Metagenome / Metatranscriptome Family F062169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	51 residues
Representative Sequence	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMEIHDVVVDHLVENTFMY
Number of Associated Samples	105
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.99 %
% of genes near scaffold ends (potentially truncated)	34.35 %
% of genes from short scaffolds (< 2000 bps)	85.50 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.359 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (35.878 % of family members)
Environment Ontology (ENVO)	Unclassified (81.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.39% β-sheet: 0.00% Coil/Unstructured: 19.61%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02086	MethyltransfD12	2.29
PF04285	DUF444	1.53
PF01171	ATP_bind_3	1.53
PF01434	Peptidase_M41	0.76
PF00478	IMPDH	0.76
PF00291	PALP	0.76
PF00154	RecA	0.76
PF04545	Sigma70_r4	0.76
PF14579	HHH_6	0.76
PF00692	dUTPase	0.76
PF00155	Aminotran_1_2	0.76
PF03332	PMM	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	2.29
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	2.29
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.53
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.53
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.53
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.53
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.53
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.53
COG2718	Uncharacterized conserved protein YeaH/YhbH, required for sporulation, DUF444 family	General function prediction only [R]	1.53
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.76
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.76
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.76
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
All Organisms	root	All Organisms	36.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
cellular organisms	root	All Organisms → cellular organisms	22.14 %
Viruses	superkingdom	All Organisms → Viruses	14.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.05 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Balneolaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	3.05 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Balneolia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3.05 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Balneolales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3.05 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Balneolaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	3.05 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Balneola	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	3.05 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
unclassified Balneola	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	3.05 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.36 %
Balneola sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.50 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	3.05 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10010948	Not Available	5827	Open in IMG/M
3300000115\|DelMOSum2011_c10169451	Not Available	631	Open in IMG/M
3300000117\|DelMOWin2010_c10089645	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300000117\|DelMOWin2010_c10128940	Not Available	869	Open in IMG/M
3300000117\|DelMOWin2010_c10234378	Not Available	545	Open in IMG/M
3300001450\|JGI24006J15134_10014014	Not Available	3837	Open in IMG/M
3300001450\|JGI24006J15134_10040681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1969	Open in IMG/M
3300001450\|JGI24006J15134_10177553	Not Available	671	Open in IMG/M
3300002242\|KVWGV2_10222094	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	9277	Open in IMG/M
3300002242\|KVWGV2_10337832	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	2760	Open in IMG/M
3300005514\|Ga0066866_10195109	Not Available	712	Open in IMG/M
3300005593\|Ga0066837_10096584	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1090	Open in IMG/M
3300005605\|Ga0066850_10282306	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	588	Open in IMG/M
3300006027\|Ga0075462_10003229	All Organisms → cellular organisms → Bacteria	5310	Open in IMG/M
3300006027\|Ga0075462_10066179	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300006164\|Ga0075441_10343228	Not Available	543	Open in IMG/M
3300006165\|Ga0075443_10066854	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1216	Open in IMG/M
3300006191\|Ga0075447_10280330	Not Available	537	Open in IMG/M
3300006735\|Ga0098038_1034864	Not Available	1866	Open in IMG/M
3300006736\|Ga0098033_1098004	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	835	Open in IMG/M
3300006751\|Ga0098040_1143078	Not Available	709	Open in IMG/M
3300006752\|Ga0098048_1021092	All Organisms → Viruses → Predicted Viral	2182	Open in IMG/M
3300006754\|Ga0098044_1032102	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	2304	Open in IMG/M
3300006754\|Ga0098044_1134235	Not Available	998	Open in IMG/M
3300006754\|Ga0098044_1153806	Not Available	921	Open in IMG/M
3300006754\|Ga0098044_1205403	Not Available	774	Open in IMG/M
3300006789\|Ga0098054_1061734	All Organisms → Viruses → Predicted Viral	1424	Open in IMG/M
3300006790\|Ga0098074_1002415	Not Available	8475	Open in IMG/M
3300006793\|Ga0098055_1063829	Not Available	1466	Open in IMG/M
3300006793\|Ga0098055_1377256	Not Available	526	Open in IMG/M
3300006802\|Ga0070749_10081121	All Organisms → Viruses → Predicted Viral	1937	Open in IMG/M
3300006916\|Ga0070750_10155294	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300006919\|Ga0070746_10160070	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1092	Open in IMG/M
3300006919\|Ga0070746_10250193	Not Available	828	Open in IMG/M
3300006921\|Ga0098060_1056551	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1152	Open in IMG/M
3300006922\|Ga0098045_1149758	Not Available	537	Open in IMG/M
3300006922\|Ga0098045_1166789	Not Available	501	Open in IMG/M
3300006925\|Ga0098050_1104096	Not Available	725	Open in IMG/M
3300007236\|Ga0075463_10040296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1522	Open in IMG/M
3300007963\|Ga0110931_1089626	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	928	Open in IMG/M
3300007963\|Ga0110931_1135085	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	741	Open in IMG/M
3300008216\|Ga0114898_1011887	Not Available	3299	Open in IMG/M
3300008219\|Ga0114905_1080178	Not Available	1155	Open in IMG/M
3300009071\|Ga0115566_10314697	Not Available	920	Open in IMG/M
3300009074\|Ga0115549_1026812	All Organisms → Viruses → Predicted Viral	2216	Open in IMG/M
3300009173\|Ga0114996_10136180	Not Available	2037	Open in IMG/M
3300009418\|Ga0114908_1245025	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	545	Open in IMG/M
3300009433\|Ga0115545_1096278	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300009435\|Ga0115546_1162472	Not Available	783	Open in IMG/M
3300009472\|Ga0115554_1371816	Not Available	560	Open in IMG/M
3300009497\|Ga0115569_10074136	All Organisms → Viruses → Predicted Viral	1787	Open in IMG/M
3300009508\|Ga0115567_10802952	Not Available	561	Open in IMG/M
3300009593\|Ga0115011_10425682	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300009605\|Ga0114906_1186143	Not Available	700	Open in IMG/M
3300010148\|Ga0098043_1164519	Not Available	624	Open in IMG/M
3300010149\|Ga0098049_1094521	Not Available	937	Open in IMG/M
3300010296\|Ga0129348_1053708	All Organisms → Viruses → Predicted Viral	1450	Open in IMG/M
3300010368\|Ga0129324_10244360	Not Available	717	Open in IMG/M
3300010883\|Ga0133547_10870237	Not Available	1760	Open in IMG/M
3300010883\|Ga0133547_11984593	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300010883\|Ga0133547_12169176	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1010	Open in IMG/M
3300011258\|Ga0151677_1081945	Not Available	512	Open in IMG/M
3300012952\|Ga0163180_10447408	Not Available	955	Open in IMG/M
3300012953\|Ga0163179_10264670	Not Available	1346	Open in IMG/M
3300012953\|Ga0163179_10424120	Not Available	1084	Open in IMG/M
3300012953\|Ga0163179_11130644	Not Available	689	Open in IMG/M
3300012954\|Ga0163111_11262543	Not Available	723	Open in IMG/M
3300016771\|Ga0182082_1274796	Not Available	596	Open in IMG/M
3300017719\|Ga0181390_1123709	Not Available	672	Open in IMG/M
3300017728\|Ga0181419_1177982	Not Available	504	Open in IMG/M
3300017738\|Ga0181428_1095585	Not Available	694	Open in IMG/M
3300017748\|Ga0181393_1060881	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300017749\|Ga0181392_1165051	Not Available	646	Open in IMG/M
3300017750\|Ga0181405_1030980	All Organisms → Viruses → Predicted Viral	1455	Open in IMG/M
3300017760\|Ga0181408_1087652	Not Available	814	Open in IMG/M
3300017760\|Ga0181408_1100452	Not Available	754	Open in IMG/M
3300017764\|Ga0181385_1191498	Not Available	618	Open in IMG/M
3300017765\|Ga0181413_1003990	All Organisms → cellular organisms → Bacteria	4614	Open in IMG/M
3300017767\|Ga0181406_1098945	Not Available	884	Open in IMG/M
3300017775\|Ga0181432_1056311	All Organisms → Viruses → Predicted Viral	1110	Open in IMG/M
3300017776\|Ga0181394_1110456	Not Available	873	Open in IMG/M
3300017949\|Ga0181584_10122043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1767	Open in IMG/M
3300017952\|Ga0181583_10702908	Not Available	600	Open in IMG/M
3300017967\|Ga0181590_11078393	Not Available	520	Open in IMG/M
3300017968\|Ga0181587_10966184	Not Available	524	Open in IMG/M
3300019765\|Ga0194024_1161101	Not Available	529	Open in IMG/M
3300020165\|Ga0206125_10000296	All Organisms → cellular organisms → Bacteria	66241	Open in IMG/M
3300020165\|Ga0206125_10050877	All Organisms → Viruses → Predicted Viral	2012	Open in IMG/M
3300020165\|Ga0206125_10065123	All Organisms → Viruses → Predicted Viral	1680	Open in IMG/M
3300020165\|Ga0206125_10150285	Not Available	937	Open in IMG/M
3300020165\|Ga0206125_10274244	Not Available	637	Open in IMG/M
3300020438\|Ga0211576_10498766	Not Available	615	Open in IMG/M
3300021365\|Ga0206123_10059258	Not Available	1947	Open in IMG/M
3300021365\|Ga0206123_10290615	Not Available	698	Open in IMG/M
3300021958\|Ga0222718_10025359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	4043	Open in IMG/M
3300021958\|Ga0222718_10139640	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1380	Open in IMG/M
3300021958\|Ga0222718_10324094	Not Available	792	Open in IMG/M
3300022178\|Ga0196887_1036058	Not Available	1342	Open in IMG/M
3300022937\|Ga0255770_10193602	Not Available	1028	Open in IMG/M
3300023116\|Ga0255751_10298523	Not Available	842	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10325572	Not Available	581	Open in IMG/M
3300024344\|Ga0209992_10167856	Not Available	947	Open in IMG/M
3300025070\|Ga0208667_1068182	Not Available	541	Open in IMG/M
3300025096\|Ga0208011_1095039	Not Available	638	Open in IMG/M
3300025098\|Ga0208434_1048636	Not Available	935	Open in IMG/M
3300025099\|Ga0208669_1037634	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1151	Open in IMG/M
3300025102\|Ga0208666_1098347	Not Available	724	Open in IMG/M
3300025108\|Ga0208793_1121974	Not Available	711	Open in IMG/M
3300025120\|Ga0209535_1019798	Not Available	3440	Open in IMG/M
3300025122\|Ga0209434_1188512	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	541	Open in IMG/M
3300025128\|Ga0208919_1081435	Not Available	1061	Open in IMG/M
3300025132\|Ga0209232_1045499	Not Available	1624	Open in IMG/M
3300025138\|Ga0209634_1069188	Not Available	1665	Open in IMG/M
3300025138\|Ga0209634_1153007	Not Available	938	Open in IMG/M
3300025141\|Ga0209756_1065473	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1696	Open in IMG/M
3300025251\|Ga0208182_1002667	Not Available	6983	Open in IMG/M
3300025277\|Ga0208180_1074397	Not Available	806	Open in IMG/M
3300025280\|Ga0208449_1109912	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	640	Open in IMG/M
3300025621\|Ga0209504_1168822	Not Available	507	Open in IMG/M
3300025630\|Ga0208004_1062270	Not Available	970	Open in IMG/M
3300025632\|Ga0209194_1024676	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300025759\|Ga0208899_1027073	All Organisms → Viruses → Predicted Viral	2749	Open in IMG/M
3300026269\|Ga0208766_1173221	Not Available	539	Open in IMG/M
3300027714\|Ga0209815_1202525	Not Available	612	Open in IMG/M
3300027771\|Ga0209279_10062111	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1058	Open in IMG/M
3300027906\|Ga0209404_11069474	Not Available	554	Open in IMG/M
3300029448\|Ga0183755_1011020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	3538	Open in IMG/M
3300029635\|Ga0135217_103479	Not Available	812	Open in IMG/M
3300031627\|Ga0302118_10509939	Not Available	527	Open in IMG/M
3300031851\|Ga0315320_10248616	All Organisms → Viruses → Predicted Viral	1289	Open in IMG/M
3300031886\|Ga0315318_10400416	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	786	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.24%
Freshwater	Environmental → Aquatic → Freshwater	0.76%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	45.04%
Pelagic	Environmental → Aquatic → Marine → Pelagic	12.21%
Coastal	Environmental → Aquatic → Marine → Coastal	9.92%
Strait	Environmental → Aquatic → Marine → Strait	9.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.87%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.82%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.53%
River	Environmental → Aquatic → Freshwater → River	0.76%
Inlet	Environmental → Aquatic → Marine → Inlet	0.76%
Harbor	Environmental → Aquatic → Marine → Harbor	0.76%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	44.27%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	12.21%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.92%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	9.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.63%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.34%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.53%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.53%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.76%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.76%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	35.88%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	9.92%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.63%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	6.87%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	5.34%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.34%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.34%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	5.34%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.82%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.05%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.29%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.53%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.53%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.53%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.76%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.76%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.76%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.76%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029635	Marine harbor viral communities from the Indian Ocean - SMH2	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100109484	3300000101	Marine	MSVQDHIENILNAEGQATLDAWYVAIHEHPQNAMEIHDVVVDHLVENTFLY*
DelMOSum2011_101694513	3300000115	Marine	MSVQNHIENILNAEGQECLDAWYIAINEHPQNAIEIHDVVIDHLVENTFMY*
DelMOWin2010_100896453	3300000117	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
DelMOWin2010_101289404	3300000117	Marine	MSVQEHIENILKAEGQAALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY*
DelMOWin2010_102343782	3300000117	Marine	MSVQNHIENILNAEGQECLDAWYIAINEHPQNAIEIHDVVIDHLVENTFLY*
JGI24006J15134_100140143	3300001450	Marine	MSVQDHIENILNAEGQGALDAWYVAINEHPQNAMEIHDVVVDHLVENTFLY*
JGI24006J15134_100406815	3300001450	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY*
JGI24006J15134_101775533	3300001450	Marine	MSVQNHIENILNAEGQECLDAWYIAINEYPQNAIEIHDVVIDHLVENTFLY*
KVWGV2_102220943	3300002242	Marine Sediment	MSVQDHIENILNAEGQGALDAWYDAIHEXPKNSMDIHKVVVDHLVHETFMKAALY*
KVWGV2_103378323	3300002242	Marine Sediment	MSVQDHIENILNAEGQGALDAWYDAIHEHPKNSMDIHKVVVDHLVHETFMKAALY*
Ga0066866_101951093	3300005514	Marine	MSVQNHIENILNAEGQECLDAWYVAINEHPHNAIEIHDVVIDHLVENTFLY*
Ga0066837_100965843	3300005593	Marine	IRYKERDMPVQEHIENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY*
Ga0066850_102823062	3300005605	Marine	ENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY*
Ga0075462_1000322911	3300006027	Aqueous	MSVQEHIENILNAEGQGALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY*
Ga0075462_100661791	3300006027	Aqueous	IRDSIRCKEREMSVQEHIENILNAEGQAALDAWYVAIHEHPQSAMDIYDEVADHLVANTFMY*
Ga0075441_103432281	3300006164	Marine	PYTCYYKVQGERDMPVQEHIKNILGAVGQGALDAWYIAINEHPQNAMEIHDVVVDHLVENSFLY*
Ga0075443_100668543	3300006165	Marine	MPVQEHIKNILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFML*
Ga0075447_102803302	3300006191	Marine	MPVQQHIDNILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFML*
Ga0098038_10348641	3300006735	Marine	MSVQDHIENILNAQGQECLDAWYVAIHEHPQNAIEIHDVVIDHLVENTFLY*
Ga0098033_10980042	3300006736	Marine	MPVQEHIENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY*
Ga0098040_11430782	3300006751	Marine	MSVQDHIENILNAEGQGALDAWYIAINEYPQNAIEIHDVVIDHLVENTFLY*
Ga0098048_10210926	3300006752	Marine	MSVQDHIENILSAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0098044_10321026	3300006754	Marine	MPVQEHIENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFM
Ga0098044_11342351	3300006754	Marine	ITCKERVMSVQDHIENILNAEGQGALDAWYVAINEHPQNAIEIHDVVIDHLVENTFLY*
Ga0098044_11538064	3300006754	Marine	VQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHDVVVDHLVQETFMKSALY*
Ga0098044_12054031	3300006754	Marine	MSIQDHIENILNAEGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY*
Ga0098054_10617347	3300006789	Marine	MSVQDHIENILNAEGQGVLDAWYIAINEHPQNAIEIHDVVIDHLVENTFLY*
Ga0098074_100241511	3300006790	Marine	MSVQEHIENILNAEGQGALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFLY*
Ga0098055_10638297	3300006793	Marine	QDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0098055_13772561	3300006793	Marine	MSVQNHIENILNAEGQECLDAWYIAINEHPQNAMEIHDVVIDHLVENTFLY*
Ga0070749_100811218	3300006802	Aqueous	MSVQEHIENILNAEGQAALDAWYVAIHEHPQSAMDIYDEVADHLVANTFMY*
Ga0070750_101552941	3300006916	Aqueous	NILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0070746_101600701	3300006919	Aqueous	MSVQDHIKNILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY
Ga0070746_102501932	3300006919	Aqueous	MSVQDHIENILNAEGQECLDAWYIAINEHPQNAIEIHDVVIDHLVENTFLY*
Ga0098060_10565513	3300006921	Marine	MSVQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHKVVVDHLVQETFMKSALY*
Ga0098045_11497581	3300006922	Marine	RERVMSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0098045_11667892	3300006922	Marine	MSVQDHIENILNAEGQECLDAWYVAINEHPQNAIEIHDVVIDHLVENTFLY*
Ga0098050_11040962	3300006925	Marine	MSVQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHKVVVDHLVHETFMKAALY*
Ga0075463_100402961	3300007236	Aqueous	HIENILNAEGQGALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY*
Ga0110931_10896262	3300007963	Marine	MSVQDHIENILNAEGQGALDAWYDAINEHPKKSMDIHKVVVDHLVQETFMKSALY*
Ga0110931_11350852	3300007963	Marine	MSVQDHIENILNAEGQGALDAWYDAISEHPKNSMDIHKVVVDHLVHETFMKAALY*
Ga0114898_10118872	3300008216	Deep Ocean	MPVQEHIEKILGAVGQGALDAWYDAINEHPQNAMEIHDVVVEHLVENTFMY*
Ga0114905_10801785	3300008219	Deep Ocean	MPVQEHIKNILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY*
Ga0115566_103146972	3300009071	Pelagic Marine	MSVQDHIENILNAEGQECLDAWYVAINEYPQNAMEIHDVVVDHLVENTFLY*
Ga0115549_10268124	3300009074	Pelagic Marine	MSVQDHIENILNAEGQGALDAWNVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0114996_101361807	3300009173	Marine	MPVQEHIKNILGAVGQGALDAWYIAINEHPQNAMEIHDVVVDHLVENSFMY*
Ga0114908_12450251	3300009418	Deep Ocean	ILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY*
Ga0115545_10962781	3300009433	Pelagic Marine	MSVQDHIENILNAEGQECLDAWYVAINEYPQNAMEIHDVVVD
Ga0115546_11624723	3300009435	Pelagic Marine	IENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0115554_13718161	3300009472	Pelagic Marine	MSVQDHIENILNAEGQGALDAWYVAINEYPQNAMEIHDVVVDHLVENTFLY*
Ga0115569_100741361	3300009497	Pelagic Marine	KERTMSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY*
Ga0115567_108029523	3300009508	Pelagic Marine	VRERVMSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY*
Ga0115011_104256821	3300009593	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDVVIDHLVENTFLY*
Ga0114906_11861431	3300009605	Deep Ocean	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDVVVDHLVANSFMY*
Ga0098043_11645191	3300010148	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFLY*
Ga0098049_10945211	3300010149	Marine	RVMSVQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHKVVVDHLVQETFMKSALY*
Ga0129348_10537081	3300010296	Freshwater To Marine Saline Gradient	MSVQEHIENILNAEGQAALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY*
Ga0129324_102443601	3300010368	Freshwater To Marine Saline Gradient	MSVQNHIENILNAEGQECLDAWYIAINEHPQNAIEIHDVVIDHL
Ga0133547_108702376	3300010883	Marine	MPVKEHIENILNAEGQGALDAWYDAIKEHPQDAMKIHDVVVDHLVENTFLY*
Ga0133547_119845934	3300010883	Marine	MPVQEHIKNILAAVGQGALDAWYIAINEHPQNAMEIHDVVVDHLVENSFLY*
Ga0133547_121691765	3300010883	Marine	MSVQQHIDNILGAVGQGALDAWYDAINAHPQNAMDIHEVVVDHLVENTFMF*
Ga0151677_10819452	3300011258	Marine	MSVQDHIENILDAEGQAALDAWYVAIHEHPQNAMDIHDVVVDHLVANTFMY*
Ga0163180_104474084	3300012952	Seawater	MSVQDHIENILNAEGQGALDAWYVAIHEHPKNAMDIHDEVVDHLVANTFLY*
Ga0163179_102646703	3300012953	Seawater	MSVQDHIENILNAEGQAALDAWYVAIHEHPKNAMDIHDVVVDHLVENTFLY*
Ga0163179_104241204	3300012953	Seawater	MSVQDHIENILNAEGQGALDAWYVAIHEHPKNAMDIHDVVIDHLVENTFLY*
Ga0163179_111306443	3300012953	Seawater	VMSVQDHIENILNAEGQGALDAWYVAINEYPQNAMEIHDVVVDHLVENTFLY*
Ga0163111_112625432	3300012954	Surface Seawater	MSVQNHIENILNAEGQECLDAWYVAINEHPQNAIEIHDVVIDHLVENTFLY*
Ga0182082_12747961	3300016771	Salt Marsh	MSVQEHIENILNAEGQAALDAWYVAIHEHPQSSMDIHDEVVDHLVANTFM
Ga0181390_11237092	3300017719	Seawater	MSVQDHIESILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFLY
Ga0181419_11779823	3300017728	Seawater	ENILNAEGQGALDAWYDAIKEHPQDAMKIHDVVVDHLVENTFLC
Ga0181428_10955852	3300017738	Seawater	MSVQDHIENILNAEGQECLDAWYVAIHEHPKNAMDIHDVVVDHLVENTFLL
Ga0181393_10608811	3300017748	Seawater	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHL
Ga0181392_11650514	3300017749	Seawater	QDHIESILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY
Ga0181405_10309807	3300017750	Seawater	MSVQDHIESRLNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY
Ga0181408_10876524	3300017760	Seawater	MSVQDHIENILNAEGQGALDAWYVAINEYPQNAMEIHDVVVDHLVE
Ga0181408_11004521	3300017760	Seawater	VMSVQDHIENILNAEGQGALDAWYVAIHEHPKNAMDIHDVVVDHLVENTFLL
Ga0181385_11914982	3300017764	Seawater	MSVQDHIENILSAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFLY
Ga0181413_100399010	3300017765	Seawater	MSVQNHIENILNAEGQECLDAWYVAINEYPQNAIEIHDVVIDHLVENTFLY
Ga0181406_10989452	3300017767	Seawater	MSVQDHIENILNAEGQGALDAWYVAINEYPQNAMEIHDVVVDHLVENTFLL
Ga0181432_10563113	3300017775	Seawater	MPVQEHIENILGAVGQGALDAWYDAINEHPQSAMEIHDVVVEHLVENTFMY
Ga0181394_11104564	3300017776	Seawater	IESILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY
Ga0181584_101220436	3300017949	Salt Marsh	MSVQEHIENILNAEGQAALDAWYVAIHEHPQSSMDIHDEVVDHLVANTFMY
Ga0181583_107029081	3300017952	Salt Marsh	IENILNAEGQAALDAWYVAIHEHPQSSMDIHDEVVDHLVANTFMY
Ga0181590_110783932	3300017967	Salt Marsh	MSVQEHIENILNAEGQGALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFLY
Ga0181587_109661841	3300017968	Salt Marsh	MSVQEHIENILNAEGQAALDAWYVAIHEHAQSSMDIHDEVVDHLVANTFMY
Ga0194024_11611011	3300019765	Freshwater	MSVQEHIENILNAEGQGALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY
Ga0206125_1000029663	3300020165	Seawater	MSVQDHIENILNAEGQECLDAWYVAINEYPQNAMEIHDVVVDHLVENTFLY
Ga0206125_100508776	3300020165	Seawater	MSVQDHIENILNAEGQGALDAWYVAINEHPQNAIEIHDVVIDHLVENTFLY
Ga0206125_100651237	3300020165	Seawater	KERTMSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY
Ga0206125_101502854	3300020165	Seawater	IHSNIRCKERTMSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDVVVDHLVENTFLY
Ga0206125_102742441	3300020165	Seawater	VQDHIENILNAEGQVALDAWYVAIHEHPKNAMDIHDVVIDHLVENTFLY
Ga0211576_104987661	3300020438	Marine	VRERVMSVQDHIENILNAEGQGALDAWYVAINEYPQNAMEIHDVVVDHLVENTFLY
Ga0206123_100592583	3300021365	Seawater	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY
Ga0206123_102906154	3300021365	Seawater	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDVVVDHLVENTFLY
Ga0222718_1002535912	3300021958	Estuarine Water	MSVQDHIENILSAEGQGALDAWYIAIHEHPQNAMDIHDEVVDHLVANSFMY
Ga0222718_101396404	3300021958	Estuarine Water	MSVQDHIQNILNAKGQGALDAWYVAIHEYPQNAMDIHDEVVDHLVENTFLL
Ga0222718_103240943	3300021958	Estuarine Water	MSVQDHIESILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFMY
Ga0196887_10360582	3300022178	Aqueous	MSVQDHIENILNAEGQATLDAWYVAIHEHPQNAMEIHDVVVDHLVENTFLY
Ga0255770_101936021	3300022937	Salt Marsh	LNAEGQAALDAWYVAIHEHPQSSMDIHDEVVDHLVANTFMY
Ga0255751_102985231	3300023116	Salt Marsh	MSVQEHIENILNAEGQAALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY
(restricted) Ga0233438_103255721	3300024255	Seawater	MSVQDHIENILNAEGQGALDAWYVAINEHPQNAMEIHDVVVDHLVENTFLY
Ga0209992_101678562	3300024344	Deep Subsurface	MSVQDHIENILNAEGQGALDAWYVAINEYPQNAMEIHDVVVDHLVENTFLY
Ga0208667_10681822	3300025070	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY
Ga0208011_10950392	3300025096	Marine	MSVQDHIENILNAEGQGALDAWYIAINEYPQNAIEIHDVVIDHLVENTFLY
Ga0208434_10486363	3300025098	Marine	MSVQDHIENILSAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY
Ga0208669_10376342	3300025099	Marine	MSVQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHKVVVDHLVQETFMKSALY
Ga0208666_10983471	3300025102	Marine	MSVQDHIENILNAQGQECLDAWYVAIHEHPQNAIEIHDVVIDHLVENTFLY
Ga0208793_11219741	3300025108	Marine	IHSNIRYKERTMSVQNHIENILNAEGQECLDAWYIAINEHPQNAMEIHDVVIDHLVENTFLY
Ga0209535_101979810	3300025120	Marine	MSVQNHIENILNAEGQECLDAWYIAINEHPQNAIEIHDVVIDHLVENTFLY
Ga0209434_11885123	3300025122	Marine	MPVQEHIKNILGAVGQGALDAWYDAINEHPQNAMEIHDVVVD
Ga0208919_10814355	3300025128	Marine	YKERAMSVQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHKVVVDHLVQETFMKSALY
Ga0209232_10454996	3300025132	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQDAMDIHDEVVDHLVANSFMY
Ga0209634_10691885	3300025138	Marine	MPVKEHIENILNAEGQGALDAWYDAIKEHPQDAMKIHDVVVDHLVENTFLY
Ga0209634_11530072	3300025138	Marine	MSVQNHIENILNAEGQECLDAWYIAINEYPQNAIEIHDVVIDHLVENTFLY
Ga0209756_10654731	3300025141	Marine	MSVQDHIENILNAEGQGALDAWYDAINEHPKNSMDIHKVVVDHLVHETFMKSALY
Ga0208182_100266715	3300025251	Deep Ocean	MPVQEHIEKILGAVGQGALDAWYDAINEHPQNAMEIHDVVVEHLVENTFMY
Ga0208180_10743971	3300025277	Deep Ocean	YYKVQGERDMPVQEHIENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY
Ga0208449_11099121	3300025280	Deep Ocean	QEHIENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY
Ga0209504_11688223	3300025621	Pelagic Marine	QDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANSFMY
Ga0208004_10622701	3300025630	Aqueous	IRCKEREMSVQEHIENILNAEGQAALDAWYVAIHEHPQSAMDIHDEVVDHLVANTFMY
Ga0209194_10246764	3300025632	Pelagic Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVENTFMY
Ga0208899_10270736	3300025759	Aqueous	MSVQEHIENILNAEGQAALDAWYVAIHEHPQSAMDIYDEVADHLVANTFMY
Ga0208766_11732212	3300026269	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMEIHDVVVDHLVENTFMY
Ga0209815_12025253	3300027714	Marine	PYTCYYKVQGERDMPVQEHIKNILGAVGQGALDAWYIAINEHPQNAMEIHDVVVDHLVENSFLY
Ga0209279_100621111	3300027771	Marine	EKDMPVQEHIKNILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFML
Ga0209404_110694741	3300027906	Marine	SNIRCKERTMSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDVVIDHLVENTFLY
Ga0183755_101102010	3300029448	Marine	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDVVIDHLVENTFLY
Ga0135217_1034792	3300029635	Marine Harbor	MSVQEHIENILKAEGQAALDAWYNAIHEHPQSAMDIHDEVVDHLVANTFMY
Ga0302118_105099392	3300031627	Marine	MPVQEHIKNILAAVGQGALDAWYIAINEHPQNAMEIHDVVVDHLVENSFMY
Ga0315320_102486165	3300031851	Seawater	MSVQDHIENILNAEGQGALDAWYVAIHEHPQNAMDIHDEVVDHLVANTFLY
Ga0315318_104004164	3300031886	Seawater	MPVQEHIENILGAVGQGALDAWYDAINEHPQNAMEIHDVVVDHLVENTFMY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters