Metagenome / Metatranscriptome Family F062288

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062288
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	49 residues
Representative Sequence	DADAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGT
Number of Associated Samples	115
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.137 % of family members)
Environment Ontology (ENVO)	Unclassified (25.954 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.359 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13560	HTH_31	48.09
PF12844	HTH_19	2.29
PF03109	ABC1	1.53
PF02371	Transposase_20	0.76
PF13424	TPR_12	0.76
PF07291	MauE	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	1.53
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.71 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.71 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.71 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.21 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.21 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	71.76 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	70.99 %
Unclassified	root	N/A	2.29 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	70.99 %
Unclassified	root	N/A	2.29 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig29777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1045962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300000880\|AL20A1W_1070370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300001361\|A30PFW6_1028595	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300002557\|JGI25381J37097_1063618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300002568\|C688J35102_118978780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300003911\|JGI25405J52794_10100908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300004006\|Ga0055453_10124071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300004643\|Ga0062591_100518073	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005093\|Ga0062594_103042150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005147\|Ga0066821_1023505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300005163\|Ga0066823_10100763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005174\|Ga0066680_10530415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300005175\|Ga0066673_10658452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300005186\|Ga0066676_10139906	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300005336\|Ga0070680_100457217	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005355\|Ga0070671_101047935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005367\|Ga0070667_101283361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300005441\|Ga0070700_100297310	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300005555\|Ga0066692_10058542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2168	Open in IMG/M
3300005555\|Ga0066692_10650507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005558\|Ga0066698_10812028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300005564\|Ga0070664_100631502	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005569\|Ga0066705_10130214	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005587\|Ga0066654_10678748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300005718\|Ga0068866_10879825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300006032\|Ga0066696_10812146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300006034\|Ga0066656_10991676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300006042\|Ga0075368_10369044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300006046\|Ga0066652_100836811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300006046\|Ga0066652_101360956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300006049\|Ga0075417_10035937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2078	Open in IMG/M
3300006196\|Ga0075422_10316785	Not Available	672	Open in IMG/M
3300006573\|Ga0074055_11852380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300006755\|Ga0079222_10140991	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300006806\|Ga0079220_10713729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300006806\|Ga0079220_11055169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300006854\|Ga0075425_101990148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300006880\|Ga0075429_100132151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2184	Open in IMG/M
3300006903\|Ga0075426_10809388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300006903\|Ga0075426_11240126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300006904\|Ga0075424_101712203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300009093\|Ga0105240_12314089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300009147\|Ga0114129_11173953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300009148\|Ga0105243_11654996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300009156\|Ga0111538_10376051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1798	Open in IMG/M
3300009545\|Ga0105237_11081013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300009840\|Ga0126313_10661444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300010038\|Ga0126315_10042564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2428	Open in IMG/M
3300010038\|Ga0126315_10721598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300010039\|Ga0126309_10083735	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300010039\|Ga0126309_10105709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1456	Open in IMG/M
3300010154\|Ga0127503_10156357	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300010301\|Ga0134070_10284496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300010336\|Ga0134071_10294236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300010337\|Ga0134062_10159394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300010396\|Ga0134126_10410786	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300010999\|Ga0138505_100016720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300011000\|Ga0138513_100017977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300012201\|Ga0137365_10388859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300012201\|Ga0137365_11143053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012400\|Ga0134048_1134909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012507\|Ga0157342_1017428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300012517\|Ga0157354_1017165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300012532\|Ga0137373_10032448	All Organisms → cellular organisms → Bacteria	5052	Open in IMG/M
3300012905\|Ga0157296_10202648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300012908\|Ga0157286_10003275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2691	Open in IMG/M
3300012910\|Ga0157308_10094182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300012915\|Ga0157302_10555720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300012951\|Ga0164300_10031772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1945	Open in IMG/M
3300012951\|Ga0164300_10571130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300012955\|Ga0164298_10729058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300012955\|Ga0164298_10936372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300012958\|Ga0164299_10634880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300012977\|Ga0134087_10311164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300012977\|Ga0134087_10696585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012986\|Ga0164304_10924299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300012986\|Ga0164304_11668127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300013306\|Ga0163162_10124182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2687	Open in IMG/M
3300013763\|Ga0120179_1003310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4835	Open in IMG/M
3300014056\|Ga0120125_1178274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300014157\|Ga0134078_10254920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300014157\|Ga0134078_10260915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300014157\|Ga0134078_10339373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300014326\|Ga0157380_10096190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2455	Open in IMG/M
3300015357\|Ga0134072_10343100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300017944\|Ga0187786_10321870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300018027\|Ga0184605_10088453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1357	Open in IMG/M
3300018032\|Ga0187788_10071421	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300018071\|Ga0184618_10300499	Not Available	683	Open in IMG/M
3300018433\|Ga0066667_10838338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300018433\|Ga0066667_12256894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300018482\|Ga0066669_11512910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300019361\|Ga0173482_10250549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300019362\|Ga0173479_10151253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300020002\|Ga0193730_1162722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300021344\|Ga0193719_10363544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300022756\|Ga0222622_10164588	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300022889\|Ga0247785_1013177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300024219\|Ga0247665_1024701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300024224\|Ga0247673_1012349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1104	Open in IMG/M
3300024245\|Ga0247677_1035884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300025893\|Ga0207682_10565456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300025910\|Ga0207684_10527396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300025917\|Ga0207660_10243017	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300025936\|Ga0207670_11210340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300025961\|Ga0207712_10245814	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300026078\|Ga0207702_10646836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300026142\|Ga0207698_11753187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300026330\|Ga0209473_1235986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300026528\|Ga0209378_1085124	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300027775\|Ga0209177_10334204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300027873\|Ga0209814_10020618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2670	Open in IMG/M
3300028065\|Ga0247685_1001729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3090	Open in IMG/M
3300028711\|Ga0307293_10172083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300028713\|Ga0307303_10018173	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300028713\|Ga0307303_10134678	Not Available	585	Open in IMG/M
3300028720\|Ga0307317_10111657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300028744\|Ga0307318_10191539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300028744\|Ga0307318_10336366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300028755\|Ga0307316_10156945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300028810\|Ga0307294_10046307	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300028876\|Ga0307286_10203261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300028884\|Ga0307308_10345997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300028885\|Ga0307304_10031160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1879	Open in IMG/M
3300028889\|Ga0247827_11064747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300031152\|Ga0307501_10097666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300031200\|Ga0307496_10057594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300032126\|Ga0307415_102333403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300033158\|Ga0335077_11340666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300033475\|Ga0310811_10279331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1946	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.39%
Host-Associated	Host-Associated	20.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.57%
Plants	Host-Associated → Plants	20.61%
Aquatic	Environmental → Aquatic	3.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%
Sediment	Environmental → Aquatic → Sediment	2.29%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.53%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Marine	Environmental → Aquatic → Marine	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.21%
Loam	Environmental → Terrestrial → Soil → Loam	5.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.29%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.29%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.05%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.53%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00607070	2166559006	Grass Soil	RAQAGGGIVADRDADAEAWIFISLGLLSTIDRRLGNLVGEQFDDIVASRRAWMTST
AP72_2010_repI_A100DRAFT_10459621	3300000837	Forest Soil	WIFISLGLLSTIDHRLGNIVGDEFEAIVASRREWMTGVSS*
AL20A1W_10703702	3300000880	Permafrost	AEAWIFISVGLLSTIDRRLSGLVGDDFERIIASRRTWMTGR*
A30PFW6_10285951	3300001361	Permafrost	VIRRAQKAGGIVPERDADAEAWIFISVGLLSTIDRRLSGLVGDDFDRIIASRRTWMTGR*
JGI25381J37097_10636181	3300002557	Grasslands Soil	EQGGILPSRDAEAEAWIFISLGLLSTIDHRLGSLVGEEFDDIIASRREWMTGKAG*
C688J35102_1189787801	3300002568	Soil	IRRSQEAGGIRPERDPDAEAWIFISLGLLSTIDHRLGNIVGEDFADIVDSRREWMTGSSA
JGI25405J52794_101009081	3300003911	Tabebuia Heterophylla Rhizosphere	AWIFISLGLLTTIDRRLGNLVGDELEDIFTSRRAWMTGAA*
Ga0055453_101240711	3300004006	Natural And Restored Wetlands	ADVIRRAQAKGGIVADRDPDAEAWIFISLGLLSTIDRRLGNLVGDEFDRIVDSRRAWMTGA*
Ga0062591_1005180731	3300004643	Soil	DAEAWIFISLGLLSTIDRRLNGLVGDEFDRIRDSRRAWMTGKTA*
Ga0062594_1030421501	3300005093	Soil	LEGRDADAEAWIFISLGLLSTIDHRLGSIVGDEFDDIVASRREWMTGHAD*
Ga0066821_10235051	3300005147	Soil	GIVAERDPDAEAWIFISLGLLSTIDRRLGNLVGEEFDDIVASRRAWMTGV*
Ga0066823_101007631	3300005163	Soil	VAEVIRGAQAAGGIVAERDADAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGV*
Ga0066680_105304152	3300005174	Soil	RAQEAGGVLPGRDPDAEAWIFISLGLLSTIDHRLGNLVGDDFEDIVASRRAWMTGRTP*
Ga0066673_106584521	3300005175	Soil	AGGIKRDRDPDAEAWIFISLGLLSTIDRRLGTLGEHDFEGVFASRRRWMVGESAA*
Ga0066676_101399061	3300005186	Soil	RNADAEAWIFISLGLLSTIDRRLGTVGDHDFEGVFASRRRWMTGADPA*
Ga0070680_1004572171	3300005336	Corn Rhizosphere	GGIVEERDADAEAWIFISLGLLSTIDRRLGNLVGEEFDDIVASRRAWMTGT*
Ga0070671_1010479351	3300005355	Switchgrass Rhizosphere	QEAGGVIAERDPDAEAWIFISLGLLTTIDRRLGNLVGDELEAIFASRRAWMSGTSA*
Ga0070667_1012833611	3300005367	Switchgrass Rhizosphere	RAQAAGGIVSDRDPDAEAWIFLSLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGA*
Ga0070700_1002973101	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VMRRSQEAGGVLPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRIIASRRAWMTGKTA*
Ga0066692_100585423	3300005555	Soil	RDAGAEAWIFISLGLLSTIDRRLGTVGDRDFEGVFASRRRWMLGENRA*
Ga0066692_106505072	3300005555	Soil	RDAGAEAWIFISLGLLSTIDRRLGTVGDRDFEGVFASRRRWMLGENGA*
Ga0066698_108120281	3300005558	Soil	ISRAQAAGGIVRERDPDAEAWIFISLGLLSTIDNRLGSLVGDEFDDIIASRRAWMTGKTA
Ga0070664_1006315022	3300005564	Corn Rhizosphere	IFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGA*
Ga0066705_101302142	3300005569	Soil	IKRDRDPDAEAWIFISLGLLSTIDRRLGTLGEHDFEGVFASRRRWMVGESAA*
Ga0066654_106787481	3300005587	Soil	GGIVEDRDPDAEAWIFISLGLLSTIDRRLGTVGDHDFEGVFTSRRLWMTGGVRPDSE*
Ga0068866_108798252	3300005718	Miscanthus Rhizosphere	FISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGTTS*
Ga0066696_108121462	3300006032	Soil	IRRAQEAGGIVEDRDPDAEAWIFISLGLLSTIDRRLGTVGDHDFEGVFTSRRLWMTGGVRPDSE*
Ga0066656_109916763	3300006034	Soil	AWIFISLGLLSTIDRRLGTVGDHDFEGVFTSRRLWMTGGVRPDSE*
Ga0075368_103690441	3300006042	Populus Endosphere	AERDPDAEAWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAA*
Ga0066652_1008368112	3300006046	Soil	ADRDPEAEAWIFISLGLLSTIDARLGNIVGEEFEDIIASRRAWMTGQTI*
Ga0066652_1013609561	3300006046	Soil	ADRDPEAEAWIFISLGLLSTIDARLGNIVGEEFEDIIASRRAWMTGAF*
Ga0075417_100359373	3300006049	Populus Rhizosphere	AARIRDAQAEGGILKDRDPEAEAWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAS*
Ga0075422_103167852	3300006196	Populus Rhizosphere	FISLGLLSTIDRRLNGLVGEEFDRIRDSRRAWMTGKTT*
Ga0074055_118523801	3300006573	Soil	AGGIVAERDADAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRSWMTGT*
Ga0079222_101409911	3300006755	Agricultural Soil	SQEAGGVIAERDADAEAWIFISLGLLTTIDRRLGNLVGDEFEDIFASRRTWMTGSSS*
Ga0079220_107137291	3300006806	Agricultural Soil	DAEAWIFLSLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGSNS*
Ga0079220_110551692	3300006806	Agricultural Soil	PEAEAWIFISLGLLSTIDRRLGTLGDEDFEGVFASRRRWMTGPDRP*
Ga0075425_1019901481	3300006854	Populus Rhizosphere	PDAEAWIFISLGLLSTIDRRLNGLVGDEFDRIRDSRRAWMTGQG*
Ga0075429_1001321513	3300006880	Populus Rhizosphere	AWIFISLGLLTTIDRRLGNLVGDELEAIFASRRAWMTGAA*
Ga0075426_108093881	3300006903	Populus Rhizosphere	FISLGLLSTIDHRLGNIVGDEFQDIVASRREWMTGLAS*
Ga0075426_112401261	3300006903	Populus Rhizosphere	ISLGLLTTIDRRLANLVGDEFEDIFASRRAWMTGSSS*
Ga0075424_1017122031	3300006904	Populus Rhizosphere	WIFISLGLLTTIDRRLANLVGDEFEDIFASRRAWMTGSSS*
Ga0105240_123140891	3300009093	Corn Rhizosphere	LPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRITASRRAWMTGKTA*
Ga0114129_111739532	3300009147	Populus Rhizosphere	EAWIFISLGLLTTIDRRLGNLVGEEFDDIVASRRAWMTGSP*
Ga0105243_116549961	3300009148	Miscanthus Rhizosphere	GLLSTIDRRLGNLVGDEFDDIVASRRAWMTGTTS*
Ga0111538_103760511	3300009156	Populus Rhizosphere	RAQVSGAIIRDRDADAEAWIFISLGLLSTIDRRLNGLVGEEFDRIRDSRRAWMTGKTT*
Ga0105237_110810132	3300009545	Corn Rhizosphere	DAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGT*
Ga0126313_106614442	3300009840	Serpentine Soil	ERDPDAEAWIFISLGLLTTIDRRLGNLVGDEFDDIVASRRTWMTGKPA*
Ga0126315_100425641	3300010038	Serpentine Soil	VAERNPDAEAWIFISLGLLTTIDRRLGSIVGEELDDIFASRRAWMTGSSS*
Ga0126315_107215981	3300010038	Serpentine Soil	AAGGVVAERNPDAEAWIFISLGLLTTIDRRLGSIVGEELDDIFASRRAWMTGSSA*
Ga0126309_100837352	3300010039	Serpentine Soil	RDPDAEAWIFVSLGLLTTIDRRLGSLVGEEFDAIVASRRAWMTGH*
Ga0126309_101057091	3300010039	Serpentine Soil	LVAARDADAEAWIFVSLGLLTTIDRRLDNLVGDEFADISASRRAWMTGLAE*
Ga0127503_101563572	3300010154	Soil	GIAKDRDAGAEAWIFISLGLLSTIDRRLGTVGDRDFEGVFASRRRWMLGENGL*
Ga0134070_102844961	3300010301	Grasslands Soil	SQEQGGILPERDADAEAWIFISLGLLSTIDHRLGNIVGEEFEDIVASRKAWMTGKTD*
Ga0134071_102942361	3300010336	Grasslands Soil	IKQDREPDAEAWIFISLGLLSTIDRRLGTVGDRDFEAVFASRRAWMTGEGSS*
Ga0134062_101593942	3300010337	Grasslands Soil	RRGQEQGGILPSRDAEAEAWIFISLGLLSTIDHRLGSLVGEEFDDIIASRREWMTGKTG*
Ga0134126_104107862	3300010396	Terrestrial Soil	SLGLLSTIDRRLGNRVGDEFDDIVASRRAWMTGA*
Ga0138505_1000167202	3300010999	Soil	GGIFPERDPDAEAWISISLGLLTTIDRRLGNLVGDEFDDIVASRRNWMTGKSA*
Ga0138513_1000179772	3300011000	Soil	FISLGLLTTIDRRLGGIVGDELEDIFASRREWMTGSST*
Ga0137365_103888592	3300012201	Vadose Zone Soil	EAWIFISLGLLSTIDNRLGSLVGEEFDDIIASRRHWMTGRTD*
Ga0137365_111430531	3300012201	Vadose Zone Soil	ISLGLLSTIDRRLGNLVGEQFDDIVASRRTWMTGT*
Ga0134048_11349091	3300012400	Grasslands Soil	RAQEAGGIVADRDADAEAWIFISLGLLSTIDHRLGNIVGDEFDDIVSSRREWMTGLAP*
Ga0157342_10174281	3300012507	Arabidopsis Rhizosphere	AERDPDAEAWIFISLGLLTTIDRRLGNLVGDEFEDIFASRRTWMTGSSS*
Ga0157354_10171651	3300012517	Unplanted Soil	GLLTTIDRRLGNLVGDELEDIFTSRREWMTGSRT*
Ga0137373_100324481	3300012532	Vadose Zone Soil	ILSDRDADAEAWIFISLGLLSTIDHRLGNIVGDDFDAIVASRREWMTGRTD*
Ga0157296_102026482	3300012905	Soil	ERDPDAEAWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAA*
Ga0157286_100032754	3300012908	Soil	SLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAA*
Ga0157308_100941822	3300012910	Soil	DAEAWIFMSLGLLTTIDRRLGNLVGDEFEDVFASRREWMTGSTA*
Ga0157302_105557201	3300012915	Soil	IRNSQEAGGVIAERDADAEAWIFISLGLLTTIDRRLGNLVGDEFEDVFASRREWMTGSTA
Ga0164300_100317723	3300012951	Soil	TSQEAGGILDERDADAEAWIFISLGLLSTIDRRLGTVGDHDFEGVFASRRRWMIGESTPE
Ga0164300_105711301	3300012951	Soil	GIAKDRDAGAEAWICISLGLLSTIDRRLGTVGDRDFEGVFASRRRWMVGGDRP*
Ga0164298_107290582	3300012955	Soil	GGILEERDADAEAWIFISLGLLSTIDRRIGTVGDHDFEGVFASRRRWMVGEMAAEK*
Ga0164298_109363721	3300012955	Soil	QAAGGIVAERDADAEAWIFISLGLLSTIDRRLGNLVGEEFDDIVASRRAWMTGTP*
Ga0164299_106348802	3300012958	Soil	EAWIFISLGLLSTIDRRLGNLVGEQFDDIVASRRAWMTGT*
Ga0134087_103111641	3300012977	Grasslands Soil	DPDAEAWIFISLGLLSTIDRRLGTVGDHDFEGVFTSRRLWMTGGVRPDSE*
Ga0134087_106965851	3300012977	Grasslands Soil	WIFISLGLLSTIDRRLGNLVGDGFDDIVASRRAWMTGT*
Ga0164304_109242992	3300012986	Soil	LGLLTTIDRRLANLVGDEFEDIFASRRTWMTGSSS*
Ga0164304_116681271	3300012986	Soil	EAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRSWMTGT*
Ga0163162_101241824	3300013306	Switchgrass Rhizosphere	AGGVLPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRIIASRRAWMTGKTA*
Ga0120179_10033101	3300013763	Permafrost	EAGAVVADRDARAEAWIVISLGLLGSIGRRLGGLLGDDFERVSASRRRWMLGE*
Ga0120125_11782741	3300014056	Permafrost	GRDPDAEAWIFISLGLLSTIDRRLGTVGDHDFEEVFASRRLWMLGEKGESAP*
Ga0134078_102549201	3300014157	Grasslands Soil	RDADAEAWIFISLGLLSTIDHRLGNIVGDDFDAIVASRREWMTGRTD*
Ga0134078_102609151	3300014157	Grasslands Soil	EAGGILPDRDPDAEAWIFISLGLLSTIDHRLGNIVGDEFEDIVASRRAWMTGRAD*
Ga0134078_103393731	3300014157	Grasslands Soil	GLLSTIDHRLGNIVGGEFEDIVASRKAWMTGKSD*
Ga0157380_100961904	3300014326	Switchgrass Rhizosphere	EVIRGAQAAGGIVEERDADAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGT
Ga0134072_103431001	3300015357	Grasslands Soil	DADAEAWIFISLGLLSTIDRRLGAVGEHGFEGVFASRRAWMTGRP*
Ga0187786_103218702	3300017944	Tropical Peatland	VAERDPDAEAWIFISLGLLNTIDHRLGSLVAGEFDDIVASRREWMTGHTA
Ga0184605_100884533	3300018027	Groundwater Sediment	AEAWIFISLGLLSTIDRRLGDLVGEEFERIVASRRKWMTGKS
Ga0187788_100714212	3300018032	Tropical Peatland	QEKGGIVAERDPDAEAWILISLGLLNTIDHRLGGLVGSEFDDIVASRRAWMTGESA
Ga0184618_103004992	3300018071	Groundwater Sediment	AWIFISLGLLSTLDRRLGIVGDHQFEGVFASRRLWMTGDSIQP
Ga0066667_108383381	3300018433	Grasslands Soil	FISLGLLSTIDHRLGNIVGDEFEAIVASRRAWMTERGSSNE
Ga0066667_122568941	3300018433	Grasslands Soil	WIFISLGLLSTIDRRLGAVGEPGFEGVFASRRAWMTGCP
Ga0066669_115129101	3300018482	Grasslands Soil	QEAGGIKRDRDPDAEAWIFISLGLLSTIDRRLGTLGEHDFEGVFASRRRWMVGESAA
Ga0173482_102505491	3300019361	Soil	AWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAA
Ga0173479_101512531	3300019362	Soil	DRDADAEAWIFISLGLLSTIDRRLANLVGEDFDDIVASRRAWMTGA
Ga0193730_11627221	3300020002	Soil	ERDADAEAWIFISLGLLSTIDRRLSGLVGDDFDRIIASRRAWMTGR
Ga0193719_103635441	3300021344	Soil	PDAEAWIFISLGLLSTIDHRLGNIVGSEFEDIVASRRMWMTGRAD
Ga0222622_101645882	3300022756	Groundwater Sediment	GVLPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRIIASRRTWMTGKSA
Ga0247785_10131771	3300022889	Soil	AGGVVAERDPDAEAWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAA
Ga0247665_10247012	3300024219	Soil	EAGGVIAERDPDAEAWIFISLGLLTTIDRRLGNLVGDEFEDIFASRRTWMTGSSS
Ga0247673_10123491	3300024224	Soil	DSQEAGGVIAERDPDAEAWIFISLGLLTTIDRRLGNLVGDEFEDIFASRRTWMTGSSS
Ga0247677_10358841	3300024245	Soil	IVGERDADAEAWIFISLGLLSTIDRRLGNLVGEEFDGIVVSRRTWMTGA
Ga0207682_105654561	3300025893	Miscanthus Rhizosphere	GGVIAERDADAEAWIFISLGLLTTIDRRLANLVGDEFEDIFASRRTWMTGSSS
Ga0207684_105273961	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RRDRDPDAEAWIFISLGLLSTIDHRLGNIVGDEFDAIVASRREWMTGLRS
Ga0207660_102430172	3300025917	Corn Rhizosphere	DADAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGT
Ga0207670_112103402	3300025936	Switchgrass Rhizosphere	AEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGT
Ga0207712_102458141	3300025961	Switchgrass Rhizosphere	SQEAGGVLPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRITASRRAWMTGKTT
Ga0207702_106468361	3300026078	Corn Rhizosphere	QEAGGIVAERDPDAEAWIFISLGLLSTIDHRLGNIVGDEFTDIVSSRREWMTGRPT
Ga0207698_117531872	3300026142	Corn Rhizosphere	VEERDADAEAWIFISLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGT
Ga0209473_12359861	3300026330	Soil	LGLLSTIDHRLGNIVGDEFQDIVASRREWMTGRMD
Ga0209378_10851241	3300026528	Soil	RNADAEAWIFISLGLLSTIDRRLGTVGDHDFEGVFASRRRWMTGADPA
Ga0209177_103342042	3300027775	Agricultural Soil	EAWIFLSLGLLSTIDRRLGNLVGDEFDDIVASRRAWMTGA
Ga0209814_100206184	3300027873	Populus Rhizosphere	AAERDPDAEAWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAS
Ga0247685_10017291	3300028065	Soil	DPDAEAWIFISLGLLTTIDRRLGNLVGDEFEDIFASRRTWMTGSSS
Ga0307293_101720831	3300028711	Soil	FISLGLLSTIDHRLGNLVGEEFENIIASRRAWMTGRTD
Ga0307303_100181732	3300028713	Soil	DADAEAWIFISLGLLSTIDRRLTGLVGDEFDRIIASRRAWMTGR
Ga0307303_101346781	3300028713	Soil	SLGLLTTIDRRLTGLVGEEFDDIVASRRAWMTGTTP
Ga0307317_101116571	3300028720	Soil	EAGGVLPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRIIASRRAWMTGKTA
Ga0307318_101915391	3300028744	Soil	EAWIFISLGLLSTIDRRLTGLVGDEFDRIIASRRAWMTGR
Ga0307318_103363661	3300028744	Soil	RRAQAEGGLLQERDADAEAWIFISLGLLTTIDRRLGNLVGEDFESIVASRRAWMTGA
Ga0307316_101569452	3300028755	Soil	QAEGGLVADRDPEAEAWIFISLGLLSTIDSRLGNIIGDDFEDIIASRRAWMTAS
Ga0307294_100463072	3300028810	Soil	LPDRDVDAEAWIFISLGLLSTIDRRLSGLVGDEFDRITASRRAWMTGKTA
Ga0307286_102032612	3300028876	Soil	AEAWIFISLGLLSTIDRRLTGLVGDEFDRIIASRRAWMTGR
Ga0307308_103459972	3300028884	Soil	GGVRRERDADAEAWIFISLGLLSTIDHRLGNIVGDDFDDIVASRRAWMTGRTD
Ga0307304_100311602	3300028885	Soil	RRAQESGGIRPERDPDAEAWIFISLGLLTTIDRRLGNLVGEEFDDIVASRRTWMTGKPA
Ga0247827_110647471	3300028889	Soil	AEAWIFISLGLLSTIDRRLGNLVGEEFDRIVDSRRAWMTGA
Ga0307501_100976662	3300031152	Soil	VCDRDADAEAWIFISLGLLSTIDRRLGNLVGEQFDDIVASRRTWMTGT
Ga0307496_100575942	3300031200	Soil	DVIRKAQKAGGIIPERDADAEAWIFISLGLLSTIDRRLTGLVGDEFDRIIASRRAWMTGR
Ga0307415_1023334031	3300032126	Rhizosphere	RNPDAEAWIFISLGLLTTIDRRLGSIVGEELDDIFASRRAWMTGSSA
Ga0335077_113406661	3300033158	Soil	PEAEAWIFISLGLLSTIDARLGNIVGEEFEDIIASRRAWMTGRAD
Ga0310811_102793311	3300033475	Soil	DAEAWIFISLGLLTTIDRRLGNLVGDELEDIFASRRAWMTGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062288

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences