Metagenome Family F062156

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062156
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	44 residues
Representative Sequence	MEYLDEIINMRIKPSDKEKLTAKANEDNLSVSAYCRVKLTKELKQE
Number of Associated Samples	80
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.29 %
% of genes near scaffold ends (potentially truncated)	19.08 %
% of genes from short scaffolds (< 2000 bps)	72.52 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.305 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (22.137 % of family members)
Environment Ontology (ENVO)	Unclassified (92.366 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (74.809 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13481	AAA_25	3.05
PF07503	zf-HYPF	2.29
PF01223	Endonuclease_NS	2.29
PF01878	EVE	2.29
PF00050	Kazal_1	1.53
PF12728	HTH_17	1.53
PF14311	DUF4379	1.53
PF00378	ECH_1	0.76
PF14310	Fn3-like	0.76
PF02195	ParBc	0.76
PF00664	ABC_membrane	0.76
PF01807	zf-CHC2	0.76
PF08125	Mannitol_dh_C	0.76
PF01939	NucS	0.76
PF13181	TPR_8	0.76
PF12040	DUF3526	0.76
PF00411	Ribosomal_S11	0.76
PF01259	SAICAR_synt	0.76
PF00884	Sulfatase	0.76
PF14088	DUF4268	0.76
PF03382	DUF285	0.76
PF13385	Laminin_G_3	0.76
PF05199	GMC_oxred_C	0.76
PF13620	CarboxypepD_reg	0.76
PF00145	DNA_methylase	0.76
PF01402	RHH_1	0.76
PF03572	Peptidase_S41	0.76
PF07681	DoxX	0.76
PF00127	Copper-bind	0.76
PF09903	DUF2130	0.76
PF06325	PrmA	0.76
PF00188	CAP	0.76
PF01555	N6_N4_Mtase	0.76
PF13564	DoxX_2	0.76
PF00808	CBFD_NFYB_HMF	0.76
PF00756	Esterase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0068	Hydrogenase maturation factor HypF (carbamoyltransferase)	Posttranslational modification, protein turnover, chaperones [O]	2.29
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	2.29
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	2.29
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	2.29
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.76
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.76
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.76
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.76
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.76
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.76
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.76
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.76
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.76
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.76
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.76
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.76
COG0246	Mannitol-1-phosphate/altronate dehydrogenases	Carbohydrate transport and metabolism [G]	0.76
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.76
COG0100	Ribosomal protein S11	Translation, ribosomal structure and biogenesis [J]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.89 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.07 %
Unclassified	root	N/A	35.11 %
Viruses	superkingdom	All Organisms → Viruses	3.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.31 %
Unclassified	root	N/A	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	41.22 %
Unclassified	root	N/A	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	41.22 %
Unclassified	root	N/A	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	41.22 %
Unclassified	root	N/A	35.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.11 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	29.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.11 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	29.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.11 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	25.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.11 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	18.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Robiginitalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea	0.76 %
Mesoflavibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mesoflavibacter	0.76 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.11 %
Flavobacteriaceae bacterium TMED120	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	15.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.82 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	3.05 %
Robiginitalea biformata	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea → Robiginitalea biformata	0.76 %
Mesoflavibacter zeaxanthinifaciens	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mesoflavibacter → Mesoflavibacter zeaxanthinifaciens	0.76 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10123808	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300001347\|JGI20156J14371_10079185	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300001347\|JGI20156J14371_10118301	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	804	Open in IMG/M
3300001347\|JGI20156J14371_10140193	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300001348\|JGI20154J14316_10060599	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1497	Open in IMG/M
3300001349\|JGI20160J14292_10035985	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2452	Open in IMG/M
3300001352\|JGI20157J14317_10051425	All Organisms → Viruses → Predicted Viral	1892	Open in IMG/M
3300001352\|JGI20157J14317_10065682	All Organisms → Viruses → Predicted Viral	1528	Open in IMG/M
3300001352\|JGI20157J14317_10086084	Not Available	1201	Open in IMG/M
3300001352\|JGI20157J14317_10133509	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300001352\|JGI20157J14317_10145659	Not Available	747	Open in IMG/M
3300001450\|JGI24006J15134_10196906	Not Available	618	Open in IMG/M
3300003617\|JGI26082J51739_10134880	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	581	Open in IMG/M
3300004279\|Ga0066605_10206069	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	753	Open in IMG/M
3300005239\|Ga0073579_1217145	Not Available	766	Open in IMG/M
3300005837\|Ga0078893_10406369	Not Available	530	Open in IMG/M
3300005837\|Ga0078893_14526296	Not Available	695	Open in IMG/M
3300006165\|Ga0075443_10286316	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	603	Open in IMG/M
3300007231\|Ga0075469_10039282	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	1472	Open in IMG/M
3300007280\|Ga0101452_117624	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2189	Open in IMG/M
3300009071\|Ga0115566_10157100	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	1415	Open in IMG/M
3300009074\|Ga0115549_1153386	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300009077\|Ga0115552_1284418	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	662	Open in IMG/M
3300009172\|Ga0114995_10052877	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	2315	Open in IMG/M
3300009172\|Ga0114995_10717414	Not Available	547	Open in IMG/M
3300009193\|Ga0115551_1084295	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	1506	Open in IMG/M
3300009420\|Ga0114994_10516744	Not Available	786	Open in IMG/M
3300009420\|Ga0114994_11099214	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009420\|Ga0114994_11135614	Not Available	504	Open in IMG/M
3300009422\|Ga0114998_10008848	All Organisms → cellular organisms → Bacteria	6743	Open in IMG/M
3300009423\|Ga0115548_1091224	Not Available	1005	Open in IMG/M
3300009425\|Ga0114997_10003705	All Organisms → cellular organisms → Bacteria	11950	Open in IMG/M
3300009425\|Ga0114997_10405397	Not Available	736	Open in IMG/M
3300009432\|Ga0115005_10985234	Not Available	682	Open in IMG/M
3300009433\|Ga0115545_1241322	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	608	Open in IMG/M
3300009434\|Ga0115562_1007796	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea → Robiginitalea biformata	6425	Open in IMG/M
3300009434\|Ga0115562_1127534	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	972	Open in IMG/M
3300009436\|Ga0115008_11113013	Not Available	595	Open in IMG/M
3300009467\|Ga0115565_10095319	All Organisms → Viruses → Predicted Viral	1409	Open in IMG/M
3300009467\|Ga0115565_10234400	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300009476\|Ga0115555_1187746	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	855	Open in IMG/M
3300009496\|Ga0115570_10453139	Not Available	540	Open in IMG/M
3300009507\|Ga0115572_10344419	Not Available	840	Open in IMG/M
3300009526\|Ga0115004_10540474	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	690	Open in IMG/M
3300009705\|Ga0115000_10254673	All Organisms → cellular organisms → Eukaryota	1145	Open in IMG/M
3300009785\|Ga0115001_10950243	Not Available	515	Open in IMG/M
3300010883\|Ga0133547_10324167	All Organisms → cellular organisms → Bacteria	3185	Open in IMG/M
3300017743\|Ga0181402_1022934	Not Available	1775	Open in IMG/M
3300018041\|Ga0181601_10297701	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300020165\|Ga0206125_10256828	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300020166\|Ga0206128_1026901	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3129	Open in IMG/M
3300020169\|Ga0206127_1005577	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Mesoflavibacter → Mesoflavibacter zeaxanthinifaciens	10538	Open in IMG/M
3300020169\|Ga0206127_1043373	Not Available	2380	Open in IMG/M
3300020182\|Ga0206129_10301313	Not Available	645	Open in IMG/M
3300020253\|Ga0211685_1036378	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	710	Open in IMG/M
3300020317\|Ga0211688_1046012	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300020335\|Ga0211690_1105926	Not Available	602	Open in IMG/M
3300020358\|Ga0211689_1201809	Not Available	540	Open in IMG/M
3300020358\|Ga0211689_1215399	Not Available	518	Open in IMG/M
3300020392\|Ga0211666_10227719	Not Available	710	Open in IMG/M
3300020396\|Ga0211687_10000075	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	85604	Open in IMG/M
3300020396\|Ga0211687_10007540	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	6612	Open in IMG/M
3300020396\|Ga0211687_10009393	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5713	Open in IMG/M
3300020396\|Ga0211687_10009767	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5571	Open in IMG/M
3300020396\|Ga0211687_10042230	Not Available	2095	Open in IMG/M
3300020396\|Ga0211687_10126659	Not Available	1065	Open in IMG/M
3300020452\|Ga0211545_10510480	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	542	Open in IMG/M
3300020463\|Ga0211676_10027886	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4328	Open in IMG/M
3300020463\|Ga0211676_10083497	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2147	Open in IMG/M
3300020469\|Ga0211577_10028620	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4249	Open in IMG/M
3300020469\|Ga0211577_10032561	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3942	Open in IMG/M
3300020475\|Ga0211541_10592708	Not Available	539	Open in IMG/M
3300020595\|Ga0206126_10009717	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7736	Open in IMG/M
3300021185\|Ga0206682_10498285	Not Available	503	Open in IMG/M
3300021365\|Ga0206123_10217451	Not Available	843	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10043842	Not Available	2182	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10024191	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3591	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10046427	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10151097	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1126	Open in IMG/M
3300025137\|Ga0209336_10073313	Not Available	1010	Open in IMG/M
3300025138\|Ga0209634_1121919	Not Available	1111	Open in IMG/M
3300025577\|Ga0209304_1055852	Not Available	1018	Open in IMG/M
3300025620\|Ga0209405_1010924	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	4324	Open in IMG/M
3300025620\|Ga0209405_1118576	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	728	Open in IMG/M
3300025626\|Ga0209716_1012877	All Organisms → cellular organisms → Bacteria	3713	Open in IMG/M
3300025626\|Ga0209716_1028433	All Organisms → Viruses → Predicted Viral	2106	Open in IMG/M
3300025626\|Ga0209716_1028600	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300025640\|Ga0209198_1095931	Not Available	935	Open in IMG/M
3300025696\|Ga0209532_1006505	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6841	Open in IMG/M
3300025696\|Ga0209532_1108368	Not Available	936	Open in IMG/M
3300025832\|Ga0209307_1018195	All Organisms → cellular organisms → Bacteria	3093	Open in IMG/M
3300025849\|Ga0209603_1065811	Not Available	1791	Open in IMG/M
3300025880\|Ga0209534_10445345	Not Available	547	Open in IMG/M
3300025880\|Ga0209534_10486265	Not Available	511	Open in IMG/M
3300025886\|Ga0209632_10073207	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2087	Open in IMG/M
3300025886\|Ga0209632_10473925	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	578	Open in IMG/M
3300027687\|Ga0209710_1049678	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	1908	Open in IMG/M
3300027687\|Ga0209710_1147286	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	859	Open in IMG/M
3300027779\|Ga0209709_10001433	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	22053	Open in IMG/M
3300027801\|Ga0209091_10355176	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	676	Open in IMG/M
3300027830\|Ga0209359_10272713	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	770	Open in IMG/M
3300027849\|Ga0209712_10539687	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031142\|Ga0308022_1128566	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	740	Open in IMG/M
3300031143\|Ga0308025_1136120	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	880	Open in IMG/M
3300031510\|Ga0308010_1013234	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300031598\|Ga0308019_10052116	Not Available	1747	Open in IMG/M
3300031599\|Ga0308007_10126512	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	925	Open in IMG/M
3300031630\|Ga0308004_10060340	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300031630\|Ga0308004_10104659	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1207	Open in IMG/M
3300031630\|Ga0308004_10115508	Not Available	1139	Open in IMG/M
3300031630\|Ga0308004_10227110	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	748	Open in IMG/M
3300031630\|Ga0308004_10395946	Not Available	512	Open in IMG/M
3300031659\|Ga0307986_10031071	All Organisms → Viruses → Predicted Viral	2955	Open in IMG/M
3300031659\|Ga0307986_10114930	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1289	Open in IMG/M
3300031659\|Ga0307986_10228147	Not Available	816	Open in IMG/M
3300031702\|Ga0307998_1003407	All Organisms → cellular organisms → Bacteria	7858	Open in IMG/M
3300031702\|Ga0307998_1012166	All Organisms → cellular organisms → Bacteria	3810	Open in IMG/M
3300031702\|Ga0307998_1015589	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	3314	Open in IMG/M
3300031702\|Ga0307998_1041428	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1863	Open in IMG/M
3300031702\|Ga0307998_1048047	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300031702\|Ga0307998_1058319	Not Available	1509	Open in IMG/M
3300031702\|Ga0307998_1071804	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1325	Open in IMG/M
3300031702\|Ga0307998_1079982	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1239	Open in IMG/M
3300031702\|Ga0307998_1112947	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300031702\|Ga0307998_1125436	Not Available	926	Open in IMG/M
3300031702\|Ga0307998_1144078	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	844	Open in IMG/M
3300031702\|Ga0307998_1182663	Not Available	718	Open in IMG/M
3300031702\|Ga0307998_1203901	Not Available	666	Open in IMG/M
3300031702\|Ga0307998_1262138	Not Available	559	Open in IMG/M
3300031702\|Ga0307998_1262929	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031702\|Ga0307998_1301660	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium TMED120	507	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	37.40%
Pelagic	Environmental → Aquatic → Marine → Pelagic	22.14%
Oceanic	Environmental → Aquatic → Marine → Oceanic	18.32%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	12.98%
Inlet	Environmental → Aquatic → Marine → Inlet	3.05%
Coastal	Environmental → Aquatic → Marine → Coastal	3.05%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.29%
Strait	Environmental → Aquatic → Marine → Strait	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	37.40%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	22.14%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	18.32%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	12.98%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.53%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.76%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	22.14%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	17.56%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	16.79%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.27%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	12.21%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	5.34%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.05%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	2.29%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.76%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.76%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.76%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.76%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.76%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300003617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300007231	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA	Environmental	Open in IMG/M
3300007280	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ18 time point	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020253	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX555982-ERR598945)	Environmental	Open in IMG/M
3300020317	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555998-ERR599027)	Environmental	Open in IMG/M
3300020335	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_101238082	3300000101	Marine	MEYLDEIINRRIKPSDKEKLTALASSDNLSVSTYCRVQLAN*
JGI20156J14371_100791851	3300001347	Pelagic Marine	MEYLDEIINLRIKPSDKEKLIDKANEDNLSVSTYCRVQLTKELKQE*
JGI20156J14371_101183013	3300001347	Pelagic Marine	MEFLDEIINMRLKPSDXEKLIQKAKEKHLSVSTYCRIKLLNEL*
JGI20156J14371_101401932	3300001347	Pelagic Marine	MEYLDEIINLRIKPSDKQKLTTLALSDNLSVSAYCRSRLLNELEQSN*
JGI20154J14316_100605992	3300001348	Pelagic Marine	MEYLDEIINLRIRPSDKQKLTALALSYNLSVSLIAGQGY*
JGI20160J14292_100359856	3300001349	Pelagic Marine	PSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN*
JGI20157J14317_100514256	3300001352	Pelagic Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKKE*
JGI20157J14317_100656822	3300001352	Pelagic Marine	MEYLDEYINVRLKPSDKERLIAKANEDNLSVSAYCRVRLIKELKKE*
JGI20157J14317_100860845	3300001352	Pelagic Marine	MEYLDEIINMRIKPSDKEKLSALASSDNLSVSTYCRVQLTKELKQE*
JGI20157J14317_101335092	3300001352	Pelagic Marine	MEYLDEIINLRIKPSDKEKLIDKANEDNLSVSAYCRVKLTKELKQE*
JGI20157J14317_101456591	3300001352	Pelagic Marine	MEYLDEIINLRIKPSDKEKLISKANEDNLSVSAYCRVKLTKELK*
JGI24006J15134_101969062	3300001450	Marine	MEFLDEIINMRIKPSQKELLQEKANEEGLSISTYCRVKLTKDLEKEI*
JGI26082J51739_101348801	3300003617	Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKLANELTN*
Ga0066605_102060692	3300004279	Marine	MEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN*
Ga0073579_12171452	3300005239	Marine	MEFLDGIINMRLKPSDKEKLIQKAKEKHLSISTYCRVKLLDEL*
Ga0078893_104063692	3300005837	Marine Surface Water	MEFLDEIINMRIKPSQKEILKNKADKEGLSVSTYCRVKLVKDLEE*
Ga0078893_145262962	3300005837	Marine Surface Water	MEYLDEIINMRIKPSDKEKLTAKANEDNLSVSAYCRVKLTKELKQE*
Ga0075443_102863162	3300006165	Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSAYCRSRLLNELEQSN*
Ga0075469_100392822	3300007231	Aqueous	MEFLDEIINMRLKPSDKEKLIQKAKEKHLSVSTYCRIKLLNEL*
Ga0101452_1176241	3300007280	Marine Surface Water	MEYLDEIINMRLKPSDKEKLIAKANEDNLSVSAYCRVKLTKELKQE*
Ga0115566_101571002	3300009071	Pelagic Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRAKLANELTN*
Ga0115549_11533862	3300009074	Pelagic Marine	MEYLDEIINMRIRPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN*
Ga0115552_12844181	3300009077	Pelagic Marine	TPTMEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRAKLANELTN*
Ga0114995_100528773	3300009172	Marine	MEFLDGIINMRLKPSDKEKLIQKAKEKHLSISTYCRIKLLDEL*
Ga0114995_107174142	3300009172	Marine	MEYLDEIINLRIKPSDKEKLTALASSDNLSVSKYCRVQLTKELKQE*
Ga0115551_10842953	3300009193	Pelagic Marine	MEFLDEIINMILKPSDKEKLIQKAKEKHLSVSTYCRIKLLNEL*
Ga0114994_105167441	3300009420	Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKLANELID*
Ga0114994_110992141	3300009420	Marine	NLRIKPSDKEKLTALASSDNLSVSAYCRSRLLNELEQSN*
Ga0114994_111356142	3300009420	Marine	MEYLDEIINMRIKPSDKEKLIAKANEDNLSVSAYCRVRLIKELKQK*
Ga0114998_100088483	3300009422	Marine	MEFLDEIINMRLKPSDKEKLIQKAKEKHLSISTYCRIKLLDEL*
Ga0115548_10912242	3300009423	Pelagic Marine	MRIKPSDKEKLIAKANEDNLSVSAYCRVRLIKELKQK*
Ga0114997_100037056	3300009425	Marine	MEFLDGIINIRLKPSDKEKLIQKAKEKHLSISTYCRIKLLDEL*
Ga0114997_104053973	3300009425	Marine	MGYLDEIINMRIKPSDKEKLTALASSDNLSVSKYCRVQLTKELKQE*
Ga0115005_109852341	3300009432	Marine	IMEYLDEYINVRLKPSDKERLIAKANEDNLSVSAYCRVRLIKELKKE*
Ga0115545_12413221	3300009433	Pelagic Marine	EIINMRLKPSDKEKLIQKAKEKHLSVSTYCRIKLLNEL*
Ga0115562_10077963	3300009434	Pelagic Marine	MEYLDEIINLRIRPSDKQKLTALALSYNLSVSAYCRSRLLNELEQSN*
Ga0115562_11275343	3300009434	Pelagic Marine	MEFLDEIINMRLKPSDEEKLIQKAKEKHLSVSTYCRIKLLNEL*
Ga0115008_111130131	3300009436	Marine	NMRIKPSDKEKLSALASSDNLSVSTYCRVQLTKELKQE*
Ga0115565_100953191	3300009467	Pelagic Marine	IMEYLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKKE*
Ga0115565_102344001	3300009467	Pelagic Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKLANEFID*
Ga0115555_11877461	3300009476	Pelagic Marine	DEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKLANELTN*
Ga0115570_104531391	3300009496	Pelagic Marine	MEYLDEIINVRIKPSDKQKLTALASSDNLSVSTYCRVQLTKELKKE
Ga0115572_103444195	3300009507	Pelagic Marine	MEFLDEIINMRIKPSQKEILKKKAEKENLSVSTYCRVRLIKDITD*
Ga0115004_105404742	3300009526	Marine	MEYLDEIINVRIKPSDKQKLTALALSDNLSVLAYCRSRLLNELE*
Ga0115000_102546733	3300009705	Marine	MEYLDEIINLRIRPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN*
Ga0115001_109502431	3300009785	Marine	MEYLDEIINLRIKPSDKEKLTALASSDNLSVSAYCRSRLLNELE*
Ga0133547_103241672	3300010883	Marine	MEYLDGIINMRLKPSDKEKLIQKAKEKHLSISTYCRIKLLNEL*
Ga0181402_10229342	3300017743	Seawater	MEFLDEIINMRIKPSQKEILKKKAEKENLSVSTYCRVKLVKDLEE
Ga0181601_102977012	3300018041	Salt Marsh	MEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSS
Ga0206125_102568283	3300020165	Seawater	MEYLDEIINLRIKPSDKQKLTTLALSDNLSVSAYCRSRLLNELEQSN
Ga0206128_10269015	3300020166	Seawater	MEFLDEIINMRLKPSDKEKLIQKAKEKHLSVSTYCRIKLLNEL
Ga0206127_10055776	3300020169	Seawater	MEYLDEIINMRIRPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN
Ga0206127_10433732	3300020169	Seawater	LEYLDEIINMRIKPSDKEKLIAKANEDNLSVSAYCRVRLIKELKQK
Ga0206129_103013131	3300020182	Seawater	MEYLDEIINLRIKPSDKEKLISKANEDNLSVSAYCRVKLTKELK
Ga0211685_10363781	3300020253	Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKIANQLNNIKKYAI
Ga0211688_10460122	3300020317	Marine	MEYLDEIINMRIKPTDKQKLTALALSDNLSVSAYCRVQLTKKLKKE
Ga0211690_11059262	3300020335	Marine	MEFLDGIINMRIKPSQKEMLQAKASKEGLSVSTYCRIKLLDEL
Ga0211689_12018091	3300020358	Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKKV
Ga0211689_12153991	3300020358	Marine	TQRMEYLDKIINIRLKPSYKEKLIAKANEDNLSVSAYCRVLSAF
Ga0211666_102277191	3300020392	Marine	MEFLDEIINMRVKPSHKEILKKKADKENLSVSTYCRVKLVKNLTE
Ga0211687_1000007518	3300020396	Marine	MEYLDKIINIRLKPSYKEKLIAKANEDNLSVSAYCRVLSAF
Ga0211687_1000754010	3300020396	Marine	MEYLDEIINMRLKPSDKEKLIAKANEDNLSISAYCRVRLIEELKQN
Ga0211687_100093939	3300020396	Marine	MEYLDEIINMRIKPTDKQKLTALALSDNLSVSAYCRSRLLNELEQSN
Ga0211687_100097675	3300020396	Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVSLRIMLEVYSNV
Ga0211687_100422302	3300020396	Marine	MEYLDEIINMRLKPSDKEKLIAKANEENLSVSAYCRVKLTKELKQE
Ga0211687_101266591	3300020396	Marine	MEYLDEYINVRLKPSDKEKLIAKANEDNLSVSAYCRVRLIKELKKV
Ga0211545_105104802	3300020452	Marine	MEFLDEIINMRVKPSQKEMLQAKANKEGLSVSTYCRVKLVKGLDN
Ga0211676_100278864	3300020463	Marine	MEFLDTYVNVRLKPSQKEVLKEKANKENLSVSAYCRVKLAKELIE
Ga0211676_100834978	3300020463	Marine	MEFLDGIINMRIKPSQKEMLQEKASKEGLSVSTYCRVKLVKDLEQ
Ga0211577_100286203	3300020469	Marine	MEFLDTYVNVRLKPSQKEVLKEKANKENLSVSAYCRVKLAKELEV
Ga0211577_100325612	3300020469	Marine	MEFLDEIINMRVKPSDKEKLIQKAKEKHLSVSTYCRIKLVDEI
Ga0211541_105927082	3300020475	Marine	MEFLDEIINMRIKPSQKEMLQAKANKEGLSVSTYCRVKLVKGLDN
Ga0206126_100097173	3300020595	Seawater	MEYLDEIINMRIRPSDKQKLTAKANEDNLSVSAYCRVKLTKELKQE
Ga0206682_104982851	3300021185	Seawater	MEYLDEIINLRIKPSDKEKLIDKANEDNLSVSAYCRVKLTKELKQ
Ga0206123_102174511	3300021365	Seawater	MEFLDGIINMRLKPSDKEKLIQKANEKHLSVSTYCRIKLLDEL
(restricted) Ga0233426_100438422	3300022920	Seawater	MEYLDEIINLRIKPSDKEKLIDKANEDNLSVSAYCRVKLTKELKQE
(restricted) Ga0233438_100241917	3300024255	Seawater	MEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN
(restricted) Ga0233444_100464273	3300024264	Seawater	MEYLDEIINLRIKPSDKQKLTSLALSDNLSVSAYCRSRLLNELEQSS
(restricted) Ga0233444_101510972	3300024264	Seawater	MEYLDEMINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKKE
Ga0209336_100733134	3300025137	Marine	MEFFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKLANELVD
Ga0209634_11219192	3300025138	Marine	MEFLDEIINMRIKPSQKELLQEKANEEGLSISTYCRVKLTKDLEKEI
Ga0209304_10558522	3300025577	Pelagic Marine	MRIKPSDKEKLIAKANEDNLSVSAYCRVRLIKELKQK
Ga0209405_10109244	3300025620	Pelagic Marine	MEYLDEIINLRIRPSDKQKLTALALSYNLSVSAYCRSRLLNELEQSN
Ga0209405_11185763	3300025620	Pelagic Marine	MEFLDEIINMRLKPSDEEKLIQKAKEKHLSVSTYCRIKLLNEL
Ga0209716_10128774	3300025626	Pelagic Marine	MEYLDEIINMRIKPSDKEKLSALASSDNLSVSTYCRVQLTKELKQE
Ga0209716_10284333	3300025626	Pelagic Marine	MEYLDEYINVRLKPSDKERLIAKANEDNLSVSAYCRVRLIKELKKE
Ga0209716_10286001	3300025626	Pelagic Marine	TIVYIKNLDMEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRVKLTKELKQE
Ga0209198_10959314	3300025640	Pelagic Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKKE
Ga0209532_10065059	3300025696	Pelagic Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRAKLANELTN
Ga0209532_11083683	3300025696	Pelagic Marine	MEYLDEIINLRIKPSDKEKLIDKANEDNLSVSTYCRVQLTKELKQE
Ga0209307_10181958	3300025832	Pelagic Marine	YLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKKE
Ga0209603_10658112	3300025849	Pelagic Marine	MEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRVKLTKELKQE
Ga0209534_104453452	3300025880	Pelagic Marine	MEYLDEIINMRIKPSDKEKLIAKANEDNLSVSAYCRV
Ga0209534_104862652	3300025880	Pelagic Marine	MEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRSRLLN
Ga0209632_100732076	3300025886	Pelagic Marine	TQHMEYLDEIINLRIKPSDKQKLTALALSDNLSVSAYCRSRLLNELEQSN
Ga0209632_104739253	3300025886	Pelagic Marine	DEIINMRLKPSDEEKLIQKAKEKHLSVSTYCRIKLLNEL
Ga0209710_10496783	3300027687	Marine	MEFLDGIINMRLKPSDKEKLIQKAKEKHLSVSTYCRIKLLDEL
Ga0209710_11472861	3300027687	Marine	MGYLDEIINMRIKPSDKEKLTALASSDNLSVSKYCRVQLTKELKQE
Ga0209709_1000143323	3300027779	Marine	MEFLDGIINIRLKPSDKEKLIQKAKEKHLSISTYCRIKLLDEL
Ga0209091_103551761	3300027801	Marine	MGYLDEIINMRIKPSDKEKLTALASSDNLSVSKYCRVQL
Ga0209359_102727132	3300027830	Marine	MEFLDEIINMRVKPSDKEKLIQKAKEKHLSVSIYCRIKLVDEL
Ga0209712_105396872	3300027849	Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSAYCRSRLLNELE
Ga0308022_11285661	3300031142	Marine	MEFLDGIINIRLKPSDKEKLIQKAKEKHLSISTYCRVKLLDEL
Ga0308025_11361202	3300031143	Marine	MEYLDEIINMRLKPSDKEKLIQKAKEKHLSISTYCRVKLLDEL
Ga0308010_10132344	3300031510	Marine	MEFLDGIINIRLKPSDKEKLIQKAKEKHLSISTYCR
Ga0308019_100521162	3300031598	Marine	MEYLDEIINMRVKPSDKEKLIQKAKEKHLSISTYCRVKLLDEL
Ga0308007_101265122	3300031599	Marine	MEYMDEIINMRVKPSDKEKLIQKAKEKHLSVSTYCRIKLLDE
Ga0308004_100603403	3300031630	Marine	MEYMDEIINMRVKPSDKEKLIQKAKEKHLSVSTYCRIKLLNEL
Ga0308004_101046591	3300031630	Marine	MEYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVK
Ga0308004_101155081	3300031630	Marine	MEFLDGIINMRLKPSDKEKLIQKAKEKHLSISTYCRVKLLDEL
Ga0308004_102271101	3300031630	Marine	EYFDEYINVRLKPSQKEVLKQKANKENLSVSAYCRVKLANELTN
Ga0308004_103959462	3300031630	Marine	MEYLDEYINVRLKPSDKERLIAKANEDNLSVSAYCRVRLIKELKQE
Ga0307986_100310714	3300031659	Marine	MEYLDEYINVRLKPSDKERLIAKANEDNLSVSAYCRVRLIKELKK
Ga0307986_101149302	3300031659	Marine	MEYLDEIINMRIKPSDKEKLTALVSADNLSVSTYCRVQLTKELKQE
Ga0307986_102281472	3300031659	Marine	MEFLDEIINMRIAPSDKEKLTQKAKENKQSVSAYCRVKLVGELE
Ga0307998_10034077	3300031702	Marine	MEYLDEYINVRLKPSDKERLIAKANQENLYVSAYCRSRLLNEFEQSN
Ga0307998_10121665	3300031702	Marine	MEYLDEIINMRIKPSDKEKLTALASLDNLSVSTYCRVQLTKELKKE
Ga0307998_10155896	3300031702	Marine	MEFLDGIINMRLKPSDKEKLIQKAKEKHLSISTYCRVKLIDEL
Ga0307998_10414281	3300031702	Marine	MEYLDERIKPSDKEKLTALASSDNLSVSAYCRSRLLNELEYSN
Ga0307998_10480472	3300031702	Marine	MEYLDEIINMRIKPSQKEILKKKANKENLSVSAYCRVKLANELTN
Ga0307998_10583193	3300031702	Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKK
Ga0307998_10718043	3300031702	Marine	MRIKPLDKEKLIALASTDNLSVSKYYGVQLTKELKQ
Ga0307998_10799822	3300031702	Marine	MEYLDEIINMRIKPSDKEKLTALVSSDNLSVSTYCRVQLTKELKQE
Ga0307998_11129472	3300031702	Marine	MEYLDEIINMRIKPSDKQKLTALALSDNLSVSAYCRSRLLNELE
Ga0307998_11254362	3300031702	Marine	MEYLDEYINVRLKPSDKEKLIAEANEDNLSVSAYCRVRLIKELKKE
Ga0307998_11440783	3300031702	Marine	MEYLDEYINARLKPSDKEKLIAKANEDNLSVSAYCRVRLIKELKKE
Ga0307998_11826632	3300031702	Marine	MEYLDEIINMRIKPSDKEKLTALASSDNLSVSTYCRVQLTKELKQE
Ga0307998_12039012	3300031702	Marine	MEYLDEYINVRLKPSDKERLIAKANEDNLSVSAYCRVRLIKELKKK
Ga0307998_12621381	3300031702	Marine	MEFLDGIINIRLKPSDKEKLIQKAKEKHLSISTYCRIKLL
Ga0307998_12629293	3300031702	Marine	IINMRIKPSDKEKLTALASSDNLSVSAYCRSRLLNELE
Ga0307998_13016602	3300031702	Marine	TMEFLDGIINIRLKPSDKEKLIQKAKEKHLSISTYCRIKLLDEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters