAGYGVMGASMLLFVLAGLWG*
Ga0136617_100197431	3300017789	Polar Desert Sand	MEVLLTRPAVVALAVLGALLAAAASLLQVRGAIGEKSARALNYVGYGCMGVSMLLFIFAGLRGASA
Ga0184615_100022072	3300018059	Groundwater Sediment	MPTSSARAAHSASMELVLNRPVVVAFAVLGALLASAASLLRRRGMLGEKGARALDCAGYGCMGVSMLLFALAGLRGAAA
Ga0184615_102379002	3300018059	Groundwater Sediment	MEILLTKPVVVTLAVIGAVLSSAASFLQGRGYVGEKAGKALNRAGYGLMGASMLLFVLAGLWS
Ga0184637_100545212	3300018063	Groundwater Sediment	MELLLTKPVVITLAVLGAILSTSASFLQTRGYVSEKAGRALNWAGYGVMGISMLLFVLAGLWAKAP
Ga0184637_105606172	3300018063	Groundwater Sediment	MEVLLSKPVVVTLAIIGAVLSAAASFLQTRGYVSERTAKALNYAGYGVMGVSMLLFVLAGLWVRPT
Ga0184628_100096304	3300018083	Groundwater Sediment	MEFLLTKPVVVTLAIVGALLSSAASFLQMRGYLSAKAAKALNWAGYGLMGASMLVFVLAGLWG
Ga0190265_100021679	3300018422	Soil	MEVLLTKPVVVTLAIAGAVLSTAASFLQARNYVSERTGKALNYAGYGVMGASMLLFVLAGLWR
Ga0190272_100304314	3300018429	Soil	MEFLLTKSSVVTLAVLGAVLCSLASYLQTRGRVSEKTGKALNYAGYGAMAASMLLFVLAGLWR
Ga0190272_100906403	3300018429	Soil	MELLLNRPVVIGLALLGALLAAGASFLQLRGHIGEKTGRALNWAGYAFMGASMLLFALAGLLGAGSAQVR
Ga0190272_104477712	3300018429	Soil	LIEVLLSKPVVVTLAILGAVLCSLASFFQTRRRISEKTANALNWAGYAVMGASMLLFVLAGLWR
Ga0190264_108398522	3300019377	Soil	GLRRRLPQALQRRLIELLLSKPVVVALAVLGAALCSLASFLKLRGTIGEKTDKRMNYAGYGVMGASMLLFVLAGLWR
Ga0193717_11874072	3300020060	Soil	MEVLLSKPVVVTLAVLGAVLSTAASYLQTRGYVTEKTGKALNWAGYSVMAASMLLFVLAGLWR
Ga0187846_1000000819	3300021476	Biofilm	MELLLTRPVVVALAVLGALLAGAASFLQVHGHIGEKAGRALNWAGYGLMGASMLLFALAGLLG
Ga0222623_100618852	3300022694	Groundwater Sediment	MEFLLNRPVVVGLAVLGAVLSSLASFLQMRGYIDDKAARALNWAGYGVMGASMLLFALIGLLG
Ga0209618_10325892	3300025001	Soil	MELLLTRPVVVTLAVLGALLASAASLLQLRGYLNPTSARALNWAGYGCMGASMLLFALAGLRS
Ga0209320_100146905	3300025155	Soil	MELLLTRPVVVTLAVLGALLASAASLLQLRGYLNPTSARALNWAGYGCMGASMLLFAFAGLWS
Ga0209109_1000039115	3300025160	Soil	MELLLTRPVVVTLAVLGALLASAASLLQLRGYLNPTSARALNWAGYGCMGASMLLFALAGLWR
Ga0209520_103711101	3300025319	Soil	MELLLTRPVVVTLAVLGALLASAASLLQLRGYLNPTSARALNWAGYGCMGASMLLFALAGLWS
Ga0209640_101565603	3300025324	Soil	MELLLTRPAVITLAVLGAALSSAASFLQMRGYLGAKAARALNWAGYGCMGASMLLFALAGLWR
Ga0210071_10372582	3300025955	Natural And Restored Wetlands	MELLLTRPVVVALAVLGAVLSFSASFLQVRGYVGEKASRALNWTGYGFMGASMLLFALAGLLG
Ga0209471_10939871	3300026318	Soil	MSLLLTKTVVIALAVFGAILSSSASFLQTRGYVGEKAARAINYAGYGCMGVSMVLFALAGLWS
Ga0209647_100227316	3300026319	Grasslands Soil	MDLLLTKAVVVSLAILGAALSTLASFLQTRNRISATTARALNYAGYAVMAVSMVLFALAGLWS
Ga0208685_100039516	3300027513	Soil	MELLLAKPVVVTLAILGAVLSTAASFLQTRNYVSEKTGKALNWAGYGVMGASMLLFVLAGLWR
Ga0208185_10016465	3300027533	Soil	MELLLSKPVVVTLAIIGAVFSTAASFLQTRGYVSERTAKALNYAGYGVMGASMLLFVLAGLWR
Ga0208185_10082932	3300027533	Soil	MELLLTKPAVVTLAVLGALLSTSASFLQMRGTIGEKTAKALNWVGYGVMGASMLLFVLAGLWR
Ga0209388_10908842	3300027655	Vadose Zone Soil	MSLLLTKTVVIALAVLGAILSSSASFLQTRGYVGEKAARAINYAGYGCMGVSMVLFALAGLWS
Ga0209485_12675752	3300027691	Agricultural Soil	MEVLLTKPAVVTLAIVGAVLCTAASFLQMRGYVSEKTGKAINYAGYGVMGASMLLFALAGLLR
Ga0209819_101042472	3300027722	Freshwater Sediment	MEVLLTKPVVVTLAVIGALLSTAASSLQTRNYVSEKTGKAMNYAGYGAMGASMLLFVLAGLWGPR
Ga0209819_103336202	3300027722	Freshwater Sediment	MELLLTKPAVVSLAIIGALLSTAASFLQTRGKISEKTGKAINYAGYGAMGASMLFFALAGLLRS
Ga0209689_10172775	3300027748	Soil	MELLFTKAAVVALALLGAALSSLASFLQTRGRLGEKSARAINYAGYGCMGVSMVLFALAGLWR
Ga0209701_100830641	3300027862	Vadose Zone Soil	RQPRLMELLLTRPVVVALAVLGAVLSSSASFLQMRGYIGEKAGRALNWAGYGVMGASMALFALAGLWS
Ga0209814_100128685	3300027873	Populus Rhizosphere	LTELLLTKPVVVTLAVIGAVLATAASMLQKRGIVGERGAKILNYAGYGVMAASMLLFVLAGLRGAPA
Ga0209283_100210914	3300027875	Vadose Zone Soil	VELLLSRPIVVTLAVLGALLSTAASILQSRGLMGERRARVLNYAGYGCMGASMLLFALAGLLGAAG
Ga0209283_109211512	3300027875	Vadose Zone Soil	ARLESRGRLRRGLPQARQPRLMDLLLTKPVVVSLAIVGAVLSTAAFVLQTRGILNERNAQLLNYAGYGVMGASMLLFVLAGLWG
Ga0209481_101802822	3300027880	Populus Rhizosphere	MEVVFSKPVVVALAVAGALLCTGASFLQLRGYVGEKAGKAMNWAGYGVMGASMLLFVLAGLRGVPA
Ga0209382_112675622	3300027909	Populus Rhizosphere	MEVVFSKPVVVALAVAGALLCTGASFLQLRGYVGEKAGKAMNWAGYGVMGASMLLFVLAGLRGVQA
Ga0268386_101394853	3300030619	Soil	ITLAVLGAALSTAASFLQMRGYLGAKAARALNWAGYGCMGASMLLFALAGLWG
Ga0302046_100542044	3300030620	Soil	MELLLTRPAVITLAVLGAALSTAASFLQVRGYVGERGARLLNWAGYGCMGASMLLFALAGLWG
Ga0307495_101448862	3300031199	Soil	VKAAVVTLAILGALLSSAASFLQMRGYVSAAISRGLNWAGYGVMGASMLLFVLAGLL
Ga0307469_102177203	3300031720	Hardwood Forest Soil	MEILLTKTVVVALALLGAALSSLASFLQTRNRISGKSARALNYAGYGCMGVSMALFALAGLWG
Ga0307469_116329292	3300031720	Hardwood Forest Soil	MELLLSRPVVIGLALLGAVLSSAASFLQARKFLSERNARLLNYAGYGAMGASMLLFAL
Ga0307468_1002859542	3300031740	Hardwood Forest Soil	MEILLTKTVVVALALLGAALSSLASFLQTRNRISEKSARALNYAGYGCMGVSMVLFALAGLWG
Ga0307473_111267502	3300031820	Hardwood Forest Soil	MEILLTKPLVVALAVIGAALSTAASMLQKRGLVGERSARILNYAGYGVMVASMLLFALAGLRGVSG
Ga0326597_102800023	3300031965	Soil	MELLLTRPAVITLAVLGAALSTAASFLQMRGYLGAKAARALNWAGYGCMGASMLLFALAGLWS
Ga0326597_112430192	3300031965	Soil	MELLLTRPAVITLAVLGAALSTAASFLQMRGYLGAKAARALNWAGYGCMGASMLLFALAGLWR
Ga0214472_104272653	3300033407	Soil	VVVTLAILGAVLSSGGSFLQMRGYVSEKTGKALNWAGYGVMGASMLLFVLAGLWG
Ga0214471_100078662	3300033417	Soil	MELLLTKSVVVTLAILGAVLSSGGSFLQMRGYVSEKTGKALNWAGYGVMGASMLLFVLAGLWG
Ga0214471_107421242	3300033417	Soil	RGLPEARQPRLMELLLSRPVVVTLAVLGALLASAASLLQLRGYLNPTSARALNWAGYGCMGASMLLFALAGLWR
Ga0364925_0096184_392_583	3300034147	Sediment	MELLLTKPVVVTLAVIGAVLSTAASFLQTRGYVGEKTGKALNYAGYGVMGASMLLFVLAGLWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062537

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences