Metagenome Family F062091

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062091
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	86 residues
Representative Sequence	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPQGRRRT
Number of Associated Samples	94
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.97 %
% of genes near scaffold ends (potentially truncated)	18.32 %
% of genes from short scaffolds (< 2000 bps)	69.47 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.603 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (16.030 % of family members)
Environment Ontology (ENVO)	Unclassified (65.649 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.756 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.29% β-sheet: 0.00% Coil/Unstructured: 40.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01807	zf-CHC2	25.19
PF08281	Sigma70_r4_2	15.27
PF13155	Toprim_2	6.87
PF08275	Toprim_N	6.11
PF06906	DUF1272	2.29
PF13419	HAD_2	2.29
PF04546	Sigma70_ner	1.53
PF05523	FdtA	0.76
PF13442	Cytochrome_CBB3	0.76
PF05960	DUF885	0.76
PF05569	Peptidase_M56	0.76
PF02738	MoCoBD_1	0.76
PF00753	Lactamase_B	0.76
PF01799	Fer2_2	0.76
PF13899	Thioredoxin_7	0.76
PF00313	CSD	0.76
PF00248	Aldo_ket_red	0.76
PF00378	ECH_1	0.76
PF00230	MIP	0.76
PF07045	DUF1330	0.76
PF13759	2OG-FeII_Oxy_5	0.76
PF05721	PhyH	0.76
PF05768	Glrx-like	0.76
PF03449	GreA_GreB_N	0.76
PF13662	Toprim_4	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	31.30
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	2.29
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.53
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.76
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.76
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.76
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.68 %
Unclassified	root	N/A	8.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	77.86 %
Unclassified	root	N/A	8.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	64.89 %
Unclassified	root	N/A	8.40 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	64.89 %
Unclassified	root	N/A	8.40 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1.53 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	53.44 %
Unclassified	root	N/A	8.40 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	12.98 %
Unclassified	root	N/A	8.40 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	3.05 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium sp. LH3H17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	9.16 %
Unclassified	root	N/A	8.40 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	3.05 %
Phenylobacterium sp. Root77	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root77	2.29 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1.53 %
Phenylobacterium sp. Root700	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root700	0.76 %
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	0.76 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.76 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium sp. LH3H17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	9.16 %
Unclassified	root	N/A	8.40 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	3.05 %
Phenylobacterium sp. Root77	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root77	2.29 %
Alphaproteobacteria bacterium PA2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1.53 %
Streptomyces sp. CNH189	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH189	0.76 %
Phenylobacterium sp. Root700	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root700	0.76 %
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005327\|Ga0070658_10173017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1814	Open in IMG/M
3300005327\|Ga0070658_10638042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	924	Open in IMG/M
3300005327\|Ga0070658_10641192	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005327\|Ga0070658_11135004	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005329\|Ga0070683_101067413	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005329\|Ga0070683_101115259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	758	Open in IMG/M
3300005331\|Ga0070670_100037751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	4155	Open in IMG/M
3300005335\|Ga0070666_10453381	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300005336\|Ga0070680_100266316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1450	Open in IMG/M
3300005336\|Ga0070680_100824347	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005339\|Ga0070660_100084554	All Organisms → cellular organisms → Bacteria → Proteobacteria	2494	Open in IMG/M
3300005339\|Ga0070660_101516772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	570	Open in IMG/M
3300005344\|Ga0070661_100452592	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005366\|Ga0070659_100005136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	9388	Open in IMG/M
3300005366\|Ga0070659_100113739	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300005458\|Ga0070681_10126051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2493	Open in IMG/M
3300005459\|Ga0068867_101513992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	625	Open in IMG/M
3300005529\|Ga0070741_10312890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1469	Open in IMG/M
3300005537\|Ga0070730_10000098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	109815	Open in IMG/M
3300005537\|Ga0070730_10000441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48713	Open in IMG/M
3300005537\|Ga0070730_10583974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	714	Open in IMG/M
3300005539\|Ga0068853_100136720	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300005539\|Ga0068853_100232057	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300005539\|Ga0068853_100849465	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300005563\|Ga0068855_100334199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300005578\|Ga0068854_102146597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	516	Open in IMG/M
3300005586\|Ga0066691_10040269	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300005614\|Ga0068856_100191319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2060	Open in IMG/M
3300005616\|Ga0068852_101552875	Not Available	684	Open in IMG/M
3300005618\|Ga0068864_102296554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	546	Open in IMG/M
3300005618\|Ga0068864_102672053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	505	Open in IMG/M
3300005719\|Ga0068861_102317029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	539	Open in IMG/M
3300005841\|Ga0068863_102384798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH189	539	Open in IMG/M
3300006173\|Ga0070716_101024344	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300006173\|Ga0070716_101426244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	564	Open in IMG/M
3300006237\|Ga0097621_100893584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	827	Open in IMG/M
3300006755\|Ga0079222_11714558	Not Available	603	Open in IMG/M
3300006881\|Ga0068865_101054003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300009093\|Ga0105240_10008207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	14965	Open in IMG/M
3300009093\|Ga0105240_10036638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root77	6308	Open in IMG/M
3300009093\|Ga0105240_10251899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2042	Open in IMG/M
3300009093\|Ga0105240_12079970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	589	Open in IMG/M
3300009093\|Ga0105240_12125168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	583	Open in IMG/M
3300009093\|Ga0105240_12434436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	542	Open in IMG/M
3300009098\|Ga0105245_10141972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2263	Open in IMG/M
3300009101\|Ga0105247_10306840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1103	Open in IMG/M
3300009148\|Ga0105243_10665978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1010	Open in IMG/M
3300009174\|Ga0105241_10861280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	839	Open in IMG/M
3300009176\|Ga0105242_10030579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root77	4300	Open in IMG/M
3300009176\|Ga0105242_13058590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	518	Open in IMG/M
3300009177\|Ga0105248_10004634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15207	Open in IMG/M
3300009551\|Ga0105238_10213926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1904	Open in IMG/M
3300009551\|Ga0105238_10666049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium PA2	1051	Open in IMG/M
3300009551\|Ga0105238_11158105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	797	Open in IMG/M
3300009551\|Ga0105238_11601000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	681	Open in IMG/M
3300010366\|Ga0126379_10722499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1091	Open in IMG/M
3300010371\|Ga0134125_10042744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root77	5044	Open in IMG/M
3300010371\|Ga0134125_11042170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300010373\|Ga0134128_10040250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	5446	Open in IMG/M
3300010375\|Ga0105239_11443596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	795	Open in IMG/M
3300010396\|Ga0134126_10074752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	4202	Open in IMG/M
3300010397\|Ga0134124_10867232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300010398\|Ga0126383_11117226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	878	Open in IMG/M
3300012929\|Ga0137404_10987661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300012957\|Ga0164303_10637649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	708	Open in IMG/M
3300013296\|Ga0157374_10904779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	900	Open in IMG/M
3300013306\|Ga0163162_10498874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1348	Open in IMG/M
3300013306\|Ga0163162_12907014	Not Available	551	Open in IMG/M
3300013307\|Ga0157372_13356495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	510	Open in IMG/M
3300014325\|Ga0163163_10204412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	2023	Open in IMG/M
3300014325\|Ga0163163_10243735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1847	Open in IMG/M
3300014969\|Ga0157376_11128760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	810	Open in IMG/M
3300015051\|Ga0137414_1248307	Not Available	1451	Open in IMG/M
3300015206\|Ga0167644_1003234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	9845	Open in IMG/M
3300015264\|Ga0137403_10261737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1637	Open in IMG/M
3300020001\|Ga0193731_1072740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	898	Open in IMG/M
3300020034\|Ga0193753_10011782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	5516	Open in IMG/M
3300021170\|Ga0210400_10004330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12318	Open in IMG/M
3300021181\|Ga0210388_11369583	Not Available	595	Open in IMG/M
3300021404\|Ga0210389_10035000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	3858	Open in IMG/M
3300021445\|Ga0182009_10433961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	684	Open in IMG/M
3300021475\|Ga0210392_11226641	Not Available	562	Open in IMG/M
3300025900\|Ga0207710_10130659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1206	Open in IMG/M
3300025909\|Ga0207705_10008855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	7337	Open in IMG/M
3300025909\|Ga0207705_10602529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	854	Open in IMG/M
3300025911\|Ga0207654_10532877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	832	Open in IMG/M
3300025912\|Ga0207707_10251475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1535	Open in IMG/M
3300025913\|Ga0207695_10001797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	33844	Open in IMG/M
3300025913\|Ga0207695_10046195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	4617	Open in IMG/M
3300025913\|Ga0207695_10066155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3713	Open in IMG/M
3300025913\|Ga0207695_10088158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	3124	Open in IMG/M
3300025913\|Ga0207695_11670438	Not Available	518	Open in IMG/M
3300025914\|Ga0207671_11600553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	501	Open in IMG/M
3300025917\|Ga0207660_10814451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	762	Open in IMG/M
3300025919\|Ga0207657_10066197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. Root700	3076	Open in IMG/M
3300025919\|Ga0207657_11411914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	522	Open in IMG/M
3300025920\|Ga0207649_10360545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	1078	Open in IMG/M
3300025921\|Ga0207652_11295569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	631	Open in IMG/M
3300025924\|Ga0207694_10023691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	4661	Open in IMG/M
3300025924\|Ga0207694_11336218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	606	Open in IMG/M
3300025927\|Ga0207687_10157569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1739	Open in IMG/M
3300025932\|Ga0207690_10004845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	7941	Open in IMG/M
3300025934\|Ga0207686_10657532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	830	Open in IMG/M
3300025938\|Ga0207704_10000936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	12924	Open in IMG/M
3300025938\|Ga0207704_10438834	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300025939\|Ga0207665_11644433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	509	Open in IMG/M
3300025941\|Ga0207711_10068231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	3079	Open in IMG/M
3300026041\|Ga0207639_11137113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	733	Open in IMG/M
3300026041\|Ga0207639_12305069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	500	Open in IMG/M
3300026078\|Ga0207702_10363908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1387	Open in IMG/M
3300026088\|Ga0207641_10897731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	880	Open in IMG/M
3300026095\|Ga0207676_11854205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	602	Open in IMG/M
3300026118\|Ga0207675_100302048	Not Available	1559	Open in IMG/M
3300026142\|Ga0207698_11136369	Not Available	794	Open in IMG/M
3300027857\|Ga0209166_10000406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49315	Open in IMG/M
3300027857\|Ga0209166_10000581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	38193	Open in IMG/M
3300028379\|Ga0268266_10000003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1701703	Open in IMG/M
3300030520\|Ga0311372_10966180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10162228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	617	Open in IMG/M
3300031231\|Ga0170824_122804197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	527	Open in IMG/M
3300031251\|Ga0265327_10066566	Not Available	1818	Open in IMG/M
3300031446\|Ga0170820_11660622	Not Available	576	Open in IMG/M
3300031474\|Ga0170818_114950769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	637	Open in IMG/M
3300031711\|Ga0265314_10716337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	505	Open in IMG/M
3300031938\|Ga0308175_100003790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	10531	Open in IMG/M
3300031939\|Ga0308174_10061727	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300031939\|Ga0308174_10107120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	2016	Open in IMG/M
3300031939\|Ga0308174_10748707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	818	Open in IMG/M
3300032074\|Ga0308173_10613416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	987	Open in IMG/M
3300032180\|Ga0307471_100371992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1547	Open in IMG/M
3300032256\|Ga0315271_10528706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1002	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.83%
Environmental	Environmental	38.17%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.83%
Terrestrial	Environmental → Terrestrial	37.40%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.22%
Soil	Environmental → Terrestrial → Soil	36.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.32%
Roots	Host-Associated → Plants → Roots	2.29%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Peat	Environmental → Terrestrial → Peat	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.27%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.29%
Lake	Environmental → Aquatic → Freshwater → Lake	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	16.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	11.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.58%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070658_101730172	3300005327	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGEFFWLMIFFVVMATSLLAAARRWAGHLRRAVVRPQGRRQ*
Ga0070658_106380421	3300005327	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLLIFFVVMATSLLAAARRWAGHLKRAVSQTRGRKAS*
Ga0070658_106411922	3300005327	Corn Rhizosphere	LVMWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT*
Ga0070658_111350041	3300005327	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAAHGRTRELFWLMIFFVVMATSLLAAARRWAGQLRRAMTPKLRTR*
Ga0070683_1010674131	3300005329	Corn Rhizosphere	LIMWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFLVVMATSLLAAARRWAGHLRRAASGVRTRRSL*
Ga0070683_1011152591	3300005329	Corn Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHGRAQELFWLMIFCVVMATSLLAAARRWAGHFRRVAVRATPRRRN*
Ga0070670_1000377512	3300005331	Switchgrass Rhizosphere	MTMWLRVGGALLVTLAAIAVLEWLGVGAILGGRSADEAREHAQGRTGELFWLMVFAVVMATALLAAVRRWAGQVRRALSPVRRGRTFD*
Ga0070666_104533812	3300005335	Switchgrass Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHGRAQELFWLMIFCVVMATSLLAAARRWAGHFRRVAVRATPRPRD*
Ga0070680_1002663162	3300005336	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT*
Ga0070680_1008243471	3300005336	Corn Rhizosphere	RLIMWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFLVVMATSLLAAARRWAGQLKRAITRRPRD*
Ga0070660_1000845541	3300005339	Corn Rhizosphere	LVMWFRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEFGDAARGRTGEIFWLMIFFVVMATSLLAAARRWAGHLRRAMARPQGRRRG*
Ga0070660_1015167722	3300005339	Corn Rhizosphere	LAAIGALEYFGVSRVLGGRTPDEVGEATRGRAGELFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQDRGRG*
Ga0070661_1004525922	3300005344	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFFVVMATSLLAAARRWAGQLKRAITRRPRD*
Ga0070659_10000513610	3300005366	Corn Rhizosphere	MWFRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEFGDAARGRTGEIFWLMIFFVVMATSLLAAARRWAGHLRRAMARPQGRRRG*
Ga0070659_1001137394	3300005366	Corn Rhizosphere	DLGDGRLVMWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT*
Ga0070681_101260512	3300005458	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFLVVMATSLLAAARRWAGQLKRAITRRPRD*
Ga0068867_1015139922	3300005459	Miscanthus Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHGRAQELFWLMIFCVVMATSLLAAARRWAGHFRRVA
Ga0070741_103128902	3300005529	Surface Soil	VIMWLRLAGALLVTLAAIGALEYLGVGRLLGGRSAEDASPAAQARAQEIFWMSIFLVVWATSILAAMRRWAGHFHSFAVRQARRR*
Ga0070730_1000009889	3300005537	Surface Soil	MWLRLAGAVLVTLGAIGALEYFGVSRILGGRTPDDAQSSYAPAKEIFWVAIFFVVWATSLLAAARRWGGQLKRALAGPAKR*
Ga0070730_1000044140	3300005537	Surface Soil	MRPLVCRFLGGARLIMWLRLIGALLVTLAAIGALEYFGVSRILGGRAPDDAPSAAYGPSREIFWLLIFFVVMATALLAAARRWAGHLKRAISQPRAPRP*
Ga0070730_105839742	3300005537	Surface Soil	MWLRLAGALLVTLFAIGALEYFGVSRLLGGRAPDDAPAAAYAPAREMFWVMIFFVVMATSLLAAARRWAEHLKRAMAASPGRRRG*
Ga0068853_1001367201	3300005539	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRTPDEVGEATRGRAGELFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQDRGRG*
Ga0068853_1002320572	3300005539	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDEAPSAAYGPNREVFWLAIFFVVMATSLLAAARRWAGQLKRAITRRPRD*
Ga0068853_1008494652	3300005539	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGELFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQGRRRS*
Ga0068855_1003341992	3300005563	Corn Rhizosphere	MFRAVSQASDVRGMDALIMWFRLAGALLVTLLAIGALEYLGVGRLLGGRSAEDASPEAQARAQEVFWAMIFLVVWGTSILAALRRWAGHFHSFAVRQVRRR*
Ga0068854_1021465971	3300005578	Corn Rhizosphere	TLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGELFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQGRRRS*
Ga0066691_100402692	3300005586	Soil	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGDAAHGRTGELFWLMIFFVVMATSMLAAARRWAGHLRRAVSVRPQPRRRD*
Ga0068856_1001913193	3300005614	Corn Rhizosphere	MWLRLAGAVLVTLCAIGALEYFGVSRILGGRAPDDAQASYAPAKEIFWVAIFFVVWATSLLAAARRWGGHLKRAVARPAKR*
Ga0068852_1015528751	3300005616	Corn Rhizosphere	RSQGETSLIRSRRELTSVAARTMFRAVSQASDVRGMDALIMWFRLAGALLVTLLAIGALEYLGVGRLLGGRSAEDASPEAQARAQEVFWAMIFLVVWGTSILAALRRWAGHFHSFAVRQVRRR*
Ga0068864_1022965541	3300005618	Switchgrass Rhizosphere	MIMWLRLAGAVLVTLAAIGALEYFGIGRLLGGRTADDAQAAAHERAQELFWLMIFFVVMATSLLAAARRWAGHFKRAVAPRRDR*
Ga0068864_1026720532	3300005618	Switchgrass Rhizosphere	MVMWLRLAGALLVTLLAIGAMEYFGVSRILGGRAPDNAPAAANGRLGEAFWLIIFFVVMATSLLAAARRWTDHLRHATTPEQPPQRRRA*
Ga0068861_1023170291	3300005719	Switchgrass Rhizosphere	MTMWLRVGGALLVTLAAIAVLEWLGVGAILGGRSADEAREHAQGRTGELFWLMVFAVVMATALLAAVRRWAGQ
Ga0068863_1023847981	3300005841	Switchgrass Rhizosphere	MIMWLRLAGALVVTLAAIGALEYFGIGRLLGGRSADNAQSAAHGRAQELFWLMIFFVVMATSLLAAARRGREQLVRALRRRS*
Ga0070716_1010243441	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLMWLRLAGALAVTLTAIGALEYFGVGSLLGGRSADDAPAAAGRSRELFWLMIFVVVMATSLLAAARRWAGHFRRVAIPAQARRRP*
Ga0070716_1014262441	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LLVTLAAIGALEYFGVSRLLGGRSAGEVQEAAHGRTRELFWLMIFFVVMATSLLAAARRWAGQLRRAVSRPQRSRKT*
Ga0097621_1008935841	3300006237	Miscanthus Rhizosphere	MIMWLRLAGALVVTLAAIGALEYFGVGRLLGGRSADNAQSAANGRAQELFWLMIFFVVMATSLLAAARRWAGHFRRVAVRAAPKRR*
Ga0079222_117145582	3300006755	Agricultural Soil	MDALVMWFRLAGALLVTLLAIGALEYLGVGRLLGGRTAEDASPEAQARAQELFWAMIFLVVWGTSILAALRRWGGHFHSFAVRQVRRR*
Ga0068865_1010540031	3300006881	Miscanthus Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRTPDDAPSAAYGPGRELFWTAIFFVVMATSLLAAARRVAGRARQALRAPAGRRRPG*
Ga0105240_1000820716	3300009093	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLLIFFVVMATSLLAAARRWAGHLKRAMTQPRGRRPS*
Ga0105240_100366387	3300009093	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAANGRTRELFWLLIFFVVMATSLLAAARRWAGQLKRAMTRGAGA*
Ga0105240_102518992	3300009093	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAANGRTRELFWLMIFFVVMATSLLAAARRWAGQLKRALARPSRRRAN*
Ga0105240_120799701	3300009093	Corn Rhizosphere	MIMWLRLAGAVLVTLAAIGALEYFGIGRLLGGRTADDAQAAAHERAQELFWLMIFCVVMATSLLAAARRWAGHFRRVADRATPRR
Ga0105240_121251681	3300009093	Corn Rhizosphere	FWGSARLIMWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDEAPSAAYGPNREVFWLAIFFVVMATSLLAAARRWAGQLKRAITRRPRD*
Ga0105240_124344362	3300009093	Corn Rhizosphere	GALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFFVVMATSLLAAARRWAGQLKRAITRRPRD*
Ga0105245_101419723	3300009098	Miscanthus Rhizosphere	MWLRLSGALLVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLMIFFVVMATSLLAAARRWAGHLKRATTRAPGGRRA*
Ga0105247_103068402	3300009101	Switchgrass Rhizosphere	MAVMTMWLRVGGALLVTLAAIAVLEWLGVGAILGGRSADEAREHAQGRTGELFWLMVFAVVMATALLAAVRRWAGQVRRALSPVRRGRTFD*
Ga0105243_106659782	3300009148	Miscanthus Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHARAQELFWLMIFFVVMATSLLAAARRWAGQLRRAMARAPRT*
Ga0105241_108612801	3300009174	Corn Rhizosphere	MIMWLRLAGALVVTLGAIGALEYFGVSTLLGGRSAEVQEAAHTRARELFWLMIFFVVMATSLLAAARRWAGHFRRVATPAPGKRQTSD*
Ga0105242_100305792	3300009176	Miscanthus Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAANGRTRELFWLLIFFVVMATSLLAAARRWAGQLRRAMARAPRT*
Ga0105242_130585902	3300009176	Miscanthus Rhizosphere	MIMWLRLAGALVVTLAAIGALEYFGVGRLLGGRSADNAQSAAHDRAQELFWLMIFFVVMATSLLAAARRWAGHFRRVAVRAAPKRR*
Ga0105248_100046345	3300009177	Switchgrass Rhizosphere	MIMWLRLAGALVVTLGAIGALEYFGVSTLLGGRSAEVQEAAHTRARELFWLMIFFVVMATSLLAAARRWAGHFRRVATPAPAKRQTSD*
Ga0105238_102139262	3300009551	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGEFFWLMIFFVVMATSLLAAARRWAGHLRRAVVRPRGRRQ*
Ga0105238_106660492	3300009551	Corn Rhizosphere	RLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT*
Ga0105238_111581052	3300009551	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLMGGRSPDEVQEAANGRTRELFWLLNFFVVMATSLLAAARRWAGQLRRAMARGAQP*
Ga0105238_116010001	3300009551	Corn Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHARAQELFWLMIFCVVMATSLLAAARRWAGHFRRVAVRATPRRRN*
Ga0126379_107224992	3300010366	Tropical Forest Soil	MIMWLRLAGALFVTLAAIGALEYFGVGRLLGGRSAQEASPEAQARAQELFWLGIFLVVWATSILAAMRRWAGHLQSFAVRHARARR*
Ga0134125_100427448	3300010371	Terrestrial Soil	MWFRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEATRGRTGEIFWLMIFFVVMATSLLAASRRWAGHLRRAVVRPQDRRRT*
Ga0134125_110421702	3300010371	Terrestrial Soil	MFGAAPRQDMGDGFLFMWLRLAGALLVTLAAIGALEYFGVSRLLGGRAPDEAPAAAYVPNREIFWLVIFLVVMATSLLAAARRWAGHLRRAFSVRA*
Ga0134128_100402507	3300010373	Terrestrial Soil	MIMWLRLAGALLVTLAAIGALEYFGVGRLLGGRTAEDASPAAHARAQELFWLGIFLVVWATSILAAMRRWAGHLQSFAVRQARARR*
Ga0105239_114435962	3300010375	Corn Rhizosphere	MIMWLRLAGALVVTLGAIGALEYFGVSTLLGGRSNEVQEAAHTRARELFWLMIFFVVMATSLLAAARRWAGHFRRVATPAQAKRQTSD*
Ga0134126_100747522	3300010396	Terrestrial Soil	MWLRLSGALAVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLMIFFVVMATSLLAAARRWAGHLKRAVSRAPGGRGGQGGA*
Ga0134124_108672322	3300010397	Terrestrial Soil	MWLRLGGALLVTLAALGCLDYFGVWSILSGRTAEDAPETAHRTRELFWLMIFWVVMATALLAAARRWMSYLRIGRRPA*
Ga0126383_111172261	3300010398	Tropical Forest Soil	MIMWLRLAGALLVTLAAIGALEYLGVGRLLGGRSADDASPAAQARAQELFWFGIFIVVWATSILAAMRRWAGHLQSLATRQVRRR
Ga0137404_109876612	3300012929	Vadose Zone Soil	MWLRLAGALLVTLAAIGALEYFGVSRILGGRSPDEAPSAAGRTGELFWLVIFFVVMATSLLAAGRRWAGHLRRAVASGPRDRRPS*
Ga0164303_106376491	3300012957	Soil	MIMWLRLAGALVVTLAAIGALEYFGVGRLLGGRSADNAQSAAHGRAQELFWLMIFFVVWATSLLAAARRWAGHFRSFAARQAARSRRG*
Ga0157374_109047792	3300013296	Miscanthus Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEAPAAAGPGRELFWLMIFFVVMATSLLAAARRVAGRMRQAVRLPTGRRRPG*
Ga0163162_104988741	3300013306	Switchgrass Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHGRAQELFWLMIFCVVMATSLLAAARRWAGHFRRVAVRATPRRRG*
Ga0163162_129070141	3300013306	Switchgrass Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHARAQELFWLMIFFVVMATSLLAAARRWAGHFRRVAVRANPRRRA*
Ga0157372_133564951	3300013307	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLLIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT*
Ga0163163_102044122	3300014325	Switchgrass Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHGRAQELFWLMIFCVVMATSLLAAARRWAGHFRRVAVRATPRRRD*
Ga0163163_102437352	3300014325	Switchgrass Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEAPAAASRTRELFWLLIFFVVMATSLLAAARRWAGHLRRAVAPSSRTGRPD*
Ga0157376_111287602	3300014969	Miscanthus Rhizosphere	MIMWLRLAGALVVTLAAIGALEYFGVGRLLGGRSADNAQSAANDRAQELFWLMIFFVVMATSLLAAARRWAGHFRRVAVRAAPRRRD*
Ga0137414_12483073	3300015051	Vadose Zone Soil	MWLRLTGAVAITLIALGAFEYFGVSRLIGGQGGDEMQDAARTRSREVFWLFIFVVVMATSMLAAVRRWAGHLRRAKS*
Ga0167644_10032345	3300015206	Glacier Forefield Soil	MLQASVARTDLGDGRLIMWLRLAGALLVTLVGIGALEYFGVSRLLGGRAPDEAPASAYAPAREMFWVMIFCVVMATSLLAAARRWAGHLKRATISRRG*
Ga0137403_102617373	3300015264	Vadose Zone Soil	MWLRLVGALLVTLAAIGALEYFGVSRILGGRSPDEAPSAAGRTGELFWLVIFFVVMATSLLAAGRRWAGHLRRAVASGPRDRRPS*
Ga0193731_10727402	3300020001	Soil	MWLRLAGALLVTLAAISRLLGARAPEDAPATAGPTRELFWLLIFLVVMATSLLAAARRWAGHLRRALVNPQKRRAT
Ga0193753_100117823	3300020034	Soil	MWLRLAGALLVTLAAIGALEYFGVSRILGARAPDDAPAAHGRLGEFFWLMMFFVVMGTSLLAAARRWAGHLRRAANPQPRRRA
Ga0210400_100043308	3300021170	Soil	MWLRLAGALLVTLFAIGALEYFGVSRLLGGRAPDDAPAAAYAPAREMFWVMIFFVVMATSLLAAARRWAEHLKRAMAASPGRRRG
Ga0210388_113695831	3300021181	Soil	MWLRLAGAVVVTLCAIGALEYFGVSRILGGRTPDDAQASYAPAKEIFWVAIFFVVWATSLLAAVRRWGGHLKRAIVRPAPRR
Ga0210389_100350001	3300021404	Soil	MWLRLAGALLVTLAAIGVLEYFGVSRLLGGRSPDEVQEAAHGRTRELFWLAIFFVVMATSLLAAARRSVGRLRQAVTVRAAKRPPG
Ga0182009_104339611	3300021445	Soil	MIMWLRLTGALLVTLAAIGALEYFGVGRLLNGRTADNASPAAQERARELFWMLIFCVVMATSLLAAARRWAGHFKRFAVRQARKA
Ga0210392_112266411	3300021475	Soil	MWLRLAGAVLVTLCAIGALEYFGVSRILGGRTPDDAQGSYAPAKEIFWVAIFFVVWATSLLAAVRRWGGHLKRAVARTPKR
Ga0207710_101306592	3300025900	Switchgrass Rhizosphere	MTMWLRVGGALLVTLAAIAVLEWLGVGAILGGRSADEAREHAQGRTGELFWLMVFAVVMATALLAAVRRWAGQVRRALSPVRRGRTFD
Ga0207705_100088556	3300025909	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT
Ga0207705_106025292	3300025909	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGEFFWLMIFFVVMATSLLAAARRWAGHLRRALVRPRDRRQ
Ga0207654_105328772	3300025911	Corn Rhizosphere	MIMWLRLAGALVVTLGAIGALEYFGVSTLLGGRSAEVQEAAHTRARELFWLMIFFVVMATSLLAAARRWAGHFRRVATPAPGKRQTSD
Ga0207707_102514751	3300025912	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFLVVMATSLLAAARRWAGQLKRAITRRPRD
Ga0207695_1000179734	3300025913	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLLIFFVVMATSLLAAARRWAGHLKRAMTQPRGRRPS
Ga0207695_100461955	3300025913	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDEAPSAAYGPNREVFWLAIFFVVMATSLLAAARRWAGQLKRAITRRPRD
Ga0207695_100661552	3300025913	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAANGRTRELFWLLIFFVVMATSLLAAARRWAGQLKRAMTRGAGA
Ga0207695_100881584	3300025913	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAANGRTRELFWLMIFFVVMATSLLAAARRWAGQLKRALARPSRRRAN
Ga0207695_116704381	3300025913	Corn Rhizosphere	ALIMWFRLAGALLVTLLAIGALEYLGVGRLLGGRSAEDASPEAQARAQEVFWAMIFLVVWGTSILAALRRWAGHFHSFAVRQVRRR
Ga0207671_116005532	3300025914	Corn Rhizosphere	MIMWLRLAGALVVTLGAIGALEYFGVSTLLGGRSAEVQEAAHTRARELFWLMIFFVVMATSLLAAARRWAGHFRRVATPAQAKRQTSD
Ga0207660_108144511	3300025917	Corn Rhizosphere	RLIMWLRLAGALLVTLAAIGALEYFGVSRLLGARTPDDAPSAAYGPNREVFWLAIFLVVMATSLLAAARRWAGQLKRAITRRPRD
Ga0207657_100661975	3300025919	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGEFFWLMIFFVVMATSLLAAARRWAGHLRRAVVRPRGRRQ
Ga0207657_114119142	3300025919	Corn Rhizosphere	RLVMWFRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEFGDAARGRTGEIFWLMIFFVVMATSLLAAARRWAGHLRRAMARPQGRRRG
Ga0207649_103605451	3300025920	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGEFFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQGRRRS
Ga0207652_112955691	3300025921	Corn Rhizosphere	LVMWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPPGRRRT
Ga0207694_100236914	3300025924	Corn Rhizosphere	MFRAVSQASDVRGMDALIMWFRLAGALLVTLLAIGALEYLGVGRLLGGRSAEDASPEAQARAQEVFWAMIFLVVWGTSILAALRRWAGHFHSFAVRQVRRR
Ga0207694_113362182	3300025924	Corn Rhizosphere	LIMWLRLAGALLVTLAAIGALEYFGVSRLMGGRSPDEVQEAANGRTRELFWLLNFFVVMATSLLAAARRWAGQLRRAMARGAQP
Ga0207687_101575692	3300025927	Miscanthus Rhizosphere	MWLRLSGALLVTLAAIGALEYFGVSRLLGGRSPDEATAAAGRNRELFWLMIFFVVMATSLLAAARRWAGHLKRATTRAPGGRRA
Ga0207690_1000484510	3300025932	Corn Rhizosphere	MWFRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEFGDAARGRTGEIFWLMIFFVVMATSLLAAARRWAGHLRRAMARPQGRRRG
Ga0207686_106575322	3300025934	Miscanthus Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAANGRTRELFWLLIFFVVMATSLLAAARRWAGQLRRAMARAPRT
Ga0207704_1000093614	3300025938	Miscanthus Rhizosphere	MIMWFRLAGALVVTLAAIGALEYFGVGRLLGGRSADDAQSAAHGRAQELFWLMIFCVVMATSLLAAARRWAGHFRRVAVRATPRPRD
Ga0207704_104388342	3300025938	Miscanthus Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRLLGGRTPDDAPSAAYGPGRELFWTAIFFVVMATSLLAAARRVAGRARQALRAPAGRRRPG
Ga0207665_116444331	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	CSRRDLGDGRMLMWLRLAGALAVTLTAIGALEYFGVGSLLGGRSADDAPAAAGRSRELFWLMIFVVVMATSLLAAARRWAGHFRRVAIPAQARRRP
Ga0207711_100682315	3300025941	Switchgrass Rhizosphere	MIMWLRLAGALVVTLGAIGALEYFGVSTLLGGRSAEVQEAAHTRARELFWLMIFFVVMATSLLAAARRWAGHFRRVATPAPAKRQTSD
Ga0207639_111371131	3300026041	Corn Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRTPDEVGEATRGRAGELFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQDRGRG
Ga0207639_123050692	3300026041	Corn Rhizosphere	TRRHSGSMFGASSRGDLGDGRLVMWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGELFWLMIFFVVMATSLLAAARRWAGHLRRAMVRPQGRRRS
Ga0207702_103639082	3300026078	Corn Rhizosphere	MWLRLAGAVLVTLCAIGALEYFGVSRILGGRAPDDAQASYAPAKEIFWVAIFFVVWATSLLAAARRWGGHLKRAVARPAKR
Ga0207641_108977312	3300026088	Switchgrass Rhizosphere	MIMWLRLAGALVVTLAAIGALEYFGIGRLLGGRSADNAQSAAHGRAQELFWLMIFFVVMATSLLAAARRWAGHFRRVAVRAAPKRR
Ga0207676_118542052	3300026095	Switchgrass Rhizosphere	MVMWLRLAGALLVTLLAIGAMEYFGVSRILGGRAPDNAPAAANGRLGEAFWLIIFFVVMATSLLAAARRWTDHLRHATTPEQPPQRRRA
Ga0207675_1003020481	3300026118	Switchgrass Rhizosphere	MTMWLRVGGALLVTLAAIAVLEWLGVGAILGGRSADEAREHAQGRTGELFWLMVFAVVMATALLAAVRRWAGQMRRA
Ga0207698_111363691	3300026142	Corn Rhizosphere	MIMWFRLAGALLVTLLAIGALEYLGVGRLLGGRSAEDASPEAQARAQEVFWAMIFLVVWGTSILAALRRWAGHFHSFAVRQVRRR
Ga0209166_1000040623	3300027857	Surface Soil	MRPLVCRFLGGARLIMWLRLIGALLVTLAAIGALEYFGVSRILGGRAPDDAPSAAYGPSREIFWLLIFFVVMATALLAAARRWAGHLKRAISQPRAPRP
Ga0209166_1000058128	3300027857	Surface Soil	MWLRLAGAVLVTLGAIGALEYFGVSRILGGRTPDDAQSSYAPAKEIFWVAIFFVVWATSLLAAARRWGGQLKRALAGPAKR
Ga0268266_10000003129	3300028379	Switchgrass Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAQGRTGEFFWLMIFFVVMATSLLAAARRWAGHLRRAVVRPQGRRQ
Ga0311372_109661802	3300030520	Palsa	MWLRLAGAVVVTLAAIGALEYFGVSRILGPRAPDEAPAAAYAPAREIFWVMIFFVVMATSLLAAARRWAGHLKRALAGPRR
(restricted) Ga0255310_101622281	3300031197	Sandy Soil	MIMWLRLAGALLVTLAAIGALEYFGVSRLLGGRTADDASPAAQERARELFWLMIFFVVMATSLLAAARRWAGHFKRVAVRAAPGRRA
Ga0170824_1228041971	3300031231	Forest Soil	LIMWLRLAGALLVTLVAIGALEYFGVSRVLGGRAPEEARAAAYAPAKEVFWLMIFFVVMATSLLAAARRWAGHLKRA
Ga0265327_100665661	3300031251	Rhizosphere	MWLRLAGALLVTLAAIGALEYFGVSRMLGGRTPEEAPAAAYAPAREIFWVMIFFVVMATSVLAACRRWAGQLKRAVARR
Ga0170820_116606222	3300031446	Forest Soil	MLGTSVARTDLGDGRLIMWLRLAGALLVTLAAIGALEYFGVSRLLGGRSPDEVQEAAHGRTRELFWLLIFFVVMATSLLAAARRSAGRLRQ
Ga0170818_1149507692	3300031474	Forest Soil	MWLRLAGALLVTLVAIGALEYFGVSRVLGGRAPEEARAAAYAPAKEVFWLMIFFVVMATSLLAAARRWAGHLKRAVSTPPGRRP
Ga0265314_107163371	3300031711	Rhizosphere	LIMWLRLAGALLVTLAAIGALEYFGVSRMLGGRTPEDAPAAAYAPAREIFWVMIFFVVMATSVLAACRRWAGQLKRAVAHR
Ga0308175_1000037905	3300031938	Soil	MDALIMWFRLAGALLVTLLAIGALEYLGVGRLLGGRSAEDASPEAQARAQELFWAMIFLVVWGTSLLAAMRRWAGHFHSFAVRQVRRR
Ga0308174_100617273	3300031939	Soil	MWLRLSGALLVTLAAIGALEYFGISRLLGGRSPDEATAAAGRNRELFWLMIFFVVMATSLLAAARRWAEHLKRAMARAPRGRGRS
Ga0308174_101071202	3300031939	Soil	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGEAARGRTGELFWLMIFFVVMATSLLAAGRRWAGHLRRAVVRPQGRRRT
Ga0308174_107487072	3300031939	Soil	MIMWLRLAGAVLVTLAAIGALEYFGIGRLLGGRTADDAQAAAHERAQELFWLMIFFVVMATSLLAAARRWAGHLKHAVAPRRDR
Ga0308173_106134162	3300032074	Soil	MVMWLRLAGALLVTLAAIGALEYFGVGRLLGGRSADEVQGAANTRASELFWLMIFFVVMATSLLAAARRWAGHLRSVAARAAPKRR
Ga0307471_1003719922	3300032180	Hardwood Forest Soil	MWLRLAGALLVTLAAIGALEYFGVSRVLGGRSPDEVGDAAHGRTGELFWLMIFFVVMATSMLAAARRWAGHLRRAVSVRPQPRRRA
Ga0315271_105287062	3300032256	Sediment	MGEWRLIMWLRLAGALLVTLLAIGALEVFGVGRLLGGRAPDEAPSAAYGRGEIFWLLIFLVVMATSLLAAGRRWAEQLKRSLSPSPDRRRRTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters