Metagenome Family F062234

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062234
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	40 residues
Representative Sequence	MRQWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Number of Associated Samples	86
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.73 %
% of genes near scaffold ends (potentially truncated)	10.69 %
% of genes from short scaffolds (< 2000 bps)	75.57 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.672 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (68.702 % of family members)
Environment Ontology (ENVO)	Unclassified (91.603 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (92.366 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 61.54% Coil/Unstructured: 38.46%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF04448	DUF551	19.08
PF13730	HTH_36	2.29
PF02592	Vut_1	1.53
PF06067	DUF932	1.53
PF04488	Gly_transf_sug	0.76
PF00929	RNase_T	0.76
PF07460	NUMOD3	0.76
PF13662	Toprim_4	0.76
PF13884	Peptidase_S74	0.76
PF03237	Terminase_6N	0.76
PF09250	Prim-Pol	0.76
PF06120	Phage_HK97_TLTM	0.76
PF13148	DUF3987	0.76
PF01464	SLT	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	1.53
COG3774	Mannosyltransferase OCH1 or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.76
COG5281	Phage-related minor tail protein	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
All Organisms	root	All Organisms	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Viruses	superkingdom	All Organisms → Viruses	23.66 %
cellular organisms	root	All Organisms → cellular organisms	23.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.66 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.14 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	19.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	19.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	14.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.05 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	19.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	14.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.76 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	18.32 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	12.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.53 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.76 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.76 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.76 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18.32 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	12.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.53 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.76 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.76 %
unclassified Leptospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → unclassified Leptospiraceae	0.76 %
Phaeobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter	0.76 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18.32 %
Hydrogenophaga intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	12.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.53 %
Paraburkholderia gardini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia gardini	0.76 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.76 %
Leptospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → unclassified Leptospiraceae → Leptospiraceae bacterium	0.76 %
Phaeobacter gallaeciensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter gallaeciensis	0.76 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.76 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.67 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18.32 %
Hydrogenophaga intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	12.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.05 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.53 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.76 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.76 %
Phaeobacter gallaeciensis DSM 26640	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter gallaeciensis → Phaeobacter gallaeciensis DSM 26640	0.76 %
Paraburkholderia gardini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia gardini	0.76 %
Leptospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → unclassified Leptospiraceae → Leptospiraceae bacterium	0.76 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000203\|TB18AUG2009E_c001021	Not Available	4974	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10083245	Not Available	1681	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10118566	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1238	Open in IMG/M
3300002092\|JGI24218J26658_1010598	Not Available	1525	Open in IMG/M
3300003375\|JGI26470J50227_1009360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2497	Open in IMG/M
3300003375\|JGI26470J50227_1055305	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	677	Open in IMG/M
3300003375\|JGI26470J50227_1068662	Not Available	571	Open in IMG/M
3300003375\|JGI26470J50227_1078971	Not Available	511	Open in IMG/M
3300003787\|Ga0007811_1002163	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	2629	Open in IMG/M
3300003787\|Ga0007811_1003743	Not Available	1838	Open in IMG/M
3300003789\|Ga0007835_1000282	Not Available	7216	Open in IMG/M
3300003789\|Ga0007835_1005132	Not Available	1331	Open in IMG/M
3300003789\|Ga0007835_1012197	Not Available	749	Open in IMG/M
3300003789\|Ga0007835_1021725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	522	Open in IMG/M
3300003789\|Ga0007835_1022386	Not Available	512	Open in IMG/M
3300003796\|Ga0007865_1016793	Not Available	694	Open in IMG/M
3300003798\|Ga0007842_1003522	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300003798\|Ga0007842_1010381	Not Available	615	Open in IMG/M
3300003812\|Ga0007861_1005216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	1293	Open in IMG/M
3300003820\|Ga0007863_1005399	Not Available	1389	Open in IMG/M
3300003823\|Ga0007875_1000578	All Organisms → cellular organisms → Bacteria → Proteobacteria	5354	Open in IMG/M
3300003823\|Ga0007875_1011195	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → unclassified Leptospiraceae → Leptospiraceae bacterium	1084	Open in IMG/M
3300003826\|Ga0007872_1011164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	859	Open in IMG/M
3300003852\|Ga0031655_10124725	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1018	Open in IMG/M
3300003852\|Ga0031655_10324624	Not Available	574	Open in IMG/M
3300003852\|Ga0031655_10329252	Not Available	569	Open in IMG/M
3300004685\|Ga0065177_1008407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1904	Open in IMG/M
3300004685\|Ga0065177_1059221	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300004692\|Ga0065171_1054291	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	639	Open in IMG/M
3300004694\|Ga0065170_1042809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	607	Open in IMG/M
3300004770\|Ga0007804_1044032	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300004771\|Ga0007797_1135170	Not Available	632	Open in IMG/M
3300004772\|Ga0007791_10027591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1973	Open in IMG/M
3300004773\|Ga0007795_10058441	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300004777\|Ga0007827_10037078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1157	Open in IMG/M
3300004806\|Ga0007854_10368934	Not Available	587	Open in IMG/M
3300004807\|Ga0007809_10004857	Not Available	5202	Open in IMG/M
3300004807\|Ga0007809_10036260	All Organisms → Viruses → Predicted Viral	1656	Open in IMG/M
3300004807\|Ga0007809_10048207	Not Available	1393	Open in IMG/M
3300004807\|Ga0007809_10135397	Not Available	733	Open in IMG/M
3300004807\|Ga0007809_10144299	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	705	Open in IMG/M
3300004807\|Ga0007809_10145257	Not Available	702	Open in IMG/M
3300004807\|Ga0007809_10215773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	551	Open in IMG/M
3300004807\|Ga0007809_10236614	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520	Open in IMG/M
3300006071\|Ga0007876_1071152	Not Available	920	Open in IMG/M
3300006071\|Ga0007876_1096895	Not Available	764	Open in IMG/M
3300006103\|Ga0007813_1041324	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	981	Open in IMG/M
3300006104\|Ga0007882_10147518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	833	Open in IMG/M
3300006104\|Ga0007882_10181285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	726	Open in IMG/M
3300006105\|Ga0007819_1008823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2633	Open in IMG/M
3300006105\|Ga0007819_1095514	Not Available	593	Open in IMG/M
3300006106\|Ga0007833_1042543	Not Available	840	Open in IMG/M
3300006106\|Ga0007833_1066431	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	650	Open in IMG/M
3300006107\|Ga0007836_1000087	Not Available	22202	Open in IMG/M
3300006108\|Ga0007862_1048522	Not Available	871	Open in IMG/M
3300006108\|Ga0007862_1071289	All Organisms → Viruses	679	Open in IMG/M
3300006112\|Ga0007857_1063559	Not Available	693	Open in IMG/M
3300006112\|Ga0007857_1079636	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	603	Open in IMG/M
3300006115\|Ga0007816_1097688	Not Available	645	Open in IMG/M
3300006119\|Ga0007866_1050312	Not Available	792	Open in IMG/M
3300006119\|Ga0007866_1100208	Not Available	532	Open in IMG/M
3300006126\|Ga0007855_1094503	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	623	Open in IMG/M
3300012006\|Ga0119955_1065672	Not Available	1088	Open in IMG/M
3300013093\|Ga0164296_1001478	Not Available	24898	Open in IMG/M
3300013093\|Ga0164296_1001615	Not Available	23481	Open in IMG/M
3300013093\|Ga0164296_1091843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1293	Open in IMG/M
3300013093\|Ga0164296_1302026	Not Available	599	Open in IMG/M
3300020704\|Ga0214250_1032505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	625	Open in IMG/M
3300020705\|Ga0214177_1001569	Not Available	4246	Open in IMG/M
3300020705\|Ga0214177_1001660	All Organisms → Viruses → Predicted Viral	4083	Open in IMG/M
3300020707\|Ga0214238_1007276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	1463	Open in IMG/M
3300020710\|Ga0214198_1045028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	522	Open in IMG/M
3300020711\|Ga0214237_1006997	Not Available	1672	Open in IMG/M
3300020716\|Ga0214207_1003086	Not Available	3054	Open in IMG/M
3300020716\|Ga0214207_1012301	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1109	Open in IMG/M
3300020722\|Ga0214245_1021033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Phaeobacter → Phaeobacter gallaeciensis → Phaeobacter gallaeciensis DSM 26640	933	Open in IMG/M
3300020724\|Ga0214244_1010084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	1431	Open in IMG/M
3300020727\|Ga0214246_1018874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	1176	Open in IMG/M
3300021127\|Ga0214193_1000797	Not Available	6431	Open in IMG/M
3300021131\|Ga0214206_1036368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	553	Open in IMG/M
3300021132\|Ga0214196_1019962	Not Available	974	Open in IMG/M
3300021135\|Ga0214247_1050996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	654	Open in IMG/M
3300021137\|Ga0214165_1002262	Not Available	9235	Open in IMG/M
3300021438\|Ga0213920_1015309	Not Available	2052	Open in IMG/M
3300022602\|Ga0248169_100587	Not Available	56793	Open in IMG/M
3300022602\|Ga0248169_109091	Not Available	8215	Open in IMG/M
3300023184\|Ga0214919_10592711	Not Available	656	Open in IMG/M
3300025328\|Ga0208384_102340	Not Available	921	Open in IMG/M
3300025336\|Ga0208619_108875	Not Available	733	Open in IMG/M
3300025340\|Ga0208866_1006069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	747	Open in IMG/M
3300025356\|Ga0208870_1012534	Not Available	1036	Open in IMG/M
3300025356\|Ga0208870_1029835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	623	Open in IMG/M
3300025357\|Ga0208383_1021437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	768	Open in IMG/M
3300025358\|Ga0208504_1003217	All Organisms → Viruses → Predicted Viral	2773	Open in IMG/M
3300025363\|Ga0208385_1000245	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11990	Open in IMG/M
3300025363\|Ga0208385_1004599	Not Available	2053	Open in IMG/M
3300025369\|Ga0208382_1021450	Not Available	866	Open in IMG/M
3300025369\|Ga0208382_1033417	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300025372\|Ga0207957_1019611	Not Available	825	Open in IMG/M
3300025379\|Ga0208738_1004114	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	2819	Open in IMG/M
3300025379\|Ga0208738_1036472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	734	Open in IMG/M
3300025382\|Ga0208256_1033653	Not Available	730	Open in IMG/M
3300025383\|Ga0208250_1001005	Not Available	7408	Open in IMG/M
3300025389\|Ga0208257_1000759	All Organisms → cellular organisms → Bacteria → Proteobacteria	8569	Open in IMG/M
3300025389\|Ga0208257_1049367	Not Available	593	Open in IMG/M
3300025390\|Ga0208743_1000039	Not Available	66188	Open in IMG/M
3300025391\|Ga0208740_1047860	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	593	Open in IMG/M
3300025398\|Ga0208251_1057949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	607	Open in IMG/M
3300025399\|Ga0208107_1091829	Not Available	501	Open in IMG/M
3300025400\|Ga0208387_1006422	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2476	Open in IMG/M
3300025401\|Ga0207955_1047095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	706	Open in IMG/M
3300025403\|Ga0208745_1070798	Not Available	511	Open in IMG/M
3300025410\|Ga0208875_1044497	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	705	Open in IMG/M
3300025411\|Ga0208865_1000090	Not Available	31722	Open in IMG/M
3300025420\|Ga0208111_1000059	Not Available	60576	Open in IMG/M
3300025429\|Ga0208500_1040026	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	560	Open in IMG/M
3300025466\|Ga0208497_1075378	Not Available	639	Open in IMG/M
3300025532\|Ga0208249_1142244	Not Available	515	Open in IMG/M
3300025578\|Ga0208864_1049609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia gardini	1103	Open in IMG/M
3300025598\|Ga0208379_1015773	Not Available	2188	Open in IMG/M
3300025598\|Ga0208379_1032905	Not Available	1410	Open in IMG/M
3300025598\|Ga0208379_1119508	Not Available	615	Open in IMG/M
3300027741\|Ga0209085_1012460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	4219	Open in IMG/M
3300027896\|Ga0209777_10092708	All Organisms → Viruses → Predicted Viral	2591	Open in IMG/M
3300027896\|Ga0209777_10595118	Not Available	801	Open in IMG/M
3300027896\|Ga0209777_11034141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	559	Open in IMG/M
3300027896\|Ga0209777_11121486	Not Available	530	Open in IMG/M
3300027896\|Ga0209777_11195414	Not Available	508	Open in IMG/M
3300028393\|Ga0304728_1226227	Not Available	637	Open in IMG/M
3300031759\|Ga0316219_1005773	Not Available	8563	Open in IMG/M
3300032562\|Ga0316226_1057578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	1978	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	91.60%
Lake	Environmental → Aquatic → Freshwater → Lake	7.63%
Creek	Environmental → Aquatic → Freshwater → Creek	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	69.47%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	9.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	7.63%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.87%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.11%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	68.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	9.16%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.87%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.34%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300003826	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jul08	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006107	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006126	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH01Aug08	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300020704	Freshwater microbial communities from Trout Bog Lake, WI - 29JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020705	Freshwater microbial communities from Trout Bog Lake, WI - 27AUG2007 epilimnion	Environmental	Open in IMG/M
3300020707	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020711	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 hypolimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020722	Freshwater microbial communities from Trout Bog Lake, WI - 23OCT2008 hypolimnion	Environmental	Open in IMG/M
3300020724	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021132	Freshwater microbial communities from Trout Bog Lake, WI - 25AUG2008 epilimnion	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025328	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025340	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025356	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025363	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH11Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025390	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025399	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025400	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025403	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025411	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025420	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025532	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M (SPAdes)	Environmental	Open in IMG/M
3300025578	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB18AUG2009E_0010219	3300000203	Freshwater	MRQWIVRHERDGDDIFALWENDNGDRWYVQVVINGEVQW*
TBL_comb47_HYPODRAFT_100832454	3300000553	Freshwater	MRQWIVRHERDGENVVALWENEDGDRWYVQVVINGEVQW*
TBL_comb47_HYPODRAFT_101185662	3300000553	Freshwater	MRKWIVRHERDGDNVVALWENDNGDRWYVQVVVNGEVQW*
JGI24218J26658_10105985	3300002092	Lentic	MRKWIVRHERDGDNIRALWENEDGHRWYVDVVINGEVEW*
JGI26470J50227_10093606	3300003375	Freshwater	MRQWIVRHERDGDNIRALWENEDGDRWYVQVVVNGEVQW*
JGI26470J50227_10553051	3300003375	Freshwater	MRKWIVRHERDGDTVMALWENEDGDRWYVQVVINGEVQW*
JGI26470J50227_10686623	3300003375	Freshwater	MRQWIVRHERDGDNMVALWENEDGDRWYVQVVINGEVQW*
JGI26470J50227_10789711	3300003375	Freshwater	MRQWIVRHERDGDNIRALWENEDGDRWYVQVVINGEVQW*
Ga0007811_10021638	3300003787	Freshwater	MRQWIVRHERDGDNISALWENDNGDRWYVQVVVNGEVQW*
Ga0007811_10037438	3300003787	Freshwater	MRQWIVRHERDGDNVVALWXNDNGDRWYVQIVINGEVQW*
Ga0007835_10002827	3300003789	Freshwater	MRKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW*
Ga0007835_10051324	3300003789	Freshwater	MRKWIVRHERDGDNISALWENEDGDRWYVQVVINGEVQW*
Ga0007835_10121973	3300003789	Freshwater	MRQWIVRHERDGDNIRALWENDSGDRWYVQVVINGEVQW*
Ga0007835_10217252	3300003789	Freshwater	MRKWIVRHERDGDDICALWENEDGDRWYVQVVINGEVQW*
Ga0007835_10223861	3300003789	Freshwater	MRQWIVRHERDGDNIRALWENDNGDRWYVQVVINGEVQW*
Ga0007865_10167932	3300003796	Freshwater	MRQWIVRHERDGDDICALWENEDGDRWYVQVVTNGEVQW*
Ga0007842_10035222	3300003798	Freshwater	MRQWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW*
Ga0007842_10103812	3300003798	Freshwater	MRQWIVRHERDGDDICALWESENGDRWYVQVVVNGEVQW*
Ga0007861_10052162	3300003812	Freshwater	MRKWIVRHERDGDNISALWENDNGDRWYVQIVINGEVQW*
Ga0007863_10053993	3300003820	Freshwater	MRQWIVRHERDGDNICALWENEDGDRWYVQVVINGEVQW*
Ga0007875_100057810	3300003823	Freshwater	MRKWIVRHERDGDNICALWENDSGDRWYVQVVINGEVQW*
Ga0007875_10111953	3300003823	Freshwater	MRQWIVRHERDGDNVMALWENEDGDRWYVQVVINGEVQW*
Ga0007872_10111644	3300003826	Freshwater	VQDNPLDAITGAAKMRKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW*
Ga0031655_101247255	3300003852	Freshwater Lake Sediment	MRQWVVRHERDGDNVVALWENDNGDRWYVQVVINGKVQW*
Ga0031655_103246241	3300003852	Freshwater Lake Sediment	MRQWIVRHERDGDNVVALWENDNGDRWYVXVVINGEVQW*
Ga0031655_103292522	3300003852	Freshwater Lake Sediment	MRQWIVRHERDGDNXXALWENEDGDRWYVQIVINGEVQW*
Ga0065177_10084074	3300004685	Freshwater	MRQWIVRHERDGDNICALWESDNGDRWYVQVVINGEVQW*
Ga0065177_10592211	3300004685	Freshwater	MRQWIVRHERDGDDICALWENEDGDRWYVQVMVNGEVQW*
Ga0065171_10542912	3300004692	Freshwater	MRQWIVRHERDGDNVVALWENDSGDRWYVQVVINGEVQW*
Ga0065170_10428093	3300004694	Freshwater	MRQWIVRHERDGDNVVALWENDNGDRWYVQVVINGKVQW*
Ga0007804_10440321	3300004770	Freshwater	MRKWIVRHERDGENVVALWENEDGNRWYVQVVINGEVQW*
Ga0007797_11351701	3300004771	Freshwater	MEERGSGAMRQWIVRHERDGDNIRALWENEDGDRWYVQVVVNGEVQW*
Ga0007791_100275913	3300004772	Freshwater	MRKWIVRHERDGDNVVALWENDNGDRWYVQVVINGKVQW*
Ga0007795_100584413	3300004773	Freshwater	MGNKMRQWIVRHERDGDNICALWENEDGDRWYVQVVINGEVQW*
Ga0007827_100370785	3300004777	Freshwater	MRQWIVRHERDGDDISALWENEDGDRWYVQVVINGEVQW*
Ga0007854_103689343	3300004806	Freshwater	MRQWIVRHERDGDNISALWENDSGDRWYVQVVINGEVQW*
Ga0007809_1000485714	3300004807	Freshwater	VEALEMRQWIVRHERDGDNICALWENDNGDRWYVQVMINGEVQW*
Ga0007809_100362603	3300004807	Freshwater	MEERGNGAMRQWIVRHERDGDDISALWENEDGDRWYVQVVINGEVQW*
Ga0007809_100482072	3300004807	Freshwater	MRQWIVRHERDGDNVMALWENEDGNRWYVQVVINGEVQW*
Ga0007809_101353972	3300004807	Freshwater	MRQWIVRHERDGDNICALWENDNGDRWYVQVVINGKVQW*
Ga0007809_101442993	3300004807	Freshwater	MRKWIVRHERDGDNVVALWENDSGDRWYVQVVVNGEVQW*
Ga0007809_101452572	3300004807	Freshwater	MRQWIVRHERDGDNISALWENDNGDRWYVQVVINGEVQW*
Ga0007809_102157731	3300004807	Freshwater	MRQWIVRHERDGDNICALWENEDGDRWYVQVMINGKVQW*
Ga0007809_102366143	3300004807	Freshwater	MRKWIVRHERDGDNVVALWENDNGDRWYVQVVINGEVQW*
Ga0007876_10711524	3300006071	Freshwater	MRKWIVRHERDGDNICALWENDNGDRWYVQIVINGEVQW*
Ga0007876_10968954	3300006071	Freshwater	WIVRHERDGDNVMALWENEDGDRWYVQVVINGEVQW*
Ga0007813_10413244	3300006103	Freshwater	NPLDAITGAAKMRKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW*
Ga0007882_101475184	3300006104	Freshwater	MRQWIVRHERDGDNVVALWENDNGDRWYVQIVINGEVQW*
Ga0007882_101812854	3300006104	Freshwater	MRKWIVRHERDGDNVVVLWENDNGDRWYMQVVVNGEVQW*
Ga0007819_10088231	3300006105	Freshwater	WIVRHERDGDNISALWENDNGDRWYVQIVINGEVQW*
Ga0007819_10955142	3300006105	Freshwater	MRQWIVRHELDGDNISALWENEDGDRWYVQVVINGEVQW*
Ga0007833_10425432	3300006106	Freshwater	MRQWIVRHERDGENVVALWENEDGNRWYVQVVINGEVQW*
Ga0007833_10664313	3300006106	Freshwater	MRQWIVRHERDGDNVVALWENDSGDRWYVQVVVNGEVQW*
Ga0007836_100008710	3300006107	Freshwater	MRQWIVRHERDGDNISALWENEDGDRWYVQVVINGEVQW*
Ga0007862_10485223	3300006108	Freshwater	MRQWIVRHERDGDNICALWENDNGDRWYVQVVINGEVQW*
Ga0007862_10712892	3300006108	Freshwater	MRQWIVRHERDGDNVVALWENDNGDRWYVQVVINGEVQW*
Ga0007857_10635592	3300006112	Freshwater	MKKWIVRHERDGDNISALWENDNGDRWYVQIVINGEVQW*
Ga0007857_10796363	3300006112	Freshwater	MRQWIVRHERDGDNVMALWENDSGDRWYVQVVVNGEVQW*
Ga0007816_10976883	3300006115	Freshwater	MRQWIVRHERDGDNVVALWENEDGDRWYVQVVVNGEVQW*
Ga0007866_10503121	3300006119	Freshwater	EMRQWIVRHERDGDNICALWENDNGDRWYVQVVINGKVQW*
Ga0007866_11002083	3300006119	Freshwater	MRQWIVRHERDGDNICALWENDNGDRWYVQVMINGEVQW*
Ga0007855_10945031	3300006126	Freshwater	WIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW*
Ga0119955_10656723	3300012006	Freshwater	MRQWIVRHERDGDNIRALWENEDGDRWYMQVVINGEVQW*
Ga0164296_100147836	3300013093	Freshwater	MRQWIVRHERDGDNVMALWENDDGDRWYVQVVINGEVQW*
Ga0164296_100161530	3300013093	Freshwater	MRQWIVRHERDGDNISALWESDNGDRWYVQVVINGEVQW*
Ga0164296_10918432	3300013093	Freshwater	MRQWIVRHERDGDNVVALWESDNGDRWYVQVVINGEVQW*
Ga0164296_13020263	3300013093	Freshwater	MRQWIVRHERDGDDICALWENDNGDRWYVQVVINGEVQW*
Ga0214250_10325052	3300020704	Freshwater	MKKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0214177_100156914	3300020705	Freshwater	MRQWIVRHERDGDNVMALWENEDGDRWYVQVVINGEVQW
Ga0214177_10016607	3300020705	Freshwater	MRKWIVRHERDGDNISALWENDNGDRWYVQIVINGEVQW
Ga0214238_10072764	3300020707	Freshwater	MRQWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0214198_10450283	3300020710	Freshwater	MRKWIVRHERDGDNVVALWENDSGDRWYVQVVVNGEVQW
Ga0214237_10069974	3300020711	Freshwater	MRQWIVRHERDGENVVALWENEDGDRWYVQVVINGEVQW
Ga0214207_10030862	3300020716	Freshwater	MRQWIVRHERDGDDIRALWENDNGDRWYVQVVVNGEVQW
Ga0214207_10123014	3300020716	Freshwater	MRQWIVRHERDGDDIFALWENDNGDRWYVQVVINGEVQW
Ga0214245_10210332	3300020722	Freshwater	MKKWIVRHERDGDNISALWENDNGDRWYVQIVINGEVQW
Ga0214244_10100843	3300020724	Freshwater	MRKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0214246_10188742	3300020727	Freshwater	MRKWIVRHERDGDNVVALWENDNGDRWYVQIVINGEVQW
Ga0214193_100079714	3300021127	Freshwater	MRQWIVRHERDGDNVMALWENDNGDRWYVQVVINGEVQW
Ga0214206_10363682	3300021131	Freshwater	MRQWIVRHERDGDNIRALWENDNGDRWYVQVVINGEVQW
Ga0214196_10199622	3300021132	Freshwater	MRKWIVRHERDGNNICALWENEDGDRWYVQVVINKEVQW
Ga0214247_10509963	3300021135	Freshwater	MRKWIVRHERDGDNVVALWENDNGDRWYVQVVVNGEVQW
Ga0214165_100226222	3300021137	Freshwater	MRKWIVRHERDGDTVMALWENEDGDRWYVQVVINGEVQ
Ga0213920_10153098	3300021438	Freshwater	MRQWIVRHERDGDNIRALWENEDGDRWYVQVVINGEVQW
Ga0248169_1005872	3300022602	Freshwater	MRQWIVRHERDGDNISALWESDNGDRWYVQVVINGEVQW
Ga0248169_1090912	3300022602	Freshwater	MRQWIVRHERDGDNISALWENDNGDRWYVQIVINGEVQW
Ga0214919_105927112	3300023184	Freshwater	MRQWIVRHEQDNDNVVALWENEDGDRWYMQVVINGEVQW
Ga0208384_1023404	3300025328	Freshwater	MRQWIVRHERDGDNIRALWENDSGDRWYVQVVINGEVQW
Ga0208619_1088751	3300025336	Freshwater	MEERGNGAMRQWIVRHERDGDDISALWENEDGDRWYVQVVINGEVQ
Ga0208866_10060694	3300025340	Freshwater	MRQWIVRHERDGDNVVALWENDSGDRWYVQVVVNGEVQW
Ga0208870_10125345	3300025356	Freshwater	MRQWIVRHERDGDDICALWESENGDRWYVQVVVNGEVQW
Ga0208870_10298351	3300025356	Freshwater	MRKWIVRHERDGDNISALWENDNGDRWYVQIVING
Ga0208383_10214372	3300025357	Freshwater	MRKWIVRHERDGDNVVVLWENDNGDRWYMQVVVNGEVQW
Ga0208504_100321710	3300025358	Freshwater	MRQWIVRHERDGDNVVALWENEDGDRWYVQIVINGEVQW
Ga0208385_10002452	3300025363	Freshwater	MRKWIVRHERDGDNISALWENEDGDRWYVQVVINGEVQW
Ga0208385_10045998	3300025363	Freshwater	MRQWIVRHERDGDNICALWENEDGDRWYVQIVVNGEVQW
Ga0208382_10214502	3300025369	Freshwater	MRQWIVRHERDGDNISALWENDSGDRWYVQVVINGEVQW
Ga0208382_10334173	3300025369	Freshwater	MRQWIVRHERDGDNVMALWENDSGDRWYVQVVVNGEVQW
Ga0207957_10196113	3300025372	Freshwater	MRQWIVRHERDGDNICALWENDNGDRWYVQVVINGKVQW
Ga0208738_10041144	3300025379	Freshwater	MRQWIVRHERDGDNISALWENDNGDRWYVQVVVNGEVQW
Ga0208738_10364722	3300025379	Freshwater	MRQWIVRHERDGDNVVALWENDNGDRWYVQIVINGEVQW
Ga0208256_10336532	3300025382	Freshwater	MRQWIVRHERDGDDISALWENEDGDRWYVQVVINGEVQW
Ga0208250_100100519	3300025383	Freshwater	MRKWIVRHERDGDNICALWENDSGDRWYVQVVINGEVQW
Ga0208257_100075924	3300025389	Freshwater	MRQWIVRHERDGDDICALWENEDGDRWYVQVVINGEVQW
Ga0208257_10493672	3300025389	Freshwater	MRQWIVRHERDGDNISALWENDNGDRWYVQVVINGEVQW
Ga0208743_100003980	3300025390	Freshwater	VEERGNGAMRKWIVRHERDGDNISALWENEDGDRWYVQVVINGEVQW
Ga0208740_10478601	3300025391	Freshwater	VQDNPLDAITGAAKMRKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0208251_10579493	3300025398	Freshwater	MRKWIVRHERDGENVVALWENEDGNRWYVQVVINGEVQW
Ga0208107_10918292	3300025399	Freshwater	VVEALEMRQWIVRHERDGDNISALWENEDGDRWYVQVVINGEVQW
Ga0208387_10064229	3300025400	Freshwater	MRQWIVRHERDGDDICALWENEDGDRWYVQVVTNGEVQW
Ga0207955_10470951	3300025401	Freshwater	DNPLDAITGAAKMRKWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0208745_10707982	3300025403	Freshwater	MEERGNGAMRQWIVRHERDGDDISALWENEDGDRWYVQV
Ga0208875_10444972	3300025410	Freshwater	MEERGSGAMRQWIVRHERDGDNVMALWENDSGDRWYVQVVVNGEVQW
Ga0208865_100009020	3300025411	Freshwater	MRKWIVRHERDGDNICALWENDNGDRWYVQIVINGEVQW
Ga0208111_100005985	3300025420	Freshwater	MEERGNGAMRQWIVRHERDGDNICALWENEDGDRWYVQIVVNGEVQW
Ga0208500_10400263	3300025429	Freshwater	QWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0208497_10753782	3300025466	Freshwater	VVEALEMRQWIVRHERDGDDICALWENEDGDRWYVQVMVNGEVQW
Ga0208249_11422442	3300025532	Freshwater	MRQWIVRHERDGDNICALWENEDGDRWYVQVVINGEVQW
Ga0208864_10496094	3300025578	Freshwater	MRKWIVRHERDGDNVVALWENDNGDRWYVQVVINGKVQW
Ga0208379_10157739	3300025598	Freshwater	MRQWIVRHERDGDNICALWENDNGDRWYVQVMINGEVQW
Ga0208379_10329051	3300025598	Freshwater	KWIVRHERDGDNVVALWENDSGDRWYVQVVVNGEVQW
Ga0208379_11195083	3300025598	Freshwater	MRQWIVRHERDGDNVMALWENEDGNRWYVQVVINGEVQW
Ga0209085_10124602	3300027741	Freshwater Lake	LDAITGAAKMRQWIVRHERDGDNVVALWENEDGDRWYVQVVINGEVQW
Ga0209777_100927083	3300027896	Freshwater Lake Sediment	MRQWIVRHERDGDNVVALWEDDDGHRWYEHIVIDGEVQW
Ga0209777_105951182	3300027896	Freshwater Lake Sediment	MRQWIVRHERDGDNIRALWENDNGDRWYVQVVVNGEVQW
Ga0209777_110341412	3300027896	Freshwater Lake Sediment	MRQWIVRHERDGDNVVALWENDSGDRWYVQIVINGEVQW
Ga0209777_111214863	3300027896	Freshwater Lake Sediment	MRQWIVRHERDGDDIRALWENENGDRWYVQVVINGKVQW
Ga0209777_111954141	3300027896	Freshwater Lake Sediment	MRQWIVRHERDGDDIFALWENDNGDRWYVQVVINGE
Ga0304728_12262272	3300028393	Freshwater Lake	MRQWIVRHERDGDNVVVLWENDNGDRWYVQVVINGEVQW
Ga0316219_100577311	3300031759	Freshwater	MRQWIVRHERDGDNISALWENEDGDRWYEHIVVNGEVIW
Ga0316226_10575788	3300032562	Freshwater	MRQWIVRHERDGDNVVALWESDNGDRWYVQVVINGEVQW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences