Metagenome Family F062192

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062192
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	66 residues
Representative Sequence	MTAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS
Number of Associated Samples	89
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.89 %
% of genes near scaffold ends (potentially truncated)	36.64 %
% of genes from short scaffolds (< 2000 bps)	88.55 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.420 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (50.382 % of family members)
Environment Ontology (ENVO)	Unclassified (79.389 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (83.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.79% β-sheet: 0.00% Coil/Unstructured: 21.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00072	Response_reg	7.63
PF00069	Pkinase	6.87
PF01068	DNA_ligase_A_M	2.29
PF12844	HTH_19	1.53
PF00589	Phage_integrase	1.53
PF03459	TOBE	0.76
PF13366	PDDEXK_3	0.76
PF02065	Melibiase	0.76
PF00534	Glycos_transf_1	0.76
PF09278	MerR-DNA-bind	0.76
PF07638	Sigma70_ECF	0.76
PF02518	HATPase_c	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	27.48
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.29
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.29
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.76
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.76
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.42 %
Unclassified	root	N/A	4.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.42 %
Unclassified	root	N/A	4.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.42 %
Unclassified	root	N/A	4.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.39 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.58 %
Unclassified	root	N/A	4.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	69.47 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.58 %
Unclassified	root	N/A	4.58 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.47 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	4.58 %
Unclassified	root	N/A	4.58 %
Caldilineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.47 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Unclassified	root	N/A	4.58 %
Caldilineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10073575	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300002558\|JGI25385J37094_10210801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300002561\|JGI25384J37096_10239574	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300002911\|JGI25390J43892_10053439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300002912\|JGI25386J43895_10094408	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300005166\|Ga0066674_10050017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1884	Open in IMG/M
3300005167\|Ga0066672_10163387	Not Available	1402	Open in IMG/M
3300005171\|Ga0066677_10448804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300005171\|Ga0066677_10616217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300005172\|Ga0066683_10440189	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005174\|Ga0066680_10157674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1422	Open in IMG/M
3300005174\|Ga0066680_10225415	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300005175\|Ga0066673_10013548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3575	Open in IMG/M
3300005175\|Ga0066673_10271824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	984	Open in IMG/M
3300005175\|Ga0066673_10588399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005176\|Ga0066679_10044293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2530	Open in IMG/M
3300005177\|Ga0066690_10237645	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300005178\|Ga0066688_10167463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1383	Open in IMG/M
3300005178\|Ga0066688_10499341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005178\|Ga0066688_10561946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300005179\|Ga0066684_10480511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300005180\|Ga0066685_10431861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300005180\|Ga0066685_10704254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300005180\|Ga0066685_11097032	Not Available	521	Open in IMG/M
3300005181\|Ga0066678_11142552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005186\|Ga0066676_10056021	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300005186\|Ga0066676_10705994	Not Available	687	Open in IMG/M
3300005187\|Ga0066675_10149856	Not Available	1599	Open in IMG/M
3300005187\|Ga0066675_10162201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300005187\|Ga0066675_10820954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300005332\|Ga0066388_100609430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1713	Open in IMG/M
3300005446\|Ga0066686_10088087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1979	Open in IMG/M
3300005446\|Ga0066686_10652501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300005447\|Ga0066689_10936420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005450\|Ga0066682_10505476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300005454\|Ga0066687_10060816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1796	Open in IMG/M
3300005540\|Ga0066697_10089882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1781	Open in IMG/M
3300005552\|Ga0066701_10340385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300005555\|Ga0066692_10312746	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300005556\|Ga0066707_10484805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300005557\|Ga0066704_10496196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300005557\|Ga0066704_10834649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005558\|Ga0066698_10849679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005560\|Ga0066670_10043792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2279	Open in IMG/M
3300005561\|Ga0066699_10084861	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300005568\|Ga0066703_10035994	All Organisms → cellular organisms → Bacteria → Acidobacteria	2699	Open in IMG/M
3300005568\|Ga0066703_10831118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005569\|Ga0066705_10391579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300005574\|Ga0066694_10198234	Not Available	953	Open in IMG/M
3300005576\|Ga0066708_10612691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300005576\|Ga0066708_10932711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005598\|Ga0066706_10282114	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300005598\|Ga0066706_10365223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300005598\|Ga0066706_10673427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300005598\|Ga0066706_11105903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300006163\|Ga0070715_11085025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006173\|Ga0070716_101408999	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006791\|Ga0066653_10568678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300006797\|Ga0066659_11012878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300006800\|Ga0066660_10642862	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300009012\|Ga0066710_102610486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300009012\|Ga0066710_102945308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009137\|Ga0066709_100981147	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300009137\|Ga0066709_101690001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300009137\|Ga0066709_103727991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009137\|Ga0066709_103742690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300010304\|Ga0134088_10415242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300010321\|Ga0134067_10102245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300010325\|Ga0134064_10032035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1548	Open in IMG/M
3300010333\|Ga0134080_10127395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300010336\|Ga0134071_10134655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300012198\|Ga0137364_10243895	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300012199\|Ga0137383_10391555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300012199\|Ga0137383_10570508	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300012199\|Ga0137383_10846793	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300012208\|Ga0137376_10163315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1919	Open in IMG/M
3300012208\|Ga0137376_11342704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae	605	Open in IMG/M
3300012211\|Ga0137377_11071969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300012285\|Ga0137370_10063771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2005	Open in IMG/M
3300012285\|Ga0137370_10769032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300012349\|Ga0137387_10276634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300012356\|Ga0137371_10024879	All Organisms → cellular organisms → Bacteria	4610	Open in IMG/M
3300012357\|Ga0137384_10358588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300012359\|Ga0137385_10961639	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012359\|Ga0137385_11020032	Not Available	682	Open in IMG/M
3300012359\|Ga0137385_11575547	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300012582\|Ga0137358_10855239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300012975\|Ga0134110_10242173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300012977\|Ga0134087_10037613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1859	Open in IMG/M
3300012977\|Ga0134087_10547598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300015358\|Ga0134089_10014826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2576	Open in IMG/M
3300015359\|Ga0134085_10182727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300017657\|Ga0134074_1095952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1017	Open in IMG/M
3300017659\|Ga0134083_10362609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300018431\|Ga0066655_10098828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1631	Open in IMG/M
3300018431\|Ga0066655_10482552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300018431\|Ga0066655_10621036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300018433\|Ga0066667_10133318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1721	Open in IMG/M
3300018433\|Ga0066667_10149508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1645	Open in IMG/M
3300018433\|Ga0066667_10332432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300018433\|Ga0066667_10746411	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300018433\|Ga0066667_10810605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300018433\|Ga0066667_12024145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300018468\|Ga0066662_12157027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300018482\|Ga0066669_10128638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1820	Open in IMG/M
3300018482\|Ga0066669_10134742	All Organisms → cellular organisms → Bacteria → Acidobacteria	1787	Open in IMG/M
3300025915\|Ga0207693_11032964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300025922\|Ga0207646_11050305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300025939\|Ga0207665_11161636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300026297\|Ga0209237_1089929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300026298\|Ga0209236_1281195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300026309\|Ga0209055_1027305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2654	Open in IMG/M
3300026313\|Ga0209761_1212216	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300026318\|Ga0209471_1050391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1936	Open in IMG/M
3300026326\|Ga0209801_1128937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300026327\|Ga0209266_1059690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1827	Open in IMG/M
3300026328\|Ga0209802_1171067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300026342\|Ga0209057_1037378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2455	Open in IMG/M
3300026523\|Ga0209808_1019943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3332	Open in IMG/M
3300026529\|Ga0209806_1028618	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300026529\|Ga0209806_1114955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300026530\|Ga0209807_1076797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1486	Open in IMG/M
3300026530\|Ga0209807_1170762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300026537\|Ga0209157_1138388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300026538\|Ga0209056_10099182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2382	Open in IMG/M
3300026538\|Ga0209056_10366810	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300026540\|Ga0209376_1139242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300026547\|Ga0209156_10356358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300026548\|Ga0209161_10076776	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300026548\|Ga0209161_10338689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300027748\|Ga0209689_1308095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.60%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	70.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.37%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	50.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	19.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100735752	3300002558	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS*
JGI25385J37094_102108011	3300002558	Grasslands Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRAK*
JGI25384J37096_102395742	3300002561	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLEXIQRS*
JGI25390J43892_100534393	3300002911	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISXALSHLENIQRS*
JGI25386J43895_100944082	3300002912	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRG*
Ga0066674_100500175	3300005166	Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0066672_101633874	3300005167	Soil	MSEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHISEALSHLENIRRG*
Ga0066677_104488042	3300005171	Soil	MRIFRVRMCEMSEHLDWMKLYRAALRDTNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIQ*
Ga0066677_106162171	3300005171	Soil	AELEWIKLYRAALRETDPDKQPARVEEAKRVMRQALRMAVEYEDSDQRHAIGEALSHLENIQRS*
Ga0066683_104401893	3300005172	Soil	MIAELEWIKLYRAALRETDPEKQVSRIEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS
Ga0066680_101576743	3300005174	Soil	VLMIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS*
Ga0066680_102254152	3300005174	Soil	MSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENI*
Ga0066673_100135483	3300005175	Soil	MAEHLEWIRLYRSALQETDPAKQQARIEEAKRMMKQALRLAVEYEDSDQRRTISEALSHLENIRRS*
Ga0066673_102718241	3300005175	Soil	MTAELEWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENI
Ga0066673_105883991	3300005175	Soil	MTSELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS*
Ga0066679_100442936	3300005176	Soil	MIAELEWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0066690_102376453	3300005177	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS*
Ga0066688_101674631	3300005178	Soil	MRIFRVRMCQMSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIGQALSHLENIQ*
Ga0066688_104993412	3300005178	Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRAK*
Ga0066688_105619461	3300005178	Soil	IAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS*
Ga0066684_104805112	3300005179	Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIGRHPPLPRQRSS*
Ga0066685_104318612	3300005180	Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAIS
Ga0066685_107042541	3300005180	Soil	MSEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIRRG*
Ga0066685_110970322	3300005180	Soil	MPEHLDWIKLYRAALHETDPEKQAARLEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLEN
Ga0066678_111425521	3300005181	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQR
Ga0066676_100560212	3300005186	Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIRRS*
Ga0066676_107059941	3300005186	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQLHAISEALSHLENIQRTK*
Ga0066675_101498561	3300005187	Soil	MKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENI
Ga0066675_101622015	3300005187	Soil	EWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0066675_108209541	3300005187	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRTK*
Ga0066388_1006094303	3300005332	Tropical Forest Soil	MPPIPEHLDWIKFYRAALYETDPAKQSARIEEAKHAMKQALRLAVEYEDSEQRHAISEALSHLENIKPS*
Ga0066686_100880873	3300005446	Soil	MWCVVPVRRETMCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQLHAISEALSHLENIQRTK*
Ga0066686_106525012	3300005446	Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENI
Ga0066689_109364202	3300005447	Soil	MKLYRVALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIQRS*
Ga0066682_105054763	3300005450	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRYAIGEALSHLENIRRS*
Ga0066687_100608161	3300005454	Soil	VLMIAELEWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0066697_100898822	3300005540	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRTK*
Ga0066701_103403851	3300005552	Soil	IKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRG*
Ga0066692_103127462	3300005555	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIRRS*
Ga0066707_104848052	3300005556	Soil	MSGHLEWINLYRAALRETDPDKLQARIEEAEQAMRLALRSAVEYEDSDQRHTIGEALRHL
Ga0066704_104961962	3300005557	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRS*
Ga0066704_108346491	3300005557	Soil	MRIFRVRMCQMSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENI
Ga0066698_108496792	3300005558	Soil	MTAELEWIKLYRASLRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIGRHPPLPRQRSS*
Ga0066670_100437923	3300005560	Soil	MTAELEWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0066699_100848612	3300005561	Soil	MSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLEN
Ga0066703_100359943	3300005568	Soil	MSEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIQRAK*
Ga0066703_108311181	3300005568	Soil	MTAELEWIKLYRAALRETDPDKQPARVEKAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRG*
Ga0066705_103915792	3300005569	Soil	MRIFRVRMCQMSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIGQALSHLEN
Ga0066694_101982342	3300005574	Soil	MSEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISE
Ga0066708_106126912	3300005576	Soil	MCQMSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS*
Ga0066708_109327111	3300005576	Soil	MPEHLDWIKLYRAALHETDPEKQAARLEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQ
Ga0066706_102821141	3300005598	Soil	MIAELEWIKLYRAALRETDPEKQPARLEEAKNAMRQALRMAVEYEDSDQRHAIGEALSHLENI*
Ga0066706_103652232	3300005598	Soil	MSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIGQALSHLENIQ*
Ga0066706_106734272	3300005598	Soil	MWCVVPVRRETMCAMPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRAK*
Ga0066706_111059032	3300005598	Soil	MIAELEWIKLYRAALRETDPEKQVSRIEEAKRAMKQALRMAVEYEDSDQRHAISEA
Ga0070715_110850252	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSEHLYWMKLYRTALRETNPEKQPARVEEAKDAMKQALRMAVEYEDSDQRHAISEALSHLENIQRR*
Ga0070716_1014089992	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	HLDWIKLYRAALHETDPEKQPARIEEAKNAMKQALRMAIEYEDSDQRHAISEALSHLENIQRTK*
Ga0066653_105686781	3300006791	Soil	VSMWCVVPVRRETMCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRTK*
Ga0066659_110128781	3300006797	Soil	MSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS*
Ga0066660_106428621	3300006800	Soil	MRIFRVRMCQMSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIG
Ga0066710_1026104861	3300009012	Grasslands Soil	MTAELEWIKLYRASLRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENI
Ga0066710_1029453081	3300009012	Grasslands Soil	MSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIR
Ga0066709_1009811474	3300009137	Grasslands Soil	MPEHLDWIKLYRAALHETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDPLSHLENIRRS*
Ga0066709_1016900011	3300009137	Grasslands Soil	MSEHLDWTKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS*
Ga0066709_1037279911	3300009137	Grasslands Soil	LEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS*
Ga0066709_1037426902	3300009137	Grasslands Soil	LEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS*
Ga0134088_104152422	3300010304	Grasslands Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQR
Ga0134067_101022453	3300010321	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAIGQALSHLENIQ*
Ga0134064_100320353	3300010325	Grasslands Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIRRS*
Ga0134080_101273952	3300010333	Grasslands Soil	MTAELEWIKLYRASLRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0134071_101346552	3300010336	Grasslands Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRTK*
Ga0137364_102438952	3300012198	Vadose Zone Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEPKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRAK*
Ga0137383_103915551	3300012199	Vadose Zone Soil	MCAMPEHIDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISDALSHLENIQRTK*
Ga0137383_105705081	3300012199	Vadose Zone Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISEALS
Ga0137383_108467931	3300012199	Vadose Zone Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIRRG*
Ga0137376_101633153	3300012208	Vadose Zone Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEPKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRTK*
Ga0137376_113427042	3300012208	Vadose Zone Soil	MSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS
Ga0137377_110719691	3300012211	Vadose Zone Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMQQALRMAVEYEDSDQRHAISDALSHLENIRRS*
Ga0137370_100637716	3300012285	Vadose Zone Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS*
Ga0137370_107690321	3300012285	Vadose Zone Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEPKNAMKKALRMAVEYEDSDQRHAISEALSHLENI
Ga0137387_102766341	3300012349	Vadose Zone Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSQLENIQRTK*
Ga0137371_100248793	3300012356	Vadose Zone Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRAK*
Ga0137384_103585882	3300012357	Vadose Zone Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISDALSHLENIQRAK*
Ga0137385_109616391	3300012359	Vadose Zone Soil	MSEHLDWMKLYRAALRETNPEKQPARLEEAKNAMRQALRMAVEYEDSDQRHAIGEALSHLENI*
Ga0137385_110200321	3300012359	Vadose Zone Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHL
Ga0137385_115755472	3300012359	Vadose Zone Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHL
Ga0137358_108552391	3300012582	Vadose Zone Soil	HRRCAMPEHLDWIKLYRAALHETDPEKQVSRIEEAKRAMKLALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0134110_102421732	3300012975	Grasslands Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQLHAISEALSHLENIQRTK*
Ga0134087_100376133	3300012977	Grasslands Soil	MTAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0134087_105475982	3300012977	Grasslands Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARLEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRAK*
Ga0134089_100148265	3300015358	Grasslands Soil	MCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQLHAISEALSHLEN
Ga0134085_101827271	3300015359	Grasslands Soil	MKLYRVALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS*
Ga0134074_10959521	3300017657	Grasslands Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRTK
Ga0134083_103626092	3300017659	Grasslands Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQGS
Ga0066655_100988282	3300018431	Grasslands Soil	MKLYRVALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS
Ga0066655_104825522	3300018431	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRYAIGEALSHLENIRRS
Ga0066655_106210363	3300018431	Grasslands Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS
Ga0066667_101333183	3300018433	Grasslands Soil	MCQMSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIGQALSHLENIQ
Ga0066667_101495082	3300018433	Grasslands Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRTK
Ga0066667_103324322	3300018433	Grasslands Soil	MSEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIRRG
Ga0066667_107464111	3300018433	Grasslands Soil	MPEHLDWIKLYRAALHETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIRR
Ga0066667_108106052	3300018433	Grasslands Soil	MSEHLDWTKLYRAALRETNPEKQPARLEEAKNAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS
Ga0066667_120241451	3300018433	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRG
Ga0066662_121570271	3300018468	Grasslands Soil	MTAELEWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS
Ga0066669_101286385	3300018482	Grasslands Soil	EWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQR
Ga0066669_101347424	3300018482	Grasslands Soil	SEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIRRG
Ga0207693_110329642	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSEHLDWMKFYRAALRETNPEKQPARVEEAKNAMRQALRMAVEYEDSDQRHAISEALSHLENIQRT
Ga0207646_110503051	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSGHLEWINLYRAALRETDPDKLQARIEEAEQAMRQALRSAVEYEDSDQRHTIGEALRHLETVSRV
Ga0207665_111616361	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RVPVRGETMCAMPEHLDWIKLYRAALHETDPEKQPARIEEAKNAMKQALRMAIEYEDSDQRHAISEALSHLENIQRTK
Ga0209237_10899291	3300026297	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS
Ga0209236_12811952	3300026298	Grasslands Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRAK
Ga0209055_10273055	3300026309	Soil	MVKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISEALSHLENIQRS
Ga0209761_12122161	3300026313	Grasslands Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLEHIQRS
Ga0209471_10503912	3300026318	Soil	MTAELEWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS
Ga0209801_11289372	3300026326	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRT
Ga0209266_10596903	3300026327	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQLHAISEALSHLENIQRTK
Ga0209802_11710671	3300026328	Soil	MWCVVPVRRETMCAMPEHLDWIKLYRAALHETDPEKQAARIEEAKNAMKKALRMAVEYEDSDQRHAISEALSHLENIQRTK
Ga0209057_10373786	3300026342	Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIRRS
Ga0209808_10199433	3300026523	Soil	MTAEREWIKLYRAALRETDPDKQPARVEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRG
Ga0209806_10286182	3300026529	Soil	MCQMSEHLDWMKLYRAALRETNPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISEALSHLENIRRG
Ga0209806_11149553	3300026529	Soil	MIAELEWIKLYRAALRETDPEKQVSRIEEAKRAMKQALRMAVEYEDSDQRHAISEALSH
Ga0209807_10767972	3300026530	Soil	MSEHLDWMKLYRGVLRETNPEKRPARLEEAKNAMKQALRMAVEYEDSDQRHAIGQALSHLENIQ
Ga0209807_11707623	3300026530	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAIGEALSHLENIRR
Ga0209157_11383882	3300026537	Soil	MWCVVPVRRETMCAMPEHLDWIKLYRAALHETDPEKQAARIEEVKNAMKKALRMAVEYADSDQRHAISEALSHLENIQRTK
Ga0209056_100991826	3300026538	Soil	MTAELEWIKLYRAALRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIGRHPPLPRQRSS
Ga0209056_103668102	3300026538	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIRRS
Ga0209376_11392421	3300026540	Soil	MTAELEWIKLYRASLRETDPEKQPARVEEAKNAMKQALRMAVEYEDSDQRHAISDALSHLENIGRHPPLPRQRSS
Ga0209156_103563582	3300026547	Soil	MIAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAIGEALSHLENIRRS
Ga0209161_100767761	3300026548	Soil	MPEHLDWIKLYRAALHETDPEKQAARIEEAKNAKALRMAVEYEDSDQRHAISEALSHLENIQRAK
Ga0209161_103386891	3300026548	Soil	MIAELESIKLYRAALRETDPEKQVSRIEEAKRAMKQALRMAVEYEDSDQRHAISEALS
Ga0209689_13080952	3300027748	Soil	MTAELEWIKLYRAALRETDPEKQPARIEEAKRAMKQALRMAVEYEDSDQRHAISDALSHLENIQRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062192

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences