Metagenome / Metatranscriptome Family F062352

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062352
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	83 residues
Representative Sequence	MQPINRYSGPPPHATKWTVVVDRPREARTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAVVGTPETDSVA
Number of Associated Samples	54
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.15 %
% of genes near scaffold ends (potentially truncated)	31.54 %
% of genes from short scaffolds (< 2000 bps)	90.77 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (83.077 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (49.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (86.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.41% β-sheet: 12.61% Coil/Unstructured: 72.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF04352	ProQ	1.54
PF06078	DUF937	0.77
PF00226	DnaJ	0.77
PF07929	PRiA4_ORF3	0.77
PF05598	DUF772	0.77
PF13556	HTH_30	0.77
PF01965	DJ-1_PfpI	0.77
PF13592	HTH_33	0.77
PF03551	PadR	0.77
PF01939	NucS	0.77
PF09351	DUF1993	0.77
PF00873	ACR_tran	0.77
PF06441	EHN	0.77
PF00239	Resolvase	0.77
PF13505	OMP_b-brl	0.77
PF11026	DUF2721	0.77
PF00072	Response_reg	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	1.54
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.77
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.77
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.77
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.77
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.77
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.77
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.77
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
All Organisms	root	All Organisms	16.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
cellular organisms	root	All Organisms → cellular organisms	16.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.77 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Woeseiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.77 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
unclassified Woeseiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae	0.77 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.77 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.77 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	0.77 %
Ralstonia pickettii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.08 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	0.77 %
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	0.77 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.77 %
Ralstonia pickettii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10488670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005332\|Ga0066388_100494256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	1860	Open in IMG/M
3300005332\|Ga0066388_101636511	Not Available	1135	Open in IMG/M
3300005332\|Ga0066388_101929755	Not Available	1055	Open in IMG/M
3300005332\|Ga0066388_102131693	Not Available	1009	Open in IMG/M
3300005332\|Ga0066388_102193660	Not Available	996	Open in IMG/M
3300005363\|Ga0008090_15177552	Not Available	708	Open in IMG/M
3300005764\|Ga0066903_100005145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11267	Open in IMG/M
3300005764\|Ga0066903_101388398	Not Available	1319	Open in IMG/M
3300005764\|Ga0066903_105024849	Not Available	701	Open in IMG/M
3300005764\|Ga0066903_105351517	Not Available	678	Open in IMG/M
3300005764\|Ga0066903_106432327	Not Available	613	Open in IMG/M
3300005764\|Ga0066903_107920510	Not Available	545	Open in IMG/M
3300009792\|Ga0126374_10739989	Not Available	744	Open in IMG/M
3300009792\|Ga0126374_11641805	Not Available	532	Open in IMG/M
3300010043\|Ga0126380_11574329	Not Available	585	Open in IMG/M
3300010047\|Ga0126382_12061359	Not Available	545	Open in IMG/M
3300010048\|Ga0126373_10593499	Not Available	1159	Open in IMG/M
3300010048\|Ga0126373_10707705	Not Available	1066	Open in IMG/M
3300010048\|Ga0126373_10822330	Not Available	991	Open in IMG/M
3300010048\|Ga0126373_11679172	Not Available	699	Open in IMG/M
3300010048\|Ga0126373_13210614	Not Available	509	Open in IMG/M
3300010358\|Ga0126370_10341053	Not Available	1207	Open in IMG/M
3300010358\|Ga0126370_10934811	Not Available	786	Open in IMG/M
3300010358\|Ga0126370_12115998	Not Available	553	Open in IMG/M
3300010358\|Ga0126370_12268011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	536	Open in IMG/M
3300010359\|Ga0126376_10157406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	1829	Open in IMG/M
3300010359\|Ga0126376_11438801	Not Available	715	Open in IMG/M
3300010359\|Ga0126376_11551249	Not Available	693	Open in IMG/M
3300010359\|Ga0126376_12381401	Not Available	576	Open in IMG/M
3300010359\|Ga0126376_12843764	Not Available	534	Open in IMG/M
3300010360\|Ga0126372_10280394	Not Available	1451	Open in IMG/M
3300010360\|Ga0126372_12181647	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_12452488	Not Available	572	Open in IMG/M
3300010361\|Ga0126378_10334405	Not Available	1622	Open in IMG/M
3300010361\|Ga0126378_12691463	Not Available	568	Open in IMG/M
3300010366\|Ga0126379_12102272	Not Available	666	Open in IMG/M
3300010366\|Ga0126379_12322187	Not Available	636	Open in IMG/M
3300010366\|Ga0126379_13087743	Not Available	557	Open in IMG/M
3300010376\|Ga0126381_100363092	Not Available	2006	Open in IMG/M
3300010376\|Ga0126381_100588643	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300010376\|Ga0126381_100983577	Not Available	1217	Open in IMG/M
3300010376\|Ga0126381_101152782	Not Available	1120	Open in IMG/M
3300010376\|Ga0126381_101308893	Not Available	1047	Open in IMG/M
3300010376\|Ga0126381_101599613	Not Available	942	Open in IMG/M
3300010376\|Ga0126381_101786987	Not Available	887	Open in IMG/M
3300010376\|Ga0126381_103206101	Not Available	647	Open in IMG/M
3300010376\|Ga0126381_104959110	Not Available	511	Open in IMG/M
3300010398\|Ga0126383_10108743	All Organisms → cellular organisms → Bacteria → Proteobacteria	2497	Open in IMG/M
3300010937\|Ga0137776_1760873	Not Available	641	Open in IMG/M
3300012948\|Ga0126375_10749542	Not Available	767	Open in IMG/M
3300012971\|Ga0126369_10396149	Not Available	1417	Open in IMG/M
3300012971\|Ga0126369_12328939	Not Available	622	Open in IMG/M
3300012971\|Ga0126369_13618758	Not Available	506	Open in IMG/M
3300016294\|Ga0182041_10132672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1891	Open in IMG/M
3300016294\|Ga0182041_11340817	Not Available	655	Open in IMG/M
3300016294\|Ga0182041_11507282	Not Available	619	Open in IMG/M
3300016294\|Ga0182041_12288962	Not Available	505	Open in IMG/M
3300016319\|Ga0182033_10491082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300016319\|Ga0182033_11080744	Not Available	716	Open in IMG/M
3300016319\|Ga0182033_11201868	Not Available	679	Open in IMG/M
3300016341\|Ga0182035_10205976	Not Available	1559	Open in IMG/M
3300016341\|Ga0182035_10944651	Not Available	762	Open in IMG/M
3300016341\|Ga0182035_11315065	Not Available	647	Open in IMG/M
3300016341\|Ga0182035_11614693	Not Available	585	Open in IMG/M
3300016341\|Ga0182035_11631527	Not Available	582	Open in IMG/M
3300016357\|Ga0182032_11642530	Not Available	560	Open in IMG/M
3300016371\|Ga0182034_10074018	Not Available	2348	Open in IMG/M
3300016387\|Ga0182040_10225035	Not Available	1395	Open in IMG/M
3300016387\|Ga0182040_10618906	Not Available	878	Open in IMG/M
3300016387\|Ga0182040_11686325	Not Available	541	Open in IMG/M
3300016387\|Ga0182040_11784336	Not Available	526	Open in IMG/M
3300016404\|Ga0182037_10957179	Not Available	744	Open in IMG/M
3300016445\|Ga0182038_11385334	Not Available	630	Open in IMG/M
3300016445\|Ga0182038_11686598	Not Available	571	Open in IMG/M
3300017975\|Ga0187782_10446412	Not Available	986	Open in IMG/M
3300018058\|Ga0187766_10033355	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300018058\|Ga0187766_10088938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	1860	Open in IMG/M
3300018058\|Ga0187766_10423049	Not Available	885	Open in IMG/M
3300018060\|Ga0187765_10123903	Not Available	1434	Open in IMG/M
3300018060\|Ga0187765_10216145	Not Available	1114	Open in IMG/M
3300021560\|Ga0126371_10000986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23707	Open in IMG/M
3300021560\|Ga0126371_10022378	All Organisms → cellular organisms → Bacteria	5843	Open in IMG/M
3300021560\|Ga0126371_10139429	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300021560\|Ga0126371_10236991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1935	Open in IMG/M
3300021560\|Ga0126371_10722421	Not Available	1144	Open in IMG/M
3300021560\|Ga0126371_10860426	Not Available	1051	Open in IMG/M
3300021560\|Ga0126371_12058331	Not Available	687	Open in IMG/M
3300021560\|Ga0126371_12155116	Not Available	672	Open in IMG/M
3300021560\|Ga0126371_12990330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300021560\|Ga0126371_13015693	Not Available	570	Open in IMG/M
3300027874\|Ga0209465_10068463	Not Available	1719	Open in IMG/M
3300031573\|Ga0310915_10263148	Not Available	1215	Open in IMG/M
3300031573\|Ga0310915_10680527	Not Available	727	Open in IMG/M
3300031719\|Ga0306917_10846255	Not Available	717	Open in IMG/M
3300031744\|Ga0306918_10192198	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300031744\|Ga0306918_11025407	Not Available	641	Open in IMG/M
3300031747\|Ga0318502_10105580	Not Available	1567	Open in IMG/M
3300031771\|Ga0318546_10547811	Not Available	813	Open in IMG/M
3300031798\|Ga0318523_10296532	Not Available	807	Open in IMG/M
3300031833\|Ga0310917_10073119	Not Available	2156	Open in IMG/M
3300031833\|Ga0310917_11138817	Not Available	520	Open in IMG/M
3300031879\|Ga0306919_11133370	Not Available	596	Open in IMG/M
3300031890\|Ga0306925_10592924	Not Available	1171	Open in IMG/M
3300031890\|Ga0306925_10983530	Not Available	862	Open in IMG/M
3300031890\|Ga0306925_11411450	Not Available	686	Open in IMG/M
3300031897\|Ga0318520_10357893	Not Available	887	Open in IMG/M
3300031910\|Ga0306923_12504570	Not Available	509	Open in IMG/M
3300031912\|Ga0306921_10234572	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300031912\|Ga0306921_11382799	Not Available	775	Open in IMG/M
3300031912\|Ga0306921_12231581	Not Available	576	Open in IMG/M
3300031941\|Ga0310912_10231296	All Organisms → cellular organisms → Bacteria → Proteobacteria	1419	Open in IMG/M
3300031945\|Ga0310913_10896594	Not Available	624	Open in IMG/M
3300031946\|Ga0310910_10068849	Not Available	2550	Open in IMG/M
3300031946\|Ga0310910_11019044	Not Available	647	Open in IMG/M
3300031947\|Ga0310909_10133221	Not Available	2029	Open in IMG/M
3300031947\|Ga0310909_10498844	Not Available	1021	Open in IMG/M
3300031954\|Ga0306926_10917315	Not Available	1048	Open in IMG/M
3300031954\|Ga0306926_11817565	Not Available	691	Open in IMG/M
3300031954\|Ga0306926_12738361	Not Available	534	Open in IMG/M
3300032001\|Ga0306922_10448490	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300032001\|Ga0306922_10595649	Not Available	1172	Open in IMG/M
3300032001\|Ga0306922_11033616	Not Available	846	Open in IMG/M
3300032001\|Ga0306922_11757805	Not Available	612	Open in IMG/M
3300032064\|Ga0318510_10392693	Not Available	590	Open in IMG/M
3300032076\|Ga0306924_11387979	Not Available	750	Open in IMG/M
3300032261\|Ga0306920_102249085	Not Available	757	Open in IMG/M
3300032261\|Ga0306920_102932171	Not Available	646	Open in IMG/M
3300033158\|Ga0335077_11190043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300033290\|Ga0318519_10304522	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.23%
Aquatic	Environmental → Aquatic	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.85%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.38%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.38%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.77%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.77%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	38.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.62%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.77%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_104886702	3300004633	Tropical Forest Soil	MLPIDLLSGPPAHDTKWTVVVYRPRAARTPSLFDTQAEANAEIIRLRERGVAHVFALAPVATRDDRPPVAAAVVGTPRPDP
Ga0066388_1004942562	3300005332	Tropical Forest Soil	MQPINRYSGPPPHATKWTVVVDRPRETRTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGHGLAVAAAVVETLETDSLA*
Ga0066388_1016365111	3300005332	Tropical Forest Soil	MPPINLFCGSPAHATKWTLVVDPPREARRLTLFDTQAEVYAEIIRLRERGVAHLFALAPVATCGDRPAVAAVVVGTPDTGSVA*
Ga0066388_1019297552	3300005332	Tropical Forest Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPV*
Ga0066388_1021316933	3300005332	Tropical Forest Soil	HATKWTVVVDRPREARTLTLFDTQADVHAEIVRLRERGVAHVFALAPVAACGDRPAVAAAVVGTPRPDSAREE*
Ga0066388_1021936602	3300005332	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEIHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTGLSL*
Ga0008090_151775521	3300005363	Tropical Rainforest Soil	MRGNMLPIDLLSGPPAHDTKWTVVVYRPRAARTPSLFDTQGEANAEIIRLRERGVAHVFALAPVATRDDRPPVAAAVVGTPRP
Ga0066903_10000514511	3300005764	Tropical Forest Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTLAEVHAEIIRLRERGVAHVFALAPVRVCGERPAVAAAVVGTPDTDSVRED*
Ga0066903_1013883982	3300005764	Tropical Forest Soil	MLPINRYCGPPAHATKWTVVVDPPREVRTLTPFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDRPAVTAAVVGAPDTDFRA*
Ga0066903_1050248492	3300005764	Tropical Forest Soil	MPPINLFCGPPAHATKWTLVVDPPREARRLTLFDTQAEVHAEIIRLRERGVAHVFALAPIAACGDRPAVAAVVVGTLDTDSVA*
Ga0066903_1053515171	3300005764	Tropical Forest Soil	TKWTVVVDRPREARTLLLFDSQAEAHAEIVRLRERGVAHVFALAPVVACSDRPAVAAAALEHPQSRED*
Ga0066903_1064323272	3300005764	Tropical Forest Soil	MLQINLFGEPPSHATKWTIVIDSPRELRRLMLFDTQAEVHAEIIRLRERGVAHVFALAPVAARGDRLATAAAVVGTPGWNARH*
Ga0066903_1079205102	3300005764	Tropical Forest Soil	MPPINLFCGSPAHATKWTLVVDPPREARRLTLFDTQAEVYAEIIRLRERGVAHLFALAPVATCGDRPAVAAVVVGT
Ga0126374_107399891	3300009792	Tropical Forest Soil	GGNMRPINRPSAHATKWTLVVDRPREPCTLTLFDTQAEVQAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTVDTGLSV*
Ga0126374_116418051	3300009792	Tropical Forest Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTLAEVHAEIIRLRERGVAHVFALAPVRVCGERPAVAAAVVGTPDTDSVLG*
Ga0126380_115743291	3300010043	Tropical Forest Soil	MPPINRYCGPPAHATKWTIVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALPPVGPCGRGLVGTPDPDSARATKQSRPASEWAVRLPRHHDPT*
Ga0126382_120613591	3300010047	Tropical Forest Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVHAEIIRLRERGVAHVFALAPVVACSDRPAVAVAALEHLQSREG*
Ga0126373_105934992	3300010048	Tropical Forest Soil	MPPINVFCALPAHATKWTLVVDPPREARKLTLFDTQAEVHAEIIRLRERGAAHVFALAPVRACGDRPAVTAAVVGTLDTDSVPD*
Ga0126373_107077051	3300010048	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVQAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTVDTGLSV*
Ga0126373_108223302	3300010048	Tropical Forest Soil	MLPINRYCGPPAHATKWTVVVDPPREVRTLTPFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDRPAVTAAVVGAPDTDSVRD*
Ga0126373_116791721	3300010048	Tropical Forest Soil	MQPINRYCGPPAHAKKWTLVVDRPREARTVTLFATRAEVHAKIIRLRERGVAHVFALAPARGRGDRLTVVAAAVVGTPDTDSVA*
Ga0126373_132106142	3300010048	Tropical Forest Soil	PHATKWTVVVDRPREARTLTLFDTQAEAHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAVIRTPETDSVA*
Ga0126370_103410532	3300010358	Tropical Forest Soil	MPSINVFYGLPAHATKWTLVVDPPREARRLTLFDTQAEVHAEIIRLRERGAAHVFALAPVRACGDRQAVTAAVVGTLDTDSVRD*
Ga0126370_109348111	3300010358	Tropical Forest Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVPAAVVGTPDP
Ga0126370_121159981	3300010358	Tropical Forest Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALAPVRICGDRPAVAAAVVGTSDTDSVRED*
Ga0126370_122680112	3300010358	Tropical Forest Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVHAEIIRLRERGVAHVFALAPLASCGDRPTVATAVVGTPDPDSARADLARLVAARSPA*
Ga0126376_101574061	3300010359	Tropical Forest Soil	MLPIDLLSGPPAHDTKWTVVVYRPRAARTPSLFDTQAEANAEIIRLRERGVAHVFALAPVATRDDRPPVAAAVVGTPRPDSAREE*
Ga0126376_114388011	3300010359	Tropical Forest Soil	PHATKWTVVVDRPRETRTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGHGLAVAAAVVETLETDSLA*
Ga0126376_115512492	3300010359	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVQAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTGLSVCG*
Ga0126376_123814011	3300010359	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLMLFDTQAEVHAEIIRLRERGVAHVFAVAPMAACGDRPVAAAVVGTADTDSVCEDEGPLPALPLQRPQSLTSS*
Ga0126376_128437642	3300010359	Tropical Forest Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALAPVRICGDRPAV
Ga0126372_102803942	3300010360	Tropical Forest Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVHAEIIRLRERGVAHVFALAPIRVCGDQPAVAAAAVGTPDTDSVRED*
Ga0126372_121816471	3300010360	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVQAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTGLSV*
Ga0126372_124524881	3300010360	Tropical Forest Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQVTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPA*
Ga0126378_103344051	3300010361	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLMLFDTQAEVHAEIIRLRERGVAHVFAVAPMAACGDRPVAAAVVGTADTDSVCEDEAH*
Ga0126378_126914631	3300010361	Tropical Forest Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVQAEIIRLRERGVAHVFALAPLAGDRPTVAALRDPT
Ga0126379_121022721	3300010366	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEIHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTVDTGLSV*
Ga0126379_123221872	3300010366	Tropical Forest Soil	DGSPTLRSNMPPINLFRGPPAHATKWTLVVDPPREARRLTLFDTQAEVHAEIIRLRERGAAHVFALAPVRACGDRPAVTAAVVGTLDTDSVPD*
Ga0126379_130877431	3300010366	Tropical Forest Soil	MPPINLFCGSPAHATKWTLVVDPPREARRLTLFDTQAEVHAEIIRLRERGVAHLFALAPVATCGDRPAVAAVVVGTPDTDSVA*
Ga0126381_1003630921	3300010376	Tropical Forest Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVPAAVVGTPDPDSARADFARLVAAPSPA*
Ga0126381_1005886431	3300010376	Tropical Forest Soil	MQPINRYSGPPPHATKWTVVVDRPREARTLTLLDTQAEAHAEIIRLRERGVAHVFALAPVAACGDGLAFAAAVVGTAETDSVA*
Ga0126381_1009835771	3300010376	Tropical Forest Soil	MPPINLFCGLPAHATKWTLVVDPPREARKLTLFDTQAEVHAEIIRLRERGAAHVFALAPVRACGDRPAVTAAVVGTLDTDSVLD*
Ga0126381_1011527821	3300010376	Tropical Forest Soil	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDTRAEVHAEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPPQSPQSREY*
Ga0126381_1013088931	3300010376	Tropical Forest Soil	PSDQRAGGNMRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVHAEIIRLRERGVAHVFAVAPVAARGDRPIAAAVVGTADTDLVCEDEAH*
Ga0126381_1015996131	3300010376	Tropical Forest Soil	MLPINRYCGPPAHATKWTVVVDPPREVRTLTLFDSQAEVHAEIIRLRERGVAHVFALAPVRACGDRPAVTAAVVGAPDTDSVRD*
Ga0126381_1017869872	3300010376	Tropical Forest Soil	MPPINLFCGPPAHATKWTLVVDPPREARRLTLFDTQAEVHEEIIRLRERGVAHVFALAPVAACGDRPAVAAVVVGTPDTDSVA*
Ga0126381_1032061011	3300010376	Tropical Forest Soil	LSASGASDEWTVVVDRPREARALTLFDTQAEVHAEIIRLRECGVAHVFALAPLAACGDRPTVAALRDPTDMGENEAVGPGSP
Ga0126381_1049591102	3300010376	Tropical Forest Soil	MQLINRYSGPPPHATKWTVVVDRPRETRTLTLFDTQADVHAEIVRLRERGVAHVFALAPVAACGDRPAV
Ga0126383_101087433	3300010398	Tropical Forest Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALAPVRVCGERPAVAAAVVGTPDTDSVRED*
Ga0137776_17608731	3300010937	Sediment	MQPINRFCGPPVHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPLQSRED*
Ga0126375_107495421	3300012948	Tropical Forest Soil	SVHATKWTLVVDRPQEPRTLTLFDTQAEVHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTGLSV*
Ga0126369_103961493	3300012971	Tropical Forest Soil	MPPINRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPPVAAAALEPPQSPQSREY*
Ga0126369_123289391	3300012971	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVHAEIIRLRERGVAHVFAVAPVAARGDRPIAAAVVGTADTDLVCEDEAH*
Ga0126369_136187581	3300012971	Tropical Forest Soil	FGEPPAHGTKWTVVVDRPRTARQVTLFDTRDEAHAEIIRLRGRGVAHVFALAPLATCGDRPTVAAAVVGTPDPDSARADFARLVAAPSPV*
Ga0182041_101326721	3300016294	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLVLFDTQAEVHAEIIRLRERGVAHVFALAPVADCSGRLAVAAAVGGMPGTESMT
Ga0182041_113408171	3300016294	Soil	MQPINRFCGPPAHATKWTVVVDRPREARTLLLFDSQAEAHAEIVRLRERGVGHVFACSDRPAVAAAALEHPQSRED
Ga0182041_115072821	3300016294	Soil	NMPPINRYCGPAAHATKWTVVIDRPREARTLTLFDTQAEVHAEIIRLREGGVAHVFALAPVAACGDRLAVAAAAVGAPDTDSGA
Ga0182041_122889621	3300016294	Soil	MQPINRYSGPPPHATKWTVVVDRPREARTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAVVGTPETDSVA
Ga0182033_104910822	3300016319	Soil	WTRSMHPINRYSGPPPHATKWTVVVDRPREARTLTLFDTQAEAHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAAVGAPDTDSGA
Ga0182033_110807441	3300016319	Soil	MLQINLFGQPPSHATKWTIVVDSPRELRRLMLFDTQAEVHAEIIRLRESGVAHVFALAPVAARGDRLAAAAAVVGTPGWSARH
Ga0182033_112018683	3300016319	Soil	MPPINRYCGPPAHATKWTVVVDPPREVRTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDRPAVTVAVVGAAQH
Ga0182035_102059761	3300016341	Soil	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDSQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAVAALEHPQSREG
Ga0182035_109446511	3300016341	Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALAPIRVCGDQPAVAAAAVGTPDTDSV
Ga0182035_113150652	3300016341	Soil	MRAINRPPAHATKWTLVVDRPREPRTLTLFDTQAEIHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTDLVCEDEAH
Ga0182035_116146931	3300016341	Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPT
Ga0182035_116315271	3300016341	Soil	MPPINLFCGPPAHATKWTLVVDPPREARRLTLFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDQPAVTAAVVGTLDADSVRD
Ga0182032_116425302	3300016357	Soil	MPPINLFCGPPAHATKWTLVVDPPREARRLALFATQAEVLAEIIRLRERGVAHVFALAPVAACCDPPAVAAALVGMPETGSVA
Ga0182034_100740181	3300016371	Soil	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLCERGVAHVFALAPVVACSDRPAVAAAALEPPQSPQSREY
Ga0182040_102250352	3300016387	Soil	MQPVNRYCRPPAHPTKWTVVADRPREARALTLFDTQAEVHAEIIRLRERGVAHVFAVAPVAASGDRPVAAA
Ga0182040_106189061	3300016387	Soil	MPPINRYCGPPAHATKWTVVIDRPREARTLTLFDTQAEVHAEIIRLREGGVAHVFALAPVAACGDRLAVAAAAVGAPDT
Ga0182040_116863251	3300016387	Soil	MPHINRFGEPPAHGTKWTVVVDRPRTARQVTLFDTRDEAHAEIIRLRGRGVAHVFALAPLAACDDRPTVAAAVVG
Ga0182040_117843361	3300016387	Soil	MQPINRYCGPPAHATKWTVVIDRPPEARTLTLFDTQAEVHAEIIRLRERGVAHVFAVAPIAACGERLAVAAAVVGTPETDSVA
Ga0182037_109571791	3300016404	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLMLFDTQAEVHAEIIRLRESGVAHVFALAPVAARGDRLAAAAAVVGTPGWSARH
Ga0182038_113853341	3300016445	Soil	MPPINLFCGPPAHATKWTLVLDPPREARRLALFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDQPAVTAAVVGTLDTDSVRD
Ga0182038_116865981	3300016445	Soil	MPPINRYCGPPAHATKWTIVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALAPIRVCGDQPAVAAAAVGTPDTDSVRED
Ga0187782_104464121	3300017975	Tropical Peatland	MPPINRYCGPPAHATKWTVVIDRPREARSLTLFDTQAEVHAEIIRLREGGVAHVFAVAPVAACGNRLAVAA
Ga0187766_100333554	3300018058	Tropical Peatland	MQPVNRYCVPPAHATKWTVVIDRPREGRTLTLFDTQVEVHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAVVGTPDADSVA
Ga0187766_100889382	3300018058	Tropical Peatland	MQPINRYSGPPPHATKWTVVVDRPREARRLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGDRHAVAAAVVGTPETDSVA
Ga0187766_104230491	3300018058	Tropical Peatland	MQRVNRYCRPPAHPTKWTVVVDRPREVRALTLFDTQAEVDAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADLARLVTARSQHSSAD
Ga0187765_101239031	3300018060	Tropical Peatland	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPPQSPQSREY
Ga0187765_102161452	3300018060	Tropical Peatland	MPPINRYCGPPAHATKWTVVIDRPREARTLTLFDTQAEVHAEIIRLREGGVAHVFALAPVAACGDRLAVAAAAVGAPDTDSGA
Ga0126371_100009864	3300021560	Tropical Forest Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTLAEVHAEIIRLRERGVAHVFALAPVRVCGERPAVAAAVVGTPDTDSVRED
Ga0126371_100223783	3300021560	Tropical Forest Soil	MQPINRYSGPPPHATKWTVVVDRPRETRTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGHGLAVAAAVVETLETDSLA
Ga0126371_101394291	3300021560	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEIHAEIIRLRERGVAHVFAVAPVAACGDRPVAAA
Ga0126371_102369913	3300021560	Tropical Forest Soil	MLRINLFGEPPSHATKWTIVVDSPRELRRLVLFDTQAEVHAEIIRLRERGVAHVFSLAPVAARGDRLAVAAAVVGTPDTDSMA
Ga0126371_107224212	3300021560	Tropical Forest Soil	MPPINVFCALPAHATKWTLVVDPPREARKLTLFDTQAEVHAEIIRLRERGAAHVFALAPVRACGDRPAVTAAVVGTLDTDSVLD
Ga0126371_108604261	3300021560	Tropical Forest Soil	MQLINRFCGPRAHATKWTVVVDRPREARTLLLFDSQAEAHAEIVRLRERGVAHVFALAPVVACSDRPAVAAAALEHPQSRED
Ga0126371_120583312	3300021560	Tropical Forest Soil	MPSINVFYGLPAHATKWALVVDPPREARRLTLFDTEAEVHAEIIRLRERGAAHVFALAPVRACGDRQAVTAAVVGTLDTDSVRD
Ga0126371_121551161	3300021560	Tropical Forest Soil	MQPINRFCGPSAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPPQSREY
Ga0126371_129903302	3300021560	Tropical Forest Soil	MPQINLFGELPSHATKWTIVVDSPRELRRLMLFDTQAEVHAEIIRLRERGVAHVFALAPVAARGDRLA
Ga0126371_130156932	3300021560	Tropical Forest Soil	MLPINRYCGPPAHATKWTVVVDPPREVRTLTPFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDRPAVTAAVVGAPDTDSVRD
Ga0209465_100684634	3300027874	Tropical Forest Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEIHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTVDTGLSV
Ga0310915_102631483	3300031573	Soil	MQPINRYSGPPPHATKWTVVVDRPRETRTLTLFDTLAEVHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAVVGTPETDSVA
Ga0310915_106805271	3300031573	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLMLFDTQAEVHAEIIRLRERGVAHVFALAPVAAGGDRLAVAAAVVGTPGWNAQH
Ga0306917_108462551	3300031719	Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQVTLFDTRDEAHAEIIRLRGRGVAHVFALAPLAACGDRPTVAAAVVGTPDSDSARADFARLVAAPSPA
Ga0306918_101921983	3300031744	Soil	LRSRGDEEATCSQSIDATKWTLVVDRPREARTLLLFDSQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAVAALEPPQSPQSREY
Ga0306918_110254071	3300031744	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLVLLDTQAEVHAEIIRLRERGVAHVFSLAPVAARGDRLAVAAAVVGTPGWNARH
Ga0318502_101055801	3300031747	Soil	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHMFALAPVVACSDRPPVAAAALEPPQSPQSREY
Ga0318546_105478111	3300031771	Soil	MLSINLFSGPPAHGTKWTVVVDRPRAARTLTLFDTQAEANAEIIRLRERGVAHVFALAPIAPSGDRPPVATAVVGTPRPD
Ga0318523_102965322	3300031798	Soil	MLHINRFGEPPAHGTKWMVVVDRPRTARQVTLFDTRDEAHAEIIRLRGRGVAHVFALAPLAACGDRPTVAAAVVGTPDSDSARADFARLVAAPSPA
Ga0310917_100731191	3300031833	Soil	NRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPPQSPQSREY
Ga0310917_111388171	3300031833	Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTGLSL
Ga0306919_111333701	3300031879	Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAAVGTPDPDSARADFARLLAAPSPA
Ga0306925_105929241	3300031890	Soil	MPPINLFCGPPAHATKWTLVLDPPREARRLALFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDQPAVTAAVVGTLDADSVRD
Ga0306925_109835302	3300031890	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLVLFDTQAEVHAEIIRLRERGVAHVFSLAPVAARGDRLAVAAAVVGTPDTDSMA
Ga0306925_114114501	3300031890	Soil	MPHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPA
Ga0318520_103578932	3300031897	Soil	MLHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPA
Ga0306923_125045701	3300031910	Soil	MPPINRYCGPPAHATKWTVVIDRPREARTLTLFDTQAEVHAEIIRLREGGVAHVFALAPVAACGDRLAVAAAVIRTPETDSVA
Ga0306921_102345722	3300031912	Soil	MPPINLFCGPPAHATKWTLVVDPPREARRLTLFDTQAEVHEEIIRLRERGVAHVFALAPVAACGDRPAVAAVVVGTPDTDSVA
Ga0306921_113827991	3300031912	Soil	RMLRSNMPPINLFCGPPAHATKWTLVLDPPREARRLALFDTQAEVHAEIIRLRERGVAHVFALAPVRACGDQPAVTAAVVGTLDTDSVRD
Ga0306921_122315811	3300031912	Soil	MLSINLFSGPPAHGTKWTVVVDRPRAARTLTLFDTQAEANAEIIRLRERGVAHVFALAPIAPSGDRPPVATAVVRTPRPDPARAEVT
Ga0310912_102312962	3300031941	Soil	MQPINRYSGPPPHATKWTVVVDRPREARTLTLFDTQAEAHAEIIRLRERGVAHVFALAPVAACGDRLAVAAAVIRTPETDSVA
Ga0310913_108965941	3300031945	Soil	MPHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRGRGEAHVFALAPLAACGDRPTVAAAVVGTPDSDSARADFARLVAAPSPA
Ga0310910_100688493	3300031946	Soil	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVRVEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPPQSPHSREY
Ga0310910_110190442	3300031946	Soil	HGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPA
Ga0310909_101332211	3300031947	Soil	NRFCGPPAHATKWTLVVDRPREARALLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVAAAALEPPQSPQSREY
Ga0310909_104988442	3300031947	Soil	MPHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADF
Ga0306926_109173152	3300031954	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLMLFDTQAEVHAEIIRLRERGVAHVFALAPVAAGGDRLAVAAAVVGTPGWNARH
Ga0306926_118175651	3300031954	Soil	MQPINRYSGPPPHATKWTVVVDRPRETRTLTLFDTQAEVHAEIIRLRERGVAHVFALAPVAACGHGLAVAAAVVETFETDSLA
Ga0306926_127383611	3300031954	Soil	MPPINRYCGPPAHATKWTVVIDRPREARTLTLFDTQAEVHAEIIRLREGGVAHVFALAPVAACGDRLAVAAAA
Ga0306922_104484901	3300032001	Soil	MLQINLFGEPPSHATKWTIVVDSPRELRRLVLLDTQAEVHAEIIRLRERGVAHVFSLAPVAARGDRLAVAAAVVGTPDTDSMA
Ga0306922_105956491	3300032001	Soil	MRPINRPSAHATKWTLVVDRPREPRTLTLFDTQAEVHAEIIRLRERGVAHVFAVAPVAACGDRPVAAAVVGTADTGLSV
Ga0306922_110336161	3300032001	Soil	MPHINRFGEPPAHGTKWTVVVDRPRTARQLTLFDTRDEAHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPT
Ga0306922_117578052	3300032001	Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVDAEIIRLRERGVAHVFALAPLAACGDRPTVAALRDSTDMGENEA
Ga0318510_103926931	3300032064	Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVHAEIIRLRERGVAHVFALAPLAACGDRPTVAAAVVGTPDPDSARADFARLVAAPSPA
Ga0306924_113879791	3300032076	Soil	MQPVNRYCRPPAHPTKWTVVVDRPREARALTLFDTQAEVQAEIIRLRERGVAHVFALAPLAGDRPTVAALRDPTDMGENEAV
Ga0306920_1022490852	3300032261	Soil	MPPINRYCGPPAHATKWTVVVDPPREARKLTLFDTQAEVHAEIIRLRERGVAHVFALAPVRVCGERPAVAAAVVGTPDTDSVRD
Ga0306920_1029321711	3300032261	Soil	LQINLFGEPPSHATKWTIVVDSPRELRRLMLFDTQAEVHAEIIRLRERGVAHVFALAPVAAGGDRLAVAAAVVGTPGWNAQH
Ga0335077_111900432	3300033158	Soil	MLQINLFGEPPTHATKWTVVVDSPRELRRLMLFDTQAEVHAEIIRLRERGVAHVFALAPVADCSGRLAVAAAVVGMPGTESMT
Ga0318519_103045221	3300033290	Soil	MQPINRFCGPPAHATKWTLVVDRPREARTLLLFDTQAEVHVEIIRLRERGVAHVFALAPVVACSDRPAVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062352

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences