Metagenome / Metatranscriptome Family F062224

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062224
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	67 residues
Representative Sequence	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAY
Number of Associated Samples	111
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.08 %
% of genes near scaffold ends (potentially truncated)	87.79 %
% of genes from short scaffolds (< 2000 bps)	96.18 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (61.069 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.405 % of family members)
Environment Ontology (ENVO)	Unclassified (32.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.382 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.48% β-sheet: 0.00% Coil/Unstructured: 56.52%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03928	HbpS-like	3.05
PF00589	Phage_integrase	2.29
PF13531	SBP_bac_11	1.53
PF07969	Amidohydro_3	1.53
PF00313	CSD	0.76
PF00501	AMP-binding	0.76
PF04226	Transgly_assoc	0.76
PF00196	GerE	0.76
PF01070	FMN_dh	0.76
PF13177	DNA_pol3_delta2	0.76
PF05598	DUF772	0.76
PF01527	HTH_Tnp_1	0.76
PF07676	PD40	0.76
PF03466	LysR_substrate	0.76
PF00155	Aminotran_1_2	0.76
PF13683	rve_3	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.76
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.76
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
All Organisms	root	All Organisms	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
cellular organisms	root	All Organisms → cellular organisms	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	14.50 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	6.11 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	3.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.50 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	6.11 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	3.05 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.50 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.11 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	2.29 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.50 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.11 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	2.29 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.50 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.11 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	1.53 %
Novosphingobium sp. 9U	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. 9U	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Novosphingobium sp. PP1Y	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	0.76 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.50 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.11 %
Nocardia sp. BMG111209	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	1.53 %
Novosphingobium sp. 9U	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. 9U	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Novosphingobium sp. PP1Y	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	0.76 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118322197	Not Available	548	Open in IMG/M
3300003219\|JGI26341J46601_10116226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	768	Open in IMG/M
3300004268\|Ga0066398_10109100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	652	Open in IMG/M
3300005177\|Ga0066690_10692238	Not Available	675	Open in IMG/M
3300005332\|Ga0066388_106982699	Not Available	568	Open in IMG/M
3300005338\|Ga0068868_101138949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300005434\|Ga0070709_11675762	Not Available	519	Open in IMG/M
3300005435\|Ga0070714_101470016	Not Available	665	Open in IMG/M
3300005436\|Ga0070713_101354753	Not Available	690	Open in IMG/M
3300005437\|Ga0070710_10567792	Not Available	785	Open in IMG/M
3300005440\|Ga0070705_101721962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	530	Open in IMG/M
3300005454\|Ga0066687_10710819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300005536\|Ga0070697_101955317	Not Available	525	Open in IMG/M
3300005547\|Ga0070693_100460149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300005553\|Ga0066695_10667462	Not Available	614	Open in IMG/M
3300005610\|Ga0070763_10380389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300005764\|Ga0066903_105850350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	645	Open in IMG/M
3300005921\|Ga0070766_10495113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300006028\|Ga0070717_11746167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	563	Open in IMG/M
3300006028\|Ga0070717_12014825	Not Available	520	Open in IMG/M
3300006163\|Ga0070715_10271043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300006172\|Ga0075018_10394479	Not Available	702	Open in IMG/M
3300006176\|Ga0070765_101077097	Not Available	759	Open in IMG/M
3300009012\|Ga0066710_103499857	Not Available	594	Open in IMG/M
3300009038\|Ga0099829_10598595	Not Available	916	Open in IMG/M
3300009137\|Ga0066709_100595887	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300009553\|Ga0105249_12225774	Not Available	621	Open in IMG/M
3300009792\|Ga0126374_10905541	Not Available	684	Open in IMG/M
3300010154\|Ga0127503_11312917	Not Available	549	Open in IMG/M
3300010325\|Ga0134064_10508398	Not Available	501	Open in IMG/M
3300010361\|Ga0126378_10905409	Not Available	988	Open in IMG/M
3300010366\|Ga0126379_10859002	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300010376\|Ga0126381_103218785	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300011120\|Ga0150983_16031180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300011271\|Ga0137393_11082751	Not Available	681	Open in IMG/M
3300012202\|Ga0137363_11042236	Not Available	695	Open in IMG/M
3300012203\|Ga0137399_11778083	Not Available	505	Open in IMG/M
3300012205\|Ga0137362_10137378	Not Available	2083	Open in IMG/M
3300012356\|Ga0137371_10718123	Not Available	764	Open in IMG/M
3300012362\|Ga0137361_11634830	Not Available	565	Open in IMG/M
3300012363\|Ga0137390_11277344	Not Available	680	Open in IMG/M
3300012582\|Ga0137358_10884801	Not Available	587	Open in IMG/M
3300012683\|Ga0137398_11216577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300012917\|Ga0137395_10898203	Not Available	640	Open in IMG/M
3300012922\|Ga0137394_11206868	Not Available	620	Open in IMG/M
3300012948\|Ga0126375_11934063	Not Available	519	Open in IMG/M
3300012971\|Ga0126369_10465502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1316	Open in IMG/M
3300014745\|Ga0157377_10668400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300015241\|Ga0137418_10282461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1395	Open in IMG/M
3300016319\|Ga0182033_11036148	Not Available	731	Open in IMG/M
3300016371\|Ga0182034_10218712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1484	Open in IMG/M
3300016371\|Ga0182034_11508176	Not Available	589	Open in IMG/M
3300016404\|Ga0182037_10228943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1459	Open in IMG/M
3300016422\|Ga0182039_10575414	Not Available	982	Open in IMG/M
3300016445\|Ga0182038_10301185	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300018466\|Ga0190268_11290535	Not Available	615	Open in IMG/M
3300018946\|Ga0193599_1231551	Not Available	567	Open in IMG/M
3300020579\|Ga0210407_11132776	Not Available	592	Open in IMG/M
3300020579\|Ga0210407_11146985	Not Available	587	Open in IMG/M
3300020580\|Ga0210403_10006471	All Organisms → cellular organisms → Bacteria	9813	Open in IMG/M
3300020580\|Ga0210403_10746150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300020580\|Ga0210403_11320980	Not Available	550	Open in IMG/M
3300020581\|Ga0210399_11219639	Not Available	596	Open in IMG/M
3300020581\|Ga0210399_11238445	Not Available	591	Open in IMG/M
3300021168\|Ga0210406_10869917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300021168\|Ga0210406_10901676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300021178\|Ga0210408_11087834	Not Available	615	Open in IMG/M
3300021180\|Ga0210396_11672761	Not Available	518	Open in IMG/M
3300021181\|Ga0210388_10604453	Not Available	959	Open in IMG/M
3300021402\|Ga0210385_11112607	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300021403\|Ga0210397_11425105	Not Available	538	Open in IMG/M
3300021403\|Ga0210397_11623910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300021479\|Ga0210410_10426805	Not Available	1186	Open in IMG/M
3300021560\|Ga0126371_10271635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1816	Open in IMG/M
3300021560\|Ga0126371_10642666	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300021560\|Ga0126371_13552318	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300022508\|Ga0222728_1035947	Not Available	786	Open in IMG/M
3300025916\|Ga0207663_11441195	Not Available	555	Open in IMG/M
3300026078\|Ga0207702_11667678	Not Available	630	Open in IMG/M
3300026376\|Ga0257167_1085405	Not Available	501	Open in IMG/M
3300026557\|Ga0179587_10328214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300026557\|Ga0179587_10945897	Not Available	568	Open in IMG/M
3300026998\|Ga0208369_1016855	Not Available	696	Open in IMG/M
3300027069\|Ga0208859_1023907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300027070\|Ga0208365_1001937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2303	Open in IMG/M
3300027824\|Ga0209040_10132878	Not Available	1365	Open in IMG/M
3300027874\|Ga0209465_10597686	Not Available	547	Open in IMG/M
3300027903\|Ga0209488_10383158	Not Available	1042	Open in IMG/M
3300028047\|Ga0209526_10081372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2281	Open in IMG/M
3300028906\|Ga0308309_11895851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300029636\|Ga0222749_10648874	Not Available	577	Open in IMG/M
3300031544\|Ga0318534_10333839	Not Available	873	Open in IMG/M
3300031544\|Ga0318534_10839926	Not Available	515	Open in IMG/M
3300031545\|Ga0318541_10103967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1527	Open in IMG/M
3300031561\|Ga0318528_10575034	Not Available	604	Open in IMG/M
3300031573\|Ga0310915_10184969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1452	Open in IMG/M
3300031573\|Ga0310915_11102966	Not Available	551	Open in IMG/M
3300031640\|Ga0318555_10315513	Not Available	846	Open in IMG/M
3300031668\|Ga0318542_10135180	Not Available	1215	Open in IMG/M
3300031679\|Ga0318561_10110322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1453	Open in IMG/M
3300031679\|Ga0318561_10209731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1057	Open in IMG/M
3300031744\|Ga0306918_10430238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. 9U	1030	Open in IMG/M
3300031753\|Ga0307477_10253246	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300031763\|Ga0318537_10063743	Not Available	1347	Open in IMG/M
3300031765\|Ga0318554_10570223	Not Available	639	Open in IMG/M
3300031768\|Ga0318509_10232045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1029	Open in IMG/M
3300031770\|Ga0318521_10120769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1464	Open in IMG/M
3300031770\|Ga0318521_10421939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. 9U	796	Open in IMG/M
3300031770\|Ga0318521_10648747	Not Available	640	Open in IMG/M
3300031832\|Ga0318499_10226764	Not Available	727	Open in IMG/M
3300031890\|Ga0306925_12013413	Not Available	544	Open in IMG/M
3300031893\|Ga0318536_10107067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1405	Open in IMG/M
3300031897\|Ga0318520_10982233	Not Available	533	Open in IMG/M
3300031910\|Ga0306923_10441870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1476	Open in IMG/M
3300031910\|Ga0306923_10728650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1101	Open in IMG/M
3300031910\|Ga0306923_11263003	Not Available	786	Open in IMG/M
3300031912\|Ga0306921_10392871	Not Available	1619	Open in IMG/M
3300031945\|Ga0310913_10180813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1468	Open in IMG/M
3300031947\|Ga0310909_11094904	Not Available	648	Open in IMG/M
3300031981\|Ga0318531_10533969	Not Available	531	Open in IMG/M
3300032039\|Ga0318559_10257024	Not Available	808	Open in IMG/M
3300032043\|Ga0318556_10388841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300032064\|Ga0318510_10091189	Not Available	1147	Open in IMG/M
3300032076\|Ga0306924_10971271	Not Available	934	Open in IMG/M
3300032090\|Ga0318518_10669647	Not Available	528	Open in IMG/M
3300032091\|Ga0318577_10214148	Not Available	922	Open in IMG/M
3300032180\|Ga0307471_102981870	Not Available	601	Open in IMG/M
3300033290\|Ga0318519_10118419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1447	Open in IMG/M
3300033290\|Ga0318519_10501542	Not Available	731	Open in IMG/M
3300033290\|Ga0318519_10984574	Not Available	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.95%
Host-Associated	Host-Associated	3.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.89%
Aquatic	Environmental → Aquatic	3.05%
Plants	Host-Associated → Plants	3.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.89%
Freshwater	Environmental → Aquatic → Freshwater	2.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.53%
Sediment	Environmental → Aquatic → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.05%
Loam	Environmental → Terrestrial → Soil → Loam	19.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1183221971	3300002568	Soil	MPRNAIAEIAKLIGRELESGAAPSEGALATGPMLAEAGATNEVAERLFAEAHRKRPNY
JGI26341J46601_101162261	3300003219	Bog Forest Soil	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAMLAEAGAPTEIVGRLLAEAHRKRPNERMVHAYAFM
Ga0066398_101091001	3300004268	Tropical Forest Soil	MMPRTAIAQIAKIIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEARRKRPHDRMIAGYSFMLEGALGTLRLQS
Ga0066690_106922382	3300005177	Soil	MPLTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRP
Ga0066675_113264241	3300005187	Soil	MIPQTAIVQIAKRIGRELNSGAEPSEDALAAGPTLAEAGATREIVGRLLAEA
Ga0066388_1069826992	3300005332	Tropical Forest Soil	MMPRTAMTEIAKVIGQELNDGVGPSEEALTAGPILADAGATTEIIASLLAEARRKRPDDRMIA
Ga0068868_1011389491	3300005338	Miscanthus Rhizosphere	MSRTAIAQIAKLMGRDLESGTGPSEEALATVPILAEAGATTEILDRLFAEGRRKRPNNRMIQAYAFMLEG
Ga0070709_116757621	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTAITQLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAF
Ga0070714_1014700162	3300005435	Agricultural Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHAN
Ga0070713_1013547532	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQRTAIAQLAKLIGQELESRAGPSEQALSTGPMLAEAGATIEIVERLLAEAQRKRPNDRMIQAY
Ga0070710_105677922	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTAIAQIAKLIGQELESGAEPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPN
Ga0070705_1017219621	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSRTAIAQIAKLMGRDLESGTGPSEEALGTGPILAEAGGTTEIVDRLFAEGRRKRPNNRMIQAYAFMLEGALGELRLH
Ga0066687_107108191	3300005454	Soil	MPRTAIAQLAKLIGQELESGVGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE*
Ga0070697_1019553171	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMMQAYAFILEE
Ga0070693_1004601491	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSRTAIAQIAKLIGRDLESGTGPSEEALATGPILAEAGATTEIVDRLFAEARRKRPN
Ga0066695_106674621	3300005553	Soil	MIPQTAIVQIAKRIGRELNPGAEPSEDALAAGPTLAEAGATREIVGRLLAEAHRTRPSDRMIHAYAFM
Ga0070763_103803892	3300005610	Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE*
Ga0066903_1058503501	3300005764	Tropical Forest Soil	MTPRTAITQIAKTIGQELESGAGPSKEALAAGPMLAEAGATTELVGRLLAEARRKRPNN
Ga0070766_104951131	3300005921	Soil	MPRTAITQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE*
Ga0070717_117461671	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTTIAQIANMIGRELDSGARPSEEAVAAGPLLAEAGATAAIVGWLLAEAHRKRPDD
Ga0070717_120148251	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDA
Ga0070715_102710431	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLH
Ga0075018_103944791	3300006172	Watersheds	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLR
Ga0070765_1010770971	3300006176	Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKARMTG*
Ga0066710_1034998571	3300009012	Grasslands Soil	MPRTAIAQIAELIGQELESGAGPSERALATGPMLADAGATSEIVERLFAEAQRKRPNDRM
Ga0099829_105985951	3300009038	Vadose Zone Soil	MIPRTAITQIAKKIGRELNSGAEPREEALAAGPILTEAGATPEIVGRLLAEAQRNRPNDRMIHAYAF
Ga0066709_1005958872	3300009137	Grasslands Soil	MMPRTAITQIAKIIGRELESDAGPSEEALAAGAILAEAGATTEIVGRLLAEAHRKRPNE
Ga0105249_122257741	3300009553	Switchgrass Rhizosphere	MAGSEEPKTMSRTAIAQIAKLMGRDLESGTGPSEEALGTGPILAEAGGTTEIVDRLFAEG
Ga0126374_109055411	3300009792	Tropical Forest Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIDAYAFMLE
Ga0127503_113129171	3300010154	Soil	MPRTAITQLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNERMIQAY
Ga0134064_105083981	3300010325	Grasslands Soil	MIPRTPIAEIAKLIGRELESGAAPSEGALATGPMLAEAGATKEIAERLFAEAHRKRPNYRMIEAYAFMLEG
Ga0126378_109054092	3300010361	Tropical Forest Soil	MMPKVAIAQIAKLIGRELESGAGPSEGALATGPILGEAGATNEIAEQLFAEATGSARIIA
Ga0126379_108590022	3300010366	Tropical Forest Soil	MTLSMMPKVAIAQIAKLIGRELESGAGPSEEALATGPILGEAGATNEIAERLFAEAHRKRPNNRMIEAYAFILE*
Ga0126381_1032187852	3300010376	Tropical Forest Soil	VRHIFAKAALTSPAQMTLSMMPKVVIAQIAKLIGRELESGAGPSEEALATGPILGEAGATNEIAERLFAEAHRKRPNNRMIEAYAFMLE*
Ga0150983_160311801	3300011120	Forest Soil	MPRTAIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPG*
Ga0137393_110827511	3300011271	Vadose Zone Soil	MMPRIAITQIARMIGRELESDAGPSGEALAAGAILAEAGATTEIVGRLLAEAHRKRPNERMVRAYAFMLEAALGTL
Ga0137363_110422361	3300012202	Vadose Zone Soil	MIPRTAIAQIAKKIGRELNSGAEPSEEALATGPILAEAGATPEIVGRLFAEAQRNRRNDRMIHTYAFMLEG
Ga0137399_117780831	3300012203	Vadose Zone Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALATGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHAYAFMLEGALGTLRVQAS
Ga0137362_101373783	3300012205	Vadose Zone Soil	MIPQTAIVQIAKKIGRELNPGGPSEDALAAGPILAEAGGTPEIVGQLLAEAQRHRPNDRMIQAHAFMLEGALGTDG*
Ga0137371_107181231	3300012356	Vadose Zone Soil	MIPQTAIVQIAKRIGRELNSGAEPSEDALAAGPTLAEAGATREIVGRLLAEAHRTRPS
Ga0137361_116348301	3300012362	Vadose Zone Soil	MMPRIAITQIARMIGRELESDAGPSGEALAAGAILAEAGATTEIVGRLLAEAHRKRPN
Ga0137390_112773441	3300012363	Vadose Zone Soil	MIPQTAIAQIAKKIARELNSGAELSEEALAAGPILAEAGATTEIVGRLFAEARRKRPNDRMIHAYAAITFSRAFKF
Ga0137358_108848012	3300012582	Vadose Zone Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHA
Ga0137398_112165771	3300012683	Vadose Zone Soil	MPRTAIAQIAKLIGQELKSGAGPSEQALATGPMLAEADATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLR
Ga0137395_108982031	3300012917	Vadose Zone Soil	RMIPRTAIVQIAKKIGRELNSGAKPSEEALAAGPILAEAGATPEIVGQLLAEAQRHRPNDRMIQAHAFMLEGALGTDG*
Ga0137394_112068681	3300012922	Vadose Zone Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGATPEIVGRLLAEAQRNRPNDRMIHAYAFMLEGALG
Ga0126375_119340631	3300012948	Tropical Forest Soil	MMPRTAIAQIAKIIGRELDTGAGPSEEALAAGPTLAEAGAATEIAGSLLAEARRKRPDDRMI
Ga0126369_104655021	3300012971	Tropical Forest Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGAMLAEAGATTELVGQLLAEARRKRPNHRMIDAYA
Ga0157377_106684001	3300014745	Miscanthus Rhizosphere	MAGSEELKTMSRTAIAQIAKLIGRDLESGTGPSEEALATGPILAEAGATTEIVDRLFAEGRRKRPNDRMIQAYAFMLEG
Ga0137418_102824612	3300015241	Vadose Zone Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALATGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHAYAFMLEGA
Ga0182033_110361482	3300016319	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIEAYAFMLEAALE
Ga0182034_102187122	3300016371	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVA
Ga0182034_115081761	3300016371	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMID
Ga0182037_102289432	3300016404	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGY
Ga0182039_105754141	3300016422	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGA
Ga0182038_103011853	3300016445	Soil	MPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGY
Ga0190268_112905352	3300018466	Soil	MTPRTAIARIAKTIGRELEADTGPSEGGWAAGSMLAEAGATTEVAACLLAEARRKRPDGRLVTGCAF
Ga0193599_12315512	3300018946	Soil	MTPRTAIARIAKTIGRELEADIGPSESGWAAGSMLAEAGATAEIAACLLAEARRKRPDDRLINGCAF
Ga0210407_111327761	3300020579	Soil	MIPRTAIVQIAKKIGRELNSGAEASEDALAAGPILAEAGVTPEIVGQLLAEAQRNHPNDRMIHA
Ga0210407_111469851	3300020579	Soil	MIPQTAIVQIAKRIGRKLNSGAEPSEDALAAGPILAEAGATPEIVGQLLAEAHRKRPNDRMIQAYAFMLEGALG
Ga0210403_1000647117	3300020580	Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPILAEAGATTEIVERLFAEAQRKRPN
Ga0210403_107461501	3300020580	Soil	RADDGWDEPRTMPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE
Ga0210403_113209801	3300020580	Soil	MPRTAITQLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGA
Ga0210399_112196391	3300020581	Soil	MPRTAITQLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQA
Ga0210399_112384451	3300020581	Soil	MTPRTAIPQIAEMIGRELDSGAEPSEEALAAGPILAEAGATPEIVRRLFAEAQRNRRNDRMIHAYAFMLEGALGTLRV
Ga0210406_108699171	3300021168	Soil	MPRTAIAQIAKLIGEELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE
Ga0210406_109016761	3300021168	Soil	MSRTAIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDR
Ga0210408_110878341	3300021178	Soil	MIPRTAIPQIAEMIGRELDSGAEPSEEALAAGPILAAAGATPEIVRRLFAEAQRNRRNDRMIHAYAFMLEGALGTLRV
Ga0210396_116727611	3300021180	Soil	MPRTAITQLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLFAEARRKRPND
Ga0210388_106044531	3300021181	Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPILAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE
Ga0210385_111126071	3300021402	Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQ
Ga0210397_114251051	3300021403	Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQLKRPNDLM
Ga0210397_116239102	3300021403	Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE
Ga0210410_104268052	3300021479	Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHAYAFMLE
Ga0126371_102716353	3300021560	Tropical Forest Soil	MMPRTTIAKIAKMIDRELDSGVELSEEALAAGPILAEGGATAEIVRRLLAEAHRSHPDDGMISAYAFLLE
Ga0126371_106426663	3300021560	Tropical Forest Soil	VRNIFAKAALTSPAQMTLSMMPKVVIAQIAKLIGRELESGAGPSEEALATGPILGEAVATNEIAEQLFAEAHRKRPN
Ga0126371_135523182	3300021560	Tropical Forest Soil	MTLSMMPKVAIAQIAKLIGRELESGAGPSEEALATGPILGEAGATNEIAERLFAEAHRKRPNNRMIEAYAFILE
Ga0222728_10359471	3300022508	Soil	MPRTAITQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNHL
Ga0207663_114411951	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPLTAIAQIAKLIGQELESGAGPSEQALATGPCGRRGATTEIVERLFAEAQRKRPNGRMIQADSSKRPE
Ga0207702_116676781	3300026078	Corn Rhizosphere	MSRTAIAQIAKLMGRDLESGTGPSEEALGTGPILAEAGGTTEIVDRLFAEGRRKRPNNRMIQAYAFMLEGA
Ga0257167_10854051	3300026376	Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALATGPILAEAGATPEIVGRLFAEAQRDRPSDRMIHAYAFMLEGALGTL
Ga0179587_103282142	3300026557	Vadose Zone Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPSDRM
Ga0179587_109458971	3300026557	Vadose Zone Soil	MIPRTAIVQIAKKIGRELNSGAEASEDALAAGPILAEAGVTPEIVGQLLAEAQRNHPNDRMIHAYAFMLEERCG
Ga0208369_10168551	3300026998	Forest Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETL
Ga0208859_10239071	3300027069	Forest Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDGMIQ
Ga0208365_10019373	3300027070	Forest Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYSIKRPE
Ga0209040_101328781	3300027824	Bog Forest Soil	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAMLAEAGAPTEIVGRLLAEAHRKRPNERMVHAYAFML
Ga0209465_105976861	3300027874	Tropical Forest Soil	MKPRTTIAQIAKMIGRELDSGVRLSAEALAAGPILAEGGATAEIVGCLLAEAHRTHPQDR
Ga0209488_103831581	3300027903	Vadose Zone Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHTYAFMLEMPSERCGCR
Ga0209526_100813721	3300028047	Forest Soil	MIPRTAIAQIAKEIGRELNSGAQPSEEALAIGPILAEAGATPEIVGRLFAEAQRNRRNDRMH
Ga0308309_118958511	3300028906	Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAY
Ga0222749_106488741	3300029636	Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLM
Ga0318534_103338392	3300031544	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLE
Ga0318534_108399261	3300031544	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVDRLLAEARRKRPNNRMIEAYAFM
Ga0318541_101039672	3300031545	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAH
Ga0318528_105750341	3300031561	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGAL
Ga0310915_101849692	3300031573	Soil	MMPPQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKRPD
Ga0310915_111029661	3300031573	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTVLVGRLLAEARRKRPNDRMIDAYAFML
Ga0318555_103155131	3300031640	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYIF
Ga0318542_101351801	3300031668	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQ
Ga0318561_101103223	3300031679	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPD
Ga0318561_102097311	3300031679	Soil	MPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKRPNDRIIAGYT
Ga0306918_104302381	3300031744	Soil	MMPPQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKR
Ga0307477_102532461	3300031753	Hardwood Forest Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMMQAYAFILE
Ga0318537_100637431	3300031763	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVCQLLAEARRKRPNHRMI
Ga0318554_105702231	3300031765	Soil	MMPRTAITHIAKSIGRELDTGVGPSEEALAAGPILAEAGATTEIVGSLLAEVHRKRPDDRMISGYTFI
Ga0318509_102320451	3300031768	Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKRPNDRIIAG
Ga0318521_101207692	3300031770	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEVHRKRPDDRMVAGYSFLLE
Ga0318521_104219391	3300031770	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDR
Ga0318521_106487471	3300031770	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQ
Ga0318499_102267641	3300031832	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYA
Ga0306925_120134131	3300031890	Soil	MMPRTAITHIAKSIGRELDTGVRPSEEALAAGPILAEAGATTEIVGSLLAEAHRKRRDDRMISGYTFILEGALAT
Ga0318536_101070671	3300031893	Soil	MMPPQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAE
Ga0318520_109822331	3300031897	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMVEAYAFM
Ga0306923_104418701	3300031910	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEVHRKRPDD
Ga0306923_107286502	3300031910	Soil	MMPRTAITHIAESIGRELDTGVGPSEEALAAGPILAKAGATSEIVGSLLAEAHRKRPDDRMLSGYTFILEGA
Ga0306923_112630031	3300031910	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVRRLLTEARRKRPSD
Ga0306921_103928714	3300031912	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGY
Ga0310913_101808134	3300031945	Soil	MPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKR
Ga0310909_110949041	3300031947	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDR
Ga0318531_105339692	3300031981	Soil	MMLRTAITHIAKSIGRELDTGVGPSEEALAAGPILAEAGATMEIVGSLLAEAHRKRPDDRMISGYTF
Ga0318559_102570241	3300032039	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYS
Ga0318556_103888412	3300032043	Soil	MTPRTAIAQIAKMIGRELDTGAGPSEEALAAGSILADAGATTEIIASLLAEARRKRPEDRMIAGYT
Ga0318510_100911891	3300032064	Soil	MMPPQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEVHRKRPDDRMVAGYSFLLE
Ga0306924_109712712	3300032076	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFL
Ga0318518_106696471	3300032090	Soil	MTPRTAITQIAKMIGRELESGSGPSEGALAAGAMLAEAGATTELVGRLLAEARRKRPNNRIID
Ga0318577_102141482	3300032091	Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKRPNDRIIAGYTFMLEGALG
Ga0307471_1029818701	3300032180	Hardwood Forest Soil	MPRIAITQLAKLIGQELESRVGPSEQALATGPMLAEADATTEIVERLFAEAQRKRPNDRMIQ
Ga0318519_101184192	3300033290	Soil	MMPPQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAG
Ga0318519_105015422	3300033290	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIEAY
Ga0318519_109845742	3300033290	Soil	MMPRTAITHIAKSIGRELDTGVGPSEEALAAGPILAEAGATTEIVGSLLAEAHRKRPDDRMISGYT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences