Metagenome / Metatranscriptome Family F062106

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062106
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	77 residues
Representative Sequence	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVD
Number of Associated Samples	96
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.50 %
% of genes near scaffold ends (potentially truncated)	88.55 %
% of genes from short scaffolds (< 2000 bps)	81.68 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.779 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.824 % of family members)
Environment Ontology (ENVO)	Unclassified (62.595 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.908 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.58% β-sheet: 7.48% Coil/Unstructured: 57.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03734	YkuD	16.79
PF00216	Bac_DNA_binding	5.34
PF04392	ABC_sub_bind	3.05
PF13460	NAD_binding_10	2.29
PF17195	DUF5132	1.53
PF01527	HTH_Tnp_1	1.53
PF00072	Response_reg	0.76
PF00027	cNMP_binding	0.76
PF00126	HTH_1	0.76
PF01739	CheR	0.76
PF04140	ICMT	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	16.79
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	16.79
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	5.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.05
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.53
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.49 %
Unclassified	root	N/A	41.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	54.20 %
Unclassified	root	N/A	41.22 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.53 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.87 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	17.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.76 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.76 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.76 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
Mesorhizobium sp. LNHC220B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC220B00	0.76 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.76 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004267\|Ga0066396_10004850	Not Available	1423	Open in IMG/M
3300005167\|Ga0066672_10634701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300005332\|Ga0066388_100165987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2803	Open in IMG/M
3300005332\|Ga0066388_102601136	Not Available	922	Open in IMG/M
3300005406\|Ga0070703_10014980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2215	Open in IMG/M
3300005549\|Ga0070704_100652616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300005556\|Ga0066707_10851687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300006173\|Ga0070716_100437870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	950	Open in IMG/M
3300006173\|Ga0070716_101185600	Not Available	613	Open in IMG/M
3300006175\|Ga0070712_101623468	Not Available	566	Open in IMG/M
3300006579\|Ga0074054_12107111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300006844\|Ga0075428_101748043	Not Available	648	Open in IMG/M
3300006854\|Ga0075425_101684242	Not Available	714	Open in IMG/M
3300009012\|Ga0066710_103173780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300009100\|Ga0075418_11955144	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300010323\|Ga0134086_10336494	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	594	Open in IMG/M
3300010337\|Ga0134062_10365795	Not Available	698	Open in IMG/M
3300010359\|Ga0126376_10403613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1232	Open in IMG/M
3300010359\|Ga0126376_10479486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1145	Open in IMG/M
3300010360\|Ga0126372_10474552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1167	Open in IMG/M
3300010360\|Ga0126372_10933796	Not Available	873	Open in IMG/M
3300010376\|Ga0126381_100489167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1733	Open in IMG/M
3300010398\|Ga0126383_10951767	Not Available	946	Open in IMG/M
3300012198\|Ga0137364_10584373	Not Available	841	Open in IMG/M
3300012199\|Ga0137383_10158704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1656	Open in IMG/M
3300012205\|Ga0137362_11468023	Not Available	568	Open in IMG/M
3300012210\|Ga0137378_11383793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300012356\|Ga0137371_10478045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	963	Open in IMG/M
3300012359\|Ga0137385_11502723	Not Available	537	Open in IMG/M
3300012360\|Ga0137375_11381030	Not Available	526	Open in IMG/M
3300012361\|Ga0137360_11888763	Not Available	503	Open in IMG/M
3300012362\|Ga0137361_11036316	Not Available	741	Open in IMG/M
3300012948\|Ga0126375_10316408	Not Available	1091	Open in IMG/M
3300012971\|Ga0126369_10009667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	7347	Open in IMG/M
3300015359\|Ga0134085_10164199	Not Available	946	Open in IMG/M
3300016270\|Ga0182036_10074040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2231	Open in IMG/M
3300016270\|Ga0182036_11889570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300016270\|Ga0182036_11891061	Not Available	506	Open in IMG/M
3300016294\|Ga0182041_11653548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300016319\|Ga0182033_10087940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2248	Open in IMG/M
3300016319\|Ga0182033_10104912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2088	Open in IMG/M
3300016319\|Ga0182033_10680949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	899	Open in IMG/M
3300016357\|Ga0182032_10113130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1942	Open in IMG/M
3300016357\|Ga0182032_10640323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	888	Open in IMG/M
3300016357\|Ga0182032_10748742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300016357\|Ga0182032_11395125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300016357\|Ga0182032_11978135	Not Available	511	Open in IMG/M
3300016371\|Ga0182034_10612054	Not Available	920	Open in IMG/M
3300016371\|Ga0182034_10623532	Not Available	912	Open in IMG/M
3300016371\|Ga0182034_11120927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC220B00	683	Open in IMG/M
3300016404\|Ga0182037_10342602	Not Available	1215	Open in IMG/M
3300016404\|Ga0182037_11715113	Not Available	560	Open in IMG/M
3300016422\|Ga0182039_10723487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	879	Open in IMG/M
3300016422\|Ga0182039_11913275	Not Available	545	Open in IMG/M
3300018433\|Ga0066667_11958403	Not Available	537	Open in IMG/M
3300018468\|Ga0066662_10996544	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300021372\|Ga0213877_10049562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1208	Open in IMG/M
3300021560\|Ga0126371_12624759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300025915\|Ga0207693_10093059	All Organisms → cellular organisms → Bacteria → Proteobacteria	2362	Open in IMG/M
3300026317\|Ga0209154_1320254	Not Available	509	Open in IMG/M
3300026327\|Ga0209266_1295017	Not Available	510	Open in IMG/M
3300026361\|Ga0257176_1043294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300026490\|Ga0257153_1109803	Not Available	544	Open in IMG/M
3300027576\|Ga0209003_1041629	Not Available	804	Open in IMG/M
3300027671\|Ga0209588_1063795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1190	Open in IMG/M
3300031543\|Ga0318516_10389408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300031545\|Ga0318541_10050245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2138	Open in IMG/M
3300031564\|Ga0318573_10580339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300031640\|Ga0318555_10314701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300031679\|Ga0318561_10259280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948	Open in IMG/M
3300031713\|Ga0318496_10144310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1297	Open in IMG/M
3300031713\|Ga0318496_10489046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300031713\|Ga0318496_10779459	Not Available	527	Open in IMG/M
3300031719\|Ga0306917_10114523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1955	Open in IMG/M
3300031719\|Ga0306917_10213641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1465	Open in IMG/M
3300031719\|Ga0306917_10322196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1197	Open in IMG/M
3300031719\|Ga0306917_11370604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300031736\|Ga0318501_10522528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300031744\|Ga0306918_10071906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2378	Open in IMG/M
3300031748\|Ga0318492_10534589	Not Available	623	Open in IMG/M
3300031751\|Ga0318494_10166480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1247	Open in IMG/M
3300031764\|Ga0318535_10425666	Not Available	592	Open in IMG/M
3300031765\|Ga0318554_10463234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300031771\|Ga0318546_10896291	Not Available	624	Open in IMG/M
3300031778\|Ga0318498_10068831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1589	Open in IMG/M
3300031779\|Ga0318566_10213975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	957	Open in IMG/M
3300031781\|Ga0318547_10511997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300031797\|Ga0318550_10310076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300031805\|Ga0318497_10301862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	892	Open in IMG/M
3300031859\|Ga0318527_10378727	Not Available	603	Open in IMG/M
3300031860\|Ga0318495_10408202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031879\|Ga0306919_10095199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2083	Open in IMG/M
3300031879\|Ga0306919_10564036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300031879\|Ga0306919_11439578	Not Available	519	Open in IMG/M
3300031890\|Ga0306925_10280248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1794	Open in IMG/M
3300031890\|Ga0306925_11824750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031896\|Ga0318551_10809888	Not Available	545	Open in IMG/M
3300031910\|Ga0306923_10019329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7172	Open in IMG/M
3300031910\|Ga0306923_10548021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1304	Open in IMG/M
3300031942\|Ga0310916_11130676	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300031946\|Ga0310910_11561247	Not Available	505	Open in IMG/M
3300031954\|Ga0306926_11386283	Not Available	816	Open in IMG/M
3300031954\|Ga0306926_11855265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300032001\|Ga0306922_10174588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2303	Open in IMG/M
3300032001\|Ga0306922_10212460	Not Available	2076	Open in IMG/M
3300032001\|Ga0306922_10954283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300032035\|Ga0310911_10808806	Not Available	542	Open in IMG/M
3300032042\|Ga0318545_10117615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	936	Open in IMG/M
3300032044\|Ga0318558_10715955	Not Available	500	Open in IMG/M
3300032051\|Ga0318532_10140228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	858	Open in IMG/M
3300032052\|Ga0318506_10264097	Not Available	763	Open in IMG/M
3300032055\|Ga0318575_10044776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2006	Open in IMG/M
3300032059\|Ga0318533_11319152	Not Available	527	Open in IMG/M
3300032076\|Ga0306924_10225648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2151	Open in IMG/M
3300032076\|Ga0306924_10947803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948	Open in IMG/M
3300032094\|Ga0318540_10636344	Not Available	514	Open in IMG/M
3300032180\|Ga0307471_102004538	Not Available	726	Open in IMG/M
3300032261\|Ga0306920_100666549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1535	Open in IMG/M
3300032261\|Ga0306920_100986221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1227	Open in IMG/M
3300033289\|Ga0310914_10032149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4198	Open in IMG/M
3300033289\|Ga0310914_10443196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1175	Open in IMG/M
3300033290\|Ga0318519_10597300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300033290\|Ga0318519_10983006	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.71%
Host-Associated	Host-Associated	2.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.71%
Plants	Host-Associated → Plants	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.08%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.29%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1040213111	3300000955	Soil	MRLCAVCLTGLTPLSPVLAQSPVDQQSAGGVANIYNLDRDAHVGSVEIHGPIDRAVTSQ
Ga0066396_100048503	3300004267	Tropical Forest Soil	MRNFLRSVMVGAVCVMGMSLLSPLAAQWPVNQQAVEGSVNIYNLDRDARVGGIEVQGRIGKAVANDIVARRRVT*
Ga0066672_106347012	3300005167	Soil	MGLAHPSPLAAQLPVDQKPAAGIANIYNLDRDARVGSVEIYGQIDNAVASQAIKLIRSIRPDVDELTVFLSSRGGDVLAAIELGE
Ga0066388_1001659871	3300005332	Tropical Forest Soil	MRDFFRSVRLCAVCLMGLGFLSPLAAQSPVNQQAAEGTANIYNLDRDAHVGGVEIHGPITKA
Ga0066388_1026011363	3300005332	Tropical Forest Soil	MQTFCKIARWCCLIGLAQLSPLAAQSPVRQQAGESTANISYLDRRAGVAGVEIHGPINKAVATKAVELITSTRQDVDELTVSLDSPGGDVLAAIE
Ga0070703_100149801	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRDFLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVTSQAVQLIRSIRTDVDELTVFLSS
Ga0070704_1006526162	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRGFWRRMRLCAVCLMGLALLSRVAAQSPVDQQTAGGTANIYNLDRDAHVGSVEIQGPIDRALTS
Ga0066707_108516872	3300005556	Soil	MRDFLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVASQAVQLIKSIR
Ga0070716_1004378703	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRDFLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVASQAVQLIKSIRPDVDEL
Ga0070716_1011856002	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MANFFRSVRLCAVCLMGLALLSPLAAQSPVDQQAAEGTANIYNLDRDARVGGVEIHGPIGKAVASQAVKLIRSIRPDVDELTVFLS
Ga0070712_1016234681	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRGFWRRMRLCAVCLTGLTPLSPVLAQSPVDQQSAGGVANIYNLDRDAHVGSVEIHGPIDRAVTSQAIEL
Ga0074054_121071111	3300006579	Soil	MRDFLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVASQAVQLIKSIRP
Ga0075428_1017480431	3300006844	Populus Rhizosphere	MRNLLRSVMVWAVCVMGMALLSPLAAQVNQQAVEGSVNIYNLDRDARVGGIEIHGRIGKAVANEAVKLLS
Ga0075425_1016842421	3300006854	Populus Rhizosphere	MRGFWRRMRLCAVCLTGLTPLSPVLAQSPVDQQSAGGVANIYNLDRDAHVGSVEIHGPIDRAVTSQAIELIRSIRPDVDELTV
Ga0099794_100051937	3300007265	Vadose Zone Soil	MRDFFRSVRLCAACLVGLALLSPLAAQSPTDQQAAEGTVNIYNLDRDAHVGGVEIHGPI
Ga0066710_1031737801	3300009012	Grasslands Soil	MGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVASQAVQLIKSIRPDVDELTVFLSSPG
Ga0075418_119551441	3300009100	Populus Rhizosphere	MQKFCKIAMLCCLMGLAQLCPVAAQSPVDEQAGESTTNIYNLDRGARVGGVEIHGPINKAVATRAVELITSIRQDDDDLTVSLNSPG
Ga0134086_103364941	3300010323	Grasslands Soil	MPNFFRSMGLCAVWLMGLAHLSPLAAQLPVDKKPAAGIANIYNLDRDARVGSVEINGQIDNAVASQAIKL
Ga0134062_103657952	3300010337	Grasslands Soil	MPNFVRNVGLCAVWLMGLAHPSPLAAQLPVDQKPAAGIANIYNLDRDARVGSVEIYGQIDNAVASQAIKLIRSIRPDVDELTVFLSS
Ga0126376_104036131	3300010359	Tropical Forest Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEATVNIYNLDREAHVGGVEIHGPITKAVASQAMQLIRTIRPD
Ga0126376_104794861	3300010359	Tropical Forest Soil	MRDFFRSVRLGAAWLMGLALLSPLGAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGPITKAVASQAMQLIRTIRPD
Ga0126372_104745523	3300010360	Tropical Forest Soil	MNLGLGMRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKV
Ga0126372_109337961	3300010360	Tropical Forest Soil	MGLALLSPVAAQSPVDQQTAGGIANIYNLDRAAHVGGVEIQGPIDRALTSQAIELIRSIRRDVDELTVLLNSPGGDVLAA
Ga0126381_1004891673	3300010376	Tropical Forest Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQ
Ga0126383_109517671	3300010398	Tropical Forest Soil	MRDFLRSVSLFAACMMGSAALCPLAAQSPVDRQAAEGTVNIYNLDREARVGGVEIHGPIHKGMVGGSREADQVHPSRRG*
Ga0137364_105843732	3300012198	Vadose Zone Soil	MGLASLSPIGAQSPVEQQAMEGSANIYNLDRDARVGGIEIQGRIGKAVANEAAKLIRSIRPDVDELTVFLSSPGGDVVA
Ga0137383_101587041	3300012199	Vadose Zone Soil	MRDFLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTAKIYNLEPDAGIGGVEIHGPITKAVASQAVQLIKSIRPDVDELTVFLSSPGGDVLA
Ga0137362_114680231	3300012205	Vadose Zone Soil	MGLALLSPLAAQSPVDQPAAEGTANIYNLDREAGIGGVEIHGPIGKVVASQAVKLISFIRPDVDELTVSLNSPGGDVLAAIELGE
Ga0137378_113837931	3300012210	Vadose Zone Soil	MGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVASQAVQLIKSIRPDVDELTVFLSSP
Ga0137371_104780451	3300012356	Vadose Zone Soil	MGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVTSQAVQLIRSIRPDVDELTVFLSSPGGDVLAAME
Ga0137385_115027231	3300012359	Vadose Zone Soil	MRDFLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTANIYNLDRDAHVGSVESQGPFDRALTSQAIELIRSIRPDVD*
Ga0137375_113810301	3300012360	Vadose Zone Soil	MGLALLSPLGAQSPPDQRGADGSANIYNLDRDARVGGIEIQGRIGKAVANEAAKLIRSIRPDVDELTVFLSSPGGDVV
Ga0137360_118887631	3300012361	Vadose Zone Soil	MRNFFRSVRLCAVCLLGLAVLSPLAAQSPVDQQAAEGTANIYNLERDARVGGVEIHGPIGKAVANQAVKL
Ga0137361_110363162	3300012362	Vadose Zone Soil	MGLALLSPLAAQSPVDQEAAEGTANIYNLDRDARVGGVEIHGPIGKAVASQAVKLIRSIRPDVDELTVFLSSPGGDVLAAIEL
Ga0126375_103164081	3300012948	Tropical Forest Soil	MRNFLRSVMVGAVCVMGMSLLSPLAAQSPVNQQAVEGSVNIYNLDRDARVGGIEVQGRIGKAVANDIVARRRVT*
Ga0126369_100096674	3300012971	Tropical Forest Soil	MGLALLSPVAAQSQTDQQTAGIANIYNLDRVARVGGVEIQGPIDRALTSQAIELIRSIRPDVDELTVLLNSPGGDVLRRWSWARKSETNGL*
Ga0134085_101641992	3300015359	Grasslands Soil	MPNFVRNVGLCAVWLMGLAHLSPLAAQLPVDQKPAVGIANIYNLDRDARVGGVEINGQIDNAVASQAIKLIRSIRPDVD
Ga0182036_100740401	3300016270	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPG
Ga0182036_118895701	3300016270	Soil	MPNFFRSVRLWAVCLMGLATLLSPLAAQSPIDQQAAEGTANIYNLDRGAHVGGIEIQGRIGKAVAKRSSEADQVYP
Ga0182036_118910612	3300016270	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPG
Ga0182041_116535482	3300016294	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLIS
Ga0182033_100879401	3300016319	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDL
Ga0182033_101049124	3300016319	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKA
Ga0182033_106809493	3300016319	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLI
Ga0182032_101131303	3300016357	Soil	VCLIALALPSPVAAQSPVDQQTAGGTANIYNLDRDAHVGRVEIQGPIDRALTSQAIELIRSIRPDVDELTVLLNSPGGD
Ga0182032_106403233	3300016357	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQA
Ga0182032_107487421	3300016357	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVD
Ga0182032_113951251	3300016357	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQ
Ga0182032_119781352	3300016357	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQ
Ga0182034_106120541	3300016371	Soil	MACAVCVMGLASLFPLGAQSLEQQAMEGSANIYNLDRDARVGGIEIQGRIGKAVANEAAKLIRSIRPDVDGLTVFLSSP
Ga0182034_106235321	3300016371	Soil	MPNLFRSARLSAVCLMGLAHLSPLAAQSSVDQQGVGGVANIYNLDRDEHLGGVEIHGTIDAAVAHQAIELIRSIRPDVDELTVFLSSPGGDVLAA
Ga0182034_111209271	3300016371	Soil	MQSFLRSVKVGAVCAMGLALLSPLAAQPFVDQQAVEGTANIYNLDRDAHVGGIEIQGRIGKAVANEAAK
Ga0182037_103426021	3300016404	Soil	MRDFLRSLKLCAACLVGLALLSPLAAQSPADQHAAEGTVNIYNLDREAHVGGIEIHGPISKAVVSQA
Ga0182037_117151132	3300016404	Soil	MRDLLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPG
Ga0182039_107234871	3300016422	Soil	MRDFFRSVRFGAAWLMGLALVSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLI
Ga0182039_119132751	3300016422	Soil	MRDLLRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDL
Ga0066667_119584031	3300018433	Grasslands Soil	MPNFVRSVGLCAVWLMGLAHLSPLAAQLPVDQKPAVGIANIYNLDRDARVGGVEINGQIDNAVASQAIKLIRSIRP
Ga0066662_109965441	3300018468	Grasslands Soil	MPNFVRNVALCAVWLMGLAHPSPLAAQLPVDQKPAAGIANIYNLDRDARVGSVEIYGQIDNAVASQAIKLIRSIRPDVDELTVF
Ga0213877_100495621	3300021372	Bulk Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGPISKAVASQAMQLIRTIRPDVDDLKVLLSSP
Ga0126371_126247591	3300021560	Tropical Forest Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPD
Ga0207693_100930594	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRGFWRRMRLCAVCLTGLTPLSPVLAQSPVDQQSAGGVANIYNLDRDAHVGSVEIHGPIDRAVTSQAIELIRSIRPDVDELTVLLNSA
Ga0209154_13202542	3300026317	Soil	MPNFVRNVALCAVWLMGLAHPPPLAAQLPVDQKPAAGIANIYNLDRDARVGSVEIYGQIDNAVASQAIKLIRSIRPDVD
Ga0209266_12950172	3300026327	Soil	MPNFVRSVGLCAVWLMGLAHLSPLAAQLPVDQKPAAGIANIYNLDRDARVGSVEIYGQIDNAVASQAIKLIRS
Ga0257176_10432941	3300026361	Soil	MRDFFRSVRLCAACLVGLALLSPLAAQSPTDQQAAEGTVNIYNLDRDAHVGGVEIHGPISKAVVSQAVQLIRSIRPDVDDLKGFLS
Ga0257153_11098031	3300026490	Soil	MRGFWRRMRLCAVCLMGLALLSPVAAQSPVDQQTAGGIANIYNLSRDAHVGGVEIQGAIDRAVTSQAIELIRSIRPDV
Ga0209003_10416292	3300027576	Forest Soil	MSGINPGLYMRGFWRRMRLYAVCLMSLALLSHPVVAQSQTAGGVANIYNLDRDAHVGSVEIHGPIDRAVTSQAIELIRSIRPDVDELTVLLNSAGG
Ga0209588_10637951	3300027671	Vadose Zone Soil	MRDFFRSVRLCAACLVGLALLSPLAAQSPTDQQAAEGTVNIYNLDRDAHVGGVEIHGPISKAVVSQAV
Ga0318516_103894081	3300031543	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDL
Ga0318541_100502455	3300031545	Soil	MRNFFGSARLSAVCLMSLAHLSPLAAQSSVDQQGVGGVANIYNLDRDAHVGGVEIHGTIDTAVARQAIELIRSIRPDVDELTVFLSSP
Ga0318573_104463852	3300031564	Soil	MRNFFGSARLSAVCLMSLAHLSPLAAQSSVDQQGVGGVANIYNLDRDAHVGGVEIHGTIDTAVAHQAI
Ga0318573_105803391	3300031564	Soil	MRDLLRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDL
Ga0318555_103147011	3300031640	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRP
Ga0318561_102592801	3300031679	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKV
Ga0318574_101351931	3300031680	Soil	MPNFFRSARLSAVCLMGLAHLSPLAAQSSVDQQGAGGVANIYNLDRDEHLGGVEIHG
Ga0318496_101443103	3300031713	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVAS
Ga0318496_104890462	3300031713	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVL
Ga0318496_107794592	3300031713	Soil	MPNFFRSAKLSAVCLMGLAHLSPLAAQLSVDQQGAGGTANIYNLDRDAHVGGVEIHGTIDTAVARQAIELIRSIRPD
Ga0306917_101145231	3300031719	Soil	MPNFFRSARLSAVCLMGLAHLSPLAAQLSIDQQGAGGTANIYNLDRDAHVGGVEIHGTIDTAVARQAIELIRSIRPDVDELTV
Ga0306917_102136413	3300031719	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPGGDV
Ga0306917_103221961	3300031719	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGPITKAVASQAMQL
Ga0306917_113706042	3300031719	Soil	MRDFLRSVRLAAAWLMGLALLSPLAAQSPVEQPAAEGTANIYNLDRDAGIGGVEIHGPITKAVASQAVQLIKSIRP
Ga0318501_105225281	3300031736	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQL
Ga0306918_100719063	3300031744	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLK
Ga0318492_105345891	3300031748	Soil	MQSFLRSVRVGAVCAIGLALLSPLAAQPFVDQPAVEGSANVYNLDRDAHVGGIEIQGRIGKAVANEAAKLIRSIRPDVDE
Ga0318494_101664801	3300031751	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTI
Ga0318535_104256662	3300031764	Soil	MRNFLRSMGLCAVCLMGLALISPLAAQSPADQQAAEGTVNIYNLDRDAHVGGVEIHGLISKAVVSQAAQLIRSIRPDV
Ga0318554_104632341	3300031765	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGL
Ga0318546_108962911	3300031771	Soil	MQSFLRSVRVGAVCAMGLALLSPLAAQPFVDQPAVEGSANVYNLDRDAHVGGIEIQGRIGKAVANEAAKLIRSI
Ga0318498_100688311	3300031778	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLK
Ga0318566_102139751	3300031779	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDL
Ga0318547_105119971	3300031781	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVL
Ga0318550_103100761	3300031797	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQA
Ga0318497_103018621	3300031805	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQL
Ga0318527_103787271	3300031859	Soil	MQSFLRSVRVGAVCAMGLALLSPLAAQPFVDQPAVEGSANVYNLDRDAHVGGIEIQGRIGKAVA
Ga0318495_104082021	3300031860	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLS
Ga0306919_100951995	3300031879	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAV
Ga0306919_105640361	3300031879	Soil	MGLALLSPLAAQPFVDQQAVEGSANVYNLDRDAHVGGIEIRGRIGKAVANEAAKPIRSIRPDVDELTVFLSS
Ga0306919_114395781	3300031879	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLI
Ga0306925_102802481	3300031890	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAM
Ga0306925_118247501	3300031890	Soil	MPNFFRSVRLWAVCLMGLATLLSPLAAQSPIDQQAAEGTANIYNLDRGAHVGGIEIQGRIGKAVA
Ga0318551_108098882	3300031896	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPGGDVLAAMELGE
Ga0306923_1001642815	3300031910	Soil	MRNFFGSARLSAVCLMSLAHLSPLAAQSSVDQQGVGGVANIYNLDRDAHVGGVEIHGTIDTAV
Ga0306923_100193298	3300031910	Soil	MPNFFGSARLSAVCLMGLAHLSPLAAQSSADQQAAGGVANIYNLDRDAHVGGVEIHGTI
Ga0306923_105480213	3300031910	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLIS
Ga0310916_111306761	3300031942	Soil	VCLIALALPSPVAAQSPVDQQTAGGIANIYNLDREAHVGGVEIHGTTAVVSQAIELIRSIRPDVDELTVFLN
Ga0310913_105156463	3300031945	Soil	MPNFFRSAKLSAVCLMGLAHLSPLAAQLSVDQQGAGGTANIYNLDRDAHVGGVEIHGTID
Ga0310910_115612472	3300031946	Soil	VCLIALALPSPVAAQSPVDQQTAGGIANIYNLDREAHVGGVEIHGTTAVVSQAIELIRSIRPDVDELTVFLNS
Ga0306926_113862831	3300031954	Soil	MPNFFRSAKLSAVCLMGLAHLSPLAAQLSVDQQGAGGTANIYNLDRDAHVGGVEIHGTIDTAVARQAIELIRS
Ga0306926_118552651	3300031954	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPGG
Ga0318531_104821381	3300031981	Soil	MPNFFRSARLSAVCLMGLAHLSPLAAQSSVDQQGVGGVANIYNLDRDTHVGDVEIHGTIDTAV
Ga0306922_101745881	3300032001	Soil	MQKFLRSAMACAVCVMGLASLFPLGAQSLEQQAMEGSANIYNLDRDARVGGIEIQGRIGKAVANEAAKLIRSIRPD
Ga0306922_102124601	3300032001	Soil	MRNFFGSARLSAVCLMSLAHLSPLAAQSSVDQQGVGGVANIYNLDRDEHLGGVEIHGTIDTAVAHQAIELIRSIRPDVDEL
Ga0306922_109542831	3300032001	Soil	VPDGLGHPSLSPLAAQSPIDQQAAEGTANIYNLDRGAHVGGIEIQGRIGKAVANEAARLIRSIRPDVDELTVFLSSPGGDVLAAMERKS
Ga0310911_108088061	3300032035	Soil	MQSFLRSVKVGAVCAMGLALLSPLAAQPFVDQQAVEGTASIYNLDRDAHVGGIEIQGRIGKAVANEAAKLIRSIGS
Ga0318545_101176153	3300032042	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLK
Ga0318558_107159551	3300032044	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSS
Ga0318532_101402281	3300032051	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIR
Ga0318532_103468172	3300032051	Soil	MRNFFGSARLSAVCLMSLAHLSPLAAQSSVDQQGVGGVANIYNLDRDAHVGGVEIHGTID
Ga0318506_102640971	3300032052	Soil	MQSFLRSVRVGAVCAMGLALLSPLAAQPFVDQPAVEGSANVYNLDRDAHVGGIEIRGRIGKAVANEAAKLIRSIRPDVDELTLFLS
Ga0318575_100447761	3300032055	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTANIYNLDRGAHVGGIEIQGRIGKAVANEAARLIRSIR
Ga0318533_113191521	3300032059	Soil	MPNFFRSARLSAVCLMGLAHLSPLAAQSSVDQQGVGGVANIYNLDRDAHVGGVEIHGTIDTAVAHQAIELIRSIRPDVDELTVFLSSPGGDVL
Ga0306924_102256481	3300032076	Soil	VCLIALALPSPVAAQSPVDQQTAGGIANIYNLDREAHVGGVEIHGTTAVVSQAIELIRSIRPDVDELTVFLNSGGG
Ga0306924_109478033	3300032076	Soil	MRDFFRSVRLGAAWLMGLALLSPLAAQSPVDQPAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPGGDV
Ga0318540_106363441	3300032094	Soil	MRNFFGSARLSAVCLMSLAHLSPLAAQSSVDQQGVGGVANIYNLDRDAHVGGVEIHGTIDTAVAHQAIELIRSIRPDVDELTVFLSSPGG
Ga0307471_1020045382	3300032180	Hardwood Forest Soil	MRLWAVCLLGLALLSPVAAQSLVDQQTAGGIANIYNLNRAAHVGGVEIQGPIDKAVTSQAIELIR
Ga0306920_1006665491	3300032261	Soil	MPNFFGSARLSAVCLMGLAHLSPLAAQSSADQQAAGGVANIYNLDRDAHVGGVEIHGTIDSAVAHQAIELIRSIRPDVD
Ga0306920_1009862211	3300032261	Soil	MRDFFRSVRFGAAWLMGLALLSPLAAQSPADQQAAEGTVNIYNLDREAHVGGVEIHGLISKAVASQAMQLIRTIRPDVDDLKVLLSSPGG
Ga0310914_100321491	3300033289	Soil	VCLLGLALLSPLTAQSPVDQQVAEGTANIYNLYRDARVGGVEIHGSIGKAVASQAVKLIRSIRPDVDALTVFLSSPGGDVLAAIELG
Ga0310914_104431962	3300033289	Soil	VCLIALALPSPVAAQSPVDQQTAGGIANIYNLDREAHVGGVEIHGTTAVVSQAIELIRSIRPDVDELTVFLNSGGGDVLAAI
Ga0318519_105973002	3300033290	Soil	MPNFFRSVRLWAVCLMGLATLLSPLAAQSPIDQQAAEGTANIYNLDRGAHVGGIEIQGRIGKAVANE
Ga0318519_109830061	3300033290	Soil	MQGFLRNVRVGAVCAMGLALLSPLAAQPFVDQPAVEGSANVYNLDRDAHVGGIEIRGRIGKAVANEAAKLIRSIRPDVDELT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062106

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences