Metagenome / Metatranscriptome Family F062075

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062075
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	41 residues
Representative Sequence	LYTDSNVVDGSSYCYATTAVNTSNEESGYSNIVSNVQIPAP
Number of Associated Samples	107
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.29 %
% of genes near scaffold ends (potentially truncated)	93.89 %
% of genes from short scaffolds (< 2000 bps)	81.68 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.122 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.687 % of family members)
Environment Ontology (ENVO)	Unclassified (28.244 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.305 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.84% Coil/Unstructured: 81.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF15780	ASH	12.21
PF13439	Glyco_transf_4	1.53
PF01850	PIN	1.53
PF04616	Glyco_hydro_43	1.53
PF13618	Gluconate_2-dh3	1.53
PF00723	Glyco_hydro_15	1.53
PF01261	AP_endonuc_2	0.76
PF00085	Thioredoxin	0.76
PF07589	PEP-CTERM	0.76
PF07676	PD40	0.76
PF13424	TPR_12	0.76
PF02357	NusG	0.76
PF13242	Hydrolase_like	0.76
PF13649	Methyltransf_25	0.76
PF00069	Pkinase	0.76
PF02687	FtsX	0.76
PF00857	Isochorismatase	0.76
PF00171	Aldedh	0.76
PF03720	UDPG_MGDP_dh_C	0.76
PF00733	Asn_synthase	0.76
PF06662	C5-epim_C	0.76
PF01061	ABC2_membrane	0.76
PF13692	Glyco_trans_1_4	0.76
PF00144	Beta-lactamase	0.76
PF08308	PEGA	0.76
PF02350	Epimerase_2	0.76
PF00012	HSP70	0.76
PF14384	BrnA_antitoxin	0.76
PF07238	PilZ	0.76
PF13646	HEAT_2	0.76
PF00534	Glycos_transf_1	0.76
PF13432	TPR_16	0.76
PF04392	ABC_sub_bind	0.76
PF13561	adh_short_C2	0.76
PF02604	PhdYeFM_antitox	0.76
PF04041	Glyco_hydro_130	0.76
PF08238	Sel1	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.05
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	1.53
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.76
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.76
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.76
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.76
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.76
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.76
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.76
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.12 %
Unclassified	root	N/A	35.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.12 %
Unclassified	root	N/A	35.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.12 %
Unclassified	root	N/A	35.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.93 %
Unclassified	root	N/A	35.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.34 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.53 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.76 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.34 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.53 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.48 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.29 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	1.53 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.48 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.53 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.76 %
Geopsychrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geopsychrobacter	0.76 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.48 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.53 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.76 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.76 %
Geopsychrobacter electrodiphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geopsychrobacter → Geopsychrobacter electrodiphilus	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.48 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.53 %
Geobacter sp. M18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp. M18	0.76 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.76 %
Geopsychrobacter electrodiphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geopsychrobacter → Geopsychrobacter electrodiphilus	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01EH6NQ	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1021180	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	563	Open in IMG/M
3300000789\|JGI1027J11758_12679346	Not Available	696	Open in IMG/M
3300000955\|JGI1027J12803_103169064	Not Available	513	Open in IMG/M
3300001593\|JGI12635J15846_10447528	Not Available	770	Open in IMG/M
3300002245\|JGIcombinedJ26739_101216889	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300004152\|Ga0062386_100572296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300004152\|Ga0062386_101858547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300004479\|Ga0062595_100005850	All Organisms → cellular organisms → Bacteria	3585	Open in IMG/M
3300005186\|Ga0066676_10715168	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005526\|Ga0073909_10163261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300005537\|Ga0070730_10938971	Not Available	541	Open in IMG/M
3300005542\|Ga0070732_10672803	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005568\|Ga0066703_10231054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300005575\|Ga0066702_10237341	Not Available	1111	Open in IMG/M
3300005610\|Ga0070763_10900342	Not Available	526	Open in IMG/M
3300005764\|Ga0066903_105671497	Not Available	657	Open in IMG/M
3300005874\|Ga0075288_1008767	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005921\|Ga0070766_11051476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300006052\|Ga0075029_100001041	All Organisms → cellular organisms → Bacteria	15901	Open in IMG/M
3300006059\|Ga0075017_101576745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300006086\|Ga0075019_10740750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	623	Open in IMG/M
3300006162\|Ga0075030_101491562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006174\|Ga0075014_100045588	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300006176\|Ga0070765_100021223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4865	Open in IMG/M
3300006176\|Ga0070765_101084882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300006237\|Ga0097621_100786963	Not Available	881	Open in IMG/M
3300006755\|Ga0079222_12280496	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006854\|Ga0075425_103131822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geopsychrobacter → Geopsychrobacter electrodiphilus	504	Open in IMG/M
3300006893\|Ga0073928_11216705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp. M18	507	Open in IMG/M
3300006954\|Ga0079219_11059407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300007076\|Ga0075435_101031614	Not Available	718	Open in IMG/M
3300009549\|Ga0116137_1082321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	972	Open in IMG/M
3300009759\|Ga0116101_1199114	Not Available	510	Open in IMG/M
3300009824\|Ga0116219_10008700	All Organisms → cellular organisms → Bacteria	6804	Open in IMG/M
3300009824\|Ga0116219_10809067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010048\|Ga0126373_10536966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1216	Open in IMG/M
3300010048\|Ga0126373_11761194	Not Available	683	Open in IMG/M
3300010048\|Ga0126373_12735340	Not Available	551	Open in IMG/M
3300010341\|Ga0074045_10084977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2209	Open in IMG/M
3300010358\|Ga0126370_12489562	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010361\|Ga0126378_10628872	Not Available	1187	Open in IMG/M
3300010361\|Ga0126378_11418538	Not Available	786	Open in IMG/M
3300010366\|Ga0126379_10187779	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300010366\|Ga0126379_11719693	Not Available	732	Open in IMG/M
3300010376\|Ga0126381_101234671	Not Available	1080	Open in IMG/M
3300010376\|Ga0126381_101357567	Not Available	1027	Open in IMG/M
3300010376\|Ga0126381_102366749	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300010376\|Ga0126381_103999509	Not Available	574	Open in IMG/M
3300010379\|Ga0136449_101416144	Not Available	1072	Open in IMG/M
3300010398\|Ga0126383_10087147	Not Available	2747	Open in IMG/M
3300010398\|Ga0126383_10614260	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300010937\|Ga0137776_1352821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1637	Open in IMG/M
3300012207\|Ga0137381_11356892	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012363\|Ga0137390_10714928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300012961\|Ga0164302_11890044	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300014169\|Ga0181531_10576468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300014501\|Ga0182024_10367538	Not Available	1873	Open in IMG/M
3300014501\|Ga0182024_11813121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300015371\|Ga0132258_11679943	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300017938\|Ga0187854_10194855	Not Available	898	Open in IMG/M
3300017955\|Ga0187817_10484256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	789	Open in IMG/M
3300017959\|Ga0187779_10019964	All Organisms → cellular organisms → Bacteria	3818	Open in IMG/M
3300017972\|Ga0187781_10000027	All Organisms → cellular organisms → Bacteria	92465	Open in IMG/M
3300017972\|Ga0187781_10953353	Not Available	626	Open in IMG/M
3300017975\|Ga0187782_10171164	Not Available	1621	Open in IMG/M
3300017975\|Ga0187782_11099983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300017995\|Ga0187816_10028533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2248	Open in IMG/M
3300017995\|Ga0187816_10435438	Not Available	585	Open in IMG/M
3300017995\|Ga0187816_10505924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300018006\|Ga0187804_10254116	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300018006\|Ga0187804_10460190	Not Available	568	Open in IMG/M
3300018042\|Ga0187871_10638519	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300018047\|Ga0187859_10195688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300018057\|Ga0187858_10389725	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300018062\|Ga0187784_10077077	All Organisms → cellular organisms → Bacteria	2706	Open in IMG/M
3300018085\|Ga0187772_10048177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2607	Open in IMG/M
3300018086\|Ga0187769_10594733	Not Available	836	Open in IMG/M
3300018090\|Ga0187770_11726780	Not Available	512	Open in IMG/M
3300018433\|Ga0066667_12350002	Not Available	500	Open in IMG/M
3300020579\|Ga0210407_10048186	All Organisms → cellular organisms → Bacteria → Acidobacteria	3177	Open in IMG/M
3300020579\|Ga0210407_11004624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300020581\|Ga0210399_10266204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300021171\|Ga0210405_10110547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2170	Open in IMG/M
3300021401\|Ga0210393_11322733	Not Available	577	Open in IMG/M
3300021403\|Ga0210397_11620032	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300021406\|Ga0210386_10026730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4520	Open in IMG/M
3300021406\|Ga0210386_10237900	Not Available	1551	Open in IMG/M
3300021474\|Ga0210390_11593885	Not Available	514	Open in IMG/M
3300021475\|Ga0210392_11028092	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021477\|Ga0210398_10725813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300021479\|Ga0210410_11269637	Not Available	629	Open in IMG/M
3300025320\|Ga0209171_10148071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1376	Open in IMG/M
3300025812\|Ga0208457_1080976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300025898\|Ga0207692_10237740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300025915\|Ga0207693_10050975	All Organisms → cellular organisms → Bacteria	3249	Open in IMG/M
3300025929\|Ga0207664_10142678	Not Available	2028	Open in IMG/M
3300025929\|Ga0207664_10689734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300025939\|Ga0207665_11437863	Not Available	549	Open in IMG/M
3300026324\|Ga0209470_1267095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300026529\|Ga0209806_1285390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300027829\|Ga0209773_10220290	Not Available	793	Open in IMG/M
3300027842\|Ga0209580_10152294	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300027854\|Ga0209517_10006391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14594	Open in IMG/M
3300027857\|Ga0209166_10542927	Not Available	594	Open in IMG/M
3300027879\|Ga0209169_10257630	Not Available	915	Open in IMG/M
3300027895\|Ga0209624_10349224	Not Available	986	Open in IMG/M
3300027905\|Ga0209415_10063839	All Organisms → cellular organisms → Bacteria	4483	Open in IMG/M
3300027908\|Ga0209006_10051954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3679	Open in IMG/M
3300027908\|Ga0209006_10065330	All Organisms → cellular organisms → Bacteria → Acidobacteria	3248	Open in IMG/M
3300027911\|Ga0209698_10006138	All Organisms → cellular organisms → Bacteria	12829	Open in IMG/M
3300027911\|Ga0209698_10302326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300028023\|Ga0265357_1039794	Not Available	550	Open in IMG/M
3300028780\|Ga0302225_10412543	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300028800\|Ga0265338_10114844	Not Available	2159	Open in IMG/M
3300030706\|Ga0310039_10092841	Not Available	1271	Open in IMG/M
3300030815\|Ga0265746_1033375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300031718\|Ga0307474_10133050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1870	Open in IMG/M
3300031823\|Ga0307478_10048525	All Organisms → cellular organisms → Bacteria	3141	Open in IMG/M
3300032174\|Ga0307470_10934291	Not Available	684	Open in IMG/M
3300032180\|Ga0307471_102233211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300032770\|Ga0335085_10981991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300032783\|Ga0335079_11064710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300032805\|Ga0335078_10327012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2047	Open in IMG/M
3300032892\|Ga0335081_11668358	Not Available	696	Open in IMG/M
3300032898\|Ga0335072_10355704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300032898\|Ga0335072_10708441	Not Available	983	Open in IMG/M
3300032954\|Ga0335083_10202818	Not Available	1813	Open in IMG/M
3300033887\|Ga0334790_055308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300033977\|Ga0314861_0103283	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300033977\|Ga0314861_0285067	Not Available	749	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.42%
Host-Associated	Host-Associated	4.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.81%
Aquatic	Environmental → Aquatic	20.61%
Plants	Host-Associated → Plants	4.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.28%
Freshwater	Environmental → Aquatic → Freshwater	12.98%
Sediment	Environmental → Aquatic → Sediment	5.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.29%
Peat	Environmental → Terrestrial → Peat	1.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.98%
Loam	Environmental → Terrestrial → Soil → Loam	12.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.34%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.58%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.58%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_06993840	2170459024	Grass Soil	TGTLYTDTTVANGNNYCYATTAVDSSSRESSYSNIVSNVKVPAL
AP72_2010_repI_A1DRAFT_10211802	3300000650	Forest Soil	TDSSVKNGSSYCYATTAVDTSNDESGYSNIVSNVQIPAQ*
JGI1027J11758_126793462	3300000789	Soil	LNTGTLYTDSSVANGSAYCFATTAVDTSNLESAYSNIVSNVKIPTQ*
JGI1027J12803_1031690642	3300000955	Soil	YTDTTVTNGNDYCYATTAVDSSSQESTYSNIVSNVQVPAN*
JGI12635J15846_104475282	3300001593	Forest Soil	AVVDGATYCYATTAVNTSNEESGYSNEVSNVQVPAP*
JGIcombinedJ26739_1012168893	3300002245	Forest Soil	YTDSVVTDGTSYCYATTAVNSSNQESSYSNIASNVQIPAP*
Ga0062386_1005722961	3300004152	Bog Forest Soil	LYVDANVADGTKYCYATTAVNTSSQESGYSNVVSNVQIPPP*
Ga0062386_1018585472	3300004152	Bog Forest Soil	ADRQVVDGTSYCYATAAVNSSNEQSDYSNIVSDVQVPAS*
Ga0062595_1000058502	3300004479	Soil	VLTTTTLYTDSNVVDGKSYCYAATAVNSSSQESGYSNIASNVQIPAP*
Ga0066676_107151682	3300005186	Soil	SVLTTTTLYTDSNVVDGKSYCYAATAVNSSSQESGYSNVASNVQIPAP*
Ga0073909_101632613	3300005526	Surface Soil	DTTVANGNNYCYATTAVDSSSQESTYSNIVSNVQVPAN*
Ga0070730_109389711	3300005537	Surface Soil	GTLYTDAAVTDGTSYCYAATAVNTSNAESGYSNIVSNIQIPAP*
Ga0070732_106728032	3300005542	Surface Soil	VDGTSYCYASTAVNTSNEESGYSNIVSNVQIPAP*
Ga0066703_102310541	3300005568	Soil	YSDFSVIDGTNYCYATTAVNSSNEESGYSNIVSDVRIPAP*
Ga0066702_102373413	3300005575	Soil	YSDNTVANATTYCYATTAVDTTNAESGDSNIVSNVAIP*
Ga0070763_109003422	3300005610	Soil	GLLYTDSNVVDGTSYCYAATAVNTSQEESSYSNIASNVQIPAP*
Ga0066903_1056714971	3300005764	Tropical Forest Soil	VTDGTAYCYAATAVNASNEESGYSNIVTDLQIPPP*
Ga0075288_10087672	3300005874	Rice Paddy Soil	FKINSVPITSTSYTDSEVGSGAAYCYATTAISTSGAESGYSNIVSSVQIPAS*
Ga0070766_110514761	3300005921	Soil	SSVTDGTNYCYATTAVNSSSEESGYSNIVSDVQIPPP*
Ga0075029_1000010418	3300006052	Watersheds	VVLDGTSYCYITNAVNSSNEESGCSNIAYNVQIPAP*
Ga0075017_1015767451	3300006059	Watersheds	TLYTDSVVVNGTSYCYATTAVDSSNQESGYSNIVSNVQIPAP*
Ga0075019_107407501	3300006086	Watersheds	GTLYTDSSVKNATSYCYATTAVDTSNVESGYSNIVSNVQIPVQ*
Ga0075030_1014915621	3300006162	Watersheds	NILDTLTTYTDSAVTDGTNYCYATTAVNSSSEESGYSNIVSDVQIPPP*
Ga0075014_1000455881	3300006174	Watersheds	NTSTLYTDSVVVDGTSYCYATTAVNSSNEESGYSNIVSNVQIPAP*
Ga0070765_1000212235	3300006176	Soil	SDSTVVDGASYCYAATAVNTSNEESGYSNIVSNIQIPPA*
Ga0070765_1010848823	3300006176	Soil	MNGSTLITLTTYSDSSVTDGTHYCYATTAVNSSSEESGYSNIVSDVQIPPP*
Ga0097621_1007869631	3300006237	Miscanthus Rhizosphere	YTDSSVANGKSYCYASTAVNTSNEESGYSNIVSNVQIPIS*
Ga0079222_122804962	3300006755	Agricultural Soil	TTTLYTDSNVVDGKSYCYAATAVNSSSQESGYSNIASNVQIPAQ*
Ga0075425_1031318221	3300006854	Populus Rhizosphere	TDSSVLDGTSYCFAVTAVDTSNEESTYSNVVANVQVP*
Ga0073928_112167051	3300006893	Iron-Sulfur Acid Spring	TTYSDSSVTDGTHYCYATTAVNSSSEESGYSNIVSDVQIPPP*
Ga0079219_110594071	3300006954	Agricultural Soil	VVDGKSYCYAATAVNSSSQESGYSNIASNVQIPAQ*
Ga0075435_1010316141	3300007076	Populus Rhizosphere	LYTDSNVVNGKSYCYATTAVNTSNEESSYSNIVSNVQIPLQ*
Ga0116137_10823213	3300009549	Peatland	PVTDGTNYCYATTAVNSSNEESGYSNIVSDVQIPAP*
Ga0116101_11991142	3300009759	Peatland	YTDSAVVDSATYCYATTAVNTSNEESAYSNVVSNVQVPAP*
Ga0116219_100087009	3300009824	Peatlands Soil	VDGTAYCYATTAVNSSNEESGYSNIVSNLQIPPP*
Ga0116219_108090672	3300009824	Peatlands Soil	YSDSSVTDGTKYCYATTAVNSSNEESGYSNIVSDVQIPPP*
Ga0126373_105369663	3300010048	Tropical Forest Soil	DSNVADGTSYCYATTAVNTSNEESGYSNIVSNVLVPVL*
Ga0126373_117611941	3300010048	Tropical Forest Soil	SSLIASTVYTDSVVVDGKSYCYATTAVNSSNEESGYSNIASNVQVPAP*
Ga0126373_127353403	3300010048	Tropical Forest Soil	TVYTDSKVTDGTAYCYAATAVNTSNEESGYSNIVSDLQIPPP*
Ga0074045_100849775	3300010341	Bog Forest Soil	LNTSMVYDDSLVVDGASYCYATTAVNSSNEESAYSNIVSDIQVPAP*
Ga0126370_124895621	3300010358	Tropical Forest Soil	MPIASTLYVDSEVKDGASYCYATTAIDTSDQESGYSNIVVDIQIPAS*
Ga0126378_106288722	3300010361	Tropical Forest Soil	SNVTDGTAYCYAATAVNASNEESGYSNIVSNLPIPPP*
Ga0126378_114185382	3300010361	Tropical Forest Soil	VYTDSVVVDGRSYCYATTAVNSSNEESSYPTIASDVQVPAP*
Ga0126379_101877791	3300010366	Tropical Forest Soil	VVDGKSYCYATTAVDSSGQESSYSNIASNVQIPAP*
Ga0126379_117196932	3300010366	Tropical Forest Soil	GTIYTDLSVVNGTSYCYTTTAVDSSNEESVYSNVVSNVQIP*
Ga0126381_1012346712	3300010376	Tropical Forest Soil	LYTDFAVTDGTSYCYATTAVNSSSEESNYSNIVFDVQIPLP*
Ga0126381_1013575671	3300010376	Tropical Forest Soil	MGTLYTDLSVTNGTSYCYASTAVNTSNEESVYSNVVSDIQV
Ga0126381_1023667492	3300010376	Tropical Forest Soil	LNPSTVYTDSNVTDGTAYCYAATAVNASNEESGYSNIVTDLQIPPP*
Ga0126381_1039995091	3300010376	Tropical Forest Soil	NVTDGTAYCYAATAVNASNEESGYSNIVSDLQIPPP*
Ga0136449_1014161443	3300010379	Peatlands Soil	LYMDSAVVDGATYCYATTAVNTSNAESGYSNVVSNVQVPAP*
Ga0126383_100871474	3300010398	Tropical Forest Soil	ANGNNYCYATTAVNTSNEESGYSNIVPNVQVPVL*
Ga0126383_106142601	3300010398	Tropical Forest Soil	LLNTSPTFTDSNVVDGTDYCYAATAVNTSNQESGYSNIVSDVQIPAP*
Ga0137776_13528212	3300010937	Sediment	DTLTTYTDSSVVDGTNYCYATTAVNSSNEESGYSNVVSDVQIPPP*
Ga0137381_113568922	3300012207	Vadose Zone Soil	TVTTYSDFSVIDGTNYCYAITAVNSSNEESGYSNIVSDVRIPAP*
Ga0137390_107149282	3300012363	Vadose Zone Soil	SSVVDGTNYCYATTAVNSSDEESAYSNIVSDVQIPAP*
Ga0164302_118900442	3300012961	Soil	AVVDGTNYCYAATAVDSSNAESSYSNIVSNVQIPAP*
Ga0181531_105764682	3300014169	Bog	SDGSVTDGTNYCYATTAVNSSNEESGYSNIVSNVQIPAP*
Ga0182024_103675382	3300014501	Permafrost	ITLTTYSDSSVTDGTNYCYATTAVNSSSEESGYSNVVSDVQIPPP*
Ga0182024_118131211	3300014501	Permafrost	VADGTNYCYATTAVNSSNEESGYSNIVTDVHIPAP*
Ga0132258_116799431	3300015371	Arabidopsis Rhizosphere	VKNGSSYCFATTAVDTSNVESGYSNIVSNVQIPAQ*
Ga0187854_101948551	3300017938	Peatland	GSTLDTVTTYSDSSVTDGANYCYATTAVNSSNEESGYSNVVSDVQIPSP
Ga0187817_104842562	3300017955	Freshwater Sediment	VVDGKAYCYASTAVNTSNEESTYSNIVSNVQIPAP
Ga0187779_100199644	3300017959	Tropical Peatland	YSDLVVTDGTSYCYATTAVNTSQEESGYSNIVSNVQIPAP
Ga0187781_100000271	3300017972	Tropical Peatland	TDNSVTDGSSYCYAATAVNASEEESGYSNIVSNVQIPAP
Ga0187781_109533531	3300017972	Tropical Peatland	ALNTSTVYADNTVVDGTSYCYATTAVNSSEEESGYSNIVSDVQVPAP
Ga0187782_101711641	3300017975	Tropical Peatland	TAYTDSNVTDGTAYCYAATAVNTSNEESGYSNIVSDVQIPAP
Ga0187782_110999832	3300017975	Tropical Peatland	GTAYTDSNVTDGTPYCYASTAVNTSNEESGYSNIVSDVQIPAP
Ga0187816_100285331	3300017995	Freshwater Sediment	SKINSALNATTSYTDSTVATGASYCYAATAVNTSDEESGYSNIVSDFLIP
Ga0187816_104354382	3300017995	Freshwater Sediment	GYTDSVVVDGTSYCYTTTAVNSSNQESAYSNIVSNVQIPAP
Ga0187816_105059241	3300017995	Freshwater Sediment	VTDGTNYCYATTAVNSSNEESGYSNIVSDVQIPPP
Ga0187804_102541161	3300018006	Freshwater Sediment	MDGTSCCYTTTAVNFSNKESGYANIVSNAQIPAPQS
Ga0187804_104601902	3300018006	Freshwater Sediment	VYTDSNVTDGTAYCYAATAVNTSNEESGYSNIVSDVQIPPP
Ga0187871_106385191	3300018042	Peatland	STVVDGASYCYAATAVNTSNEESGYSNIVSNIQIPPA
Ga0187859_101956881	3300018047	Peatland	QYADSGVTGGTSYCYATTAVNASNQESGYSNIVSDLQIPSP
Ga0187858_103897251	3300018057	Peatland	VTDGTSYCYATTAVNSSNEESGYSNVASNVQIPAP
Ga0187784_100770776	3300018062	Tropical Peatland	PSLNAGTAYTDSNVTDGTAYCYAATAVNTSNEESGYSNIVSDVQIPAP
Ga0187772_100481771	3300018085	Tropical Peatland	NVTDGTAYCYAATAVNTTNEESGFSNIVSDVQIPAP
Ga0187769_105947332	3300018086	Tropical Peatland	NTGTLYTDSEVVDGTSYCYAATTVNSSNEESGYSNIVSNVQIPAS
Ga0187770_117267802	3300018090	Tropical Peatland	STAYTDSAVAAGTSYCYATTAVNSSNEESAYSNIVINVAIPSS
Ga0066667_123500021	3300018433	Grasslands Soil	TDSSVVNGTSYCYASTAVNSSNEESSYSNIVSNVQIPTF
Ga0210407_100481861	3300020579	Soil	TLTTYADSSVADGTNYCYATTAVDSSKVESGYSNIVSDVQIPPP
Ga0210407_110046241	3300020579	Soil	NTGTLYTDSAVIDGATYCYATTAVNTSKEESGYSNVVSKVQVPAP
Ga0210399_102662042	3300020581	Soil	SSCGAYRKINGATLVSAMTYTDSAVTDGANYCYATTAVDSSNNEESGYSNVVSDVQIPPP
Ga0210405_101105471	3300021171	Soil	TDSAVVDGAMYCYATTAINTSNEESGYSNVVSNVQVPAP
Ga0210393_113227331	3300021401	Soil	LNTGTLFTDSVVADGSNYCYATTAVDSSNRESADSNIVLNVQIPMN
Ga0210397_116200322	3300021403	Soil	TVVDGASYCYAATAVNTSNEESGYSNIVSNIQIPPA
Ga0210386_100267301	3300021406	Soil	VVDGANYCYATTAVNTSNEESGYSNIASNVQVPAP
Ga0210386_102379001	3300021406	Soil	QLNTGLLYTDSNVVDGTSYCYAATAVNTSQEESSYSNIASNVQIPAP
Ga0210390_115938852	3300021474	Soil	PLLNTGTLFTDSAVVDGATYCYATTAVNTSNEESGYSNVVSNVQVPAP
Ga0210392_110280921	3300021475	Soil	LNTGTLYTDPAVVDGATYCYATTAVNTSNEESAYSNVVSNVQVPAP
Ga0210398_107258131	3300021477	Soil	WSDSSVTDGTNYCYATTAVNSSSEESGYSNIVSDVQIPPP
Ga0210410_112696371	3300021479	Soil	SLLNTGTLYTDSAVVDGATYCYATTAVNTSNEESGYSNVVSNVQVPAP
Ga0209171_101480711	3300025320	Iron-Sulfur Acid Spring	DSAVVDGATYCYATTAVNTSNEESGYSNVVSNVQVPAP
Ga0208457_10809761	3300025812	Peatland	DPSVTDGTNYCYATTAVNSTNEESGYSNIVSDVQIPAP
Ga0207692_102377402	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AELVPGTLYTDTGTSDGMSYCYATTAVNTSAEESGYSNIVSDIRIPPP
Ga0207693_100509751	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GSLDVNTVYTDSNIADGSSYCYATTAVDSSNQESSPSNIVSNVQVPAQ
Ga0207664_101426781	3300025929	Agricultural Soil	TDSSVANGKSYCYASTAVNTSNEESGYSNIVSNVQIPIS
Ga0207664_106897341	3300025929	Agricultural Soil	PTATYTDSEVTNGASYCYAATAVNVSKEESGYSNIVSNVQIPPN
Ga0207665_114378631	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DAAVTDGSSYCYAATAVNTSNAESGYSNIVSNIQIPAP
Ga0209470_12670951	3300026324	Soil	SVLTTTTLYTDSNVVDGKSYCYAATAVNSSSQESGYSNVASNVQIPAP
Ga0209806_12853901	3300026529	Soil	TTYSDFSVIDGTNYCYATTAVNSSNEESGYSNIVSDVRIPAP
Ga0209773_102202901	3300027829	Bog Forest Soil	YTLNASTLYTDSEVTDGASYCYAATTVNTRNEESGYSNIAIDVQIPPP
Ga0209580_101522941	3300027842	Surface Soil	AYTDSLVTDGTNYCYATTAVDSSNVESGYSNIVINVQIPPP
Ga0209517_100063911	3300027854	Peatlands Soil	SVVVDGTSYCYATTAVNSSSQESGYSNIVSNVQIPPP
Ga0209166_105429271	3300027857	Surface Soil	LYTDAAVTDGTSYCYAATAVNTSNAESGYSNIVSNIQIPAP
Ga0209169_102576302	3300027879	Soil	DSGVTDGTSYCYATTAVDSNNLESAYSNIVSNLQIPAP
Ga0209624_103492241	3300027895	Forest Soil	AVVDRATYCYATTAVNTTNEESGYSNVVSNVQVPAP
Ga0209415_100638391	3300027905	Peatlands Soil	SVVVDGAKYCYDTTAVNTSSEESGYSNVVSNVQVPAP
Ga0209006_100519544	3300027908	Forest Soil	MNGSALITLTTYSDSSVTDGTNYCYATTAVNSSSEESGYSNIVSDVQIPPP
Ga0209006_100653303	3300027908	Forest Soil	DTATTYSDSSVIDGTNYCYATTAVNSSNEESGFSNVVSDVQIPAP
Ga0209698_100061388	3300027911	Watersheds	VVLDGTSYCYITNAVNSSNEESGCSNIAYNVQIPAP
Ga0209698_103023262	3300027911	Watersheds	DSGVVDGTAYCYASTAVNTSNEESGYSNIVSNIQIPPP
Ga0265357_10397942	3300028023	Rhizosphere	TYTDSSVADGTNYCYATTAVDSSKAESGYSNIVSDVQIPPP
Ga0302225_104125431	3300028780	Palsa	GAILEVATEYNDLSVTYGTNYCYATTAVNSSNEESGYSNIVSDVQIPPP
Ga0265338_101148442	3300028800	Rhizosphere	VVDGASYCYASTAVNTSNEESGYSNIVSNVQIPTS
Ga0310039_100928412	3300030706	Peatlands Soil	TDSGVINSTSYCYATTAVDSTNEESGYSNIVSNIQIPVS
Ga0265746_10333752	3300030815	Soil	TAYVDSSVADHMNYCYATTAVNSSNEESGYSNIVANVQIP
Ga0307474_101330501	3300031718	Hardwood Forest Soil	DSVVIDGTSYCYATTAVNTDNGESGYSNIVSNVQIPAP
Ga0307478_100485254	3300031823	Hardwood Forest Soil	VVDGATYCYATTAVNTSNEESAYSNVVSNVQVPAP
Ga0307470_109342911	3300032174	Hardwood Forest Soil	LLDTSTLYTDSSVTNSSVYCYATTAVDTSNVESGYSNVVSNVQIPTQ
Ga0307471_1022332111	3300032180	Hardwood Forest Soil	ALDRVTTYSDFSVIDGTNYCYATTAVNSSNEESGYSNIVSDVRIPAP
Ga0335085_109819911	3300032770	Soil	LVVNGTSYCYATTAVDSSNQESGYSNIVSNVQIPIQ
Ga0335079_110647101	3300032783	Soil	VVTDGDAYCYAATAVNSSNEESGYSNIVSDVQIPPP
Ga0335078_103270121	3300032805	Soil	LYTDSNVVDGSSYCYATTAVNTSNEESGYSNIVSNVQIPAP
Ga0335081_116683581	3300032892	Soil	DSTVANGSSYCYYATAVNTSSQESGASNIATNVQIP
Ga0335072_103557041	3300032898	Soil	DYTDSVVTDGTSYCYYATAVNSSNQESAPSNTVPNVQIPAP
Ga0335072_107084411	3300032898	Soil	DSTVANSTNYCYAATAVNTSNEESGYSNIVSNVQIP
Ga0335083_102028181	3300032954	Soil	IVVDGTSYCYAATAVNSSNEESSYSNIVSNLQIPPP
Ga0334790_055308_1_144	3300033887	Soil	MLDTLTTYTDSAVTDGTNYCYATTAVNSSNEESGYSNIVTDVQIPPP
Ga0314861_0103283_1313_1450	3300033977	Peatland	NTSTLYTDSSVTDGTSYCYAATTVNSSQEESGYSNIVSDVQIPPP
Ga0314861_0285067_630_749	3300033977	Peatland	TDSAVTDGDAYCYAATAVNSSDEESGYSNIVSDVQIPAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062075

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences