Metagenome Family F062096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062096
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	83 residues
Representative Sequence	KQRKSEMITFLKSYLEVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Number of Associated Samples	121
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.33 %
% of genes near scaffold ends (potentially truncated)	93.89 %
% of genes from short scaffolds (< 2000 bps)	93.13 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.473 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.160 % of family members)
Environment Ontology (ENVO)	Unclassified (38.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.328 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF07883	Cupin_2	0.76
PF03328	HpcH_HpaI	0.76
PF07690	MFS_1	0.76
PF04480	DUF559	0.76
PF01177	Asp_Glu_race	0.76
PF00296	Bac_luciferase	0.76
PF01717	Meth_synt_2	0.76
PF01797	Y1_Tnp	0.76
PF06348	DUF1059	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.76
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.76
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.76
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.76
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.76
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.38 %
Unclassified	root	N/A	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	48.09 %
Unclassified	root	N/A	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	48.09 %
Unclassified	root	N/A	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	48.09 %
Unclassified	root	N/A	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.09 %
Unclassified	root	N/A	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10108512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300000953\|JGI11615J12901_10187329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300000956\|JGI10216J12902_106595112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300004024\|Ga0055436_10192153	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300004145\|Ga0055489_10075330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300005288\|Ga0065714_10239337	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005331\|Ga0070670_102132107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300005332\|Ga0066388_102419033	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005347\|Ga0070668_100285020	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300005354\|Ga0070675_100244534	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1568	Open in IMG/M
3300005355\|Ga0070671_100012389	All Organisms → cellular organisms → Bacteria → Proteobacteria	6867	Open in IMG/M
3300005367\|Ga0070667_100397741	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300005441\|Ga0070700_101363891	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005457\|Ga0070662_100147226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1830	Open in IMG/M
3300005544\|Ga0070686_100171816	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300005546\|Ga0070696_100235644	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300005548\|Ga0070665_100974003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	861	Open in IMG/M
3300005549\|Ga0070704_102038507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005558\|Ga0066698_10197224	All Organisms → cellular organisms → Bacteria → Proteobacteria	1376	Open in IMG/M
3300005564\|Ga0070664_102166188	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005834\|Ga0068851_10852699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300005841\|Ga0068863_101193702	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300006173\|Ga0070716_100910958	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006846\|Ga0075430_100680394	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300006847\|Ga0075431_101957199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300006852\|Ga0075433_10348439	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300006852\|Ga0075433_10384685	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300006852\|Ga0075433_10920132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	763	Open in IMG/M
3300006871\|Ga0075434_100711406	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006914\|Ga0075436_100043114	All Organisms → cellular organisms → Bacteria	3110	Open in IMG/M
3300006969\|Ga0075419_10280925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300007076\|Ga0075435_100229271	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300009100\|Ga0075418_12519377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300009146\|Ga0105091_10361517	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300009147\|Ga0114129_12320446	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300009148\|Ga0105243_10682548	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300009157\|Ga0105092_10130745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1388	Open in IMG/M
3300009162\|Ga0075423_11098297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	847	Open in IMG/M
3300009176\|Ga0105242_12915664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300009545\|Ga0105237_10302807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1602	Open in IMG/M
3300009792\|Ga0126374_10611476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300010358\|Ga0126370_11707835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300010359\|Ga0126376_10955288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	853	Open in IMG/M
3300010360\|Ga0126372_11447317	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300010360\|Ga0126372_12407633	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010361\|Ga0126378_11361062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300010399\|Ga0134127_10073354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2913	Open in IMG/M
3300010399\|Ga0134127_10600030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1129	Open in IMG/M
3300010400\|Ga0134122_13382012	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300011428\|Ga0137456_1036266	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300011434\|Ga0137464_1101574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	847	Open in IMG/M
3300011435\|Ga0137426_1069556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	953	Open in IMG/M
3300011437\|Ga0137429_1045727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1275	Open in IMG/M
3300011444\|Ga0137463_1061466	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300011445\|Ga0137427_10106899	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300012199\|Ga0137383_10708765	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300012349\|Ga0137387_10072518	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300012359\|Ga0137385_10402649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1167	Open in IMG/M
3300012361\|Ga0137360_10059983	All Organisms → cellular organisms → Bacteria	2776	Open in IMG/M
3300012487\|Ga0157321_1010315	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012517\|Ga0157354_1094374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300012582\|Ga0137358_10286841	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300012914\|Ga0157297_10230838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300012922\|Ga0137394_11239466	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012923\|Ga0137359_11707766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300012960\|Ga0164301_10752945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300012960\|Ga0164301_11346468	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300013297\|Ga0157378_12817846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300013308\|Ga0157375_12044186	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300014272\|Ga0075327_1193369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300014317\|Ga0075343_1057214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	802	Open in IMG/M
3300014320\|Ga0075342_1062854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300015077\|Ga0173483_10260458	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300015261\|Ga0182006_1194702	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300015373\|Ga0132257_103013766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300015374\|Ga0132255_105541315	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300016422\|Ga0182039_10719902	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300016445\|Ga0182038_11997620	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300017792\|Ga0163161_11338666	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300017939\|Ga0187775_10188945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	758	Open in IMG/M
3300017997\|Ga0184610_1067020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1090	Open in IMG/M
3300018071\|Ga0184618_10457078	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300018072\|Ga0184635_10146645	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300018074\|Ga0184640_10313313	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300018081\|Ga0184625_10621462	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300018084\|Ga0184629_10629287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300018089\|Ga0187774_10777536	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300018482\|Ga0066669_10247269	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300019356\|Ga0173481_10030376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1728	Open in IMG/M
3300019361\|Ga0173482_10536444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300025312\|Ga0209321_10334361	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300025318\|Ga0209519_10161251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1326	Open in IMG/M
3300025904\|Ga0207647_10139199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1423	Open in IMG/M
3300025914\|Ga0207671_10484867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	985	Open in IMG/M
3300025916\|Ga0207663_11227828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300025926\|Ga0207659_10200134	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300025930\|Ga0207701_10045390	All Organisms → cellular organisms → Bacteria	4066	Open in IMG/M
3300025933\|Ga0207706_10889491	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300025936\|Ga0207670_10989129	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300025936\|Ga0207670_11931452	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300025945\|Ga0207679_10058367	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300025959\|Ga0210116_1058020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	745	Open in IMG/M
3300025959\|Ga0210116_1063096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300025960\|Ga0207651_10367797	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300025972\|Ga0207668_10578974	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300025972\|Ga0207668_11501243	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300025986\|Ga0207658_12055756	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026035\|Ga0207703_12329046	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300026075\|Ga0207708_11198286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300026116\|Ga0207674_10299535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1557	Open in IMG/M
3300026329\|Ga0209375_1217556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300027573\|Ga0208454_1167457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300028802\|Ga0307503_10264566	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031573\|Ga0310915_10595498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	784	Open in IMG/M
3300031720\|Ga0307469_10762250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300031744\|Ga0306918_11201699	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300031854\|Ga0310904_10767468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300031947\|Ga0310909_10681826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300031965\|Ga0326597_11186358	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300032001\|Ga0306922_11642921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300032003\|Ga0310897_10597933	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300032075\|Ga0310890_11506620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300032157\|Ga0315912_11628814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300032180\|Ga0307471_101262947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300032180\|Ga0307471_101777459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300032205\|Ga0307472_100433239	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032205\|Ga0307472_101776938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300033289\|Ga0310914_11684198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300033413\|Ga0316603_12092857	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.41%
Host-Associated	Host-Associated	33.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.91%
Plants	Host-Associated → Plants	33.59%
Aquatic	Environmental → Aquatic	14.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.95%
Sediment	Environmental → Aquatic → Sediment	9.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.63%
Marine	Environmental → Aquatic → Marine	3.05%
Freshwater	Environmental → Aquatic → Freshwater	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.92%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.58%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.05%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.87%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.82%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.29%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101085123	3300000793	Forest Soil	EMIPFLKEYLEVPEDEAAKSYDFLLSHMPDNMIVDDAVIRKAMEFAAYALKLKADAVPDISKVRDWSYAXAAK*
JGI11615J12901_101873292	3300000953	Soil	ELVVALLRGMAGGVRDVKQRKSEMIPFLKSYLDVPEDEANKSYEFLVSHMPDNMIVDDAVIKQAMEFAGSALRLKADAVPDISKVRDWSYARDATAK*
JGI10216J12902_1065951121	3300000956	Soil	QRRSDMIPFLKEYLEVPEDEATKSYEFLLSHMPDNMMVDDAVIRKAMEFAASALKLKPDAVPDISKVRDWSYARAAK*
Ga0055436_101921531	3300004024	Natural And Restored Wetlands	KAEMVTFLKSYIEVPEDEAAKSYEFLASHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0055489_100753301	3300004145	Natural And Restored Wetlands	LVLAFLRGAAGGVRDVKQRKSEMIRFVKEYLKLPEEQAVSSYEFLVSNMTDNMETDDATIKKAMEFAGHALKLKPNAMPDISKVRDWSYVRAALK*
Ga0065714_102393371	3300005288	Miscanthus Rhizosphere	KQRKSEMITFLKSYLEVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070670_1021321072	3300005331	Switchgrass Rhizosphere	LAVLRGLAGGVRDVKQRKSEMITFLKSYLEVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0066388_1024190331	3300005332	Tropical Forest Soil	MIPFLKSYLDVPEDEATRSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070668_1002850202	3300005347	Switchgrass Rhizosphere	EMIPFLKSYLDLPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070675_1002445343	3300005354	Miscanthus Rhizosphere	GVRDVKQRKSEMIPFLKSYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070671_1000123897	3300005355	Switchgrass Rhizosphere	VLRGLAGGVRDVKQRKSEMIPFLKSYLDLPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070667_1003977412	3300005367	Switchgrass Rhizosphere	SEMIPFLKSYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070700_1013638911	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKIRDWSYARAATK*
Ga0070662_1001472261	3300005457	Corn Rhizosphere	RELVLAVLRGLAGGVRDVKQRKSEMIPFLKSYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070686_1001718161	3300005544	Switchgrass Rhizosphere	PFLKSYLDLPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070696_1002356442	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070665_1009740032	3300005548	Switchgrass Rhizosphere	LAVLRGLAGGVRDVKQRKSEMIPFLKSYLDLPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070704_1020385072	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GLAGGVRDVKQRKSEMINFLKSYLEVREDEAAKSYEFLISHMPDNSIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATKSLGAKSGR
Ga0066698_101972241	3300005558	Soil	LKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATKSLGAK*
Ga0070664_1021661881	3300005564	Corn Rhizosphere	KSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0068851_108526992	3300005834	Corn Rhizosphere	ANRELVLAVLRGLAGGVRDVKQRKSEMIPFLKSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0068863_1011937022	3300005841	Switchgrass Rhizosphere	KQRKPEMVTFLKSYLDVPEDEAAKSYDFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0070716_1009109581	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EMIPFLKEYLEVPEDEAVKSYDFLLSHMPDNMIVDDVVIRQAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK*
Ga0075430_1006803941	3300006846	Populus Rhizosphere	EVIPFLKSYLDVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATPK*
Ga0075431_1019571991	3300006847	Populus Rhizosphere	AVLRGVGAGIRDVKQRKSEMIAFLKSYLEVPEDEAAKSYEFLIGHMPDNMIVDDAVIRQAMEFAASSLKLKPDAVPDISKVRDWSYARAAAKRLDAK*
Ga0075433_103484392	3300006852	Populus Rhizosphere	EVPEDEAVKSYEFLLSHMPDNMIVDDVVIRKAMEFAAYSLKLKPDAVPDISKVRDWSYARAAK*
Ga0075433_103846852	3300006852	Populus Rhizosphere	MPEDEAAKSHEFLLSHMPDNMIVDDAVIRSAMEFAASAVKLKPDAVPDISKVRDWSYARAVK*
Ga0075433_109201321	3300006852	Populus Rhizosphere	GGVRDVKQRKSEMIPFLKSYLDVPEDEATKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0075434_1007114061	3300006871	Populus Rhizosphere	TFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0075436_1000431144	3300006914	Populus Rhizosphere	DVKQRKSEMIPFLKSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0075419_102809251	3300006969	Populus Rhizosphere	YFTANRDLVLAVLRGMAGGARDVKERKPEMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0075435_1002292712	3300007076	Populus Rhizosphere	MIGFLKAYLEVPEDEAAKSYEFLVSHMPDNMIVDDAVIRQAMEFAAFALKLKPDAVPDISKVRDWSYARAATAK*
Ga0075418_125193771	3300009100	Populus Rhizosphere	DYFAANRDLVLAVLRGMAGGVRDVKQRKSEMITFLKSYLDVPEDEAAKSYEFLLSHMPDNMIVDDAVIRSAMEFAASALKLKHDAMPDISKVRDWSYARAATK*
Ga0105091_103615172	3300009146	Freshwater Sediment	PFAKDYLKIPEEEAVKSYEFLAANMSDNLETDDPTILKAMQFAGNALKLKPEATPDIAKVRDWSFARAALK*
Ga0114129_123204461	3300009147	Populus Rhizosphere	KPEMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0105243_106825481	3300009148	Miscanthus Rhizosphere	RDVKERKSEMVTFLKGYLEVPEDEAAKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATR*
Ga0105092_101307453	3300009157	Freshwater Sediment	IPFAKDYLKIPEEEAVKSYEFLVANMSDNLETDDATILKAMQFAGNALKLKPEAIPDIAKVRDWSFARALK*
Ga0075423_110982971	3300009162	Populus Rhizosphere	AGVLDVKQRKSEVIPFLKSYLDVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATPK*
Ga0105242_129156642	3300009176	Miscanthus Rhizosphere	RGMAGGVRDIKQRKSEMITFLKSYLEVPEDEAAKSYEFLISHMPDNSIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATKSLGAK*
Ga0105237_103028073	3300009545	Corn Rhizosphere	GGVRDVKQRKSEMIPFLKSYLDVREDEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0126374_106114761	3300009792	Tropical Forest Soil	DLTLALLRGVAGGVRDVKQRRSEMIPFLKEYLQVPEDEAAKSYEFLLSHMPDNMIVDDAVIRKAMEFATYALKLKPDAVPDISRVRDWSYARAAK*
Ga0126370_117078351	3300010358	Tropical Forest Soil	MAGGSRDVKERKSEMITFLKGYLEVPEDEAAKSYEFLVSHMPDNMIVDDPVMKQAMEFAASALKLKPDAVPDISKVRDWSYARAATR*
Ga0126376_109552881	3300010359	Tropical Forest Soil	LLRGVAGGVRDVKQRRSEMIPFLKEYLQVPEDEAAKSYEFLLSHMPDNMIVDDAVIRKAMEFATYALKLKPDAVPDISRVRDWSYARAAK*
Ga0126372_114473172	3300010360	Tropical Forest Soil	AANRDLVLALLRGVAGGVRDVRQRRSEMIPFLKEYLEVPEDEAAKSYEFLLSHMPDNLTVDDAVIRQAMEFAAYALKLKPDAVPDISKVRDWSYARAAK*
Ga0126372_124076331	3300010360	Tropical Forest Soil	EVPEDEAAKSYEFLLSHMPDNMIVDDAVIRKAMEFATYALKLKPDAVPDISRVRDWSYARAAK*
Ga0126378_113610622	3300010361	Tropical Forest Soil	VLAVLRGMAGGARDVKERKSEMITFLKGYLEIPEDEAAKSYEFLVSHMPDNMIVDDPVMKQAMEFAASALKLKPDAVPDISKVRDWSYARAATR*
Ga0134127_100733541	3300010399	Terrestrial Soil	FVANRELVLAVLRGLAGGVRDVKQRKSEMIPFLKSYLDLPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0134127_106000301	3300010399	Terrestrial Soil	VLRGMAGGARDVKERNSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0134122_133820121	3300010400	Terrestrial Soil	KERKSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0137456_10362662	3300011428	Soil	KSEMITFLKSYLEVPEDEAAKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARASTK*
Ga0137464_11015742	3300011434	Soil	LHQGKKKTPGTFFCPANRDLVLAVLCGIAAGIRDVKQRKPEMVTFLKTYLDVPEDETLKSYEFLVSHMPDNMIVDDAVIKQGMEFAASALKLKPDAVPD
Ga0137426_10695562	3300011435	Soil	LHQGKKKTPGTFFCPANRDLVLAVLCGIAAGIRDVKQRKPEMVTFLKTYLDVPEDEALKSYEFLINHMPDNMIVDDAVIKQAMEFAATSLKLKPDAVPDISKVRDWSYARAATR*
Ga0137429_10457272	3300011437	Soil	LHQGKKKTPGTFFCPANRDLVLAVLCGIAAGIRDVKQRKPEMVTFLKTYLDVPEDEALKSYEFLINHMPDNMIVDDAVIKQAMEFAATSLKLKPDAV
Ga0137463_10614661	3300011444	Soil	NRDLVLAVLRGMAGGARDVKERKSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0137427_101068991	3300011445	Soil	QRKSEMVPFLKSYLEVPEDEAAKSYEFLVSHMPDNMIVDDAVISQAMEFAASSLKLKPDAVPDISKVRDWSYARAATR*
Ga0137383_107087651	3300012199	Vadose Zone Soil	FLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATR*
Ga0137387_100725181	3300012349	Vadose Zone Soil	RDLVLAVLRGMAGGVRDVKQRKSEMITFLKSYLEVPEDEAVKSYEFLVGHMPDNMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0137385_104026492	3300012359	Vadose Zone Soil	DYFAANRDLVLAVLRGMAGGVRDVKQRKSEMITLLKSYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATKWLGAK*
Ga0137360_100599834	3300012361	Vadose Zone Soil	LVLAILRGVAGGVRDVKQRRSEMIPFLKEYLEVPEDEAVKSYDFLLSHMPDNMIVDDVVIRQAMEFAAYSLKLKPDAVPDISNARDWSFARAAS*
Ga0157321_10103151	3300012487	Arabidopsis Rhizosphere	DMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDSVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0157354_10943743	3300012517	Unplanted Soil	GARDVKERKSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0137358_102868413	3300012582	Vadose Zone Soil	TFLKGYLEVPEDEAAKSYEFLVSHMPDNMIVDDAVIKSTMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0157297_102308381	3300012914	Soil	VPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0137394_112394661	3300012922	Vadose Zone Soil	RKSEMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK*
Ga0137359_117077661	3300012923	Vadose Zone Soil	MIPFLKEYLEVPEDEAVKSYDFLLSHMPDNMIVDDVVIRQAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK*
Ga0164301_107529451	3300012960	Soil	GVREVKQRRAEMIPFLKSYLDVPEDEATKSYEFLVAHMPDNMIVDDAVIKSAMEFAAAALKLKPDAIPDISKVRDWQYARAATAK*
Ga0164301_113464682	3300012960	Soil	EVPEDEAVKSYEFLVSHMPENMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATQSLGAK*
Ga0157378_128178462	3300013297	Miscanthus Rhizosphere	VLAVLRGMAGGARDVKERKSDMITFLKSYLEVPEDEAAKSYEFLISHMPDNSIADDGVIRSAMEFAASALKLKPEAVTDISKVRDWSYARAATKSLGAK*
Ga0157375_120441862	3300013308	Miscanthus Rhizosphere	KSEMITFLKSYLEVPEDEAAKSYEFLISHMPDNSIADDGVIRSAMEFAASALKLKPEAVPDISKVRDWSYARAATKSLGAK*
Ga0075327_11933691	3300014272	Natural And Restored Wetlands	GVAASTDFLANNRALVLAFLRGVAGGVRDVKQRKSEMIPFVKEYLKLPEEEAVKSYEFLVANMSDNLETDDATILKAMQFAGHALKLKPEAMPDIAKVRDWSYARAALK*
Ga0075343_10572142	3300014317	Natural And Restored Wetlands	STDFLAGNRALVLAFLRGVAGGVRDVKQRKSEMIPFVKEYLKLPEEEAVKSYEFLVANMTDNLETDDATILKAMQFAGHALKLKPEAMPDIAKVRDWSYARAALK*
Ga0075342_10628542	3300014320	Natural And Restored Wetlands	GGVRDVKQRKSEMIPFLKEYLKLPEEEAVKSYEFLVANMTDNLETDDATILKAMQFAGHALKLKPEAMPDIAKVRDWSYARAALK*
Ga0173483_102604581	3300015077	Soil	KSEMITFLKGYLEVPEDEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0182006_11947022	3300015261	Rhizosphere	VIPFLKSYLDVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATPK*
Ga0132257_1030137662	3300015373	Arabidopsis Rhizosphere	VLRGMAGGVRDVKQRKSEMIPFLKSYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK*
Ga0132255_1055413152	3300015374	Arabidopsis Rhizosphere	SEMIPFLKSYLDVPEDEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYASAATAK*
Ga0182036_109913091	3300016270	Soil	EDEATKSYDFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSYARGAK
Ga0182039_107199021	3300016422	Soil	LEVPEDEAAKSYEFLVSHMPDNMIVDDPVMKQAMEFAASALKLKPDAVPDISKVRDWSYARAATR
Ga0182038_119976202	3300016445	Soil	LKEYLEVPEDEAIKSYDFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSYARGAK
Ga0163161_113386662	3300017792	Switchgrass Rhizosphere	KSYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0187775_101889452	3300017939	Tropical Peatland	VRDVKQKKSEMIPFLKSYLDVPEDEATKSYEFLVNHMPDNMIVDDAVIKSAMEFAASALKLKPDGVPDISKVRDWSYARAATK
Ga0184610_10670201	3300017997	Groundwater Sediment	QPKSEMITFLKSYLEVPEDEAAKSYEFLISHMPDNMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATKSLGAK
Ga0184618_104570781	3300018071	Groundwater Sediment	LEVPEDEAVKSYEFLVSHMPDNMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYTRAATKSLGAK
Ga0184635_101466452	3300018072	Groundwater Sediment	LKEYLEVPEDEATKSYEFLLSHMPDNMIVDDVVIRKAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK
Ga0184640_103133132	3300018074	Groundwater Sediment	EMIPFLKEYLEVPEDEATKSYEFLLSHMPDNMIVDDVVIRKAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK
Ga0184625_106214621	3300018081	Groundwater Sediment	QRRSEMIPFLKEYLEVPEDEAVKSYEFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK
Ga0184629_106292872	3300018084	Groundwater Sediment	LEVPEDEAAKSYEFLLSHMPDNMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATKSLGAK
Ga0187774_107775362	3300018089	Tropical Peatland	FLKSYLDVPEDEAIKSYEFLVNHMPDNMIVDDAVIKSAMEFAASALKLKPDGVPDISKVRDWSYARAATK
Ga0066669_102472693	3300018482	Grasslands Soil	AVLRGMAGGARDVKERKSEMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATR
Ga0173481_100303761	3300019356	Soil	KQRKSEMITFLKGYLEVPEDEATKSYEFLVSHMPDNMIVDDAVIRQAMELAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0173482_105364442	3300019361	Soil	VLRGLAGGVRDVKQRKSEMIPFLKSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0209321_103343612	3300025312	Soil	EMITFLKSYLDVPEDEAAKSYEFLVSHMPDNMIVDDAVIKSGMEFAASALKLKPDAVPDISKIRDWSYARAAAK
Ga0209519_101612512	3300025318	Soil	DLAVALLRGMAGGVRDVKQRKSEMITFLKSYLDVPEDEAAKSYEFLVSHMPDNMIVDDAVIKSGMEFAASALKLKPDAVPDISKIRDWSYARAAAK
Ga0207647_101391994	3300025904	Corn Rhizosphere	LKSYLEVPEDEASKSYEFLVSHMPDNMIVDDAVIKQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207671_104848671	3300025914	Corn Rhizosphere	GGVRDVKQRKSEMIPFLKSYLDVREDEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207663_112278282	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VKERKSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATQSLGVK
Ga0207659_102001341	3300025926	Miscanthus Rhizosphere	GVRDVKQRKSEMIPFLKSYLDVPEDEATKSYEFLLSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207701_100453905	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDSVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK
Ga0207706_108894911	3300025933	Corn Rhizosphere	MITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK
Ga0207670_109891292	3300025936	Switchgrass Rhizosphere	RKSEMINFLKSYLEVREDEAAKSYEFLISHMPDNSIVDDAVIRSAMEFAASALKLKPDAVPDISKVRDWSYARAATKSLGAK
Ga0207670_119314522	3300025936	Switchgrass Rhizosphere	IPFLKSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207679_100583671	3300025945	Corn Rhizosphere	KSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0210116_10580201	3300025959	Natural And Restored Wetlands	LVLAFLRGAAGGVRDVKQRKSEMIRFVKEYLKLPEEQAVSSYEFLVSNMTDNMETDDATIKKAMEFAGHALKLKPNAMPDISKVRDWSYVRAALK
Ga0210116_10630962	3300025959	Natural And Restored Wetlands	RDVKQRKSEMIPFVKEYLKLPEEEAVKSYEFLVANMSDNLETDDATILKAMQFAGHALKLKPEAMPDIAKVRDWSYARAALK
Ga0207651_103677972	3300025960	Switchgrass Rhizosphere	SYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207668_105789741	3300025972	Switchgrass Rhizosphere	DVKQRKSEMIPFLKSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207668_115012431	3300025972	Switchgrass Rhizosphere	DVKERKSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDSVIKSTMEFAASALKLKPDAVPDISKVRDWSYARAATK
Ga0207658_120557561	3300025986	Switchgrass Rhizosphere	FLKSYLDVPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207703_123290462	3300026035	Switchgrass Rhizosphere	LKSYLDLPEEEATKSYEFLVSHMPDNMIVDDAVIRQAMEFAASALKLKPDAVPDISKVRDWSYARAATAK
Ga0207708_111982861	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAGGVRDIKQRKSEMITFLKSYLEVPEDEAAKSYEFLISHMPDNSIADDGVIRSAMEFAASALKLKPEAVPDISKVHHFICRAIDLLMVPVYC
Ga0207674_102995354	3300026116	Corn Rhizosphere	GGVRDAKQRKPEMVTFLKSYLDVPEDEAAKSYDFLVSHMPDNMIVDDAVIRQGMEFAAASLKLKPDAVPDISKVRDWSYARAATKLPGTP
Ga0209375_12175562	3300026329	Soil	AVLRGMAGGVRDVKQRKSEMITFLKSYLEVPEDEAAKSYEFLMSHMPDNMIVDDAVIRSAMEFAASSLKLKPDAVPDISKVRDWSYARAATKSLGAK
Ga0208454_11674571	3300027573	Soil	YFAANRNLVLAVLRGIAAGIRDVKLRKPEMVTFLKTYLDVPEDETLKSYEFLVSHMPDNMIVDDAVIKQGMEFAASALKLKPDAVPDISKVRDWSYARAATI
Ga0307503_102645661	3300028802	Soil	EMITFLKSYLEVPEDEAAKSYEFLVSHMPDNMIVDDAVIRTAMEFAASSLKLKPDAVPDISNVRDWSYARAATKSLAAK
Ga0310915_105954982	3300031573	Soil	DYFANNRDLVLAVLRGVAGGVRDVKQRRSEMIPFLKEYLEVPEDEATKSYDFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSYARGAK
Ga0307469_107622501	3300031720	Hardwood Forest Soil	PDYFAANRDLVLAVLRGMAGGARDVKERKSDMITFLKGYLEVPEDEAVKSYEFLVSHMPDNMIVDDSVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATK
Ga0306918_112016991	3300031744	Soil	LKGYLEVPEDEAAKSYEFLVSHMPDNMIVDDPVMKQAMEFAASALKLKPDAVPDISKVRDWSYARAATR
Ga0307473_109550102	3300031820	Hardwood Forest Soil	EDEAVKSYDFLLSHMPDNMIVDDIVIRQAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK
Ga0310904_107674681	3300031854	Soil	SPDYFANNRDLVLALLRGVAGGVRDVKQRRTEMIPFLKEYLDVPEDEAIKSYEFLLSHMPDNMIVDDVVIRKAMEFAASALKLKPDAVPDISKVRDWSFARAAK
Ga0310909_106818261	3300031947	Soil	FANNRDLVLAVLRGVAGGVRDVKQRRSEMIPFLKEYLEVPEDEATKSYDFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSYARGAK
Ga0326597_111863581	3300031965	Soil	QRKAEMVTFLKSYIEVPEDEAAKSYQFLASHMPDNMIVDDAVIKSAMEFAASALKLKPDAVPDISKVRDWSYARAATR
Ga0306922_116429212	3300032001	Soil	RDLVLAVLRGVAGGVRDVKQRRSEMISFFKEYLEVPEDEATKSYDFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSYARGAK
Ga0310897_105979331	3300032003	Soil	DVPEDEAIKSYEFLLSHMPDNMIVDDVVIRKAMEFAASALKLKPDAVPDISKVRDWSFARAAK
Ga0310890_115066202	3300032075	Soil	PDYFAANRDLVLALLRGMAGGVRDIKQRKSEMITFLKSYLEVPEDEAAKSYEFLISHMPDNSIADDGVIRSAMEFAASALKLKPEAVPDISKVRDWSYARAATKSLGAK
Ga0315912_116288142	3300032157	Soil	LAVLRAIAGGVRDAKQRKSEMIPFLKSYLDVPEDEAAKSYEFLVSHMPDNMIVDDAVIKKGMEFAASALKLKPDAVPDIAKVRDWSYARAATK
Ga0307471_1012629471	3300032180	Hardwood Forest Soil	LAILRGVAGGVRDVKQRRSEMIPFLKEYLEVPEDEAVKSYDFLLSHMPDNMIVDDVVIRQAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK
Ga0307471_1017774591	3300032180	Hardwood Forest Soil	RDLVLAVLRGVAGGVRDVKQRRSEMIPFLKEYLEVPEDEAAKSYEFLLSHMPDNMTVDDAVIRKAMEFAASALKLKPDAVPDISKVRDWSYARAAK
Ga0307472_1004332392	3300032205	Hardwood Forest Soil	KEYLEVPEDEAVKSYEFLLSHMPDNMIVDDVVIKQAMEFAAYSLKLKPDAVPDISKVRDWSFARAAK
Ga0307472_1017769382	3300032205	Hardwood Forest Soil	DLVLAVLRGVAGGVRDVKQRRSEMIPFLKEYLEVPEDEAAKSYEFLLSHMPDNMTVDDAVIRKAMEFAASALKLKPDAVPDISKVRDWSYARAAK
Ga0310914_116841982	3300033289	Soil	MIPFLKEYLEVPEDEATKSYDFLLSHMPDNMIVDDAVIRQAMEFAAYSLKLKPDAVPDISKVRDWSYARGAK
Ga0316603_120928572	3300033413	Soil	DLVLAVLRGVAGGVRDAKQRKSEMITFLKSYLDVPEDEAARSYEFLVSHMPDNMIVDDAVIKQGMEFAASALKLKPDAVPDISKVRDWSYARAATK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences