Metagenome / Metatranscriptome Family F062194

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062194
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	110 residues
Representative Sequence	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Number of Associated Samples	101
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.52 %
% of genes near scaffold ends (potentially truncated)	38.93 %
% of genes from short scaffolds (< 2000 bps)	81.68 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.145 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.794 % of family members)
Environment Ontology (ENVO)	Unclassified (41.985 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.122 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.17% β-sheet: 0.00% Coil/Unstructured: 28.83%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF04545	Sigma70_r4	6.87
PF06271	RDD	6.11
PF09339	HTH_IclR	2.29
PF00196	GerE	1.53
PF08447	PAS_3	1.53
PF01408	GFO_IDH_MocA	0.76
PF02780	Transketolase_C	0.76
PF06114	Peptidase_M78	0.76
PF13754	Big_3_4	0.76
PF13466	STAS_2	0.76
PF00724	Oxidored_FMN	0.76
PF00561	Abhydrolase_1	0.76
PF07730	HisKA_3	0.76
PF12697	Abhydrolase_6	0.76
PF02643	DUF192	0.76
PF07883	Cupin_2	0.76
PF01593	Amino_oxidase	0.76
PF13290	CHB_HEX_C_1	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	6.11
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.76
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.76
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.76
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
All Organisms	root	All Organisms	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
cellular organisms	root	All Organisms → cellular organisms	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.53 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	16.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15.27 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.53 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	16.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.58 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.29 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.53 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.29 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.53 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.53 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.76 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.29 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.53 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.53 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.53 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.29 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.53 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.53 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.53 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.29 %
Nocardioides anomalus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides anomalus	1.53 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1.53 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.53 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10003398	All Organisms → cellular organisms → Bacteria	10075	Open in IMG/M
3300002568\|C688J35102_120768207	Not Available	1526	Open in IMG/M
3300002568\|C688J35102_120950577	Not Available	2888	Open in IMG/M
3300004156\|Ga0062589_100563380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	978	Open in IMG/M
3300004479\|Ga0062595_101367532	Not Available	643	Open in IMG/M
3300005093\|Ga0062594_101701596	Not Available	659	Open in IMG/M
3300005162\|Ga0066814_10002599	Not Available	1671	Open in IMG/M
3300005169\|Ga0066810_10111055	Not Available	618	Open in IMG/M
3300005328\|Ga0070676_10268814	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300005329\|Ga0070683_101670836	Not Available	612	Open in IMG/M
3300005330\|Ga0070690_101528839	Not Available	540	Open in IMG/M
3300005331\|Ga0070670_100519870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300005337\|Ga0070682_100255800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1265	Open in IMG/M
3300005365\|Ga0070688_100287884	Not Available	1183	Open in IMG/M
3300005367\|Ga0070667_100233879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1639	Open in IMG/M
3300005434\|Ga0070709_10173145	Not Available	1510	Open in IMG/M
3300005435\|Ga0070714_100026494	All Organisms → cellular organisms → Bacteria	4792	Open in IMG/M
3300005435\|Ga0070714_100170857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1973	Open in IMG/M
3300005435\|Ga0070714_102043787	Not Available	559	Open in IMG/M
3300005436\|Ga0070713_100398704	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1285	Open in IMG/M
3300005437\|Ga0070710_10902510	Not Available	638	Open in IMG/M
3300005437\|Ga0070710_11535907	Not Available	501	Open in IMG/M
3300005439\|Ga0070711_100200056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1541	Open in IMG/M
3300005439\|Ga0070711_100324143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1232	Open in IMG/M
3300005455\|Ga0070663_100857050	Not Available	782	Open in IMG/M
3300005456\|Ga0070678_100774605	Not Available	869	Open in IMG/M
3300005459\|Ga0068867_100865730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	811	Open in IMG/M
3300005536\|Ga0070697_101672727	Not Available	569	Open in IMG/M
3300005544\|Ga0070686_100842792	Not Available	742	Open in IMG/M
3300005563\|Ga0068855_100037706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	5745	Open in IMG/M
3300005614\|Ga0068856_100050195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4112	Open in IMG/M
3300005614\|Ga0068856_101051656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides anomalus	832	Open in IMG/M
3300005615\|Ga0070702_100864181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300005617\|Ga0068859_100148285	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M
3300005842\|Ga0068858_100592077	Not Available	1075	Open in IMG/M
3300006028\|Ga0070717_10062061	All Organisms → cellular organisms → Bacteria	3099	Open in IMG/M
3300006028\|Ga0070717_10508839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300006163\|Ga0070715_11059789	Not Available	508	Open in IMG/M
3300006175\|Ga0070712_100101459	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300006175\|Ga0070712_100182842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300006175\|Ga0070712_100890689	Not Available	767	Open in IMG/M
3300006175\|Ga0070712_101709419	Not Available	551	Open in IMG/M
3300006237\|Ga0097621_100968248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	795	Open in IMG/M
3300006573\|Ga0074055_11601522	Not Available	836	Open in IMG/M
3300006574\|Ga0074056_11607754	Not Available	853	Open in IMG/M
3300006578\|Ga0074059_10009344	Not Available	901	Open in IMG/M
3300006579\|Ga0074054_11997760	Not Available	1016	Open in IMG/M
3300006605\|Ga0074057_11987159	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300006606\|Ga0074062_10034955	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4332	Open in IMG/M
3300006755\|Ga0079222_10000517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9339	Open in IMG/M
3300006806\|Ga0079220_10014197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3189	Open in IMG/M
3300006852\|Ga0075433_10170801	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300006881\|Ga0068865_101142469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300009174\|Ga0105241_10282869	Not Available	1417	Open in IMG/M
3300009174\|Ga0105241_10704421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	922	Open in IMG/M
3300009176\|Ga0105242_10805366	Not Available	930	Open in IMG/M
3300009176\|Ga0105242_11177276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	785	Open in IMG/M
3300009176\|Ga0105242_11623001	Not Available	681	Open in IMG/M
3300009551\|Ga0105238_11179447	Not Available	790	Open in IMG/M
3300010371\|Ga0134125_10007246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12520	Open in IMG/M
3300010373\|Ga0134128_10642485	Not Available	1180	Open in IMG/M
3300010396\|Ga0134126_10534527	Not Available	1347	Open in IMG/M
3300010399\|Ga0134127_11257950	Not Available	808	Open in IMG/M
3300011107\|Ga0151490_1338063	Not Available	1587	Open in IMG/M
3300012212\|Ga0150985_109817138	Not Available	1266	Open in IMG/M
3300012350\|Ga0137372_10568548	Not Available	835	Open in IMG/M
3300012469\|Ga0150984_110781696	Not Available	905	Open in IMG/M
3300012951\|Ga0164300_10045825	Not Available	1701	Open in IMG/M
3300012951\|Ga0164300_10387931	Not Available	763	Open in IMG/M
3300012955\|Ga0164298_10191447	Not Available	1188	Open in IMG/M
3300012957\|Ga0164303_10067772	Not Available	1652	Open in IMG/M
3300012957\|Ga0164303_11431679	Not Available	518	Open in IMG/M
3300012960\|Ga0164301_10068075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1916	Open in IMG/M
3300012960\|Ga0164301_10103090	Not Available	1643	Open in IMG/M
3300012960\|Ga0164301_10211463	Not Available	1245	Open in IMG/M
3300012960\|Ga0164301_11160384	Not Available	618	Open in IMG/M
3300012984\|Ga0164309_10069016	Not Available	2124	Open in IMG/M
3300012984\|Ga0164309_10356586	Not Available	1076	Open in IMG/M
3300012985\|Ga0164308_10025295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3537	Open in IMG/M
3300012985\|Ga0164308_10374408	Not Available	1156	Open in IMG/M
3300012986\|Ga0164304_10001290	All Organisms → cellular organisms → Bacteria	8286	Open in IMG/M
3300012986\|Ga0164304_10630992	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012987\|Ga0164307_10395062	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300012987\|Ga0164307_10997879	Not Available	681	Open in IMG/M
3300012987\|Ga0164307_11781316	Not Available	522	Open in IMG/M
3300012988\|Ga0164306_11481367	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300012989\|Ga0164305_10148595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1586	Open in IMG/M
3300012989\|Ga0164305_10746252	All Organisms → cellular organisms → Bacteria → Terrabacteria group	805	Open in IMG/M
3300013105\|Ga0157369_12425448	Not Available	531	Open in IMG/M
3300013308\|Ga0157375_11112752	Not Available	925	Open in IMG/M
3300014745\|Ga0157377_10155300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1418	Open in IMG/M
3300014968\|Ga0157379_10139903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2182	Open in IMG/M
3300015077\|Ga0173483_10998362	Not Available	501	Open in IMG/M
3300015371\|Ga0132258_10030896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11969	Open in IMG/M
3300015373\|Ga0132257_100909412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1103	Open in IMG/M
3300020082\|Ga0206353_11391008	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300022898\|Ga0247745_1045007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300025898\|Ga0207692_10038329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2350	Open in IMG/M
3300025898\|Ga0207692_10042286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2261	Open in IMG/M
3300025900\|Ga0207710_10009609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4063	Open in IMG/M
3300025901\|Ga0207688_10009212	All Organisms → cellular organisms → Bacteria	5378	Open in IMG/M
3300025903\|Ga0207680_11374019	Not Available	501	Open in IMG/M
3300025905\|Ga0207685_10750303	Not Available	535	Open in IMG/M
3300025911\|Ga0207654_10342593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1027	Open in IMG/M
3300025911\|Ga0207654_10711461	Not Available	722	Open in IMG/M
3300025914\|Ga0207671_10172077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300025914\|Ga0207671_11533533	Not Available	514	Open in IMG/M
3300025916\|Ga0207663_10013070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4504	Open in IMG/M
3300025916\|Ga0207663_11442714	Not Available	554	Open in IMG/M
3300025917\|Ga0207660_10976749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	691	Open in IMG/M
3300025924\|Ga0207694_10996903	Not Available	709	Open in IMG/M
3300025927\|Ga0207687_10057450	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300025927\|Ga0207687_10655684	Not Available	888	Open in IMG/M
3300025928\|Ga0207700_10733807	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300025929\|Ga0207664_10012575	All Organisms → cellular organisms → Bacteria	6054	Open in IMG/M
3300025931\|Ga0207644_10541665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	963	Open in IMG/M
3300025932\|Ga0207690_11846678	Not Available	504	Open in IMG/M
3300025935\|Ga0207709_10336619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1134	Open in IMG/M
3300025935\|Ga0207709_11115581	Not Available	648	Open in IMG/M
3300025938\|Ga0207704_10117588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1811	Open in IMG/M
3300025939\|Ga0207665_10206630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1433	Open in IMG/M
3300025941\|Ga0207711_10289248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1510	Open in IMG/M
3300025945\|Ga0207679_11729709	Not Available	572	Open in IMG/M
3300025960\|Ga0207651_10852806	Not Available	810	Open in IMG/M
3300025961\|Ga0207712_10721499	Not Available	871	Open in IMG/M
3300025981\|Ga0207640_10462017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1049	Open in IMG/M
3300026078\|Ga0207702_11204664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides anomalus	751	Open in IMG/M
3300026088\|Ga0207641_11376006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300027725\|Ga0209178_1108484	Not Available	933	Open in IMG/M
3300031938\|Ga0308175_102690714	Not Available	556	Open in IMG/M
3300033233\|Ga0334722_10814900	Not Available	660	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.83%
Host-Associated	Host-Associated	38.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.07%
Plants	Host-Associated → Plants	38.17%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.21%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.35%
Loam	Environmental → Terrestrial → Soil → Loam	26.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Lake	Environmental → Aquatic → Freshwater → Lake	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.29%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_100033983	3300001686	Soil	MDDQAWELATVIARNETRATTIVAALAESQPVGLSSLPLSAYKAEIRRDWRESGHDSDPASLADDLTGIFDRLGAAVRSAVARGDWDWGXXPPSSFALWLERTLGDLQATA*
C688J35102_1207682074	3300002568	Soil	MDDQAWELAGVISRNETRATTIVAALAESQSVGLFSLPLSAYTAEIRRDWRESGHDADPAALADDLAVIFDRLGAAVRSAVAQGDWDWGD
C688J35102_1209505772	3300002568	Soil	MDDQAWELATVIARNETRATTIVAALAESQPVGLSSLPLSAYKAEIRRDWRESGHDSDPASLADDLTGIFDRLGAAVRSAVARGDWDWGDHPPSSFALWLERTLGDLQATA*
Ga0062589_1005633802	3300004156	Soil	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP*
Ga0062595_1013675321	3300004479	Soil	MANVIVRDETRATTIVAALAAYQSLSLSSPPLSAYAAEMGREWRLHGHDTDPATFADDLETIFDGLGTAVRNAVRQGEWDWGDYPPASFASWLERQLAELRRGTM*
Ga0062594_1017015961	3300005093	Soil	VAWGQSLDLGGSTAPEQRRVVARYRLTPMDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0066814_100025994	3300005162	Soil	MDDQVWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSSDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0066810_101110551	3300005169	Soil	TAALGLGPTSPEQSPRRLGGRLTPMDDQVWELVSVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0070676_102688141	3300005328	Miscanthus Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP*
Ga0070683_1016708361	3300005329	Corn Rhizosphere	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLER
Ga0070690_1015288391	3300005330	Switchgrass Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGELHTTD*
Ga0070670_1005198702	3300005331	Switchgrass Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP*
Ga0070682_1002558001	3300005337	Corn Rhizosphere	RNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTNPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0070688_1002878841	3300005365	Switchgrass Rhizosphere	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0070667_1002338791	3300005367	Switchgrass Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERT
Ga0070709_101731451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELARVITQDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD*
Ga0070714_1000264941	3300005435	Agricultural Soil	IRATRDRCPPSARRLGATLTRMDDQAWELARVITQDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD*
Ga0070714_1001708572	3300005435	Agricultural Soil	MIPSGRLEDNPAGRLTRMNDQAWELARVIARNETRATTIVAALAESQPVTLTSLPLSAYTAEIRRDWRDSGKDTDPAELADDLAVIFDQLGVAVRAAVAHGDWDWGDHPPSSFALWVERALGELNGSA*
Ga0070714_1020437872	3300005435	Agricultural Soil	MDDQAWELARVIAEDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSS
Ga0070713_1003987041	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIARNETRATTVVAALAESQPVSLSSLPLSAYTAEIRRDWRESGKDTDPAELADDLTAIFDRLGVAVREAVARGDWDWGDHPPSSFA
Ga0070710_109025101	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPMDDQAWELANVIARNETRATTIVAALAESQQVSLSSLPLSAYAAEIRRDWREFGKDTDPATLTADLTVIFDALGTAVRRAVAQGDWDWGDHPPSSFALWLERTLGDLQTTG*
Ga0070710_115359071	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELARVIAHDETRATVIVASLAESQSVSLSALPLSAYAAEIRRDWRELGKDTDPATLATDLTEIFDLLGTAVRRAVVEGDWDWGDHPPS
Ga0070711_1002000562	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELARVITHDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD*
Ga0070711_1003241432	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGASARRVRADATLMPMDDQAWELANVIARNETRATTIVAALAESQQVSLSSLPLSAYAAEIRRDWREFGKDTDPATLTADLTVIFDRLGTAVRRAVAQGDWDWGDHPPSSFALWLERTLSELHGVT*
Ga0070663_1008570501	3300005455	Corn Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWL
Ga0070678_1007746052	3300005456	Miscanthus Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0068867_1008657301	3300005459	Miscanthus Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFA
Ga0070697_1016727271	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLSVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLAELRATA*
Ga0070686_1008427921	3300005544	Switchgrass Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0068855_1000377064	3300005563	Corn Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP*
Ga0068856_1000501957	3300005614	Corn Rhizosphere	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0068856_1010516562	3300005614	Corn Rhizosphere	ATTIVAALAAYQSLSLSSPPLSAYAAEMGREWRLHGHDTDPATFADDLETIFDGLGAAVRNAVRQGEWDWGDYPPASFASWLERQLAELRRGTM*
Ga0070702_1008641812	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLE
Ga0068859_1001482853	3300005617	Switchgrass Rhizosphere	VAWGQSLDLGGSTAPEQRRVVARYRLTPMDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0068858_1005920771	3300005842	Switchgrass Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0070717_100620612	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LGELSSLHLRVRIRATRDRCPPSARRLGATLTRMDDQAWELARVITQDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD*
Ga0070717_105088392	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GATLTRMDDQAWELARVIAEDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD*
Ga0070715_110597891	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	WELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGDLQTTG*
Ga0070712_1001014592	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELARVIAHDETRATVIVASLAESQSVSLSALPLSAYAAEIRRDWRELGKDTDPATLATDLTEIFDLLGTAVRKAVVEGDWDWGDHPPSSFTLWLESTLSELQRAG*
Ga0070712_1001828421	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD*
Ga0070712_1008906891	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DATLMPMDDQAWELANVIARNETRATTIVAALAESQQVSLSSLPLSAYAAEIRRDWREFGKDTDPATLTADLTVIFDRLGTAVRRAVAQGDWDWGDHPPSSFALWLERTLSQLHDTG*
Ga0070712_1017094191	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTMDDQAWELADVIARNETRATTIVAALAESQSVSLSSLPLSAYEAEIRRDWRESGKDTDPATLTADLTMIFDRLGTSVRRAIARGDWDWGDHPPSSFALWLDRTLSELRATG*
Ga0097621_1009682482	3300006237	Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLSVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0074055_116015221	3300006573	Soil	MDDQVWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELHATG*
Ga0074056_116077541	3300006574	Soil	MDDQVWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0074059_100093441	3300006578	Soil	ASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0074054_119977602	3300006579	Soil	MDDQAWELASVITRNETRATTIVAALAESQSVTLSSLPLSAYVAEIRRDWRESGKDTDPAALEDDLTVIFDGLGLAVRRAVAQGDWDWGDHPPSSFALWLERTLSELHATG*
Ga0074057_119871591	3300006605	Soil	NETRATTIVAALAESQSVSLSLLPLSAYAAEIRRDWRESGKDTDPAALEDDLTVIFDGLGLAVRRAVAQGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0074062_100349553	3300006606	Soil	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0079222_1000051711	3300006755	Agricultural Soil	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLAVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0079220_100141975	3300006806	Agricultural Soil	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLAVIFDRLGVAVRTAVAQGDWDWGHHPPSSFALWFERTLAELRATG*
Ga0075433_101708012	3300006852	Populus Rhizosphere	MDDQAWELASVIARNETRATTIVATLAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLAVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0068865_1011424692	3300006881	Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDLGDHPPSSFALWLERTLAE
Ga0105241_102828691	3300009174	Corn Rhizosphere	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGELHTTD*
Ga0105241_107044213	3300009174	Corn Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPP
Ga0105242_108053662	3300009176	Miscanthus Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGDLQTTG*
Ga0105242_111772761	3300009176	Miscanthus Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWL
Ga0105242_116230012	3300009176	Miscanthus Rhizosphere	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDCDWGDHPPSSFALWLERTLAELRATG*
Ga0105238_111794471	3300009551	Corn Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGELHTTD*
Ga0134125_100072464	3300010371	Terrestrial Soil	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGDLQTTG*
Ga0134128_106424852	3300010373	Terrestrial Soil	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTNPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0134126_105345273	3300010396	Terrestrial Soil	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0134127_112579502	3300010399	Terrestrial Soil	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWL
Ga0151490_13380632	3300011107	Soil	DDQVWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLEDDLTVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLSELRANG*
Ga0150985_1098171381	3300012212	Avena Fatua Rhizosphere	AWQLASVIARNETRATTIVAALAESQPVGLSSLPLSAYGAEIRRDWREFGKDTDPAALTADLTVIFDRLGMAVRRAVAAGDWDWGDHPPSSFALWLERALSELHATG*
Ga0137372_105685482	3300012350	Vadose Zone Soil	MAVRDQAWELAKIIVHDETRATTIVAALAVSQSVTLSSPPLSAYAVEIRRDWRLHGHDTDPAALAPDLEAIFDRLGPAVRNAVAQNEWDWGDHPPASFASWLEHDLDELHEVHLRDLRDQRNT*
Ga0150984_1107816961	3300012469	Avena Fatua Rhizosphere	LVATLTTVDEQAWQLASVIARNETRATTIVAALAESQPVGLSSLPLSAYGAEIRRDWREFGKDTDPAALTADLTVIFDRLGMAVRRAVAAGDWDWGDHPPSSFALWLERALSELHATG*
Ga0164300_100458252	3300012951	Soil	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPSSFALWLERTLGELHATG*
Ga0164300_103879312	3300012951	Soil	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWPDRTLGDLQTTG*
Ga0164298_101914472	3300012955	Soil	MDDQAWELAGVIARNETRATTIVAALAESQAVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPSSFALWLERTLGELHATD*
Ga0164303_100677723	3300012957	Soil	MDDQAWELAGVIARNETRATTIVAALAESQAVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGAAVRAAVARGDWDWGDHPPSSFALWLERTLSQLHATG*
Ga0164303_114316791	3300012957	Soil	MDDQAWELASVIARNETRATTVVAALAESQPVSLSSLPLSAYEAEIRRDWREAGKDTDPATLADDLTLIFDRLGVAVRTAVARGDWDWGDHPPSSFALCVERALGELHDTG*
Ga0164301_100680752	3300012960	Soil	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKNTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGDLQTTG*
Ga0164301_101030901	3300012960	Soil	ETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPSSFALWLERTLGELHATD*
Ga0164301_102114631	3300012960	Soil	LGTLTPMDDQAWELANVIARNETRATTVVSALAESQSVSVSSLPLSAYEAEIRRDWRESGKDTDPATLAADLTEIFDRVGLAVRRAVAEGDWDWGDHPPSSFALWLERTLSQLHATG*
Ga0164301_111603842	3300012960	Soil	MDDQAWELARVIAHDETRATVIVASLAESQSVSLSALPLSAYAAEIRRDWRELGKDTDPATLATDLTEIFDLLGTAVRKAVVEGDWDWGDHPPSSFTLWLESTLSELQRTG*
Ga0164309_100690162	3300012984	Soil	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPSSFALWLERTLGELHATD*
Ga0164309_103565861	3300012984	Soil	RNETRATTVVAALAESQSVSVSSLPLSAYEAEIRRDWRESGKDTDPATLAADLMVIFDRVGLAVRRAVAEGDWDWGDHPPSSFALWLERTLSHLHATG*
Ga0164308_100252953	3300012985	Soil	MDDQAWELAGVIARNETRATTIVAALAESQAVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPSSFALWLERTLGELNATD*
Ga0164308_103744082	3300012985	Soil	MDDQAWELARVITRNETRATTVVAALAESQSVSVSSLPLSAYEAEIRRDWRESGKDTDPATLAADLTVIFDRVGLAVRRAVAEGDWDWGDHPPSSFALWLERTLSQLHATG*
Ga0164304_100012906	3300012986	Soil	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELADDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGDLQTTG*
Ga0164304_106309921	3300012986	Soil	MDDQAWELASVIARNETRATTVVAALAESQPVSLSSLPLSAYEAEIRRDWREAGKDTDPATLADDLTLIFDRLGVAVRTAVARGDWDWGDHPPSSFALWVERALGELHDTG*
Ga0164307_103950622	3300012987	Soil	MDDQAWELASVIARNETRATTVVAALAESQPVSLSSLPLSAYEAEIRRDWREADKDTDPATLADDLTLIFDRLGVAVRTAVARGDWDWGDHPPSSFALWVERALGELHDTG*
Ga0164307_109978792	3300012987	Soil	MDDQAWELANVIARNETRATTVVAALAESQSVSVSSLPLSAYEAEIRRDWRESGKDTDPATLAADLTVIFDRVGLAVRRAVAEGDWDWGDHPPSSFALWLERTLSHLHATG*
Ga0164307_117813161	3300012987	Soil	MDDQAWELAGVIARNETRATTIVAALAESQAVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPS
Ga0164306_114813671	3300012988	Soil	MDDEAWELASVIARNETRATTVVAALAESQPVSLSSLPLSAYEAEIRRDWREAGKDTDPATLADDLTVIFDRLGVAVREAVARGDWDWGDHPPSSFALW
Ga0164305_101485951	3300012989	Soil	MDDQAWELAGVIARNETRATTIVAALAESQAVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDITVIFDRLGTAVRAAVARGDWDWGDHPPSSFALWLERTLGELHATG*
Ga0164305_107462521	3300012989	Soil	MDDQAWELASVIARNETRATTVVAALAESQPVSLSSLPLSAYEAEIRRDWREADKDTDPATLADDLTLIFDRLGVAVRTAVARGDWDWGDHPPSSFALWVERALDELHDTG*
Ga0157369_124254481	3300013105	Corn Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYPAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP*
Ga0157375_111127522	3300013308	Miscanthus Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGELHTT
Ga0157377_101553003	3300014745	Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLADLRATADGVP*
Ga0157379_101399034	3300014968	Switchgrass Rhizosphere	RNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG*
Ga0173483_109983621	3300015077	Soil	PPVLLARLTPMDDQAWELASVITRNETRATTIVAALAESQSVSLSSLPLAAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPLSSFALWLERTLAELRATADGVP*
Ga0132258_100308964	3300015371	Arabidopsis Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVRLSSLPLSAYTAEIRRDWRESGKDTDPAAFADDLVVIFDRLGVAVRAAVARGDWDWGDHPPSSFALWLERTLGGLRGTG*
Ga0132257_1009094121	3300015373	Arabidopsis Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVRLSSLPLSAYTAEIRRDWRESGKDTDPAAFADDLVVIFDRLGVAVRAAVTRGDWDWGDHPPSSFALWLERTLGGLRGTG*
Ga0206353_113910083	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP
Ga0247745_10450072	3300022898	Soil	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWL
Ga0207692_100383294	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	WGATLTRMDDQAWELARVIAEDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGPGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD
Ga0207692_100422862	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAAMAESQPVTLSSLPLSAYTAEIRRDWRESGRDTDPAELADDLTVIFERLGTTVRAAVARGDWDWGDHPPSSFALWVERALGELRI
Ga0207710_100096093	3300025900	Switchgrass Rhizosphere	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Ga0207688_100092122	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP
Ga0207680_113740191	3300025903	Switchgrass Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWG
Ga0207685_107503031	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RMNDQAWELARVIARNETRATTVVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGDLQTTG
Ga0207654_103425931	3300025911	Corn Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGELHTTD
Ga0207654_107114611	3300025911	Corn Rhizosphere	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERTLGDLQTTG
Ga0207671_101720772	3300025914	Corn Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGELHTTD
Ga0207671_115335332	3300025914	Corn Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRAT
Ga0207663_100130703	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELARVITHDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD
Ga0207663_114427141	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPMDDQAWELANVIARNETRATTIVAALAESQQVSLSSLPLSAYAAEIRRDWREFGKDTDPATLTADLTVIFDRLGTAVRRAVAQGDWDWGDHPPSSFALWLERTLSELHGVT
Ga0207660_109767492	3300025917	Corn Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLERT
Ga0207694_109969031	3300025924	Corn Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALRLERT
Ga0207687_100574501	3300025927	Miscanthus Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP
Ga0207687_106556842	3300025927	Miscanthus Rhizosphere	MNDQAWELAHVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTGDLAVIFDRLGAAVRTALARGDWDWGDHPPS
Ga0207700_107338071	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIPSGRLEDNPAGRLTRMNDQAWELARVIARNETRATTVVAALAESQPVSLSSLPLSAYTAEIRRDWRESGKDTDPAELADDLTAIFDRLGVAVRAAVVRGD
Ga0207664_100125756	3300025929	Agricultural Soil	SSLHLRVRIRATRDRCPPSARRLGATLTRMDDQAWELARVITQDETRATTIVATLAESQPVSLSSLPLSAYAAEIRRDWRGLGKDTDPATLAADLTAIFDLLGTAVRKAVAQGDWDWGDHPPSSFTLWLDGALSELRAAD
Ga0207644_105416651	3300025931	Switchgrass Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQPVSLSSLPLAAYTAEIRRDWRDSGKDTDPAELTDDLAVIFDRLGTAVRTALARGDWDWGDHPPSSFALWLER
Ga0207690_118466782	3300025932	Corn Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRAT
Ga0207709_103366192	3300025935	Miscanthus Rhizosphere	MDDEAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVP
Ga0207709_111155811	3300025935	Miscanthus Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Ga0207704_101175881	3300025938	Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSLLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATADGVPVVLDRLPRRQQARRRGNRGRPVRRAPG
Ga0207665_102066303	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLSVIFDRLGTAVRTAVAEGDWDWGDHPPSSFALWLERTLAELRATA
Ga0207711_102892483	3300025941	Switchgrass Rhizosphere	MDDQAWELASVITRNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Ga0207679_117297092	3300025945	Corn Rhizosphere	ATTIVAAMAESQSVSLSSLPLSAYTGEIRRDWREAGKDTDPATLEDDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Ga0207651_108528062	3300025960	Switchgrass Rhizosphere	MDDQAWELASVIARNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLGELH
Ga0207712_107214992	3300025961	Switchgrass Rhizosphere	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKDTDPATLADDLTVIFDRLGTAVRTAVARGDWDWGDHPPSSFALWLERTLG
Ga0207640_104620172	3300025981	Corn Rhizosphere	MDDQAWELAGVIARNETRATTIVAAMAESQSVSLSSLPLSAYTAEIRRDWREAGKDTNPATLADDLTVIFDRLGTAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Ga0207702_112046642	3300026078	Corn Rhizosphere	ATTIVAALAAYQSLSLSSPPLSAYAAEMGREWRLHGHDTDPATFADDLETIFDGLGAAVRNAVRQGEWDWGDYPPASFASWLERQLAELRRGTM
Ga0207641_113760061	3300026088	Switchgrass Rhizosphere	MDDQAWELAGVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWRESGKSTDPATLADDLTVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELR
Ga0209178_11084842	3300027725	Agricultural Soil	MDDQAWELASVIARNETRATTIVAALAESQSVSLSSLPLSAYTAEIRRDWREAGKDTDPATLADDLAVIFDRLGVAVRTAVAQGDWDWGDHPPSSFALWLERTLAELRATG
Ga0308175_1026907141	3300031938	Soil	VIVHDETRATTIAAALAAYQSLSLSSPPLSAYVAEMGREWRLDAHDTDPATFADDLEKIFDGLGTAVRNAVRRGEWDWGDYPPASFASWLEHQLAEMRRGTM
Ga0334722_108149001	3300033233	Sediment	RRGERVPAHDRGRGTLRTMNDRAWELATVICRNETRATTIVAALAESRPVTLSSLPLSAYAAEIRRDWRLTGHDGDPAALAPDLRVIFDLVGGSVRRAVANGEWDWGDRPPASFALWLERSLAELRATDARRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062194

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences