NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F062261

Metagenome Family F062261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062261
Family Type Metagenome
Number of Sequences 131
Average Sequence Length 58 residues
Representative Sequence MDPMYDLNSWSKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR
Number of Associated Samples 45
Number of Associated Scaffolds 131

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.62 %
% of genes near scaffold ends (potentially truncated) 20.61 %
% of genes from short scaffolds (< 2000 bps) 85.50 %
Associated GOLD sequencing projects 42
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.046 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(59.542 % of family members)
Environment Ontology (ENVO) Unclassified
(63.359 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.939 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.38%    β-sheet: 0.00%    Coil/Unstructured: 47.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 131 Family Scaffolds
PF00583Acetyltransf_1 3.05
PF07883Cupin_2 1.53
PF06441EHN 1.53
PF00196GerE 1.53
PF13490zf-HC2 1.53
PF01571GCV_T 1.53
PF00248Aldo_ket_red 0.76
PF01161PBP 0.76
PF10503Esterase_PHB 0.76
PF00931NB-ARC 0.76
PF08659KR 0.76
PF14026DUF4242 0.76
PF04545Sigma70_r4 0.76
PF04542Sigma70_r2 0.76
PF08281Sigma70_r4_2 0.76
PF17042NBD_C 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 131 Family Scaffolds
COG05962-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase foldCoenzyme transport and metabolism [H] 1.53
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.76
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.76
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.76
COG1881Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) familyGeneral function prediction only [R] 0.76
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.76


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.05 %
All OrganismsrootAll Organisms25.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_119793139Not Available776Open in IMG/M
3300002568|C688J35102_120732838Not Available1442Open in IMG/M
3300002568|C688J35102_120884559All Organisms → cellular organisms → Bacteria2013Open in IMG/M
3300004081|Ga0063454_100663754Not Available777Open in IMG/M
3300005562|Ga0058697_10129967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1079Open in IMG/M
3300005562|Ga0058697_10448785Not Available649Open in IMG/M
3300005562|Ga0058697_10811470Not Available507Open in IMG/M
3300006618|Ga0101566_10168905Not Available678Open in IMG/M
3300007790|Ga0105679_11004751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1553Open in IMG/M
3300009789|Ga0126307_10002034All Organisms → cellular organisms → Bacteria13564Open in IMG/M
3300009789|Ga0126307_10004219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9929Open in IMG/M
3300009789|Ga0126307_10026763All Organisms → cellular organisms → Bacteria4413Open in IMG/M
3300009789|Ga0126307_10029744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium4194Open in IMG/M
3300009789|Ga0126307_10053420All Organisms → cellular organisms → Bacteria3157Open in IMG/M
3300009789|Ga0126307_10144907Not Available1899Open in IMG/M
3300009789|Ga0126307_10211520Not Available1557Open in IMG/M
3300009789|Ga0126307_10214161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes friuliensis → Actinoplanes friuliensis DSM 73581546Open in IMG/M
3300009789|Ga0126307_10301637Not Available1289Open in IMG/M
3300009789|Ga0126307_10670564Not Available837Open in IMG/M
3300009789|Ga0126307_10679232Not Available831Open in IMG/M
3300009840|Ga0126313_10132949All Organisms → cellular organisms → Bacteria1863Open in IMG/M
3300009840|Ga0126313_10151884All Organisms → cellular organisms → Bacteria1750Open in IMG/M
3300009840|Ga0126313_10236684Not Available1412Open in IMG/M
3300009840|Ga0126313_10297198Not Available1262Open in IMG/M
3300009840|Ga0126313_10444229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1033Open in IMG/M
3300009840|Ga0126313_10486875Not Available987Open in IMG/M
3300009840|Ga0126313_10698636Not Available821Open in IMG/M
3300009840|Ga0126313_11394479Not Available580Open in IMG/M
3300009840|Ga0126313_11414914Not Available576Open in IMG/M
3300009840|Ga0126313_11455592Not Available568Open in IMG/M
3300010036|Ga0126305_10016285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae3834Open in IMG/M
3300010036|Ga0126305_10039754Not Available2616Open in IMG/M
3300010036|Ga0126305_10055393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2262Open in IMG/M
3300010036|Ga0126305_10088382Not Available1839Open in IMG/M
3300010036|Ga0126305_10112310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1652Open in IMG/M
3300010036|Ga0126305_10179982All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300010036|Ga0126305_10304417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1035Open in IMG/M
3300010036|Ga0126305_10386709Not Available921Open in IMG/M
3300010036|Ga0126305_11048688Not Available560Open in IMG/M
3300010037|Ga0126304_10851819Not Available619Open in IMG/M
3300010037|Ga0126304_11081846Not Available548Open in IMG/M
3300010037|Ga0126304_11102471Not Available543Open in IMG/M
3300010038|Ga0126315_10049409Not Available2278Open in IMG/M
3300010038|Ga0126315_10075176Not Available1891Open in IMG/M
3300010038|Ga0126315_10095414Not Available1698Open in IMG/M
3300010038|Ga0126315_10575927Not Available725Open in IMG/M
3300010038|Ga0126315_10605342Not Available708Open in IMG/M
3300010039|Ga0126309_10247354Not Available1009Open in IMG/M
3300010039|Ga0126309_10771645Not Available625Open in IMG/M
3300010039|Ga0126309_11184354Not Available524Open in IMG/M
3300010040|Ga0126308_10015614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae3979Open in IMG/M
3300010040|Ga0126308_10131397Not Available1565Open in IMG/M
3300010040|Ga0126308_10196973Not Available1293Open in IMG/M
3300010040|Ga0126308_10211552Not Available1249Open in IMG/M
3300010040|Ga0126308_10215319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1239Open in IMG/M
3300010040|Ga0126308_10254140Not Available1144Open in IMG/M
3300010040|Ga0126308_10408742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium906Open in IMG/M
3300010040|Ga0126308_10530488Not Available798Open in IMG/M
3300010040|Ga0126308_10776156Not Available662Open in IMG/M
3300010040|Ga0126308_10938975Not Available604Open in IMG/M
3300010040|Ga0126308_11110551Not Available557Open in IMG/M
3300010041|Ga0126312_10036664All Organisms → cellular organisms → Bacteria3275Open in IMG/M
3300010041|Ga0126312_10048571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2841Open in IMG/M
3300010041|Ga0126312_10172761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1506Open in IMG/M
3300010041|Ga0126312_10419205Not Available953Open in IMG/M
3300010041|Ga0126312_10474495Not Available894Open in IMG/M
3300010041|Ga0126312_10645573Not Available762Open in IMG/M
3300010042|Ga0126314_10389606Not Available1003Open in IMG/M
3300010042|Ga0126314_10500532Not Available882Open in IMG/M
3300010044|Ga0126310_10058835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2171Open in IMG/M
3300010044|Ga0126310_10060383All Organisms → cellular organisms → Bacteria2148Open in IMG/M
3300010044|Ga0126310_10310887Not Available1089Open in IMG/M
3300010044|Ga0126310_10487805Not Available898Open in IMG/M
3300010044|Ga0126310_10717426Not Available760Open in IMG/M
3300010044|Ga0126310_10812358Not Available720Open in IMG/M
3300010044|Ga0126310_11052524Not Available644Open in IMG/M
3300010045|Ga0126311_10797673Not Available761Open in IMG/M
3300010045|Ga0126311_10830615Not Available746Open in IMG/M
3300010045|Ga0126311_11396972Not Available584Open in IMG/M
3300010045|Ga0126311_11547898Not Available557Open in IMG/M
3300010166|Ga0126306_10204414All Organisms → cellular organisms → Bacteria → Terrabacteria group1493Open in IMG/M
3300010166|Ga0126306_10731578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae795Open in IMG/M
3300010166|Ga0126306_10790159Not Available765Open in IMG/M
3300010166|Ga0126306_10899132Not Available718Open in IMG/M
3300010166|Ga0126306_11148228Not Available637Open in IMG/M
3300010166|Ga0126306_11432554Not Available572Open in IMG/M
3300010395|Ga0058701_10492684Not Available695Open in IMG/M
3300012469|Ga0150984_114537600Not Available543Open in IMG/M
3300014487|Ga0182000_10074545All Organisms → cellular organisms → Bacteria → Proteobacteria1079Open in IMG/M
3300014487|Ga0182000_10354395Not Available633Open in IMG/M
3300014487|Ga0182000_10410068Not Available604Open in IMG/M
3300014487|Ga0182000_10586020Not Available536Open in IMG/M
3300014488|Ga0182001_10203077Not Available727Open in IMG/M
3300018432|Ga0190275_11014338Not Available901Open in IMG/M
3300018465|Ga0190269_10331448Not Available905Open in IMG/M
3300018465|Ga0190269_10780617Not Available684Open in IMG/M
3300018465|Ga0190269_10827281Not Available671Open in IMG/M
3300018466|Ga0190268_10073156Not Available1475Open in IMG/M
3300018466|Ga0190268_10135592Not Available1226Open in IMG/M
3300019767|Ga0190267_10689236Not Available654Open in IMG/M
3300019767|Ga0190267_11316647Not Available541Open in IMG/M
3300028705|Ga0307276_10019840All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300028705|Ga0307276_10173333Not Available558Open in IMG/M
3300028721|Ga0307315_10164021Not Available679Open in IMG/M
3300028754|Ga0307297_10001670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae5315Open in IMG/M
3300028778|Ga0307288_10340867Not Available602Open in IMG/M
3300030496|Ga0268240_10012041Not Available1498Open in IMG/M
3300030510|Ga0268243_1014256Not Available1511Open in IMG/M
3300030510|Ga0268243_1152648Not Available560Open in IMG/M
3300030511|Ga0268241_10002617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium3259Open in IMG/M
3300031731|Ga0307405_11097885Not Available683Open in IMG/M
3300031824|Ga0307413_10947975Not Available734Open in IMG/M
3300031852|Ga0307410_10190906All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300031903|Ga0307407_10439094Not Available945Open in IMG/M
3300031911|Ga0307412_12168199Not Available517Open in IMG/M
3300031995|Ga0307409_100776907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium964Open in IMG/M
3300031995|Ga0307409_101342365Not Available741Open in IMG/M
3300031995|Ga0307409_101550095Not Available690Open in IMG/M
3300031996|Ga0308176_12411155Not Available561Open in IMG/M
3300032002|Ga0307416_101423226Not Available799Open in IMG/M
3300032002|Ga0307416_102446801Not Available621Open in IMG/M
3300032004|Ga0307414_12026851Not Available537Open in IMG/M
3300032005|Ga0307411_11453907Not Available629Open in IMG/M
3300032126|Ga0307415_101078174Not Available751Open in IMG/M
3300032126|Ga0307415_101271713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium696Open in IMG/M
3300032159|Ga0268251_10246423Not Available720Open in IMG/M
3300032159|Ga0268251_10375062Not Available610Open in IMG/M
3300032159|Ga0268251_10465343Not Available560Open in IMG/M
3300032159|Ga0268251_10476710Not Available554Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil59.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.69%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere10.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.87%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave6.11%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.76%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300006618Soil microbial communities from the Leymus chinensis steppe, China - without N additionEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010395Agave microbial communities from Guanajuato, Mexico - Or.Ma.eHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300030496Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)EnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10639281123300001431SoilMDPTMYDLHSWSKRRREEALREVQRRSVVKRAKRNGGTRFEFGRVSSAL
C688J35102_11979313913300002568SoilMDPMYDYYYWSKQRREEQIGEAQRRSLTKRGKGDRSTRFELGVVGSALSGVLGLFR*
C688J35102_12073283823300002568SoilMDPMYDLNSWSKQHREEALREVQGRSLAKQGKGDRKTPFKQGGVGYALSSVLSLLK*
C688J35102_12088455913300002568SoilMDPMYDLISWSKPRREEALREAQRRSLPKQRKGNRSTHFQLGRVGSAFSSVLGLLR*
Ga0063454_10066375423300004081SoilMDPMYDLISWSKPRREEALREAQRRSLPKQRKGNRSTHFQLGRVDSAFSSVLGLLR*
Ga0058697_1012996713300005562AgaveMDPMYEIHNWSKKRREEVIREAQRRSLAKQVKGDRSTPFKLGVVGSVFSSVLSLLR*
Ga0058697_1044878523300005562AgaveMDPMYDLDSWSKQRREEAIREAQRRSLAKQGKGDRRTLLFKLSGVGSALSGV
Ga0058697_1081147023300005562AgaveMDPLYDIHSWSKQHREKALREAQRRSLTKQGKGDRRTPFKQGGVGYALSSVLSLLG*
Ga0101566_1016890523300006618SoilMDPMYDLHYWGKQRREEALREAQRRSLAKQEKGDRRTPFKLAGVGSALSGVLSLLR*
Ga0105679_1100475113300007790SoilMDPLYVIHSWSKQRREEALREAQRRSLAKQGKGDRGTPFNRGGVGSALSAVLALLR*
Ga0126307_10002034103300009789Serpentine SoilMDPMYDLHYWGKQRREEALRQAQRRSLAKQGKGERKTPFKLGGVGSALSGVLGLFR*
Ga0126307_10004219103300009789Serpentine SoilMDPMYDHYSWSKQRREEVLREAQSRSLAKQAKAGPGTRFELDRVGSALSGAPSLFR*
Ga0126307_1002676313300009789Serpentine SoilVGAPALSNIRRKRSMDPKYDPHYWGKQRREEAIREAQRRLLAKQGKGDRSTHFELGRVGS
Ga0126307_1002974423300009789Serpentine SoilMDAMYDLHSWSMQRREEALREAQRRSVAKQAKGDGGRRFEVGRGGSALSGLLSLLR*
Ga0126307_1005342023300009789Serpentine SoilMYDLRSWSKQRREETLREAQRRSLAKQAKGDRGTRFELGRVGSALSGVLSLLR*
Ga0126307_1014490723300009789Serpentine SoilMYDLNSWSKQRREEALRETQRRSLAKQGKGDRGKPFKRGGVGSALSSVLSLLR*
Ga0126307_1021152023300009789Serpentine SoilMYDLNSWIKQRREEEIREAQRRSLAKQGKGDRRTPFKLGVAGSALSSVLSLLR*
Ga0126307_1021416133300009789Serpentine SoilMYDLHSWSKQRCEEAIREAQKRSLTKQAKGDRVTRFGLGRVGSALGAVLSLLR*
Ga0126307_1030163733300009789Serpentine SoilMYDLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALGGVLSLLR*
Ga0126307_1067056413300009789Serpentine SoilMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR*
Ga0126307_1067923213300009789Serpentine SoilSKEKKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDCRTPFKLGGVGSALSGVLSLLR*
Ga0126313_1013294923300009840Serpentine SoilMDPMYDLHYWGRQRREEALREAQRRSLAKQGKGDRRTPFKLAGVGSALSGVLSLLR*
Ga0126313_1015188433300009840Serpentine SoilMYDLHYWGKQRREEALREAQRRSLAKQGKVDRKTPFKLAGVGSALSGVLGLFR*
Ga0126313_1023668413300009840Serpentine SoilMDPTMYDLHSWSKQRREEAMREVQRRSLSKRDKGDRVMRFEPGHVGSALSGVLSLLR*
Ga0126313_1029719823300009840Serpentine SoilMDPMYDLNSWSKQRREEALREAQRRSLAKQGKGDRTTPFKLGGVGSALSNVLSLFT*
Ga0126313_1044422913300009840Serpentine SoilSKQRREEVLREAQRRSLAKQAKEDRGTRFELGRVGSALSGILSSLR*
Ga0126313_1048687513300009840Serpentine SoilMDPMYDLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALSQAQEDALR*
Ga0126313_1069863613300009840Serpentine SoilMHDLYSWSKQRREEALREARRRSVAKQAKGSRGRRFEPARVGSALSGVLSLLR*
Ga0126313_1139447913300009840Serpentine SoilMDLMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDGVGSVLSGVLSLLR*
Ga0126313_1141491413300009840Serpentine SoilMDPMYDLNSWSKQRREEAPRETQRRSLAKQGKGDRGKPFKRGGVGSALSSVLSLLR*
Ga0126313_1145559213300009840Serpentine SoilQRRKKSMDAMYDLRSWSKQRREETLREAQRRSLAKQAKGDRGTRFELGRVGSALSGVLSLLR*
Ga0126305_1001628563300010036Serpentine SoilMDPKYDPHYWGKQRREEAIREAQRRLLAKQGKGDRSTHFELGRVGSALSGVLGLLR*
Ga0126305_1003975423300010036Serpentine SoilMDPMYDLNSWSKQRREEALRETQRRSLAKQGKGDRGKPFKRGGVGSALSSVLSLLR*
Ga0126305_1005539333300010036Serpentine SoilMYDSHYWGKQRREGAIREAQRRSLTKQGKGDRSTHFELGVVGSALSGVLGLLR*
Ga0126305_1008838243300010036Serpentine SoilMDPMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDGVGSALSGVLSLLR*
Ga0126305_1011231033300010036Serpentine SoilMDAMYNPHTWSKQRREETLREAQRRSLDKQAKGERGTRFELGGIGSVLSGVLSLLK*
Ga0126305_1017998213300010036Serpentine SoilSAEPKGEKKSMDAMYDLRSWSKQRREETLREAQRRSLAKQAKGDRGTRFELGRVGSALSGVLSLLR*
Ga0126305_1030441713300010036Serpentine SoilKQRREEEIREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR*
Ga0126305_1038670913300010036Serpentine SoilMDPRYDLHYWSKQRRDEAIREAQKRSLAKQGKGDCRTPFKVGGVGSALSSVLSLLR*
Ga0126305_1104868813300010036Serpentine SoilMYDIHYWNKQRREEEIREAQRRSLAKQGKGDRRTPFKVGGVGSALSGVLSLLR*
Ga0126304_1085181913300010037Serpentine SoilPMYDLNSWSKQRREEALRETQRRSLAEQGKGDRGKPFKRGGVGSALSSLLSLLR*
Ga0126304_1108184613300010037Serpentine SoilMDPRYDLHYWSKQRRDEAIREAQKRSLAKQGKGDCRTPFKVGSVGSALSSVLSLLR*
Ga0126304_1110247133300010037Serpentine SoilKRSMDPMYDIHYWIKQRREEEIREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR*
Ga0126315_1004940933300010038Serpentine SoilMDPMHDLYSWSKQRREEALRGARRRSVAKQAKGSRGRRFEPARVGSALSGVLSLLR*
Ga0126315_1007517623300010038Serpentine SoilMDPMYDFHSWSRQRCEEAIREAQRRSLTKQAKGDCVTRFGLGRVGSALGGVLSLLR*
Ga0126315_1009541423300010038Serpentine SoilMDLMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDGVGSALSGVLSLLR*
Ga0126315_1057592733300010038Serpentine SoilAEPGGERQSMDPMYDLHSWSKQRCEEAIREAQKRSLTKQAKGDRVTRFGLGRVGSALGAVLSLLR*
Ga0126315_1060534213300010038Serpentine SoilMDPMYDLDSWSKERREEALREAQRRCPGQARGKGDAVRPTPFELGHVGSALSGVLGLLR*
Ga0126309_1024735423300010039Serpentine SoilMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLVR*
Ga0126309_1077164513300010039Serpentine SoilMDPMYDLHYWGKQRREEALREAQRRSLAKQGKVDRKTPFKLAGVGSALSGVLGLFR*
Ga0126309_1118435423300010039Serpentine SoilMYDLHSWSKQRREEAMREAQRRSLAKQAKGGGGTRFELGRVGSALGGVLSLLR*
Ga0126308_1001561483300010040Serpentine SoilMDAMYDLRSWSKQRREETLREAQRRSLAKQAKGDRGTRFELGRVGSALSGVLSLLR*
Ga0126308_1013139733300010040Serpentine SoilMDPMYDLHYWGKQRREEAIREAQRRSLAKWGKGDRRTPFKVGGVGSALSSVLSLLR*
Ga0126308_1019697343300010040Serpentine SoilMYYLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALGGALSLLR*
Ga0126308_1021155223300010040Serpentine SoilMDPMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDRVGSVLSGVLSLLR*
Ga0126308_1021531913300010040Serpentine SoilMYDLHSWSKQRREEAMREAQRRSLAKQAKGDCGMRFELGRVGSALSGVLSLLR*
Ga0126308_1025414013300010040Serpentine SoilKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLAGVGSALSGALSLLR*
Ga0126308_1040874233300010040Serpentine SoilYDPHYWSKQRREEALREAQRRSLAKQGKGDRTTPLKLGGVGSALSSVLSLFT*
Ga0126308_1053048823300010040Serpentine SoilKQRREEAIREAQRRSLAKWGKGDRRTPFKVGGVGSALSGVLSLLR*
Ga0126308_1077615613300010040Serpentine SoilMYDLHYWGKQRREEAFREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR*
Ga0126308_1093897513300010040Serpentine SoilRRSLRRKRSMDPMYDLNSWIKQRREEEIREAQRRSLAKQGKGDRRTPFKLGVAGSALSSVLSLLR*
Ga0126308_1111055113300010040Serpentine SoilMDPMYDLHYWSKQRREEQIGEAQRRSLAKQGKGERKTPFKLGGVGSALSGVLGLFR*
Ga0126312_1003666423300010041Serpentine SoilMYDLHYWGKQRREEALREAQRRSLAKQGKVDRKTRFKLAGVGSALSGVLGLFR*
Ga0126312_1004857123300010041Serpentine SoilMDPMYDLNSWSQQRREEALREAQRRSLAKQGKGDRTTPFKLGGVGSALSNVLSLFT*
Ga0126312_1017276113300010041Serpentine SoilMYDLHYWGRQRREEALREAQRRSLAKQGKGDRRTPFKLAGVGSALSGVLSLLR*
Ga0126312_1041920513300010041Serpentine SoilMDPMYDLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALGGVLSLLR*
Ga0126312_1047449513300010041Serpentine SoilMYDLHYWSKQHREEEIREAQRRSLAKQGKGDRRTPFRLGGVGSALSSVLSLLR*
Ga0126312_1064557313300010041Serpentine SoilMDPMYDLHSWSKQHREEALREAKRRSLAKRTKGGGGTRFQPGGVSSALSCVLSLLR*
Ga0126314_1038960623300010042Serpentine SoilMANTCVCRPGFLRTVGAPALSKEKKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDCRTPFKLGGVGSALSGVLSLLR*
Ga0126314_1050053233300010042Serpentine SoilMDPMYDLHSWSKQRREEAMREAKRRSLAKRTKGGGGTRFQLGRVGSALGGVLSLLR*
Ga0126310_1005883513300010044Serpentine SoilMYDLHSWSMQRREEALREAQRRSVAKQAKGDGGRRFEVGRGGSALSGLLSLLR*
Ga0126310_1006038333300010044Serpentine SoilMYDLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALSQAQEDALR*
Ga0126310_1031088713300010044Serpentine SoilMCDLHSWSKQRREEVMREAQRRSLAKRAKGGGGTRFELGRVGSALGGVLSLLR*
Ga0126310_1048780523300010044Serpentine SoilMYDLHPWSKQRREELLREAQRRSLAKQVKEDRGTRFDLGRVGSALSGTLSSFR*
Ga0126310_1071742633300010044Serpentine SoilMYDLHSWSKQRREEAMREAQRRSLAKRAKGGRVMRFEPGHVGSALGGVLSLLR*
Ga0126310_1081235813300010044Serpentine SoilCRESKGGKLSMMSMYDPHPWSKQRREEVLREAQRRSLAKQAKEDRGTRFELGRLGSALSSILSLLR*
Ga0126310_1105252413300010044Serpentine SoilMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLAGVGSALSGALSLLR*
Ga0126311_1079767323300010045Serpentine SoilGAPALSKEKKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR*
Ga0126311_1083061513300010045Serpentine SoilMDLMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDRVGSVLSGVLSLLR*
Ga0126311_1139697213300010045Serpentine SoilMYDLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALGGVLS
Ga0126311_1154789813300010045Serpentine SoilMYDLHSWSKQRSEEAMREAQKRSLAKRAKGGSGTRFELGRVGSALGGVLSLLR*
Ga0126306_1020441413300010166Serpentine SoilAEPKGARQSMDPMYDLHSWSKQRREEAMREAQRRSLAKRAKGGGGTRFELGRVGSALGGVLSLLR*
Ga0126306_1073157833300010166Serpentine SoilLSKQRREKALREAQRRSLAKQAKEDRGTRFELGRVGSALSGILSSLR*
Ga0126306_1079015923300010166Serpentine SoilMYDIHYWIKQRREEEIREAQRRSLAKQGKGDRRTPFKVGGVGSALSGVLSLLR*
Ga0126306_1089913213300010166Serpentine SoilKGERQSMDAMYDLYSWSKQRREEAMREAQRRSLAKQAKGDCGMRFELGRVGSALSGVLSLLR*
Ga0126306_1114822823300010166Serpentine SoilTVGDPALSKEKKGMDPMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDGVGSALSGVLSLLR*
Ga0126306_1128220013300010166Serpentine SoilMDPTMYDLHSWSKRRREEAHREVQRRSVAKRAKRNGGTRFEFGRVSSALSGVLSLLR*
Ga0126306_1143255423300010166Serpentine SoilMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLDGVGSVLSGVLSLLR
Ga0058701_1049268423300010395AgaveMYDIHSWSKQRREEAIREAQRRSLAKQGKADRSTHFELSCVGSALSGVLGLLK*
Ga0150984_11453760013300012469Avena Fatua RhizosphereMDLMYDYYYWSKQRREEQIGEAQRRSLAKQVKGDRRTLSFKLGGVGSALSGILSLLR*
Ga0182000_1007454523300014487SoilMDPLHDIDYWSKQRREEEIREAQRGSLAKKGKADHKTPFKLSGVGSALSGVLGPFR*
Ga0182000_1035439513300014487SoilMYDLDSWSKQRREAAIREAQRRSLAKQGKGDRRTLPFKLSGVGSILSGVLGLFR*
Ga0182000_1041006823300014487SoilMYDPHYWNKQRREEAIGEAQRRSLAKQGKGERKTPFKLGGVGSALSSALSMLR*
Ga0182000_1058602023300014487SoilMDPMYDLNSWSKWRREEALREAQRRSLAKQGKGDRGTPFKRGGVGSALSAVLALLR*
Ga0182001_1020307713300014488SoilMYDIHYWSKQRREEEIREAQRRSLAKQGKGERKTSFKLVGVGSALSCILGLLR*
Ga0190275_1101433823300018432SoilMANTCVCRPGFLRTVGVPALSKEKKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR
Ga0190269_1033144823300018465SoilMYDPNSWSKQRREEALREAQRRSLAKQGIGDRRTPFKLGGVGSALSSVLGLLR
Ga0190269_1078061713300018465SoilMDPLYDIHSWSKQHREEALREAQRRSLAKQGKGDRRTPFKLAGVGSALRGVLSLLR
Ga0190269_1082728113300018465SoilMANTCVCRPGFLRTVGAPALSKEKKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDRSTLFKLGGVGSDLSGVLSLLR
Ga0190268_1007315623300018466SoilMANTCVCRPGFLRTVGAPALSKEKKSMDPMYDLHYWGKQRREEAPREAQRRSLAKQGIGDRRTPFKLGGVGSALSGVLSLLR
Ga0190268_1013559223300018466SoilMYDPNSWSKQRREEALREAQRRSLAKQETGDRRTPFKLGGVGSALSGVLSLLR
Ga0190267_1068923613300019767SoilMDPMYDLNSWSEQRREEALRETQRRTLSKQGKGARKTPFKRGAVGSALSGVLGLFR
Ga0190267_1131664713300019767SoilMDPMYDLNSWSKRRREEAIREAQRRSLTKQGKGDRRTHFKLSGVGSALSGVLGLLK
Ga0307276_1001984023300028705SoilMDPMYDLHYWGKQRREEALREAQRRSLAKQGKADRRTPFKLGGVGSALSGVLSLLR
Ga0307276_1017333313300028705SoilLRRKRNMDPMYDLNYWSKQRREEAMTEAQRRSLAKQGIGDRRTPFKLGVVGSALSSVLSLLR
Ga0307315_1016402123300028721SoilMDPMYDIHSWSKQRREEAIREAQWRSLDKQGKVDRGRPFKLGVVGSALSGIMGLFR
Ga0307297_1000167073300028754SoilMDPRYDLNSWIKQRREEALREAQMRSLAKQGKGDRRTLPFKLSGVGSILSGVLGLFR
Ga0307288_1034086713300028778SoilMDPMYDLNYWSKQRREEAMTEAQRRSLAKQGIGDRRTPFKLGVVGSALSSVLSLLR
Ga0268240_1001204113300030496SoilMDPTMYDLHSWSKQRREEALREVQRRSVAKRAKRNGGTRFEFGRVSSALSGVLSCLGSLL
Ga0268243_101425633300030510SoilMDPMYDLNSWSKWRREEALREAQRRSLAKQGKGDRGTPFKRGGVGSALSAVLALLR
Ga0268243_115264813300030510SoilMDPMYDPHYWNKQRREEAIGEAQRRSLAKQGKGERKTPFKLGGVGSALSSALSMLR
Ga0268241_1000261733300030511SoilMDPTWYDLHSWGKQRREEALTEARRHSLARQAKDGCGTRFEPARVGSALGGVLSLLR
Ga0307405_1109788513300031731RhizosphereMANTCVCRPGFLRTVGAPALSKEKKSMDPMYDLHYWGKQRREEAFREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR
Ga0307413_1094797523300031824RhizosphereMDAMYDLYSWSKQRREEAMREAQRRSLAKQAKGDCGMRFELGRVGSALSGVLSLLR
Ga0307410_1019090623300031852RhizosphereMDPMYDLNSWSKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSNVLSLFT
Ga0307407_1043909413300031903RhizosphereMDPMYDLNSWSKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR
Ga0307412_1216819923300031911RhizosphereMANTCVCRPGFLRTVGAPALSKEKKSMDPMYDLLYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR
Ga0307409_10077690723300031995RhizosphereMANTCVCRPGFLRTVGAPALSKEKKSMDPMYDLHYWGKQRREEALREAQRRSLAKQGKGDRRTPFKLGGVGSALSGVLSLLR
Ga0307409_10134236523300031995RhizosphereMDPMYDLHYWGKQRRQEALREAQRRSVASQGKGDRRTPFKLDGVGSALSGVLSLLR
Ga0307409_10155009523300031995RhizosphereMDPMYDLNSWSKQRREEALREAQRRSLAKQGKGDRTTPFKLGGVGSALSNVLSLFT
Ga0308176_1241115513300031996SoilMDPMYDIHYWIKQRREEEIREAQRRSLAKRGKGDSRTPFKLVGVGSALSGVLGLLR
Ga0307416_10142322613300032002RhizosphereTVELRRKREEQIMDAMYDLYSWSKQRREEAMREAQRRSLAKQAKGDRGMRFELGRVGSALSGVLSLLR
Ga0307416_10244680123300032002RhizosphereMDAMYDLRSWSKQRREETLREAQRRSLAKQAKGDRGTRFELGRVGSALSGVLSLLR
Ga0307414_1202685123300032004RhizosphereERQSMDPMYDLHSWSKQRCEEAIREAQKRSLTKEAIREAQKRSLTKQAKGDRVTRFGLGRVGSALGAVLSLLR
Ga0307411_1145390713300032005RhizosphereMDPTMYDLHSWSKQRREEAMREVQRRSLSKRDKGDRVMRFEPGHVGSALSGVLSLLR
Ga0307415_10107817433300032126RhizosphereMDAMYDLYSWSKQRREEAMREAQRRSLAKQAKGDRGMHFELGRVGSALSGVLSLLR
Ga0307415_10127171323300032126RhizosphereMDAMYDLYSWSKQRREEAMREAQRRSLAKQAKGDRGMRFELGRVGSALSGVLSLLR
Ga0268251_1024642313300032159AgaveMDPMYEIHNWSKKRREEVIREAQRRSLAKQVKGDRSTPFKLGVVGSVFSSVLSLLR
Ga0268251_1037506213300032159AgaveTVGAPAVSKEKKSMDPMYDLHYWIKQRREEAIGEAQRRSLAKQGKGERKTPFKLGGVGSALSGVLSLFR
Ga0268251_1046534313300032159AgaveMDPMYDLDSWSKQRREEAIREAQRRSLAKQGKGDRRTLLFKLSGVGSALSGVLGPFR
Ga0268251_1047671023300032159AgaveMDPLYDIHSWSKQHREKALREAQRRSLTKQGKGDRRTPFKQGGVGYALSSVLSLLG


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